Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280007972.01.T01 | XP_013463221.2 | 95.918 | 343 | 14 | 0 | 2 | 344 | 50 | 392 | 0 | 681 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280007972.01.T01 | A0A396J894 | 95.918 | 343 | 14 | 0 | 2 | 344 | 50 | 392 | 0.0 | 681 |
| Gene ID | Type | Classification |
|---|---|---|
| MsG0280007972.01.T01 | TR | mTERF |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280007972.01.T01 | MTR_2g436460 | 95.918 | 343 | 14 | 0 | 2 | 344 | 37 | 379 | 0.0 | 680 |
| MsG0280007972.01.T01 | MTR_2g437260 | 47.801 | 341 | 175 | 2 | 4 | 342 | 28 | 367 | 5.15e-111 | 329 |
| MsG0280007972.01.T01 | MTR_2g437040 | 49.563 | 343 | 168 | 4 | 5 | 344 | 33 | 373 | 1.95e-110 | 327 |
| MsG0280007972.01.T01 | MTR_2g436440 | 48.837 | 344 | 173 | 2 | 3 | 344 | 37 | 379 | 1.11e-109 | 325 |
| MsG0280007972.01.T01 | MTR_4g120380 | 49.558 | 339 | 168 | 2 | 2 | 338 | 32 | 369 | 1.77e-108 | 322 |
| MsG0280007972.01.T01 | MTR_4g119550 | 48.680 | 341 | 171 | 3 | 5 | 344 | 46 | 383 | 4.27e-108 | 321 |
| MsG0280007972.01.T01 | MTR_2g437200 | 47.340 | 376 | 159 | 4 | 4 | 341 | 24 | 398 | 5.89e-107 | 318 |
| MsG0280007972.01.T01 | MTR_2g437020 | 47.977 | 346 | 174 | 4 | 3 | 344 | 30 | 373 | 2.70e-106 | 316 |
| MsG0280007972.01.T01 | MTR_2g437150 | 49.288 | 351 | 163 | 6 | 7 | 344 | 45 | 393 | 3.50e-106 | 317 |
| MsG0280007972.01.T01 | MTR_2g437170 | 49.857 | 349 | 160 | 6 | 7 | 342 | 45 | 391 | 5.86e-106 | 317 |
| MsG0280007972.01.T01 | MTR_2g436400 | 45.665 | 346 | 185 | 2 | 1 | 344 | 36 | 380 | 1.44e-105 | 314 |
| MsG0280007972.01.T01 | MTR_2g437080 | 47.384 | 344 | 178 | 2 | 3 | 344 | 31 | 373 | 1.81e-105 | 314 |
| MsG0280007972.01.T01 | MTR_2g437130 | 50.000 | 338 | 168 | 1 | 7 | 344 | 38 | 374 | 6.09e-105 | 313 |
| MsG0280007972.01.T01 | MTR_2g437180 | 50.877 | 342 | 158 | 6 | 6 | 342 | 45 | 381 | 1.52e-104 | 312 |
| MsG0280007972.01.T01 | MTR_2g437160 | 49.133 | 346 | 169 | 5 | 4 | 344 | 55 | 398 | 4.61e-104 | 311 |
| MsG0280007972.01.T01 | MTR_2g437030 | 47.507 | 341 | 176 | 2 | 6 | 344 | 120 | 459 | 1.49e-103 | 312 |
| MsG0280007972.01.T01 | MTR_2g437060 | 45.930 | 344 | 183 | 2 | 3 | 344 | 46 | 388 | 1.52e-102 | 307 |
| MsG0280007972.01.T01 | MTR_4g120380 | 50.000 | 320 | 157 | 2 | 2 | 319 | 32 | 350 | 2.57e-102 | 307 |
