Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280007889.01.T01 | XP_024632431.1 | 97.468 | 316 | 8 | 0 | 1 | 316 | 1 | 316 | 0 | 646 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280007889.01.T01 | Q9SY66 | 57.616 | 302 | 125 | 1 | 18 | 319 | 21 | 319 | 1.20E-120 | 365 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280007889.01.T01 | A0A396J9K3 | 97.468 | 316 | 8 | 0 | 1 | 316 | 1 | 316 | 0.0 | 646 |
| Gene ID | Type | Classification |
|---|---|---|
| MsG0280007889.01.T01 | TF | FAR1 |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280007889.01.T01 | MTR_4g035820 | 40.273 | 293 | 162 | 4 | 8 | 298 | 43 | 324 | 1.74e-60 | 204 |
| MsG0280007889.01.T01 | MTR_3g450850 | 38.408 | 289 | 165 | 6 | 2 | 282 | 3 | 286 | 2.50e-56 | 186 |
| MsG0280007889.01.T01 | MTR_6g051425 | 29.964 | 277 | 188 | 4 | 46 | 321 | 18 | 289 | 3.67e-30 | 117 |
| MsG0280007889.01.T01 | MTR_3g012160 | 52.688 | 93 | 44 | 0 | 191 | 283 | 1 | 93 | 2.62e-27 | 103 |
| MsG0280007889.01.T01 | MTR_1g070355 | 27.848 | 237 | 157 | 7 | 51 | 284 | 80 | 305 | 5.69e-17 | 82.0 |
| MsG0280007889.01.T01 | MTR_6g014355 | 34.426 | 122 | 78 | 1 | 115 | 234 | 5 | 126 | 1.12e-16 | 78.6 |
| MsG0280007889.01.T01 | MTR_0402s0040 | 32.338 | 201 | 116 | 10 | 26 | 220 | 6 | 192 | 6.09e-13 | 69.7 |
| MsG0280007889.01.T01 | MTR_5g076070 | 25.523 | 239 | 162 | 9 | 48 | 282 | 56 | 282 | 1.57e-12 | 67.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280007889.01.T01 | AT1G10240 | 57.616 | 302 | 125 | 1 | 18 | 319 | 21 | 319 | 1.22e-121 | 365 |
| MsG0280007889.01.T01 | AT1G10240 | 57.616 | 302 | 125 | 1 | 18 | 319 | 21 | 319 | 1.22e-121 | 365 |
| MsG0280007889.01.T01 | AT5G28530 | 39.542 | 306 | 167 | 5 | 26 | 321 | 39 | 336 | 1.42e-70 | 232 |
| MsG0280007889.01.T01 | AT5G28530 | 39.542 | 306 | 167 | 5 | 26 | 321 | 39 | 336 | 1.91e-70 | 231 |
| MsG0280007889.01.T01 | AT5G28530 | 39.542 | 306 | 167 | 5 | 26 | 321 | 39 | 336 | 1.91e-70 | 231 |
| MsG0280007889.01.T01 | AT5G28530 | 38.916 | 203 | 116 | 4 | 26 | 228 | 39 | 233 | 5.08e-41 | 151 |
| MsG0280007889.01.T01 | AT5G28530 | 38.916 | 203 | 116 | 4 | 26 | 228 | 39 | 233 | 5.37e-41 | 151 |
| MsG0280007889.01.T01 | AT4G38180 | 29.964 | 277 | 188 | 4 | 41 | 317 | 69 | 339 | 5.83e-31 | 123 |
| MsG0280007889.01.T01 | AT4G15090 | 26.710 | 307 | 209 | 7 | 19 | 321 | 25 | 319 | 8.28e-17 | 81.6 |
| MsG0280007889.01.T01 | AT4G15090 | 26.710 | 307 | 209 | 7 | 19 | 321 | 25 | 319 | 8.28e-17 | 81.6 |
| MsG0280007889.01.T01 | AT4G15090 | 26.710 | 307 | 209 | 7 | 19 | 321 | 25 | 319 | 8.28e-17 | 81.6 |
