Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0280007728.01.T01 | AES64817.2 | 71.403 | 549 | 104 | 6 | 20 | 530 | 116 | 649 | 0 | 733 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0280007728.01.T01 | Q9M9P4 | 33.725 | 510 | 256 | 20 | 81 | 530 | 208 | 695 | 1.90E-60 | 214 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0280007728.01.T01 | G7IKY6 | 71.403 | 549 | 104 | 6 | 20 | 530 | 116 | 649 | 0.0 | 733 |
Gene ID | Type | Classification |
---|---|---|
MsG0280007728.01.T01 | TF | HB-HD-ZIP |
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0280007728.01.T01 | MTR_2g030660 | 65.224 | 624 | 104 | 7 | 8 | 530 | 38 | 649 | 0.0 | 740 |
MsG0280007728.01.T01 | MTR_2g030690 | 81.362 | 279 | 29 | 1 | 275 | 530 | 1 | 279 | 7.55e-159 | 453 |
MsG0280007728.01.T01 | MTR_2g030570 | 34.483 | 522 | 262 | 15 | 68 | 530 | 197 | 697 | 3.39e-72 | 243 |
MsG0280007728.01.T01 | MTR_6g477820 | 30.769 | 546 | 283 | 18 | 61 | 528 | 195 | 723 | 5.19e-68 | 233 |
MsG0280007728.01.T01 | MTR_2g030600 | 33.852 | 514 | 271 | 18 | 68 | 530 | 195 | 690 | 5.37e-67 | 229 |
MsG0280007728.01.T01 | MTR_7g427710 | 30.449 | 624 | 313 | 25 | 5 | 528 | 36 | 638 | 2.91e-59 | 207 |
MsG0280007728.01.T01 | MTR_2g030710 | 63.584 | 173 | 21 | 3 | 345 | 494 | 87 | 240 | 5.41e-53 | 180 |
MsG0280007728.01.T01 | MTR_7g076080 | 28.491 | 530 | 308 | 16 | 53 | 528 | 262 | 774 | 6.28e-48 | 178 |
MsG0280007728.01.T01 | MTR_2g088470 | 29.779 | 497 | 291 | 13 | 76 | 528 | 250 | 732 | 1.55e-46 | 173 |
MsG0280007728.01.T01 | MTR_8g432540 | 30.350 | 514 | 276 | 20 | 77 | 528 | 313 | 806 | 2.66e-46 | 173 |
MsG0280007728.01.T01 | MTR_4g047800 | 29.528 | 508 | 285 | 16 | 76 | 528 | 240 | 729 | 4.79e-46 | 172 |
MsG0280007728.01.T01 | MTR_5g029320 | 29.307 | 505 | 271 | 23 | 83 | 520 | 286 | 771 | 3.71e-45 | 170 |
MsG0280007728.01.T01 | MTR_5g005600 | 29.890 | 455 | 236 | 16 | 135 | 529 | 286 | 717 | 2.74e-43 | 164 |
MsG0280007728.01.T01 | MTR_1g101280 | 27.447 | 521 | 296 | 18 | 70 | 528 | 250 | 750 | 1.21e-39 | 154 |
MsG0280007728.01.T01 | MTR_2g101720 | 28.340 | 494 | 282 | 18 | 89 | 528 | 314 | 789 | 5.39e-39 | 152 |
MsG0280007728.01.T01 | MTR_7g427690 | 31.267 | 371 | 202 | 13 | 81 | 415 | 60 | 413 | 5.47e-39 | 148 |
MsG0280007728.01.T01 | MTR_0198s0030 | 28.180 | 511 | 284 | 23 | 81 | 528 | 261 | 751 | 1.37e-36 | 145 |
MsG0280007728.01.T01 | MTR_2g083350 | 25.618 | 445 | 268 | 13 | 134 | 530 | 109 | 538 | 3.40e-28 | 118 |
MsG0280007728.01.T01 | MTR_0653s0020 | 30.409 | 171 | 99 | 3 | 258 | 415 | 8 | 171 | 2.30e-22 | 95.5 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0280007728.01.T01 | AT3G03260 | 33.725 | 510 | 256 | 20 | 81 | 530 | 208 | 695 | 1.94e-61 | 214 |
MsG0280007728.01.T01 | AT1G34650 | 33.465 | 505 | 273 | 14 | 73 | 530 | 218 | 706 | 9.46e-61 | 213 |
MsG0280007728.01.T01 | AT1G73360 | 30.989 | 526 | 297 | 16 | 52 | 528 | 205 | 713 | 6.32e-60 | 211 |
MsG0280007728.01.T01 | AT1G17920 | 30.957 | 533 | 290 | 17 | 53 | 528 | 170 | 681 | 1.70e-59 | 209 |
MsG0280007728.01.T01 | AT1G17920 | 30.957 | 533 | 290 | 17 | 53 | 528 | 170 | 681 | 1.70e-59 | 209 |
MsG0280007728.01.T01 | AT5G17320 | 31.481 | 540 | 292 | 19 | 49 | 528 | 194 | 715 | 2.75e-59 | 209 |
MsG0280007728.01.T01 | AT1G05230 | 30.785 | 497 | 275 | 16 | 76 | 528 | 243 | 714 | 2.11e-49 | 181 |
MsG0280007728.01.T01 | AT1G05230 | 30.522 | 498 | 277 | 16 | 76 | 528 | 243 | 716 | 6.67e-49 | 180 |
MsG0280007728.01.T01 | AT1G05230 | 30.522 | 498 | 277 | 16 | 76 | 528 | 243 | 716 | 6.67e-49 | 180 |
MsG0280007728.01.T01 | AT1G05230 | 30.522 | 498 | 277 | 16 | 76 | 528 | 243 | 716 | 6.67e-49 | 180 |
MsG0280007728.01.T01 | AT1G05230 | 30.522 | 498 | 277 | 16 | 76 | 528 | 243 | 716 | 6.67e-49 | 180 |
MsG0280007728.01.T01 | AT1G05230 | 30.522 | 498 | 277 | 16 | 76 | 528 | 243 | 716 | 6.67e-49 | 180 |
MsG0280007728.01.T01 | AT1G05230 | 30.522 | 498 | 277 | 16 | 76 | 528 | 243 | 716 | 6.67e-49 | 180 |
MsG0280007728.01.T01 | AT1G05230 | 30.522 | 498 | 277 | 16 | 76 | 528 | 243 | 716 | 6.67e-49 | 180 |
MsG0280007728.01.T01 | AT1G05230 | 30.522 | 498 | 277 | 16 | 76 | 528 | 243 | 716 | 6.67e-49 | 180 |
MsG0280007728.01.T01 | AT1G05230 | 30.522 | 498 | 277 | 16 | 76 | 528 | 243 | 716 | 6.67e-49 | 180 |
MsG0280007728.01.T01 | AT1G05230 | 30.522 | 498 | 277 | 16 | 76 | 528 | 243 | 716 | 6.67e-49 | 180 |