| MsG0280007972.01.T01 | MTR_2g437990 | 49.280 | 347 | 166 | 5 | 5 | 342 | 38 | 383 | 4.06e-102 | 307 |
| MsG0280007972.01.T01 | MTR_2g019810 | 47.619 | 357 | 159 | 6 | 5 | 341 | 11 | 359 | 5.28e-102 | 305 |
| MsG0280007972.01.T01 | MTR_2g076320 | 48.571 | 350 | 169 | 6 | 5 | 344 | 38 | 386 | 5.77e-102 | 306 |
| MsG0280007972.01.T01 | MTR_4g119580 | 46.988 | 332 | 175 | 1 | 7 | 338 | 39 | 369 | 5.46e-100 | 300 |
| MsG0280007972.01.T01 | MTR_2g437240 | 46.649 | 373 | 158 | 4 | 8 | 341 | 28 | 398 | 5.60e-100 | 301 |
| MsG0280007972.01.T01 | MTR_2g437960 | 49.701 | 334 | 160 | 5 | 14 | 341 | 55 | 386 | 8.92e-100 | 300 |
| MsG0280007972.01.T01 | MTR_2g437960 | 49.701 | 334 | 160 | 5 | 14 | 341 | 55 | 386 | 1.37e-99 | 301 |
| MsG0280007972.01.T01 | MTR_2g437100 | 49.405 | 336 | 160 | 5 | 14 | 341 | 62 | 395 | 3.91e-99 | 299 |
| MsG0280007972.01.T01 | MTR_2g437120 | 48.857 | 350 | 161 | 6 | 4 | 342 | 42 | 384 | 3.93e-99 | 299 |
| MsG0280007972.01.T01 | MTR_2g438010 | 46.264 | 348 | 176 | 4 | 5 | 342 | 58 | 404 | 6.87e-98 | 296 |
| MsG0280007972.01.T01 | MTR_2g438020 | 45.504 | 367 | 161 | 4 | 14 | 342 | 73 | 438 | 2.51e-95 | 292 |
| MsG0280007972.01.T01 | MTR_2g019840 | 46.064 | 343 | 180 | 4 | 4 | 344 | 35 | 374 | 2.11e-93 | 283 |
| MsG0280007972.01.T01 | MTR_2g437940 | 46.243 | 346 | 152 | 7 | 1 | 342 | 40 | 355 | 9.34e-87 | 266 |
| MsG0280007972.01.T01 | MTR_3g450500 | 36.637 | 333 | 200 | 4 | 14 | 338 | 40 | 369 | 1.09e-63 | 207 |
| MsG0280007972.01.T01 | MTR_4g119570 | 41.767 | 249 | 111 | 2 | 89 | 337 | 13 | 227 | 3.53e-55 | 180 |
| MsG0280007972.01.T01 | MTR_2g437160 | 52.000 | 175 | 83 | 1 | 170 | 344 | 134 | 307 | 6.10e-54 | 180 |
| MsG0280007972.01.T01 | MTR_2g437160 | 47.126 | 87 | 44 | 1 | 4 | 88 | 55 | 141 | 1.87e-16 | 79.3 |
| MsG0280007972.01.T01 | MTR_4g007490 | 33.333 | 345 | 211 | 6 | 6 | 338 | 30 | 367 | 3.26e-52 | 177 |
| MsG0280007972.01.T01 | MTR_2g437090 | 46.914 | 162 | 85 | 1 | 183 | 344 | 1 | 161 | 7.25e-47 | 157 |
| MsG0280007972.01.T01 | MTR_2g436370 | 43.353 | 173 | 83 | 3 | 1 | 171 | 35 | 194 | 9.92e-39 | 137 |
| MsG0280007972.01.T01 | MTR_8g080990 | 27.761 | 335 | 237 | 4 | 5 | 335 | 35 | 368 | 2.02e-35 | 132 |
| MsG0280007972.01.T01 | MTR_8g081000 | 27.139 | 339 | 240 | 6 | 5 | 338 | 48 | 384 | 2.40e-32 | 124 |