| MsG0280007889.01.T01 | AT4G15090 | 26.710 | 307 | 209 | 7 | 19 | 321 | 25 | 319 | 8.28e-17 | 81.6 |
| MsG0280007889.01.T01 | AT4G15090 | 26.710 | 307 | 209 | 7 | 19 | 321 | 25 | 319 | 8.28e-17 | 81.6 |
| MsG0280007889.01.T01 | AT3G22170 | 23.529 | 306 | 194 | 8 | 30 | 324 | 55 | 331 | 3.55e-15 | 77.0 |
| MsG0280007889.01.T01 | AT3G22170 | 23.529 | 306 | 194 | 8 | 30 | 324 | 55 | 331 | 3.55e-15 | 77.0 |
| MsG0280007889.01.T01 | AT1G76320 | 24.632 | 272 | 186 | 7 | 51 | 321 | 3 | 256 | 5.61e-15 | 76.3 |
| MsG0280007889.01.T01 | AT1G76320 | 24.632 | 272 | 186 | 7 | 51 | 321 | 3 | 256 | 5.72e-15 | 76.3 |
| MsG0280007889.01.T01 | AT1G76320 | 24.632 | 272 | 186 | 7 | 51 | 321 | 3 | 256 | 5.72e-15 | 76.3 |
| MsG0280007889.01.T01 | AT1G76320 | 24.727 | 275 | 188 | 7 | 51 | 324 | 3 | 259 | 1.02e-14 | 75.5 |
| MsG0280007889.01.T01 | AT2G27110 | 24.601 | 313 | 173 | 10 | 11 | 316 | 29 | 285 | 1.40e-14 | 75.1 |
| MsG0280007889.01.T01 | AT2G27110 | 24.601 | 313 | 173 | 10 | 11 | 316 | 29 | 285 | 1.40e-14 | 75.1 |
| MsG0280007889.01.T01 | AT3G07500 | 26.027 | 219 | 143 | 7 | 15 | 225 | 3 | 210 | 3.00e-12 | 65.5 |
Find 69 sgRNAs with CRISPR-Local
Find 84 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CATCTTCAGAAGGTTTATTT+TGG | 0.139353 | 2:-22442883 | None:intergenic |
| ATGACATGCTGTTGGGAATT+TGG | 0.166402 | 2:+22443449 | MsG0280007889.01.T01:CDS |
| AACCACAGCGAGATGATTTA+TGG | 0.207733 | 2:-22442931 | None:intergenic |
| CTTGACAGAATTGTTTCTTC+TGG | 0.282713 | 2:-22442671 | None:intergenic |
| GTCCCTGAATGGCGTGTTAC+TGG | 0.284993 | 2:+22442995 | MsG0280007889.01.T01:CDS |
| AAGGCAAATGTTAAGATTAA+TGG | 0.285271 | 2:+22443144 | MsG0280007889.01.T01:CDS |
| GTGTTAGAATCATCAGAAAA+TGG | 0.302226 | 2:+22442605 | MsG0280007889.01.T01:CDS |
| ACAAATCTTTGACCAATAAA+AGG | 0.311831 | 2:-22442716 | None:intergenic |
| GTACATGCGTATTGTGAAAA+AGG | 0.319270 | 2:+22442961 | MsG0280007889.01.T01:CDS |
| TGGCTTGGATTGGACAATAA+TGG | 0.319336 | 2:+22443469 | MsG0280007889.01.T01:CDS |
| ATTCAATCATATGAGGGATT+TGG | 0.330912 | 2:+22443385 | MsG0280007889.01.T01:CDS |
| CTCACATCTACCTCTGTAAA+AGG | 0.345524 | 2:-22443199 | None:intergenic |
| TGATGATTCTAACACAAAAC+TGG | 0.361170 | 2:-22442597 | None:intergenic |
| AAACCAGTAACACGCCATTC+AGG | 0.361653 | 2:-22442998 | None:intergenic |
| CTTTAGCAAACATGCATATA+CGG | 0.380754 | 2:-22443108 | None:intergenic |
| CTCATCAATTCAATCATATG+AGG | 0.382594 | 2:+22443378 | MsG0280007889.01.T01:CDS |
