Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280007971.01.T01 | XP_013463217.1 | 91.071 | 280 | 25 | 0 | 1 | 280 | 102 | 381 | 0 | 521 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280007971.01.T01 | A0A072V6I2 | 91.071 | 280 | 25 | 0 | 1 | 280 | 102 | 381 | 0.0 | 521 |
| Gene ID | Type | Classification |
|---|---|---|
| MsG0280007971.01.T01 | TR | mTERF |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280007971.01.T01 | MTR_2g436400 | 91.071 | 280 | 25 | 0 | 1 | 280 | 102 | 381 | 0.0 | 521 |
| MsG0280007971.01.T01 | MTR_2g437060 | 78.246 | 285 | 62 | 0 | 2 | 286 | 111 | 395 | 1.79e-161 | 454 |
| MsG0280007971.01.T01 | MTR_2g437080 | 68.403 | 288 | 91 | 0 | 1 | 288 | 95 | 382 | 4.96e-141 | 402 |
| MsG0280007971.01.T01 | MTR_2g437030 | 69.097 | 288 | 89 | 0 | 1 | 288 | 181 | 468 | 2.12e-137 | 396 |
| MsG0280007971.01.T01 | MTR_2g436440 | 65.965 | 285 | 97 | 0 | 1 | 285 | 101 | 385 | 1.64e-130 | 376 |
| MsG0280007971.01.T01 | MTR_2g437020 | 64.931 | 288 | 98 | 2 | 2 | 287 | 95 | 381 | 1.63e-128 | 370 |
| MsG0280007971.01.T01 | MTR_2g437040 | 61.592 | 289 | 111 | 0 | 1 | 289 | 95 | 383 | 6.68e-124 | 359 |
| MsG0280007971.01.T01 | MTR_4g119550 | 52.098 | 286 | 136 | 1 | 1 | 285 | 104 | 389 | 1.08e-102 | 305 |
| MsG0280007971.01.T01 | MTR_2g437170 | 51.903 | 289 | 134 | 3 | 1 | 284 | 110 | 398 | 1.69e-98 | 295 |
| MsG0280007971.01.T01 | MTR_2g437960 | 49.828 | 291 | 143 | 2 | 1 | 288 | 108 | 398 | 1.73e-97 | 292 |
| MsG0280007971.01.T01 | MTR_2g437960 | 49.828 | 291 | 143 | 2 | 1 | 288 | 108 | 398 | 3.54e-97 | 292 |
| MsG0280007971.01.T01 | MTR_2g438010 | 50.877 | 285 | 133 | 3 | 1 | 280 | 125 | 407 | 2.78e-95 | 287 |
| MsG0280007971.01.T01 | MTR_2g437150 | 51.049 | 286 | 135 | 3 | 1 | 281 | 110 | 395 | 5.00e-95 | 286 |
| MsG0280007971.01.T01 | MTR_2g437180 | 49.826 | 287 | 139 | 2 | 1 | 284 | 104 | 388 | 1.01e-94 | 285 |
| MsG0280007971.01.T01 | MTR_2g437160 | 50.699 | 286 | 139 | 1 | 1 | 284 | 118 | 403 | 3.60e-94 | 284 |
| MsG0280007971.01.T01 | MTR_2g437120 | 50.871 | 287 | 137 | 2 | 1 | 284 | 106 | 391 | 3.92e-93 | 282 |
| MsG0280007971.01.T01 | MTR_2g437100 | 52.669 | 281 | 128 | 3 | 1 | 276 | 115 | 395 | 1.32e-92 | 280 |
| MsG0280007971.01.T01 | MTR_2g437130 | 48.944 | 284 | 145 | 0 | 1 | 284 | 96 | 379 | 6.38e-92 | 278 |
| MsG0280007971.01.T01 | MTR_2g437990 | 47.902 | 286 | 147 | 1 | 1 | 284 | 105 | 390 | 1.24e-90 | 276 |