| MsG0280007972.01.T01 | MTR_8g081000 | 27.139 | 339 | 240 | 6 | 5 | 338 | 48 | 384 | 2.47e-32 | 125 |
| MsG0280007972.01.T01 | MTR_8g081000 | 27.300 | 337 | 238 | 6 | 7 | 338 | 50 | 384 | 3.02e-32 | 125 |
| MsG0280007972.01.T01 | MTR_4g049400 | 43.243 | 111 | 56 | 2 | 6 | 109 | 39 | 149 | 2.16e-18 | 83.6 |
| MsG0280007972.01.T01 | MTR_3g085240 | 41.111 | 90 | 36 | 1 | 243 | 332 | 176 | 248 | 1.34e-15 | 75.9 |
| MsG0280007972.01.T01 | MTR_3g085240 | 40.496 | 121 | 65 | 1 | 8 | 128 | 53 | 166 | 3.18e-15 | 74.7 |
| MsG0280007972.01.T01 | MTR_2g436380 | 44.118 | 68 | 37 | 1 | 183 | 250 | 1 | 67 | 2.89e-11 | 63.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280007972.01.T01 | AT5G07900 | 31.395 | 344 | 229 | 5 | 2 | 339 | 58 | 400 | 1.76e-56 | 189 |
| MsG0280007972.01.T01 | AT1G21150 | 32.530 | 332 | 215 | 6 | 14 | 338 | 57 | 386 | 5.04e-51 | 174 |
| MsG0280007972.01.T01 | AT1G21150 | 31.751 | 337 | 207 | 5 | 14 | 336 | 121 | 448 | 2.44e-50 | 174 |
| MsG0280007972.01.T01 | AT1G21150 | 31.105 | 344 | 228 | 6 | 2 | 338 | 9 | 350 | 2.46e-50 | 171 |
| MsG0280007972.01.T01 | AT1G61990 | 32.418 | 364 | 199 | 6 | 14 | 338 | 53 | 408 | 3.91e-46 | 162 |
| MsG0280007972.01.T01 | AT1G61990 | 32.418 | 364 | 199 | 6 | 14 | 338 | 53 | 408 | 3.91e-46 | 162 |
| MsG0280007972.01.T01 | AT1G61970 | 31.322 | 348 | 201 | 4 | 14 | 324 | 53 | 399 | 1.98e-45 | 160 |
| MsG0280007972.01.T01 | AT1G61970 | 31.322 | 348 | 201 | 4 | 14 | 324 | 53 | 399 | 1.98e-45 | 160 |
| MsG0280007972.01.T01 | AT1G61970 | 31.322 | 348 | 201 | 4 | 14 | 324 | 53 | 399 | 1.98e-45 | 160 |
| MsG0280007972.01.T01 | AT1G61970 | 31.322 | 348 | 201 | 4 | 14 | 324 | 53 | 399 | 1.98e-45 | 160 |
| MsG0280007972.01.T01 | AT1G61970 | 31.322 | 348 | 201 | 4 | 14 | 324 | 53 | 399 | 1.98e-45 | 160 |
| MsG0280007972.01.T01 | AT1G61970 | 31.322 | 348 | 201 | 4 | 14 | 324 | 53 | 399 | 1.98e-45 | 160 |
| MsG0280007972.01.T01 | AT1G61970 | 31.322 | 348 | 201 | 4 | 14 | 324 | 53 | 399 | 1.98e-45 | 160 |
| MsG0280007972.01.T01 | AT1G61980 | 31.148 | 366 | 208 | 8 | 14 | 338 | 53 | 415 | 8.20e-44 | 156 |
| MsG0280007972.01.T01 | AT1G61980 | 31.148 | 366 | 208 | 8 | 14 | 338 | 53 | 415 | 8.20e-44 | 156 |
| MsG0280007972.01.T01 | AT1G61980 | 31.148 | 366 | 208 | 8 | 14 | 338 | 53 | 415 | 8.20e-44 | 156 |