| CTTTAGTTGCGCCCTTCTGC+GGG | 0.388321 | 2:+22443504 | MsG0280007889.01.T01:CDS |
| GGCCAACCCCATCTTTCCCT+CGG | 0.389341 | 2:-22442814 | None:intergenic |
| CTCTTATCATCAGGAGATAT+CGG | 0.409413 | 2:-22443085 | None:intergenic |
| CACCGCACCCGAGGGAAAGA+TGG | 0.410004 | 2:+22442806 | MsG0280007889.01.T01:CDS |
| CAAAATAAACCTTCTGAAGA+TGG | 0.410862 | 2:+22442884 | MsG0280007889.01.T01:CDS |
| GTTGGGAATTTGGCTTGGAT+TGG | 0.415439 | 2:+22443459 | MsG0280007889.01.T01:CDS |
| TCAAGATAGATAATAATAAC+AGG | 0.416672 | 2:+22443329 | MsG0280007889.01.T01:CDS |
| AGATTAATGGAGCTAGAAAA+AGG | 0.423796 | 2:+22443157 | MsG0280007889.01.T01:CDS |
| TTGAATAAGACGCACCTCAT+TGG | 0.427145 | 2:-22443053 | None:intergenic |
| AATTCCCAACAGCATGTCAT+AGG | 0.437999 | 2:-22443446 | None:intergenic |
| ATGCTGTTGGGAATTTGGCT+TGG | 0.440367 | 2:+22443454 | MsG0280007889.01.T01:CDS |
| ATATGCATGTTTGCTAAAGC+TGG | 0.454030 | 2:+22443112 | MsG0280007889.01.T01:CDS |
| GGGAAAGATGGGGTTGGCCG+AGG | 0.467224 | 2:+22442818 | MsG0280007889.01.T01:CDS |
| CATATACGGCTCTTATCATC+AGG | 0.473122 | 2:-22443094 | None:intergenic |
| GCTTTAGTTGCGCCCTTCTG+CGG | 0.475590 | 2:+22443503 | MsG0280007889.01.T01:CDS |
| AAAATAAACCTTCTGAAGAT+GGG | 0.478175 | 2:+22442885 | MsG0280007889.01.T01:CDS |
| ACCGCACCCGAGGGAAAGAT+GGG | 0.481862 | 2:+22442807 | MsG0280007889.01.T01:CDS |
| GCCAACCCCATCTTTCCCTC+GGG | 0.498859 | 2:-22442813 | None:intergenic |
| CCCCATCTTTCCCTCGGGTG+CGG | 0.504235 | 2:-22442808 | None:intergenic |
| GAGGCCTATGACATGCTGTT+GGG | 0.513583 | 2:+22443442 | MsG0280007889.01.T01:CDS |
| AACCAGTAACACGCCATTCA+GGG | 0.519550 | 2:-22442997 | None:intergenic |
| GAGTACATTGCATGGTCCTA+CGG | 0.523416 | 2:+22443355 | MsG0280007889.01.T01:CDS |
| AAATGGCACAGATTTGTCTC+AGG | 0.538047 | 2:+22442622 | MsG0280007889.01.T01:CDS |
| AGAGGCCTATGACATGCTGT+TGG | 0.543489 | 2:+22443441 | MsG0280007889.01.T01:CDS |
| GGCATACTTCATCCCGCAGA+AGG | 0.555918 | 2:-22443516 | None:intergenic |
| CTAAAGCTGGAATGTCGGTA+AGG | 0.564431 | 2:+22443125 | MsG0280007889.01.T01:CDS |
| AATCCCTCCTTGTTACTCCT+CGG | 0.572238 | 2:-22442835 | None:intergenic |
| AGATGAAAATCACAACTTCA+AGG | 0.572253 | 2:+22443300 | MsG0280007889.01.T01:CDS |
| TGATACAACTTACCGAGTAG+AGG | 0.577242 | 2:+22443423 | MsG0280007889.01.T01:CDS |
| TGAGGGATTTGGTGATGCTG+TGG | 0.581968 | 2:+22443396 | MsG0280007889.01.T01:CDS |
| ATTAGACGACACCGCACCCG+AGG | 0.595086 | 2:+22442797 | MsG0280007889.01.T01:CDS |
| AAATAAACCTTCTGAAGATG+GGG | 0.596801 | 2:+22442886 | MsG0280007889.01.T01:CDS |