| MsG0280007971.01.T01 | MTR_2g437200 | 45.860 | 314 | 132 | 2 | 1 | 276 | 85 | 398 | 9.32e-90 | 272 |
| MsG0280007971.01.T01 | MTR_2g076320 | 48.780 | 287 | 134 | 2 | 2 | 280 | 106 | 387 | 4.67e-89 | 271 |
| MsG0280007971.01.T01 | MTR_2g437240 | 42.813 | 327 | 149 | 2 | 1 | 289 | 85 | 411 | 1.61e-87 | 267 |
| MsG0280007971.01.T01 | MTR_2g438020 | 44.099 | 322 | 142 | 2 | 1 | 284 | 124 | 445 | 1.77e-86 | 267 |
| MsG0280007971.01.T01 | MTR_2g437260 | 45.848 | 277 | 148 | 1 | 1 | 275 | 89 | 365 | 3.42e-86 | 263 |
| MsG0280007971.01.T01 | MTR_2g436460 | 45.487 | 277 | 150 | 1 | 1 | 276 | 100 | 376 | 1.78e-81 | 251 |
| MsG0280007971.01.T01 | MTR_2g437090 | 68.639 | 169 | 53 | 0 | 119 | 287 | 1 | 169 | 3.03e-81 | 243 |
| MsG0280007971.01.T01 | MTR_2g019840 | 47.535 | 284 | 141 | 4 | 1 | 280 | 96 | 375 | 1.16e-80 | 249 |
| MsG0280007971.01.T01 | MTR_2g437940 | 47.183 | 284 | 125 | 3 | 1 | 284 | 104 | 362 | 1.52e-79 | 246 |
| MsG0280007971.01.T01 | MTR_2g019810 | 45.714 | 280 | 148 | 3 | 1 | 278 | 84 | 361 | 8.65e-77 | 238 |
| MsG0280007971.01.T01 | MTR_4g120380 | 41.971 | 274 | 159 | 0 | 1 | 274 | 97 | 370 | 1.47e-69 | 220 |
| MsG0280007971.01.T01 | MTR_4g119580 | 40.876 | 274 | 162 | 0 | 1 | 274 | 97 | 370 | 1.07e-68 | 218 |
| MsG0280007971.01.T01 | MTR_2g437160 | 53.500 | 200 | 90 | 1 | 88 | 284 | 113 | 312 | 3.25e-66 | 209 |
| MsG0280007971.01.T01 | MTR_4g120380 | 42.520 | 254 | 146 | 0 | 1 | 254 | 97 | 350 | 3.43e-64 | 207 |
| MsG0280007971.01.T01 | MTR_4g120380 | 28.862 | 246 | 139 | 9 | 19 | 241 | 184 | 416 | 2.43e-19 | 87.8 |
| MsG0280007971.01.T01 | MTR_4g119570 | 35.341 | 249 | 128 | 1 | 26 | 274 | 14 | 229 | 1.57e-44 | 151 |
| MsG0280007971.01.T01 | MTR_3g450500 | 32.384 | 281 | 180 | 4 | 2 | 274 | 92 | 370 | 1.20e-43 | 153 |
| MsG0280007971.01.T01 | MTR_2g436370 | 76.842 | 95 | 22 | 0 | 1 | 95 | 101 | 195 | 2.36e-40 | 139 |
| MsG0280007971.01.T01 | MTR_4g007490 | 30.769 | 286 | 187 | 4 | 1 | 278 | 90 | 372 | 9.26e-37 | 134 |
| MsG0280007971.01.T01 | MTR_2g436380 | 54.867 | 113 | 44 | 3 | 119 | 231 | 1 | 106 | 3.14e-29 | 112 |
| MsG0280007971.01.T01 | MTR_8g080990 | 28.889 | 270 | 188 | 3 | 4 | 270 | 100 | 368 | 1.16e-28 | 113 |
| MsG0280007971.01.T01 | MTR_8g081000 | 25.899 | 278 | 201 | 3 | 1 | 274 | 109 | 385 | 6.98e-26 | 105 |
| MsG0280007971.01.T01 | MTR_8g081000 | 25.899 | 278 | 201 | 3 | 1 | 274 | 109 | 385 | 8.51e-26 | 105 |
| MsG0280007971.01.T01 | MTR_8g081000 | 25.899 | 278 | 201 | 3 | 1 | 274 | 109 | 385 | 8.60e-26 | 105 |