MsG0280007728.01.T01 | AT4G21750 | 29.231 | 520 | 285 | 13 | 76 | 528 | 254 | 757 | 1.01e-48 | 180 |
MsG0280007728.01.T01 | AT4G21750 | 29.231 | 520 | 285 | 13 | 76 | 528 | 254 | 757 | 1.01e-48 | 180 |
MsG0280007728.01.T01 | AT4G21750 | 29.231 | 520 | 285 | 13 | 76 | 528 | 254 | 757 | 1.01e-48 | 180 |
MsG0280007728.01.T01 | AT4G21750 | 29.231 | 520 | 285 | 13 | 76 | 528 | 254 | 757 | 1.01e-48 | 180 |
MsG0280007728.01.T01 | AT4G04890 | 30.019 | 513 | 277 | 17 | 76 | 528 | 245 | 735 | 1.34e-47 | 177 |
MsG0280007728.01.T01 | AT4G04890 | 30.019 | 513 | 277 | 17 | 76 | 528 | 245 | 735 | 1.34e-47 | 177 |
MsG0280007728.01.T01 | AT4G00730 | 30.495 | 505 | 273 | 20 | 78 | 528 | 318 | 798 | 9.85e-45 | 169 |
MsG0280007728.01.T01 | AT3G61150 | 28.782 | 542 | 300 | 20 | 56 | 528 | 279 | 803 | 1.33e-42 | 162 |
MsG0280007728.01.T01 | AT3G03260 | 36.949 | 295 | 148 | 10 | 81 | 352 | 208 | 487 | 8.33e-41 | 155 |
MsG0280007728.01.T01 | AT2G32370 | 27.033 | 492 | 286 | 18 | 80 | 522 | 248 | 715 | 1.14e-40 | 156 |
MsG0280007728.01.T01 | AT5G46880 | 30.942 | 446 | 237 | 18 | 136 | 530 | 383 | 808 | 2.30e-38 | 150 |
MsG0280007728.01.T01 | AT5G46880 | 30.942 | 446 | 237 | 18 | 136 | 530 | 383 | 808 | 2.30e-38 | 150 |
MsG0280007728.01.T01 | AT5G46880 | 30.942 | 446 | 237 | 18 | 136 | 530 | 383 | 808 | 2.30e-38 | 150 |
MsG0280007728.01.T01 | AT4G17710 | 27.987 | 611 | 334 | 23 | 9 | 530 | 112 | 705 | 1.48e-37 | 147 |
MsG0280007728.01.T01 | AT1G79840 | 28.144 | 501 | 277 | 20 | 89 | 528 | 206 | 684 | 1.92e-36 | 144 |
MsG0280007728.01.T01 | AT1G79840 | 28.144 | 501 | 277 | 20 | 89 | 528 | 206 | 684 | 1.92e-36 | 144 |
MsG0280007728.01.T01 | AT1G79840 | 28.144 | 501 | 277 | 20 | 89 | 528 | 264 | 742 | 2.31e-36 | 144 |
MsG0280007728.01.T01 | AT1G79840 | 28.144 | 501 | 277 | 20 | 89 | 528 | 293 | 771 | 3.29e-36 | 144 |
MsG0280007728.01.T01 | AT5G52170 | 24.723 | 631 | 331 | 22 | 9 | 528 | 81 | 678 | 5.07e-36 | 142 |
MsG0280007728.01.T01 | AT5G52170 | 24.723 | 631 | 331 | 22 | 9 | 528 | 81 | 678 | 5.07e-36 | 142 |
MsG0280007728.01.T01 | AT5G52170 | 24.564 | 631 | 337 | 20 | 9 | 528 | 81 | 683 | 1.04e-35 | 142 |
MsG0280007728.01.T01 | AT1G05230 | 29.351 | 385 | 209 | 11 | 76 | 419 | 243 | 605 | 7.31e-33 | 133 |
MsG0280007728.01.T01 | AT4G25530 | 23.269 | 520 | 323 | 19 | 60 | 528 | 188 | 682 | 2.68e-25 | 110 |
MsG0280007728.01.T01 | AT1G79840 | 26.667 | 375 | 207 | 13 | 89 | 413 | 264 | 620 | 1.90e-22 | 101 |
MsG0280007728.01.T01 | AT4G00730 | 31.276 | 243 | 129 | 9 | 78 | 300 | 318 | 542 | 1.25e-18 | 89.7 |
MsG0280007728.01.T01 | AT1G79840 | 26.971 | 241 | 130 | 10 | 89 | 301 | 264 | 486 | 1.78e-11 | 67.0 |
Find 102 sgRNAs with CRISPR-Local
Find 195 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ATTTATTAGTACTTGAAATT+AGG | 0.135885 | 2:+19712702 | MsG0280007728.01.T01:intron |
ACATTTGGTCGACATGTTTC+TGG | 0.149362 | 2:+19712531 | MsG0280007728.01.T01:CDS |
AATAATCTTCACACCATCTT+TGG | 0.210210 | 2:-19714681 | None:intergenic |
TTTATTAGTACTTGAAATTA+GGG | 0.216055 | 2:+19712703 | MsG0280007728.01.T01:intron |
TTCAACTCTTGTGTGTTTAC+AGG | 0.236305 | 2:-19714749 | None:intergenic |
GAAGTTCCATGAGCCATCTT+TGG | 0.238463 | 2:-19713319 | None:intergenic |
AGAGTTGACCACTACTTTAA+TGG | 0.241174 | 2:+19712453 | MsG0280007728.01.T01:CDS |
GATTCACAAATGGTGAAAAT+TGG | 0.281622 | 2:+19712502 | MsG0280007728.01.T01:CDS |
GTCAACAATGCTATTGCATT+TGG | 0.284967 | 2:+19713293 | MsG0280007728.01.T01:CDS |
GTGGCTCAAGCTCAAGCTCC+TGG | 0.323796 | 2:-19711710 | None:intergenic |
CCACTATGTATCAATTATTC+AGG | 0.339498 | 2:+19713957 | MsG0280007728.01.T01:CDS |
TCCTCTTTCAAGCACTTTGA+TGG | 0.342907 | 2:-19712790 | None:intergenic |
AAGTTCCATGAGCCATCTTT+GGG | 0.351674 | 2:-19713318 | None:intergenic |
AGAATGTTTCATAGACCCTT+TGG | 0.370185 | 2:+19714706 | MsG0280007728.01.T01:CDS |
TGAACCTCAAAACGTCTTGC+CGG | 0.371480 | 2:-19713777 | None:intergenic |
GGTCGACATGTTTCTGGATT+CGG | 0.374726 | 2:+19712537 | MsG0280007728.01.T01:CDS |
AAGCTCCACTTTGACTTTCT+GGG | 0.379501 | 2:-19712816 | None:intergenic |
TCAGCTTTGCTAACAATAGT+TGG | 0.380163 | 2:-19712765 | None:intergenic |
AACATGCTCTACTTAATTAG+TGG | 0.387024 | 2:+19714993 | MsG0280007728.01.T01:CDS |
CTCATGGAACTTCAAAGAAT+TGG | 0.391578 | 2:+19713329 | MsG0280007728.01.T01:CDS |
TTTCCGCGATGAGTCCTTAT+GGG | 0.399067 | 2:+19712372 | MsG0280007728.01.T01:CDS |
AGTCCAGCCACCAACATCAT+TGG | 0.401935 | 2:-19712322 | None:intergenic |