| ACTGACAGCAGCATGTCAGA+AGG | 0.603110 | 2:+22442572 | None:intergenic |
| GCATGTCATAGGCCTCTACT+CGG | 0.603797 | 2:-22443435 | None:intergenic |
| ACCCGAGGGAAAGATGGGGT+TGG | 0.604145 | 2:+22442812 | MsG0280007889.01.T01:CDS |
| TCATCAATTCAATCATATGA+GGG | 0.607262 | 2:+22443379 | MsG0280007889.01.T01:CDS |
| GGGGAGGAGGAAAAGCGCAA+AGG | 0.609723 | 2:+22442906 | MsG0280007889.01.T01:CDS |
| GTTTGCTAAAGCTGGAATGT+CGG | 0.610570 | 2:+22443120 | MsG0280007889.01.T01:CDS |
| GGATGACATTGGCACTGTCG+AGG | 0.620402 | 2:+22442643 | MsG0280007889.01.T01:CDS |
| TGATTGAATTGATGAGCCGT+AGG | 0.623124 | 2:-22443371 | None:intergenic |
| TTTGGGGAAATCCGCCGCGG+TGG | 0.634972 | 2:-22442865 | None:intergenic |
| GCATACTTCATCCCGCAGAA+GGG | 0.639213 | 2:-22443515 | None:intergenic |
| TTAGACGACACCGCACCCGA+GGG | 0.644198 | 2:+22442798 | MsG0280007889.01.T01:CDS |
| GATTTGTCTCAGGATGACAT+TGG | 0.649568 | 2:+22442632 | MsG0280007889.01.T01:CDS |
| ACAGGCTCGAGTACATTGCA+TGG | 0.652102 | 2:+22443347 | MsG0280007889.01.T01:CDS |
| TGAGTTGTTAAAATCCAATG+AGG | 0.655034 | 2:+22443039 | MsG0280007889.01.T01:CDS |
| TTTGACCAATAAAAGGAACA+AGG | 0.658851 | 2:-22442709 | None:intergenic |
| AATAAACCTTCTGAAGATGG+GGG | 0.678235 | 2:+22442887 | MsG0280007889.01.T01:CDS |
| AACCATAAATCATCTCGCTG+TGG | 0.685835 | 2:+22442929 | MsG0280007889.01.T01:CDS |
| GGGTTGGCCGAGGAGTAACA+AGG | 0.686418 | 2:+22442828 | MsG0280007889.01.T01:CDS |
| TGGCCGAGGAGTAACAAGGA+GGG | 0.687273 | 2:+22442832 | MsG0280007889.01.T01:CDS |
| TTGGCCGAGGAGTAACAAGG+AGG | 0.692981 | 2:+22442831 | MsG0280007889.01.T01:CDS |
| CCGCACCCGAGGGAAAGATG+GGG | 0.712775 | 2:+22442808 | MsG0280007889.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TCAAGATAGATAATAATAAC+AGG | + | Chr2:22443329-22443348 | MsG0280007889.01.T01:CDS | 20.0% |
| ! | AAGGCAAATGTTAAGATTAA+TGG | + | Chr2:22443144-22443163 | MsG0280007889.01.T01:CDS | 25.0% |
| ! | ACAAATCTTTGACCAATAAA+AGG | - | Chr2:22442719-22442738 | None:intergenic | 25.0% |
| ! | TCATCAATTCAATCATATGA+GGG | + | Chr2:22443379-22443398 | MsG0280007889.01.T01:CDS | 25.0% |
| !! | AAAATAAACCTTCTGAAGAT+GGG | + | Chr2:22442885-22442904 | MsG0280007889.01.T01:CDS | 25.0% |
| !!! | ATCTTCAGAAGGTTTATTTT+GGG | - | Chr2:22442885-22442904 | None:intergenic | 25.0% |
| !!! | ATTTTAACAACTCATGATTG+TGG | - | Chr2:22443033-22443052 | None:intergenic | 25.0% |
| AGATGAAAATCACAACTTCA+AGG | + | Chr2:22443300-22443319 | MsG0280007889.01.T01:CDS | 30.0% | |
| AGATTAATGGAGCTAGAAAA+AGG | + | Chr2:22443157-22443176 | MsG0280007889.01.T01:CDS | 30.0% | |