| MsG0280007971.01.T01 | MTR_3g085240 | 60.377 | 53 | 21 | 0 | 178 | 230 | 176 | 228 | 1.48e-15 | 75.1 |
| MsG0280007971.01.T01 | MTR_4g119615 | 60.000 | 50 | 20 | 0 | 218 | 267 | 26 | 75 | 1.13e-13 | 65.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280007971.01.T01 | AT5G07900 | 35.294 | 289 | 176 | 4 | 1 | 283 | 121 | 404 | 3.68e-54 | 181 |
| MsG0280007971.01.T01 | AT1G21150 | 30.282 | 284 | 190 | 4 | 1 | 277 | 72 | 354 | 3.82e-36 | 132 |
| MsG0280007971.01.T01 | AT1G21150 | 30.282 | 284 | 190 | 4 | 1 | 277 | 108 | 390 | 5.48e-36 | 133 |
| MsG0280007971.01.T01 | AT1G21150 | 30.282 | 284 | 190 | 4 | 1 | 277 | 172 | 454 | 1.90e-35 | 132 |
| MsG0280007971.01.T01 | AT1G61980 | 26.752 | 314 | 169 | 7 | 1 | 265 | 104 | 405 | 2.28e-26 | 107 |
| MsG0280007971.01.T01 | AT1G61980 | 26.752 | 314 | 169 | 7 | 1 | 265 | 104 | 405 | 2.28e-26 | 107 |
| MsG0280007971.01.T01 | AT1G61980 | 26.752 | 314 | 169 | 7 | 1 | 265 | 104 | 405 | 2.28e-26 | 107 |
| MsG0280007971.01.T01 | AT1G62010 | 25.442 | 283 | 172 | 5 | 20 | 265 | 109 | 389 | 9.86e-24 | 100 |
| MsG0280007971.01.T01 | AT5G64950 | 30.175 | 285 | 179 | 6 | 6 | 274 | 96 | 376 | 2.48e-23 | 98.6 |
| MsG0280007971.01.T01 | AT1G61970 | 25.828 | 302 | 175 | 8 | 1 | 259 | 104 | 399 | 9.25e-22 | 94.7 |
| MsG0280007971.01.T01 | AT1G61970 | 25.828 | 302 | 175 | 8 | 1 | 259 | 104 | 399 | 9.25e-22 | 94.7 |
| MsG0280007971.01.T01 | AT1G61970 | 25.828 | 302 | 175 | 8 | 1 | 259 | 104 | 399 | 9.25e-22 | 94.7 |
| MsG0280007971.01.T01 | AT1G61970 | 25.828 | 302 | 175 | 8 | 1 | 259 | 104 | 399 | 9.25e-22 | 94.7 |
| MsG0280007971.01.T01 | AT1G61970 | 25.828 | 302 | 175 | 8 | 1 | 259 | 104 | 399 | 9.25e-22 | 94.7 |
| MsG0280007971.01.T01 | AT1G61970 | 25.828 | 302 | 175 | 8 | 1 | 259 | 104 | 399 | 9.25e-22 | 94.7 |
| MsG0280007971.01.T01 | AT1G61970 | 25.828 | 302 | 175 | 8 | 1 | 259 | 104 | 399 | 9.25e-22 | 94.7 |
| MsG0280007971.01.T01 | AT3G46950 | 24.642 | 349 | 187 | 9 | 1 | 277 | 104 | 448 | 2.65e-21 | 93.6 |
| MsG0280007971.01.T01 | AT1G62120 | 24.183 | 306 | 189 | 6 | 1 | 265 | 108 | 411 | 5.51e-21 | 92.4 |
| MsG0280007971.01.T01 | AT1G61990 | 24.688 | 320 | 179 | 7 | 1 | 273 | 104 | 408 | 2.30e-19 | 87.8 |
| MsG0280007971.01.T01 | AT1G61990 | 24.688 | 320 | 179 | 7 | 1 | 273 | 104 | 408 | 2.30e-19 | 87.8 |
| MsG0280007971.01.T01 | AT1G62085 | 24.638 | 345 | 174 | 9 | 1 | 265 | 107 | 445 | 3.70e-19 | 87.4 |