ATTACACATCTCCTTCCTTC+AGG | 0.404458 | 2:-19713529 | None:intergenic |
ATAATCTTCACACCATCTTT+GGG | 0.405420 | 2:-19714680 | None:intergenic |
GAAAATTGGAGCAAGACATT+TGG | 0.407628 | 2:+19712516 | MsG0280007728.01.T01:CDS |
AAACACACAAGAGTTGAATA+TGG | 0.410220 | 2:+19714754 | MsG0280007728.01.T01:CDS |
AAATTCCCGTGGTTTCATAA+AGG | 0.417914 | 2:-19712958 | None:intergenic |
GAATGTTTCATAGACCCTTT+GGG | 0.421156 | 2:+19714707 | MsG0280007728.01.T01:CDS |
ACTTGCACATCAGGTTGTTA+AGG | 0.426416 | 2:+19713555 | MsG0280007728.01.T01:CDS |
TGTAATGAAACTTGCACATC+AGG | 0.446823 | 2:+19713546 | MsG0280007728.01.T01:CDS |
GTCCAGCCACCAACATCATT+GGG | 0.447296 | 2:-19712321 | None:intergenic |
CTCTTATGATTACTTGAAAG+AGG | 0.447977 | 2:+19713037 | MsG0280007728.01.T01:CDS |
CACTGTCAGCAACGAACCTC+TGG | 0.459310 | 2:-19714873 | None:intergenic |
TTAAAGTAGTGGTCAACTCT+AGG | 0.461640 | 2:-19712450 | None:intergenic |
TTTCGACTTCTTAAGAGATC+CGG | 0.468769 | 2:+19713758 | MsG0280007728.01.T01:CDS |
AACCACCACTTCACTTGTTG+TGG | 0.474712 | 2:-19711729 | None:intergenic |
GAAATTGCACACATCTCTAC+TGG | 0.475230 | 2:+19713922 | MsG0280007728.01.T01:CDS |
GTGTCACTTATAATTCCATC+AGG | 0.478904 | 2:+19714803 | MsG0280007728.01.T01:CDS |
GCTGATGCTGAGATGACAGC+GGG | 0.480286 | 2:+19713631 | MsG0280007728.01.T01:CDS |
TTGCATTTGGAGCCCAAAGA+TGG | 0.489863 | 2:+19713306 | MsG0280007728.01.T01:CDS |
TGAGCCTCTATCTAGATTCA+AGG | 0.490503 | 2:-19712269 | None:intergenic |
CCCTCCTTGAATCTAGATAG+AGG | 0.493740 | 2:+19712265 | MsG0280007728.01.T01:CDS |
TATGATTACTTGAAAGAGGA+TGG | 0.498521 | 2:+19713041 | MsG0280007728.01.T01:CDS |
GTGACACATTTGATAAATCA+TGG | 0.499449 | 2:-19714787 | None:intergenic |
AATAATTGATACATAGTGGT+TGG | 0.500783 | 2:-19713953 | None:intergenic |
AGCTCCACTTTGACTTTCTG+GGG | 0.503083 | 2:-19712815 | None:intergenic |
CTAGTTTCTCCTCCCAAAGA+TGG | 0.503991 | 2:+19714668 | MsG0280007728.01.T01:CDS |
GATTCAAAATTTGCAACAAG+AGG | 0.507082 | 2:-19714920 | None:intergenic |
TTGGATTGAGCATGTGGAAG+TGG | 0.507994 | 2:+19713232 | MsG0280007728.01.T01:CDS |
AAATTTGCAACAAGAGGACT+AGG | 0.517166 | 2:-19714914 | None:intergenic |
CCTGAATAATTGATACATAG+TGG | 0.522975 | 2:-19713957 | None:intergenic |
ATCATCAAAAGATTCACAAA+TGG | 0.526011 | 2:+19712492 | MsG0280007728.01.T01:CDS |
TGGCTCAAGCTCAAGCTCCT+GGG | 0.527865 | 2:-19711709 | None:intergenic |
ACCATCAAAGTGCTTGAAAG+AGG | 0.530221 | 2:+19712789 | MsG0280007728.01.T01:CDS |
AACCCAATGATGTTGGTGGC+TGG | 0.530454 | 2:+19712319 | MsG0280007728.01.T01:CDS |
TAAAGTAGTGGTCAACTCTA+GGG | 0.531595 | 2:-19712449 | None:intergenic |
AAGCTGAGACTTAACCCATA+AGG | 0.535338 | 2:-19712386 | None:intergenic |
TGGAGCCCAAAGATGGCTCA+TGG | 0.538769 | 2:+19713313 | MsG0280007728.01.T01:CDS |
TACAAGTTGAAGCTGGTATG+TGG | 0.546205 | 2:+19713000 | MsG0280007728.01.T01:CDS |
TTTGATGATTCAACATGTGT+TGG | 0.552563 | 2:-19712478 | None:intergenic |
ATTAGTACTTGAAATTAGGG+TGG | 0.557112 | 2:+19712706 | MsG0280007728.01.T01:intron |
GGTTTCTTGGATTGAGCATG+TGG | 0.560486 | 2:+19713226 | MsG0280007728.01.T01:intron |
ATAATTGATACATAGTGGTT+GGG | 0.560512 | 2:-19713952 | None:intergenic |
AATACAAAACCCAATGATGT+TGG | 0.560670 | 2:+19712312 | MsG0280007728.01.T01:CDS |
ATGTGTGCAATTTCATGCCA+TGG | 0.566418 | 2:-19713913 | None:intergenic |
AAGTCGAAAACAATATGAGC+GGG | 0.570284 | 2:-19713744 | None:intergenic |
GAGTTGAATATGGCAATGAA+TGG | 0.573412 | 2:+19714764 | MsG0280007728.01.T01:CDS |
CTCTATCTAGATTCAAGGAG+GGG | 0.576715 | 2:-19712264 | None:intergenic |
TTTCACCTTTATGAAACCAC+GGG | 0.580094 | 2:+19712953 | MsG0280007728.01.T01:CDS |
GGTTTCAAAACAAAGAGCAC+AGG | 0.585847 | 2:+19711748 | MsG0280007728.01.T01:CDS |
AAAACAATATGAGCGGGAGG+AGG | 0.586895 | 2:-19713738 | None:intergenic |
TTATGCTACGTACAGATGCA+TGG | 0.588414 | 2:+19712916 | MsG0280007728.01.T01:CDS |
GGTGGCTGGACTTGCCGCCA+CGG | 0.591534 | 2:+19712333 | MsG0280007728.01.T01:CDS |
CAGAGGTTCGTTGCTGACAG+TGG | 0.595573 | 2:+19714874 | MsG0280007728.01.T01:CDS |
AAACAACATAGGATCCCAAA+GGG | 0.596630 | 2:-19714721 | None:intergenic |
AGCCACAACAAGTGAAGTGG+TGG | 0.600152 | 2:+19711727 | MsG0280007728.01.T01:CDS |
CTTTCACCTTTATGAAACCA+CGG | 0.603679 | 2:+19712952 | MsG0280007728.01.T01:CDS |
TATTGCGTACAAGTTGAAGC+TGG | 0.606947 | 2:+19712993 | MsG0280007728.01.T01:CDS |
TCAGTGGTTACATTACCTGA+AGG | 0.618247 | 2:+19713514 | MsG0280007728.01.T01:intron |
ATCTTCACACCATCTTTGGG+AGG | 0.621836 | 2:-19714677 | None:intergenic |