| MsG0280007972.01.T01 | AT1G62120 | 30.769 | 351 | 203 | 7 | 14 | 325 | 57 | 406 | 1.10e-40 | 148 |
| MsG0280007972.01.T01 | AT3G46950 | 28.426 | 394 | 203 | 10 | 4 | 324 | 43 | 430 | 5.07e-36 | 135 |
| MsG0280007972.01.T01 | AT1G62150 | 26.914 | 405 | 215 | 9 | 14 | 344 | 59 | 456 | 1.14e-35 | 135 |
| MsG0280007972.01.T01 | AT1G62010 | 29.747 | 316 | 182 | 6 | 46 | 324 | 71 | 383 | 3.25e-34 | 130 |
| MsG0280007972.01.T01 | AT1G62085 | 28.238 | 386 | 202 | 7 | 14 | 325 | 56 | 440 | 8.27e-34 | 130 |
| MsG0280007972.01.T01 | AT1G62085 | 28.238 | 386 | 202 | 7 | 14 | 325 | 56 | 440 | 8.27e-34 | 130 |
| MsG0280007972.01.T01 | AT1G61960 | 26.847 | 406 | 219 | 9 | 14 | 343 | 53 | 456 | 9.79e-32 | 124 |
| MsG0280007972.01.T01 | AT1G62110 | 33.871 | 248 | 158 | 4 | 14 | 257 | 53 | 298 | 1.72e-29 | 118 |
| MsG0280007972.01.T01 | AT5G23930 | 27.676 | 383 | 200 | 6 | 14 | 325 | 56 | 432 | 7.00e-29 | 116 |
| MsG0280007972.01.T01 | AT5G64950 | 26.912 | 353 | 242 | 8 | 1 | 338 | 24 | 375 | 6.66e-28 | 112 |
| MsG0280007972.01.T01 | AT1G56380 | 24.156 | 385 | 223 | 11 | 10 | 338 | 24 | 395 | 1.33e-18 | 86.7 |
| MsG0280007972.01.T01 | AT1G56380 | 25.195 | 385 | 219 | 12 | 10 | 338 | 13 | 384 | 1.35e-18 | 86.3 |
Find 62 sgRNAs with CRISPR-Local
Find 84 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTAATAAGGTGATTAGATTT+TGG | 0.140970 | 2:-23838913 | MsG0280007972.01.T01:CDS |
| GTCAAGCATTGTTAGCTAAA+AGG | 0.194199 | 2:-23839060 | MsG0280007972.01.T01:CDS |
| ACAAGAAGTCCTAGAATTCT+TGG | 0.265055 | 2:-23839364 | MsG0280007972.01.T01:CDS |
| TCATATCTCATTACCAATTT+CGG | 0.283798 | 2:-23839622 | MsG0280007972.01.T01:CDS |
| CTTCATTGTAAGCATTTCTT+TGG | 0.293256 | 2:-23839256 | MsG0280007972.01.T01:CDS |
| AGACTTGAACCAAGAATTCT+AGG | 0.293342 | 2:+23839355 | None:intergenic |
| TTCAGATGAGAAACCGAAAT+TGG | 0.302872 | 2:+23839609 | None:intergenic |
| TTTGGATTTGGTTAAGGAAA+TGG | 0.314340 | 2:-23839113 | MsG0280007972.01.T01:CDS |
| TTTCGTATAGTTTGGAGAAT+AGG | 0.328948 | 2:-23838838 | MsG0280007972.01.T01:CDS |
| TCAATAACTTTCTCATTAGA+AGG | 0.330374 | 2:+23839286 | None:intergenic |
| ATTGAATTGTCTACTCCATT+TGG | 0.352685 | 2:-23838755 | MsG0280007972.01.T01:CDS |
| TTCGTATAGTTTGGAGAATA+GGG | 0.359509 | 2:-23838837 | MsG0280007972.01.T01:CDS |