| ATTCAATCATATGAGGGATT+TGG | + | Chr2:22443385-22443404 | MsG0280007889.01.T01:CDS | 30.0% | |
| CTCATCAATTCAATCATATG+AGG | + | Chr2:22443378-22443397 | MsG0280007889.01.T01:CDS | 30.0% | |
| CTTTAGCAAACATGCATATA+CGG | - | Chr2:22443111-22443130 | None:intergenic | 30.0% | |
| GTGTTAGAATCATCAGAAAA+TGG | + | Chr2:22442605-22442624 | MsG0280007889.01.T01:CDS | 30.0% | |
| TGAGTTGTTAAAATCCAATG+AGG | + | Chr2:22443039-22443058 | MsG0280007889.01.T01:CDS | 30.0% | |
| TGATGATTCTAACACAAAAC+TGG | - | Chr2:22442600-22442619 | None:intergenic | 30.0% | |
| TTTGACCAATAAAAGGAACA+AGG | - | Chr2:22442712-22442731 | None:intergenic | 30.0% | |
| ! | AAATAAACCTTCTGAAGATG+GGG | + | Chr2:22442886-22442905 | MsG0280007889.01.T01:CDS | 30.0% |
| ! | CAAAATAAACCTTCTGAAGA+TGG | + | Chr2:22442884-22442903 | MsG0280007889.01.T01:CDS | 30.0% |
| ! | CATCTTCAGAAGGTTTATTT+TGG | - | Chr2:22442886-22442905 | None:intergenic | 30.0% |
| ! | GTTAACCTTGTTCCTTTTAT+TGG | + | Chr2:22442704-22442723 | MsG0280007889.01.T01:CDS | 30.0% |
| ! | TGCAGTTTTGCTAAACAATT+TGG | + | Chr2:22442767-22442786 | MsG0280007889.01.T01:CDS | 30.0% |
| !!! | TCTTCAGAAGGTTTATTTTG+GGG | - | Chr2:22442884-22442903 | None:intergenic | 30.0% |
| CTCTTATCATCAGGAGATAT+CGG | - | Chr2:22443088-22443107 | None:intergenic | 35.0% | |
| GTACATGCGTATTGTGAAAA+AGG | + | Chr2:22442961-22442980 | MsG0280007889.01.T01:CDS | 35.0% | |
| ! | AATAAACCTTCTGAAGATGG+GGG | + | Chr2:22442887-22442906 | MsG0280007889.01.T01:CDS | 35.0% |
| ! | ATATGCATGTTTGCTAAAGC+TGG | + | Chr2:22443112-22443131 | MsG0280007889.01.T01:CDS | 35.0% |
| ! | CTTGACAGAATTGTTTCTTC+TGG | - | Chr2:22442674-22442693 | None:intergenic | 35.0% |
| ! | TGTTTGTCTTCCTTTTACAG+AGG | + | Chr2:22443189-22443208 | MsG0280007889.01.T01:CDS | 35.0% |
| !! | AAGTATGCCGTCTTTTTCAT+GGG | + | Chr2:22443530-22443549 | MsG0280007889.01.T01:CDS | 35.0% |
| AAATGGCACAGATTTGTCTC+AGG | + | Chr2:22442622-22442641 | MsG0280007889.01.T01:CDS | 40.0% | |
| AACCACAGCGAGATGATTTA+TGG | - | Chr2:22442934-22442953 | None:intergenic | 40.0% | |
| AACCATAAATCATCTCGCTG+TGG | + | Chr2:22442929-22442948 | MsG0280007889.01.T01:CDS | 40.0% | |
| AATTCCCAACAGCATGTCAT+AGG | - | Chr2:22443449-22443468 | None:intergenic | 40.0% | |
| ATGACATGCTGTTGGGAATT+TGG | + | Chr2:22443449-22443468 | MsG0280007889.01.T01:CDS | 40.0% | |
| CATATACGGCTCTTATCATC+AGG | - | Chr2:22443097-22443116 | None:intergenic | 40.0% | |
| CTCACATCTACCTCTGTAAA+AGG | - | Chr2:22443202-22443221 | None:intergenic | 40.0% | |