TACAGGAGAATAAACAACAT+AGG | 0.623592 | 2:-19714732 | None:intergenic |
CGAAGAAAGTAAAATTCCCG+TGG | 0.624894 | 2:-19712969 | None:intergenic |
TGTTGGCGCCATTAAAGTAG+TGG | 0.625434 | 2:-19712461 | None:intergenic |
TGGTTACATTACCTGAAGGA+AGG | 0.625611 | 2:+19713518 | MsG0280007728.01.T01:CDS |
AAGCTTAAGCAACTCTTCCG+TGG | 0.628294 | 2:-19712350 | None:intergenic |
TTGAGCCACAACAAGTGAAG+TGG | 0.628334 | 2:+19711724 | MsG0280007728.01.T01:CDS |
AGCGGGAGGAGGTATCAAAA+CGG | 0.629339 | 2:-19713727 | None:intergenic |
TAAACAACATAGGATCCCAA+AGG | 0.631648 | 2:-19714722 | None:intergenic |
TCAGCATCAGCAAAGTATTG+TGG | 0.632074 | 2:-19713619 | None:intergenic |
ACAAAACCCAATGATGTTGG+TGG | 0.641799 | 2:+19712315 | MsG0280007728.01.T01:CDS |
TCAAAAGATAGTAAATCCAG+AGG | 0.643636 | 2:+19714857 | MsG0280007728.01.T01:CDS |
CCTCTATCTAGATTCAAGGA+GGG | 0.645126 | 2:-19712265 | None:intergenic |
GAAGTCGAAAACAATATGAG+CGG | 0.647871 | 2:-19713745 | None:intergenic |
GCCTCTATCTAGATTCAAGG+AGG | 0.649988 | 2:-19712266 | None:intergenic |
CTTCCTAAAAGCTTGACACG+TGG | 0.650326 | 2:+19712238 | MsG0280007728.01.T01:CDS |
ACAAGTTGAAGCTGGTATGT+GGG | 0.664498 | 2:+19713001 | MsG0280007728.01.T01:CDS |
TCGAAAACAATATGAGCGGG+AGG | 0.669266 | 2:-19713741 | None:intergenic |
TGCTGATGCTGAGATGACAG+CGG | 0.682409 | 2:+19713630 | MsG0280007728.01.T01:CDS |
CTTAAGCAACTCTTCCGTGG+CGG | 0.730831 | 2:-19712347 | None:intergenic |
TCTTTGGGAGGAGAAACTAG+AGG | 0.742226 | 2:-19714665 | None:intergenic |
TAACCCATAAGGACTCATCG+CGG | 0.774250 | 2:-19712375 | None:intergenic |
CTGATGCTGAGATGACAGCG+GGG | 0.824043 | 2:+19713632 | MsG0280007728.01.T01:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ACTTTATATATATAAAAATG+TGG | - | Chr2:19714531-19714550 | None:intergenic | 10.0% |
!! | ATTCTCTTATAAATAAAATA+TGG | - | Chr2:19713989-19714008 | None:intergenic | 10.0% |
!! | AAAGTTTCATAAAATACAAT+AGG | + | Chr2:19714546-19714565 | MsG0280007728.01.T01:intron | 15.0% |
!! | ATTAGTATGTTATATCAATT+AGG | - | Chr2:19711833-19711852 | None:intergenic | 15.0% |
!! | ATTTATTAGTACTTGAAATT+AGG | + | Chr2:19712702-19712721 | MsG0280007728.01.T01:intron | 15.0% |
!! | GAATACTAAAGAAAATTATA+AGG | - | Chr2:19713452-19713471 | None:intergenic | 15.0% |
!! | TTAGTATGTTATATCAATTA+GGG | - | Chr2:19711832-19711851 | None:intergenic | 15.0% |
!! | TTAGTTTAATAGGTAAATAA+TGG | - | Chr2:19713422-19713441 | None:intergenic | 15.0% |
!! | TTTATTAGTACTTGAAATTA+GGG | + | Chr2:19712703-19712722 | MsG0280007728.01.T01:intron | 15.0% |
!!! | AATTTTTTTTTCTTTCTATG+TGG | + | Chr2:19714637-19714656 | MsG0280007728.01.T01:intron | 15.0% |
!!! | AGAAACATATGTTTATTTTT+AGG | + | Chr2:19713205-19713224 | MsG0280007728.01.T01:intron | 15.0% |
!! | TTCAAAATTTAGGCTTATTA+GGG | + | Chr2:19714192-19714211 | MsG0280007728.01.T01:intron | 20.0% |
!! | TTTCAAAATTTAGGCTTATT+AGG | + | Chr2:19714191-19714210 | MsG0280007728.01.T01:intron | 20.0% |
!!! | AATTTTCTGTCTAGAAAAAA+TGG | + | Chr2:19712731-19712750 | MsG0280007728.01.T01:CDS | 20.0% |
!!! | ACAAAAGTACAAGAATAAAA+GGG | - | Chr2:19714230-19714249 | None:intergenic | 20.0% |
!!! | ATGTTTATTTTTAGGTTTCT+TGG | + | Chr2:19713213-19713232 | MsG0280007728.01.T01:intron | 20.0% |
!!! | ATTTTCTGTCTAGAAAAAAT+GGG | + | Chr2:19712732-19712751 | MsG0280007728.01.T01:CDS | 20.0% |
!!! | TACAAAAGTACAAGAATAAA+AGG | - | Chr2:19714231-19714250 | None:intergenic | 20.0% |
!!! | TAGGATTGTTTCAATTATTT+TGG | + | Chr2:19714160-19714179 | MsG0280007728.01.T01:intron | 20.0% |
!!! | TTCATTTATATACTTTTCAG+TGG | + | Chr2:19713498-19713517 | MsG0280007728.01.T01:intron | 20.0% |
!!! | TTGAATTTTGATAACATGTT+AGG | + | Chr2:19712892-19712911 | MsG0280007728.01.T01:intron | 20.0% |
!!! | TTTTGATGTGTAATTTGTTT+AGG | + | Chr2:19714602-19714621 | MsG0280007728.01.T01:intron | 20.0% |
! | AAGAAAAATACTCCATTTGA+AGG | - | Chr2:19712859-19712878 | None:intergenic | 25.0% |
! | AATAATTGATACATAGTGGT+TGG | - | Chr2:19713956-19713975 | None:intergenic | 25.0% |
! | ACATACAAAAACACAAGTTA+GGG | + | Chr2:19714496-19714515 | MsG0280007728.01.T01:intron | 25.0% |
! | ATAATTGATACATAGTGGTT+GGG | - | Chr2:19713955-19713974 | None:intergenic | 25.0% |
! | ATCATCAAAAGATTCACAAA+TGG | + | Chr2:19712492-19712511 | MsG0280007728.01.T01:CDS | 25.0% |
! | TAGCAACAATAACAATGAAT+GGG | - | Chr2:19713704-19713723 | None:intergenic | 25.0% |
! | TATTAGGATCATTACATGAT+TGG | - | Chr2:19711992-19712011 | None:intergenic | 25.0% |