| MsG0280007971.01.T01 | AT1G62085 | 24.638 | 345 | 174 | 9 | 1 | 265 | 107 | 445 | 3.70e-19 | 87.4 |
| MsG0280007971.01.T01 | AT1G62110 | 26.768 | 198 | 138 | 3 | 1 | 193 | 104 | 299 | 3.31e-14 | 72.8 |
| MsG0280007971.01.T01 | AT1G61960 | 22.571 | 350 | 192 | 8 | 1 | 273 | 104 | 451 | 6.35e-14 | 72.0 |
| MsG0280007971.01.T01 | AT5G23930 | 26.852 | 108 | 79 | 0 | 157 | 264 | 329 | 436 | 7.50e-12 | 65.9 |
Find 54 sgRNAs with CRISPR-Local
Find 74 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCAATCTGACAAGGAAATTT+TGG | 0.119034 | 2:+23834946 | MsG0280007971.01.T01:CDS |
| TAAATTTAGTGATGGACTTT+TGG | 0.199642 | 2:+23835317 | MsG0280007971.01.T01:CDS |
| GTGAAGGAATTAAAGGATTT+GGG | 0.230293 | 2:+23835121 | MsG0280007971.01.T01:CDS |
| AGACCAACCCCATTTCTTAA+AGG | 0.251996 | 2:-23835230 | None:intergenic |
| GGTATTGATTACTGTTGTTT+TGG | 0.274832 | 2:-23835185 | None:intergenic |
| TGACAAAATATAAGGTGTTT+TGG | 0.274912 | 2:-23835374 | None:intergenic |
| GGTGAAGGAATTAAAGGATT+TGG | 0.282534 | 2:+23835120 | MsG0280007971.01.T01:CDS |
| ATGGATGTTAACATACAATA+AGG | 0.292032 | 2:-23835286 | None:intergenic |
| AGGTTGGGACTATTTGATTC+TGG | 0.292547 | 2:-23834901 | None:intergenic |
| AATAGTCCCAACCTATGAAT+TGG | 0.318801 | 2:+23834910 | MsG0280007971.01.T01:CDS |
| AAACTTTGGCAACACCGTTT+TGG | 0.327649 | 2:-23834795 | None:intergenic |
| AAACTTACTGACAAAATATA+AGG | 0.343939 | 2:-23835382 | None:intergenic |
| AAGTTGATACCTTTAAGAAA+TGG | 0.365182 | 2:+23835221 | MsG0280007971.01.T01:CDS |
| AGTTGATACCTTTAAGAAAT+GGG | 0.365271 | 2:+23835222 | MsG0280007971.01.T01:CDS |
| TTGGGTCAATCAGTTGGGTT+GGG | 0.365374 | 2:+23835336 | MsG0280007971.01.T01:CDS |
| ATAGTCCCAACCTATGAATT+GGG | 0.378046 | 2:+23834911 | MsG0280007971.01.T01:CDS |
| CAAGTCGGTGAAGGAATTAA+AGG | 0.378802 | 2:+23835114 | MsG0280007971.01.T01:CDS |
| AAGCTTAACTTATCCATTTG+TGG | 0.394483 | 2:+23835477 | MsG0280007971.01.T01:CDS |
| GTCAGAGGTAGAAGCACCTT+TGG | 0.417863 | 2:-23834831 | None:intergenic |
| AACTTATCAGTCACCACAAA+TGG | 0.427865 | 2:-23835490 | None:intergenic |
| TTTGGGTCAATCAGTTGGGT+TGG | 0.431987 | 2:+23835335 | MsG0280007971.01.T01:CDS |
| TATCAACTTTCTCTTTCCAT+AGG | 0.439630 | 2:-23835207 | None:intergenic |
| GGTTTGCAGGAAAGCAGCTC+TGG | 0.441213 | 2:-23834770 | None:intergenic |
| GAATCTGTACCCCAATTCAT+AGG | 0.453555 | 2:-23834921 | None:intergenic |
| ATCACAATGCTGATTGAGAA+TGG | 0.457142 | 2:+23835022 | MsG0280007971.01.T01:CDS |