| GATTTGTCTCAGGATGACAT+TGG | + | Chr2:22442632-22442651 | MsG0280007889.01.T01:CDS | 40.0% | |
| TGATACAACTTACCGAGTAG+AGG | + | Chr2:22443423-22443442 | MsG0280007889.01.T01:CDS | 40.0% | |
| TGATTGAATTGATGAGCCGT+AGG | - | Chr2:22443374-22443393 | None:intergenic | 40.0% | |
| TTGAATAAGACGCACCTCAT+TGG | - | Chr2:22443056-22443075 | None:intergenic | 40.0% | |
| ! | GTTTGCTAAAGCTGGAATGT+CGG | + | Chr2:22443120-22443139 | MsG0280007889.01.T01:CDS | 40.0% |
| ! | TGGCTTGGATTGGACAATAA+TGG | + | Chr2:22443469-22443488 | MsG0280007889.01.T01:CDS | 40.0% |
| !! | CAGATTTTGATGTCCCTGAA+TGG | + | Chr2:22442984-22443003 | MsG0280007889.01.T01:CDS | 40.0% |
| !! | GAAGTATGCCGTCTTTTTCA+TGG | + | Chr2:22443529-22443548 | MsG0280007889.01.T01:CDS | 40.0% |
| !! | GTTGCAGTCTTTTAGAAACG+TGG | + | Chr2:22443228-22443247 | MsG0280007889.01.T01:CDS | 40.0% |
| AAACCAGTAACACGCCATTC+AGG | - | Chr2:22443001-22443020 | None:intergenic | 45.0% | |
| AACCAGTAACACGCCATTCA+GGG | - | Chr2:22443000-22443019 | None:intergenic | 45.0% | |
| AATCCCTCCTTGTTACTCCT+CGG | - | Chr2:22442838-22442857 | None:intergenic | 45.0% | |
| ATGCTGTTGGGAATTTGGCT+TGG | + | Chr2:22443454-22443473 | MsG0280007889.01.T01:CDS | 45.0% | |
| CTAAAGCTGGAATGTCGGTA+AGG | + | Chr2:22443125-22443144 | MsG0280007889.01.T01:CDS | 45.0% | |
| GAGTACATTGCATGGTCCTA+CGG | + | Chr2:22443355-22443374 | MsG0280007889.01.T01:CDS | 45.0% | |
| !! | GTTGGGAATTTGGCTTGGAT+TGG | + | Chr2:22443459-22443478 | MsG0280007889.01.T01:CDS | 45.0% |
| ACAGGCTCGAGTACATTGCA+TGG | + | Chr2:22443347-22443366 | MsG0280007889.01.T01:CDS | 50.0% | |
| AGAGGCCTATGACATGCTGT+TGG | + | Chr2:22443441-22443460 | MsG0280007889.01.T01:CDS | 50.0% | |
| GAGGCCTATGACATGCTGTT+GGG | + | Chr2:22443442-22443461 | MsG0280007889.01.T01:CDS | 50.0% | |
| GCATACTTCATCCCGCAGAA+GGG | - | Chr2:22443518-22443537 | None:intergenic | 50.0% | |
| GCATGTCATAGGCCTCTACT+CGG | - | Chr2:22443438-22443457 | None:intergenic | 50.0% | |
| ! | AAACCTTCTGAAGATGGGGG+AGG | + | Chr2:22442890-22442909 | MsG0280007889.01.T01:CDS | 50.0% |
| ! | AGGGATTTTACTTGCCACCG+CGG | + | Chr2:22442851-22442870 | MsG0280007889.01.T01:CDS | 50.0% |
| !! | TATTTTGGGGAAATCCGCCG+CGG | - | Chr2:22442871-22442890 | None:intergenic | 50.0% |
| !! | TGAGGGATTTGGTGATGCTG+TGG | + | Chr2:22443396-22443415 | MsG0280007889.01.T01:CDS | 50.0% |
| CTTTAGTTGCGCCCTTCTGC+GGG | + | Chr2:22443504-22443523 | MsG0280007889.01.T01:CDS | 55.0% | |
| GCTTTAGTTGCGCCCTTCTG+CGG | + | Chr2:22443503-22443522 | MsG0280007889.01.T01:CDS | 55.0% | |