! | TATTATATACGTACTAACCT+TGG | - | Chr2:19713131-19713150 | None:intergenic | 25.0% |
! | TGATCTCAATAAAATCATTG+TGG | - | Chr2:19712589-19712608 | None:intergenic | 25.0% |
! | TGTCAAGTCAATAAATGAAT+CGG | - | Chr2:19714429-19714448 | None:intergenic | 25.0% |
!! | AATTCTTTTCAGTATGATGA+TGG | + | Chr2:19712158-19712177 | MsG0280007728.01.T01:intron | 25.0% |
!! | AGGAGTTTTCTTAGTTTAAT+AGG | - | Chr2:19713432-19713451 | None:intergenic | 25.0% |
!! | ATTCTTTTCAGTATGATGAT+GGG | + | Chr2:19712159-19712178 | MsG0280007728.01.T01:intron | 25.0% |
!! | CAAAAGTACAAGAATAAAAG+GGG | - | Chr2:19714229-19714248 | None:intergenic | 25.0% |
!! | GTTAATTATTTTCATGCAGT+GGG | + | Chr2:19713870-19713889 | MsG0280007728.01.T01:intron | 25.0% |
!! | TAATAGTTTGAAACAACTTC+AGG | + | Chr2:19712007-19712026 | MsG0280007728.01.T01:intron | 25.0% |
!! | TACAAGCATTTTTATGACAA+TGG | + | Chr2:19713380-19713399 | MsG0280007728.01.T01:CDS | 25.0% |
!! | TATGTTCATTTGAAATGACA+TGG | - | Chr2:19714092-19714111 | None:intergenic | 25.0% |
!! | TGAAGTTGTTTCAAACTATT+AGG | - | Chr2:19712008-19712027 | None:intergenic | 25.0% |
!! | TGTTAATTATTTTCATGCAG+TGG | + | Chr2:19713869-19713888 | MsG0280007728.01.T01:intron | 25.0% |
!! | TTGGTATATTTTCCTTCAAA+TGG | + | Chr2:19712844-19712863 | MsG0280007728.01.T01:intron | 25.0% |
!!! | AAGCCTAAATTTTGAAAAGT+TGG | - | Chr2:19714188-19714207 | None:intergenic | 25.0% |
!!! | TGATATTTTTGGTTATCATC+TGG | - | Chr2:19711684-19711703 | None:intergenic | 25.0% |
!!! | TGTAATTTGTTTAGGTCTTT+TGG | + | Chr2:19714610-19714629 | MsG0280007728.01.T01:intron | 25.0% |
AAAATGAACGTCTCAAAGAA+AGG | + | Chr2:19712033-19712052 | MsG0280007728.01.T01:intron | 30.0% | |
AAACACACAAGAGTTGAATA+TGG | + | Chr2:19714754-19714773 | MsG0280007728.01.T01:CDS | 30.0% | |
AAAGGATTTGAAAGAGAACA+TGG | + | Chr2:19711935-19711954 | MsG0280007728.01.T01:intron | 30.0% | |
AAATGAACGTCTCAAAGAAA+GGG | + | Chr2:19712034-19712053 | MsG0280007728.01.T01:intron | 30.0% | |
AATAATCTTCACACCATCTT+TGG | - | Chr2:19714684-19714703 | None:intergenic | 30.0% | |
AATACAAAACCCAATGATGT+TGG | + | Chr2:19712312-19712331 | MsG0280007728.01.T01:CDS | 30.0% | |
AATATCTAATGAGACTTCCA+AGG | + | Chr2:19713111-19713130 | MsG0280007728.01.T01:intron | 30.0% | |
ATAATCTTCACACCATCTTT+GGG | - | Chr2:19714683-19714702 | None:intergenic | 30.0% | |
ATTAGTACTTGAAATTAGGG+TGG | + | Chr2:19712706-19712725 | MsG0280007728.01.T01:intron | 30.0% | |
CCACTATGTATCAATTATTC+AGG | + | Chr2:19713957-19713976 | MsG0280007728.01.T01:CDS | 30.0% | |
CCTGAATAATTGATACATAG+TGG | - | Chr2:19713960-19713979 | None:intergenic | 30.0% | |
CTAGCAACAATAACAATGAA+TGG | - | Chr2:19713705-19713724 | None:intergenic | 30.0% | |
CTCTTATGATTACTTGAAAG+AGG | + | Chr2:19713037-19713056 | MsG0280007728.01.T01:CDS | 30.0% | |
GACATACAAAAACACAAGTT+AGG | + | Chr2:19714495-19714514 | MsG0280007728.01.T01:intron | 30.0% | |
GATTCAAAATTTGCAACAAG+AGG | - | Chr2:19714923-19714942 | None:intergenic | 30.0% | |
GATTCACAAATGGTGAAAAT+TGG | + | Chr2:19712502-19712521 | MsG0280007728.01.T01:CDS | 30.0% | |
GTGACACATTTGATAAATCA+TGG | - | Chr2:19714790-19714809 | None:intergenic | 30.0% | |
TACAGGAGAATAAACAACAT+AGG | - | Chr2:19714735-19714754 | None:intergenic | 30.0% | |
TATGATTACTTGAAAGAGGA+TGG | + | Chr2:19713041-19713060 | MsG0280007728.01.T01:CDS | 30.0% | |
TCAAAAGATAGTAAATCCAG+AGG | + | Chr2:19714857-19714876 | MsG0280007728.01.T01:CDS | 30.0% | |
TCAAAGTGAAACAGTTACTT+AGG | - | Chr2:19714322-19714341 | None:intergenic | 30.0% | |
TCACACATATTCAACTAAGA+AGG | - | Chr2:19713474-19713493 | None:intergenic | 30.0% | |
TGTGTGATCAAAATGAATCT+AGG | + | Chr2:19714141-19714160 | MsG0280007728.01.T01:intron | 30.0% | |
TTGATGCCTTTCTTATATCT+CGG | + | Chr2:19714278-19714297 | MsG0280007728.01.T01:intron | 30.0% | |
TTGTGAAGAACGTTTAACAT+AGG | - | Chr2:19714347-19714366 | None:intergenic | 30.0% | |
! | AAGCATTTTTATGACAATGG+AGG | + | Chr2:19713383-19713402 | MsG0280007728.01.T01:CDS | 30.0% |
! | GTGCCAACTTTTCAAAATTT+AGG | + | Chr2:19714182-19714201 | MsG0280007728.01.T01:intron | 30.0% |
! | TCACAATAGACTTAGGTTTT+TGG | + | Chr2:19714361-19714380 | MsG0280007728.01.T01:intron | 30.0% |
! | TTCATTTGAAATGACATGGA+AGG | - | Chr2:19714088-19714107 | None:intergenic | 30.0% |
! | TTTGATGATTCAACATGTGT+TGG | - | Chr2:19712481-19712500 | None:intergenic | 30.0% |