| GGAAAGCAGCTCTGGCATCT+TGG | 0.471973 | 2:-23834762 | None:intergenic |
| CTGTACCCCAATTCATAGGT+TGG | 0.485149 | 2:-23834917 | None:intergenic |
| AGGCTTGCATACAAAACTCT+AGG | 0.506576 | 2:-23834878 | None:intergenic |
| TCAGTTGGGTTGGGATGCTA+TGG | 0.506950 | 2:+23835345 | MsG0280007971.01.T01:CDS |
| TCACAATGCTGATTGAGAAT+GGG | 0.508211 | 2:+23835023 | MsG0280007971.01.T01:CDS |
| TGTACCCCAATTCATAGGTT+GGG | 0.510530 | 2:-23834916 | None:intergenic |
| CAACAGTAATCAATACCCTA+TGG | 0.513109 | 2:+23835191 | MsG0280007971.01.T01:CDS |
| ATCAACTTTCTCTTTCCATA+GGG | 0.529759 | 2:-23835206 | None:intergenic |
| GTGCAATTTCTTCTCAACAA+AGG | 0.536369 | 2:+23835436 | MsG0280007971.01.T01:CDS |
| TTCCTGCAAACCCTCCAAAA+CGG | 0.545667 | 2:+23834781 | MsG0280007971.01.T01:CDS |
| GTTGATACCTTTAAGAAATG+GGG | 0.553181 | 2:+23835223 | MsG0280007971.01.T01:CDS |
| TTGGGACTATTTGATTCTGG+AGG | 0.560239 | 2:-23834898 | None:intergenic |
| AATTGCACAACAGCGGCCCT+CGG | 0.562081 | 2:-23835421 | None:intergenic |
| CAGATTCTTGCAATCTGACA+AGG | 0.577846 | 2:+23834937 | MsG0280007971.01.T01:CDS |
| CATTGCTGAGGGAACAGACT+CGG | 0.581919 | 2:+23835068 | MsG0280007971.01.T01:CDS |
| ATACCTTTAAGAAATGGGGT+TGG | 0.587688 | 2:+23835227 | MsG0280007971.01.T01:CDS |
| AACGCAATCTTGGATACACC+AGG | 0.592253 | 2:+23835581 | MsG0280007971.01.T01:CDS |
| TGAAGGAATTAAAGGATTTG+GGG | 0.597102 | 2:+23835122 | MsG0280007971.01.T01:CDS |
| TGACATGCTCAAGTCGGTGA+AGG | 0.598383 | 2:+23835105 | MsG0280007971.01.T01:CDS |
| AAACATTAAAACATTGCTGA+GGG | 0.598387 | 2:+23835057 | MsG0280007971.01.T01:CDS |
| TAACACGCATGTCTTGTCCC+TGG | 0.606169 | 2:-23835599 | None:intergenic |
| GGCTTGCATACAAAACTCTA+GGG | 0.606205 | 2:-23834877 | None:intergenic |
| GACAATGTTAACAATGTCAG+AGG | 0.618058 | 2:-23834846 | None:intergenic |
| CACAATGCTGATTGAGAATG+GGG | 0.632348 | 2:+23835024 | MsG0280007971.01.T01:CDS |
| GAGAAGAAATTGCACAACAG+CGG | 0.635644 | 2:-23835428 | None:intergenic |
| CAAACATTAAAACATTGCTG+AGG | 0.635961 | 2:+23835056 | MsG0280007971.01.T01:CDS |
| TAGTCCCAACCTATGAATTG+GGG | 0.643397 | 2:+23834912 | MsG0280007971.01.T01:CDS |
| GAGACGTGACATGCTCAAGT+CGG | 0.666473 | 2:+23835099 | MsG0280007971.01.T01:CDS |
| ACGCAATCTTGGATACACCA+GGG | 0.724913 | 2:+23835582 | MsG0280007971.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TGAAAAAATAAATTTAGTGA+TGG | + | Chr2:23835309-23835328 | MsG0280007971.01.T01:CDS | 15.0% |
| !!! | CACTAAATTTATTTTTTCAA+TGG | - | Chr2:23835308-23835327 | None:intergenic | 15.0% |