| GGATGACATTGGCACTGTCG+AGG | + | Chr2:22442643-22442662 | MsG0280007889.01.T01:CDS | 55.0% | |
| GGCATACTTCATCCCGCAGA+AGG | - | Chr2:22443519-22443538 | None:intergenic | 55.0% | |
| GTCCCTGAATGGCGTGTTAC+TGG | + | Chr2:22442995-22443014 | MsG0280007889.01.T01:CDS | 55.0% | |
| TGGCCGAGGAGTAACAAGGA+GGG | + | Chr2:22442832-22442851 | MsG0280007889.01.T01:CDS | 55.0% | |
| TTGGCCGAGGAGTAACAAGG+AGG | + | Chr2:22442831-22442850 | MsG0280007889.01.T01:CDS | 55.0% | |
| ! | GATTTTACTTGCCACCGCGG+CGG | + | Chr2:22442854-22442873 | MsG0280007889.01.T01:CDS | 55.0% |
| ACCCGAGGGAAAGATGGGGT+TGG | + | Chr2:22442812-22442831 | MsG0280007889.01.T01:CDS | 60.0% | |
| ACCGCACCCGAGGGAAAGAT+GGG | + | Chr2:22442807-22442826 | MsG0280007889.01.T01:CDS | 60.0% | |
| ATTAGACGACACCGCACCCG+AGG | + | Chr2:22442797-22442816 | MsG0280007889.01.T01:CDS | 60.0% | |
| CCTCCTCCCCCATCTTCAGA+AGG | - | Chr2:22442896-22442915 | None:intergenic | 60.0% | |
| GCCAACCCCATCTTTCCCTC+GGG | - | Chr2:22442816-22442835 | None:intergenic | 60.0% | |
| GGCCAACCCCATCTTTCCCT+CGG | - | Chr2:22442817-22442836 | None:intergenic | 60.0% | |
| TTAGACGACACCGCACCCGA+GGG | + | Chr2:22442798-22442817 | MsG0280007889.01.T01:CDS | 60.0% | |
| ! | CCTTCTGAAGATGGGGGAGG+AGG | + | Chr2:22442893-22442912 | MsG0280007889.01.T01:CDS | 60.0% |
| ! | GGGGAGGAGGAAAAGCGCAA+AGG | + | Chr2:22442906-22442925 | MsG0280007889.01.T01:CDS | 60.0% |
| !! | GGGTTGGCCGAGGAGTAACA+AGG | + | Chr2:22442828-22442847 | MsG0280007889.01.T01:CDS | 60.0% |
| CACCGCACCCGAGGGAAAGA+TGG | + | Chr2:22442806-22442825 | MsG0280007889.01.T01:CDS | 65.0% | |
| CCCCATCTTTCCCTCGGGTG+CGG | - | Chr2:22442811-22442830 | None:intergenic | 65.0% | |
| CCGCACCCGAGGGAAAGATG+GGG | + | Chr2:22442808-22442827 | MsG0280007889.01.T01:CDS | 65.0% | |
| TTTGGGGAAATCCGCCGCGG+TGG | - | Chr2:22442868-22442887 | None:intergenic | 65.0% | |
| !! | GGGAAAGATGGGGTTGGCCG+AGG | + | Chr2:22442818-22442837 | MsG0280007889.01.T01:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr2 | gene | 22442584 | 22443558 | 22442584 | ID=MsG0280007889.01;Name=MsG0280007889.01 |
| Chr2 | mRNA | 22442584 | 22443558 | 22442584 | ID=MsG0280007889.01.T01;Parent=MsG0280007889.01;Name=MsG0280007889.01.T01;_AED=0.48;_eAED=0.48;_QI=0|-1|0|1|-1|1|1|0|324 |
| Chr2 | exon | 22442584 | 22443558 | 22442584 | ID=MsG0280007889.01.T01:exon:13818;Parent=MsG0280007889.01.T01 |
| Chr2 | CDS | 22442584 | 22443558 | 22442584 | ID=MsG0280007889.01.T01:cds;Parent=MsG0280007889.01.T01 |
| Gene Sequence |
| Protein sequence |