! | TTTTGAATCAAACATCCAGA+AGG | - | Chr2:19713091-19713110 | None:intergenic | 30.0% |
!! | AACTTGTTGATTTACAACTC+AGG | + | Chr2:19714254-19714273 | MsG0280007728.01.T01:intron | 30.0% |
!! | ACTTGTTGATTTACAACTCA+GGG | + | Chr2:19714255-19714274 | MsG0280007728.01.T01:intron | 30.0% |
!!! | ACTTAGGTTTTTGGCATAAT+AGG | + | Chr2:19714370-19714389 | MsG0280007728.01.T01:intron | 30.0% |
AAACAACATAGGATCCCAAA+GGG | - | Chr2:19714724-19714743 | None:intergenic | 35.0% | |
AAATTCCCGTGGTTTCATAA+AGG | - | Chr2:19712961-19712980 | None:intergenic | 35.0% | |
AAATTTGCAACAAGAGGACT+AGG | - | Chr2:19714917-19714936 | None:intergenic | 35.0% | |
AACACAAGTTAGGGATTTCT+TGG | + | Chr2:19714505-19714524 | MsG0280007728.01.T01:intron | 35.0% | |
AAGTCGAAAACAATATGAGC+GGG | - | Chr2:19713747-19713766 | None:intergenic | 35.0% | |
ACGTTCTTCACAATAGACTT+AGG | + | Chr2:19714354-19714373 | MsG0280007728.01.T01:intron | 35.0% | |
AGAATGTTTCATAGACCCTT+TGG | + | Chr2:19714706-19714725 | MsG0280007728.01.T01:CDS | 35.0% | |
AGAGTTGACCACTACTTTAA+TGG | + | Chr2:19712453-19712472 | MsG0280007728.01.T01:CDS | 35.0% | |
ATATGTTCTCCACACAAATG+AGG | - | Chr2:19714122-19714141 | None:intergenic | 35.0% | |
CCAAAAATATCAAATAGCCC+AGG | + | Chr2:19711692-19711711 | MsG0280007728.01.T01:CDS | 35.0% | |
CTCATGGAACTTCAAAGAAT+TGG | + | Chr2:19713329-19713348 | MsG0280007728.01.T01:CDS | 35.0% | |
CTTTCACCTTTATGAAACCA+CGG | + | Chr2:19712952-19712971 | MsG0280007728.01.T01:CDS | 35.0% | |
GAAAATTGGAGCAAGACATT+TGG | + | Chr2:19712516-19712535 | MsG0280007728.01.T01:CDS | 35.0% | |
GAAAGAGAACATGGAAATGA+AGG | + | Chr2:19711944-19711963 | MsG0280007728.01.T01:intron | 35.0% | |
GAAGTCGAAAACAATATGAG+CGG | - | Chr2:19713748-19713767 | None:intergenic | 35.0% | |
GAATGTTTCATAGACCCTTT+GGG | + | Chr2:19714707-19714726 | MsG0280007728.01.T01:CDS | 35.0% | |
GAGTTGAATATGGCAATGAA+TGG | + | Chr2:19714764-19714783 | MsG0280007728.01.T01:CDS | 35.0% | |
GTCAACAATGCTATTGCATT+TGG | + | Chr2:19713293-19713312 | MsG0280007728.01.T01:CDS | 35.0% | |
TAAACAACATAGGATCCCAA+AGG | - | Chr2:19714725-19714744 | None:intergenic | 35.0% | |
TAAAGTAGTGGTCAACTCTA+GGG | - | Chr2:19712452-19712471 | None:intergenic | 35.0% | |
TCAGCTTTGCTAACAATAGT+TGG | - | Chr2:19712768-19712787 | None:intergenic | 35.0% | |
TGATGCCTTTCTTATATCTC+GGG | + | Chr2:19714279-19714298 | MsG0280007728.01.T01:intron | 35.0% | |
TGTAATGAAACTTGCACATC+AGG | + | Chr2:19713546-19713565 | MsG0280007728.01.T01:CDS | 35.0% | |
TTAAAGTAGTGGTCAACTCT+AGG | - | Chr2:19712453-19712472 | None:intergenic | 35.0% | |
TTCAACTCTTGTGTGTTTAC+AGG | - | Chr2:19714752-19714771 | None:intergenic | 35.0% | |
TTTCACCTTTATGAAACCAC+GGG | + | Chr2:19712953-19712972 | MsG0280007728.01.T01:CDS | 35.0% | |
TTTCGACTTCTTAAGAGATC+CGG | + | Chr2:19713758-19713777 | MsG0280007728.01.T01:CDS | 35.0% | |
! | AAATCCTTTCATTTTCAGCG+CGG | - | Chr2:19711924-19711943 | None:intergenic | 35.0% |
! | CCTGGGCTATTTGATATTTT+TGG | - | Chr2:19711695-19711714 | None:intergenic | 35.0% |
! | TAGGTATGTCAGTCTTATAG+CGG | + | Chr2:19714389-19714408 | MsG0280007728.01.T01:intron | 35.0% |
! | TATGTCGTGACATTTTCAGA+TGG | - | Chr2:19714481-19714500 | None:intergenic | 35.0% |
!! | GATGGACTCATTCTTCTTTT+TGG | + | Chr2:19713059-19713078 | MsG0280007728.01.T01:CDS | 35.0% |
!! | GTGTCACTTATAATTCCATC+AGG | + | Chr2:19714803-19714822 | MsG0280007728.01.T01:CDS | 35.0% |
AAGCTGAGACTTAACCCATA+AGG | - | Chr2:19712389-19712408 | None:intergenic | 40.0% | |
AAGTTCCATGAGCCATCTTT+GGG | - | Chr2:19713321-19713340 | None:intergenic | 40.0% | |
ACAAAACCCAATGATGTTGG+TGG | + | Chr2:19712315-19712334 | MsG0280007728.01.T01:CDS | 40.0% | |
ACATTTGGTCGACATGTTTC+TGG | + | Chr2:19712531-19712550 | MsG0280007728.01.T01:CDS | 40.0% | |
ATGTGTGCAATTTCATGCCA+TGG | - | Chr2:19713916-19713935 | None:intergenic | 40.0% | |
ATTACACATCTCCTTCCTTC+AGG | - | Chr2:19713532-19713551 | None:intergenic | 40.0% | |
CCTCTATCTAGATTCAAGGA+GGG | - | Chr2:19712268-19712287 | None:intergenic | 40.0% | |
CGAAGAAAGTAAAATTCCCG+TGG | - | Chr2:19712972-19712991 | None:intergenic | 40.0% | |
CTCTATCTAGATTCAAGGAG+GGG | - | Chr2:19712267-19712286 | None:intergenic | 40.0% | |
GAAAGCCCGAGATATAAGAA+AGG | - | Chr2:19714287-19714306 | None:intergenic | 40.0% | |
GAAATTGCACACATCTCTAC+TGG | + | Chr2:19713922-19713941 | MsG0280007728.01.T01:CDS | 40.0% | |