| !! | AAACTTACTGACAAAATATA+AGG | - | Chr2:23835385-23835404 | None:intergenic | 20.0% |
| !!! | TTATATTTTGTCAGTAAGTT+TGG | + | Chr2:23835384-23835403 | MsG0280007971.01.T01:CDS | 20.0% |
| !!! | TTATCTTTTAAAGTTGTATG+AGG | + | Chr2:23835555-23835574 | MsG0280007971.01.T01:CDS | 20.0% |
| ! | AAACATTAAAACATTGCTGA+GGG | + | Chr2:23835057-23835076 | MsG0280007971.01.T01:CDS | 25.0% |
| ! | ATGGATGTTAACATACAATA+AGG | - | Chr2:23835289-23835308 | None:intergenic | 25.0% |
| ! | GAGAGAAAAAATTGAAACTT+TGG | - | Chr2:23834812-23834831 | None:intergenic | 25.0% |
| !! | AATCCTTCAAAAACAACTTT+TGG | + | Chr2:23835148-23835167 | MsG0280007971.01.T01:CDS | 25.0% |
| !! | AGTTGATACCTTTAAGAAAT+GGG | + | Chr2:23835222-23835241 | MsG0280007971.01.T01:CDS | 25.0% |
| !! | TATAAAACGTTTTCAGAATG+AGG | + | Chr2:23835528-23835547 | MsG0280007971.01.T01:CDS | 25.0% |
| !!! | AAATTTAGTGATGGACTTTT+GGG | + | Chr2:23835318-23835337 | MsG0280007971.01.T01:CDS | 25.0% |
| !!! | AAGTTGATACCTTTAAGAAA+TGG | + | Chr2:23835221-23835240 | MsG0280007971.01.T01:CDS | 25.0% |
| !!! | TAAATTTAGTGATGGACTTT+TGG | + | Chr2:23835317-23835336 | MsG0280007971.01.T01:CDS | 25.0% |
| !!! | TGACAAAATATAAGGTGTTT+TGG | - | Chr2:23835377-23835396 | None:intergenic | 25.0% |
| !!! | TTTCAATTTTTTCTCTCCAA+AGG | + | Chr2:23834815-23834834 | MsG0280007971.01.T01:CDS | 25.0% |
| AAGCTTAACTTATCCATTTG+TGG | + | Chr2:23835477-23835496 | MsG0280007971.01.T01:CDS | 30.0% | |
| ATCAACTTTCTCTTTCCATA+GGG | - | Chr2:23835209-23835228 | None:intergenic | 30.0% | |
| CAAACATTAAAACATTGCTG+AGG | + | Chr2:23835056-23835075 | MsG0280007971.01.T01:CDS | 30.0% | |
| GTGAAGGAATTAAAGGATTT+GGG | + | Chr2:23835121-23835140 | MsG0280007971.01.T01:CDS | 30.0% | |
| TATCAACTTTCTCTTTCCAT+AGG | - | Chr2:23835210-23835229 | None:intergenic | 30.0% | |
| TGAAGGAATTAAAGGATTTG+GGG | + | Chr2:23835122-23835141 | MsG0280007971.01.T01:CDS | 30.0% | |
| TGTCAGTAAGTTTGGAAAAA+AGG | + | Chr2:23835392-23835411 | MsG0280007971.01.T01:CDS | 30.0% | |
| ! | GTTGATACCTTTAAGAAATG+GGG | + | Chr2:23835223-23835242 | MsG0280007971.01.T01:CDS | 30.0% |
| !!! | AATATAAGGTGTTTTGGCAA+TGG | - | Chr2:23835371-23835390 | None:intergenic | 30.0% |
| !!! | GGTATTGATTACTGTTGTTT+TGG | - | Chr2:23835188-23835207 | None:intergenic | 30.0% |
| AACTTATCAGTCACCACAAA+TGG | - | Chr2:23835493-23835512 | None:intergenic | 35.0% | |