| AAGTTGTTGTCTTTAAGAAA+TGG | 0.363837 | 2:-23839009 | MsG0280007972.01.T01:CDS |
| GAATGCTTTGGATTTGGTTA+AGG | 0.364407 | 2:-23839119 | MsG0280007972.01.T01:CDS |
| ATCCACGGAGAAAATTAATA+AGG | 0.367860 | 2:-23838927 | MsG0280007972.01.T01:CDS |
| TTGGATTTGGTTAAGGAAAT+GGG | 0.370960 | 2:-23839112 | MsG0280007972.01.T01:CDS |
| TTGGGTCAATGAGTTGGGTT+GGG | 0.371128 | 2:-23838894 | MsG0280007972.01.T01:CDS |
| AGTTGTTGTCTTTAAGAAAT+GGG | 0.373623 | 2:-23839008 | MsG0280007972.01.T01:CDS |
| TCAAGCATTGTTAGCTAAAA+GGG | 0.379168 | 2:-23839059 | MsG0280007972.01.T01:CDS |
| TGAGATATGAAACTGTGAAT+TGG | 0.388699 | 2:+23839635 | None:intergenic |
| TATGAGGAATGCTTTGGATT+TGG | 0.391016 | 2:-23839125 | MsG0280007972.01.T01:CDS |
| AAATGGTTCTTGAAGCGTTT+AGG | 0.395855 | 2:-23838973 | MsG0280007972.01.T01:CDS |
| TTATGATATGAGGAATGCTT+TGG | 0.397307 | 2:-23839131 | MsG0280007972.01.T01:CDS |
| CTTCTTACCGATTCAAATGT+AGG | 0.407311 | 2:+23839316 | None:intergenic |
| TGAGTTGGGTTGGGACTCTT+CGG | 0.410843 | 2:-23838885 | MsG0280007972.01.T01:CDS |
| GAGATATGAAACTGTGAATT+GGG | 0.423863 | 2:+23839636 | None:intergenic |
| GGGGTCACATTTAAGAATGT+TGG | 0.425752 | 2:+23839462 | None:intergenic |
| TTAAATGTGACCCCTACAAA+AGG | 0.439736 | 2:-23839453 | MsG0280007972.01.T01:CDS |
| GAAAACAGCGATAACTGAAT+CGG | 0.451829 | 2:+23839537 | None:intergenic |
| AAAGTATGTGCAGTGTTTCA+AGG | 0.457987 | 2:-23838708 | MsG0280007972.01.T01:CDS |
| GTTAAGATGTTACTTGATGA+TGG | 0.467708 | 2:-23839211 | MsG0280007972.01.T01:CDS |
| GGGTCACATTTAAGAATGTT+GGG | 0.468503 | 2:+23839463 | None:intergenic |
| ACTCTTCGGCTCTTGTCAAA+AGG | 0.469912 | 2:-23838871 | MsG0280007972.01.T01:CDS |
| CTACATTTGAATCGGTAAGA+AGG | 0.470359 | 2:-23839315 | MsG0280007972.01.T01:CDS |
| TTCTTACCGATTCAAATGTA+GGG | 0.480837 | 2:+23839317 | None:intergenic |
| TTCTTGAAGCGTTTAGGAAG+CGG | 0.487125 | 2:-23838967 | MsG0280007972.01.T01:CDS |
| TTTGGGTCAATGAGTTGGGT+TGG | 0.489140 | 2:-23838895 | MsG0280007972.01.T01:CDS |
| TATTACTGACTTATGATATG+AGG | 0.489927 | 2:-23839141 | MsG0280007972.01.T01:CDS |
| GGCCATGTCGAAATCACGTT+GGG | 0.495859 | 2:-23839038 | MsG0280007972.01.T01:CDS |
| ATGGGGTTGGTCTGATGAAA+TGG | 0.499033 | 2:-23838990 | MsG0280007972.01.T01:CDS |
| TATAATCCCTACATTTGAAT+CGG | 0.504738 | 2:-23839323 | MsG0280007972.01.T01:CDS |