TATGATGCACCTCATTTGTG+TGG | + | Chr2:19714110-19714129 | MsG0280007728.01.T01:intron | 40.0% | |
TCAAAGTGGAGCTTGTGTAT+TGG | + | Chr2:19712825-19712844 | MsG0280007728.01.T01:intron | 40.0% | |
TCAGAGATGAAAAAGCCTGA+TGG | - | Chr2:19714821-19714840 | None:intergenic | 40.0% | |
TCAGTGGTTACATTACCTGA+AGG | + | Chr2:19713514-19713533 | MsG0280007728.01.T01:intron | 40.0% | |
TCCTCTTTCAAGCACTTTGA+TGG | - | Chr2:19712793-19712812 | None:intergenic | 40.0% | |
TGAGCCTCTATCTAGATTCA+AGG | - | Chr2:19712272-19712291 | None:intergenic | 40.0% | |
TGGTTACATTACCTGAAGGA+AGG | + | Chr2:19713518-19713537 | MsG0280007728.01.T01:CDS | 40.0% | |
TTATGCTACGTACAGATGCA+TGG | + | Chr2:19712916-19712935 | MsG0280007728.01.T01:CDS | 40.0% | |
! | AAGCTCCACTTTGACTTTCT+GGG | - | Chr2:19712819-19712838 | None:intergenic | 40.0% |
! | AATGACATGGAAGGAAGTGT+AGG | - | Chr2:19714079-19714098 | None:intergenic | 40.0% |
! | ACAAGTTGAAGCTGGTATGT+GGG | + | Chr2:19713001-19713020 | MsG0280007728.01.T01:CDS | 40.0% |
! | ACCATCAAAGTGCTTGAAAG+AGG | + | Chr2:19712789-19712808 | MsG0280007728.01.T01:CDS | 40.0% |
! | ACTTGCACATCAGGTTGTTA+AGG | + | Chr2:19713555-19713574 | MsG0280007728.01.T01:CDS | 40.0% |
! | ATGATGGGAATTCACTTCCA+AGG | + | Chr2:19712174-19712193 | MsG0280007728.01.T01:intron | 40.0% |
! | CAAAACAAAGAGCACAGGTT+AGG | + | Chr2:19711753-19711772 | MsG0280007728.01.T01:intron | 40.0% |
! | GGACTCATTCTTCTTTTTGG+AGG | + | Chr2:19713062-19713081 | MsG0280007728.01.T01:CDS | 40.0% |
! | GGTTTCAAAACAAAGAGCAC+AGG | + | Chr2:19711748-19711767 | MsG0280007728.01.T01:CDS | 40.0% |
! | TACAAGTTGAAGCTGGTATG+TGG | + | Chr2:19713000-19713019 | MsG0280007728.01.T01:CDS | 40.0% |
! | TATTGCGTACAAGTTGAAGC+TGG | + | Chr2:19712993-19713012 | MsG0280007728.01.T01:CDS | 40.0% |
! | TGGAAGGAAGTGTAGGAAAA+TGG | - | Chr2:19714072-19714091 | None:intergenic | 40.0% |
! | TTCATCTTTTTCCCTGACCT+TGG | - | Chr2:19712194-19712213 | None:intergenic | 40.0% |
!! | CGTTTTGTGATGGAAATCCA+TGG | + | Chr2:19713896-19713915 | MsG0280007728.01.T01:CDS | 40.0% |
!! | TCAGCATCAGCAAAGTATTG+TGG | - | Chr2:19713622-19713641 | None:intergenic | 40.0% |
!! | TCTTTTTGGAGGTTTCCTTC+TGG | + | Chr2:19713073-19713092 | MsG0280007728.01.T01:CDS | 40.0% |
AAAACAATATGAGCGGGAGG+AGG | - | Chr2:19713741-19713760 | None:intergenic | 45.0% | |
AAGCTTAAGCAACTCTTCCG+TGG | - | Chr2:19712353-19712372 | None:intergenic | 45.0% | |
ATCTTCACACCATCTTTGGG+AGG | - | Chr2:19714680-19714699 | None:intergenic | 45.0% | |
CCCTCCTTGAATCTAGATAG+AGG | + | Chr2:19712265-19712284 | MsG0280007728.01.T01:CDS | 45.0% | |
CTAGTTTCTCCTCCCAAAGA+TGG | + | Chr2:19714668-19714687 | MsG0280007728.01.T01:CDS | 45.0% | |
CTTCCTAAAAGCTTGACACG+TGG | + | Chr2:19712238-19712257 | MsG0280007728.01.T01:CDS | 45.0% | |
GAAGTTCCATGAGCCATCTT+TGG | - | Chr2:19713322-19713341 | None:intergenic | 45.0% | |
GCCTCTATCTAGATTCAAGG+AGG | - | Chr2:19712269-19712288 | None:intergenic | 45.0% | |
GGAATTCACTTCCAAGGTCA+GGG | + | Chr2:19712180-19712199 | MsG0280007728.01.T01:intron | 45.0% | |
GGTTTCTTGGATTGAGCATG+TGG | + | Chr2:19713226-19713245 | MsG0280007728.01.T01:intron | 45.0% | |
TAACCCATAAGGACTCATCG+CGG | - | Chr2:19712378-19712397 | None:intergenic | 45.0% | |
TCGAAAACAATATGAGCGGG+AGG | - | Chr2:19713744-19713763 | None:intergenic | 45.0% | |
TGAACCTCAAAACGTCTTGC+CGG | - | Chr2:19713780-19713799 | None:intergenic | 45.0% | |
TGTTGGCGCCATTAAAGTAG+TGG | - | Chr2:19712464-19712483 | None:intergenic | 45.0% | |
TTGAGCCACAACAAGTGAAG+TGG | + | Chr2:19711724-19711743 | MsG0280007728.01.T01:CDS | 45.0% | |
TTGGATTGAGCATGTGGAAG+TGG | + | Chr2:19713232-19713251 | MsG0280007728.01.T01:CDS | 45.0% | |
TTTCCGCGATGAGTCCTTAT+GGG | + | Chr2:19712372-19712391 | MsG0280007728.01.T01:CDS | 45.0% | |
! | AACCACCACTTCACTTGTTG+TGG | - | Chr2:19711732-19711751 | None:intergenic | 45.0% |
! | AGCTCCACTTTGACTTTCTG+GGG | - | Chr2:19712818-19712837 | None:intergenic | 45.0% |
! | CAAGCTCCACTTTGACTTTC+TGG | - | Chr2:19712820-19712839 | None:intergenic | 45.0% |
! | CAGTGGGATACGTTTTGTGA+TGG | + | Chr2:19713886-19713905 | MsG0280007728.01.T01:intron | 45.0% |
! | CTTCCACGTGTCAAGCTTTT+AGG | - | Chr2:19712244-19712263 | None:intergenic | 45.0% |
! | TCTTTGGGAGGAGAAACTAG+AGG | - | Chr2:19714668-19714687 | None:intergenic | 45.0% |
! | TTGCATTTGGAGCCCAAAGA+TGG | + | Chr2:19713306-19713325 | MsG0280007728.01.T01:CDS | 45.0% |