| AATAGTCCCAACCTATGAAT+TGG | + | Chr2:23834910-23834929 | MsG0280007971.01.T01:CDS | 35.0% | |
| ATAGTCCCAACCTATGAATT+GGG | + | Chr2:23834911-23834930 | MsG0280007971.01.T01:CDS | 35.0% | |
| CAACAGTAATCAATACCCTA+TGG | + | Chr2:23835191-23835210 | MsG0280007971.01.T01:CDS | 35.0% | |
| GACAATGTTAACAATGTCAG+AGG | - | Chr2:23834849-23834868 | None:intergenic | 35.0% | |
| GGTGAAGGAATTAAAGGATT+TGG | + | Chr2:23835120-23835139 | MsG0280007971.01.T01:CDS | 35.0% | |
| GTGCAATTTCTTCTCAACAA+AGG | + | Chr2:23835436-23835455 | MsG0280007971.01.T01:CDS | 35.0% | |
| TATGAGGAAAAACGCAATCT+TGG | + | Chr2:23835571-23835590 | MsG0280007971.01.T01:CDS | 35.0% | |
| ! | ATACCTTTAAGAAATGGGGT+TGG | + | Chr2:23835227-23835246 | MsG0280007971.01.T01:CDS | 35.0% |
| ! | ATCACAATGCTGATTGAGAA+TGG | + | Chr2:23835022-23835041 | MsG0280007971.01.T01:CDS | 35.0% |
| ! | GCAATCTGACAAGGAAATTT+TGG | + | Chr2:23834946-23834965 | MsG0280007971.01.T01:CDS | 35.0% |
| ! | TCACAATGCTGATTGAGAAT+GGG | + | Chr2:23835023-23835042 | MsG0280007971.01.T01:CDS | 35.0% |
| !!! | GCACCAAAAGTTGTTTTTGA+AGG | - | Chr2:23835154-23835173 | None:intergenic | 35.0% |
| AGACCAACCCCATTTCTTAA+AGG | - | Chr2:23835233-23835252 | None:intergenic | 40.0% | |
| AGGCTTGCATACAAAACTCT+AGG | - | Chr2:23834881-23834900 | None:intergenic | 40.0% | |
| AGGTTGGGACTATTTGATTC+TGG | - | Chr2:23834904-23834923 | None:intergenic | 40.0% | |
| CAAGTCGGTGAAGGAATTAA+AGG | + | Chr2:23835114-23835133 | MsG0280007971.01.T01:CDS | 40.0% | |
| CAGATTCTTGCAATCTGACA+AGG | + | Chr2:23834937-23834956 | MsG0280007971.01.T01:CDS | 40.0% | |
| GAATCTGTACCCCAATTCAT+AGG | - | Chr2:23834924-23834943 | None:intergenic | 40.0% | |
| GAGAAGAAATTGCACAACAG+CGG | - | Chr2:23835431-23835450 | None:intergenic | 40.0% | |
| GGAAAAAAGGATCATTCCGA+GGG | + | Chr2:23835405-23835424 | MsG0280007971.01.T01:CDS | 40.0% | |
| GGCTTGCATACAAAACTCTA+GGG | - | Chr2:23834880-23834899 | None:intergenic | 40.0% | |
| TAGTCCCAACCTATGAATTG+GGG | + | Chr2:23834912-23834931 | MsG0280007971.01.T01:CDS | 40.0% | |
| TGGAAAAAAGGATCATTCCG+AGG | + | Chr2:23835404-23835423 | MsG0280007971.01.T01:CDS | 40.0% | |
| TGTACCCCAATTCATAGGTT+GGG | - | Chr2:23834919-23834938 | None:intergenic | 40.0% | |
| TTGGGACTATTTGATTCTGG+AGG | - | Chr2:23834901-23834920 | None:intergenic | 40.0% | |
| ! | AAACTTTGGCAACACCGTTT+TGG | - | Chr2:23834798-23834817 | None:intergenic | 40.0% |
| ! | CACAATGCTGATTGAGAATG+GGG | + | Chr2:23835024-23835043 | MsG0280007971.01.T01:CDS | 40.0% |