! | TTTTCCGCGATGAGTCCTTA+TGG | + | Chr2:19712371-19712390 | MsG0280007728.01.T01:CDS | 45.0% |
!! | GGTCGACATGTTTCTGGATT+CGG | + | Chr2:19712537-19712556 | MsG0280007728.01.T01:CDS | 45.0% |
AGCCACAACAAGTGAAGTGG+TGG | + | Chr2:19711727-19711746 | MsG0280007728.01.T01:CDS | 50.0% | |
AGTCCAGCCACCAACATCAT+TGG | - | Chr2:19712325-19712344 | None:intergenic | 50.0% | |
CTCTCCGCGCTGAAAATGAA+AGG | + | Chr2:19711917-19711936 | MsG0280007728.01.T01:intron | 50.0% | |
CTTAAGCAACTCTTCCGTGG+CGG | - | Chr2:19712350-19712369 | None:intergenic | 50.0% | |
GACTCCCCAGAAAGTCAAAG+TGG | + | Chr2:19712811-19712830 | MsG0280007728.01.T01:intron | 50.0% | |
GGGAATTCACTTCCAAGGTC+AGG | + | Chr2:19712179-19712198 | MsG0280007728.01.T01:intron | 50.0% | |
GTCCAGCCACCAACATCATT+GGG | - | Chr2:19712324-19712343 | None:intergenic | 50.0% | |
TGCTGATGCTGAGATGACAG+CGG | + | Chr2:19713630-19713649 | MsG0280007728.01.T01:CDS | 50.0% | |
! | AGATCCGGCAAGACGTTTTG+AGG | + | Chr2:19713773-19713792 | MsG0280007728.01.T01:CDS | 50.0% |
!! | AACCCAATGATGTTGGTGGC+TGG | + | Chr2:19712319-19712338 | MsG0280007728.01.T01:CDS | 50.0% |
!! | AGCGGGAGGAGGTATCAAAA+CGG | - | Chr2:19713730-19713749 | None:intergenic | 50.0% |
CACTGTCAGCAACGAACCTC+TGG | - | Chr2:19714876-19714895 | None:intergenic | 55.0% | |
CAGAGGTTCGTTGCTGACAG+TGG | + | Chr2:19714874-19714893 | MsG0280007728.01.T01:CDS | 55.0% | |
CTGATGCTGAGATGACAGCG+GGG | + | Chr2:19713632-19713651 | MsG0280007728.01.T01:CDS | 55.0% | |
GCTGATGCTGAGATGACAGC+GGG | + | Chr2:19713631-19713650 | MsG0280007728.01.T01:CDS | 55.0% | |
TGGAGCCCAAAGATGGCTCA+TGG | + | Chr2:19713313-19713332 | MsG0280007728.01.T01:CDS | 55.0% | |
TGGCTCAAGCTCAAGCTCCT+GGG | - | Chr2:19711712-19711731 | None:intergenic | 55.0% | |
GCTGAGATGACAGCGGGGTT+AGG | + | Chr2:19713637-19713656 | MsG0280007728.01.T01:intron | 60.0% | |
GTGGCTCAAGCTCAAGCTCC+TGG | - | Chr2:19711713-19711732 | None:intergenic | 60.0% | |
!! | GCGCGGAGAGCATCGTTATC+TGG | - | Chr2:19711907-19711926 | None:intergenic | 60.0% |
GGTGGCTGGACTTGCCGCCA+CGG | + | Chr2:19712333-19712352 | MsG0280007728.01.T01:CDS | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
Chr2 | gene | 19711654 | 19715012 | 19711654 | ID=MsG0280007728.01;Name=MsG0280007728.01 |
Chr2 | mRNA | 19711654 | 19715012 | 19711654 | ID=MsG0280007728.01.T01;Parent=MsG0280007728.01;Name=MsG0280007728.01.T01;_AED=0.36;_eAED=0.37;_QI=0|0|0|1|1|1|9|0|530 |
Chr2 | exon | 19711654 | 19711769 | 19711654 | ID=MsG0280007728.01.T01:exon:10236;Parent=MsG0280007728.01.T01 |
Chr2 | exon | 19712201 | 19712558 | 19712201 | ID=MsG0280007728.01.T01:exon:10237;Parent=MsG0280007728.01.T01 |
Chr2 | exon | 19712711 | 19712823 | 19712711 | ID=MsG0280007728.01.T01:exon:10238;Parent=MsG0280007728.01.T01 |
Chr2 | exon | 19712914 | 19713097 | 19712914 | ID=MsG0280007728.01.T01:exon:10239;Parent=MsG0280007728.01.T01 |
Chr2 | exon | 19713227 | 19713404 | 19713227 | ID=MsG0280007728.01.T01:exon:10240;Parent=MsG0280007728.01.T01 |
Chr2 | exon | 19713518 | 19713653 | 19713518 | ID=MsG0280007728.01.T01:exon:10241;Parent=MsG0280007728.01.T01 |
Chr2 | exon | 19713725 | 19713794 | 19713725 | ID=MsG0280007728.01.T01:exon:10242;Parent=MsG0280007728.01.T01 |
Chr2 | exon | 19713889 | 19713978 | 19713889 | ID=MsG0280007728.01.T01:exon:10243;Parent=MsG0280007728.01.T01 |
Chr2 | exon | 19714665 | 19715012 | 19714665 | ID=MsG0280007728.01.T01:exon:10244;Parent=MsG0280007728.01.T01 |
Chr2 | CDS | 19711654 | 19711769 | 19711654 | ID=MsG0280007728.01.T01:cds;Parent=MsG0280007728.01.T01 |
Chr2 | CDS | 19712201 | 19712558 | 19712201 | ID=MsG0280007728.01.T01:cds;Parent=MsG0280007728.01.T01 |
Chr2 | CDS | 19712711 | 19712823 | 19712711 | ID=MsG0280007728.01.T01:cds;Parent=MsG0280007728.01.T01 |
Chr2 | CDS | 19712914 | 19713097 | 19712914 | ID=MsG0280007728.01.T01:cds;Parent=MsG0280007728.01.T01 |
Chr2 | CDS | 19713227 | 19713404 | 19713227 | ID=MsG0280007728.01.T01:cds;Parent=MsG0280007728.01.T01 |
Chr2 | CDS | 19713518 | 19713653 | 19713518 | ID=MsG0280007728.01.T01:cds;Parent=MsG0280007728.01.T01 |
Chr2 | CDS | 19713725 | 19713794 | 19713725 | ID=MsG0280007728.01.T01:cds;Parent=MsG0280007728.01.T01 |
Chr2 | CDS | 19713889 | 19713978 | 19713889 | ID=MsG0280007728.01.T01:cds;Parent=MsG0280007728.01.T01 |
Chr2 | CDS | 19714665 | 19715012 | 19714665 | ID=MsG0280007728.01.T01:cds;Parent=MsG0280007728.01.T01 |
Gene Sequence |
Protein sequence |