| !! | GACTTTTGGGTCAATCAGTT+GGG | + | Chr2:23835331-23835350 | MsG0280007971.01.T01:CDS | 40.0% |
| AACGCAATCTTGGATACACC+AGG | + | Chr2:23835581-23835600 | MsG0280007971.01.T01:CDS | 45.0% | |
| ACGCAATCTTGGATACACCA+GGG | + | Chr2:23835582-23835601 | MsG0280007971.01.T01:CDS | 45.0% | |
| CTGTACCCCAATTCATAGGT+TGG | - | Chr2:23834920-23834939 | None:intergenic | 45.0% | |
| TTCCTGCAAACCCTCCAAAA+CGG | + | Chr2:23834781-23834800 | MsG0280007971.01.T01:CDS | 45.0% | |
| TTGGGTCAATCAGTTGGGTT+GGG | + | Chr2:23835336-23835355 | MsG0280007971.01.T01:CDS | 45.0% | |
| TTTGGGTCAATCAGTTGGGT+TGG | + | Chr2:23835335-23835354 | MsG0280007971.01.T01:CDS | 45.0% | |
| !! | GGACTTTTGGGTCAATCAGT+TGG | + | Chr2:23835330-23835349 | MsG0280007971.01.T01:CDS | 45.0% |
| !! | TTTGGCAACACCGTTTTGGA+GGG | - | Chr2:23834794-23834813 | None:intergenic | 45.0% |
| CATTGCTGAGGGAACAGACT+CGG | + | Chr2:23835068-23835087 | MsG0280007971.01.T01:CDS | 50.0% | |
| GAGACGTGACATGCTCAAGT+CGG | + | Chr2:23835099-23835118 | MsG0280007971.01.T01:CDS | 50.0% | |
| TAACACGCATGTCTTGTCCC+TGG | - | Chr2:23835602-23835621 | None:intergenic | 50.0% | |
| TGACATGCTCAAGTCGGTGA+AGG | + | Chr2:23835105-23835124 | MsG0280007971.01.T01:CDS | 50.0% | |
| ! | CTTTGGCAACACCGTTTTGG+AGG | - | Chr2:23834795-23834814 | None:intergenic | 50.0% |
| !! | GTCAGAGGTAGAAGCACCTT+TGG | - | Chr2:23834834-23834853 | None:intergenic | 50.0% |
| !! | TCAGTTGGGTTGGGATGCTA+TGG | + | Chr2:23835345-23835364 | MsG0280007971.01.T01:CDS | 50.0% |
| AATTGCACAACAGCGGCCCT+CGG | - | Chr2:23835424-23835443 | None:intergenic | 55.0% | |
| GGTTTGCAGGAAAGCAGCTC+TGG | - | Chr2:23834773-23834792 | None:intergenic | 55.0% | |
| ! | GGAAAGCAGCTCTGGCATCT+TGG | - | Chr2:23834765-23834784 | None:intergenic | 55.0% |
| !!! | CACCGTTTTGGAGGGTTTGC+AGG | - | Chr2:23834786-23834805 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr2 | gene | 23834755 | 23835624 | 23834755 | ID=MsG0280007971.01;Name=MsG0280007971.01 |
| Chr2 | mRNA | 23834755 | 23835624 | 23834755 | ID=MsG0280007971.01.T01;Parent=MsG0280007971.01;Name=MsG0280007971.01.T01;_AED=0.24;_eAED=0.24;_QI=0|-1|0|1|-1|1|1|0|289 |
| Chr2 | exon | 23834755 | 23835624 | 23834755 | ID=MsG0280007971.01.T01:exon:3048;Parent=MsG0280007971.01.T01 |
| Chr2 | CDS | 23834755 | 23835624 | 23834755 | ID=MsG0280007971.01.T01:cds;Parent=MsG0280007971.01.T01 |
| Gene Sequence |
| Protein sequence |