| TGCTTCAAATATTGATATTG+TGG | 0.507432 | 2:-23839395 | MsG0280007972.01.T01:CDS |
| GTTGTTGTCTTTAAGAAATG+GGG | 0.513781 | 2:-23839007 | MsG0280007972.01.T01:CDS |
| TAAATGTGACCCCTACAAAA+GGG | 0.524191 | 2:-23839452 | MsG0280007972.01.T01:CDS |
| AAAACAGCGATAACTGAATC+GGG | 0.527929 | 2:+23839538 | None:intergenic |
| TGCGAAACAACACAAGCCCT+TGG | 0.528307 | 2:+23838809 | None:intergenic |
| TTCGGCTCTTGTCAAAAGGC+CGG | 0.528513 | 2:-23838867 | MsG0280007972.01.T01:CDS |
| TGGAGAATAGGGTCATTCCA+AGG | 0.540810 | 2:-23838826 | MsG0280007972.01.T01:CDS |
| GGTTTGATGTGAAGTGGTCG+AGG | 0.545679 | 2:+23839657 | None:intergenic |
| TTGTCTTTAAGAAATGGGGT+TGG | 0.562623 | 2:-23839003 | MsG0280007972.01.T01:CDS |
| ATTGTGTATGCTAGCATCCA+CGG | 0.577250 | 2:-23838942 | MsG0280007972.01.T01:CDS |
| GGAGAATAGGGTCATTCCAA+GGG | 0.578298 | 2:-23838825 | MsG0280007972.01.T01:CDS |
| GGCTCTTGTCAAAAGGCCGG+AGG | 0.586864 | 2:-23838864 | MsG0280007972.01.T01:CDS |
| GTTTCGCATTTGATCTCCAG+AGG | 0.592319 | 2:-23838794 | MsG0280007972.01.T01:CDS |
| GAATTGGGTTTGATGTGAAG+TGG | 0.623655 | 2:+23839651 | None:intergenic |
| TTGATGTGAAGTGGTCGAGG+AGG | 0.643436 | 2:+23839660 | None:intergenic |
| TCATAAGTCAGTAATATAGA+CGG | 0.645365 | 2:+23839148 | None:intergenic |
| GGGCCATGTCGAAATCACGT+TGG | 0.650039 | 2:-23839039 | MsG0280007972.01.T01:CDS |
| GTGAAGTGGTCGAGGAGGAG+TGG | 0.652557 | 2:+23839665 | None:intergenic |
| ATCCCAACGTGATTTCGACA+TGG | 0.666340 | 2:+23839036 | None:intergenic |
| GTGGATGCTAGCATACACAA+TGG | 0.725284 | 2:+23838944 | None:intergenic |
| GTATGTGCAGTGTTTCAAGG+AGG | 0.760260 | 2:-23838705 | MsG0280007972.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAATAAGGTGATTAGATTTT+GGG | - | Chr2:23839416-23839435 | MsG0280007972.01.T01:CDS | 20.0% |
| !!! | TTAATAAGGTGATTAGATTT+TGG | - | Chr2:23839415-23839434 | MsG0280007972.01.T01:CDS | 20.0% |
| !!! | TTTGAATTTTTAACCTCAAA+AGG | - | Chr2:23838910-23838929 | MsG0280007972.01.T01:CDS | 20.0% |
| ! | AAAGCTATACCTAGAAAAAA+TGG | - | Chr2:23839662-23839681 | MsG0280007972.01.T01:CDS | 25.0% |
| ! | AAGCTATACCTAGAAAAAAT+GGG | - | Chr2:23839663-23839682 | MsG0280007972.01.T01:CDS | 25.0% |
| ! | GAGGTTAAAAATTCAAACTT+TGG | + | Chr2:23838907-23838926 | None:intergenic | 25.0% |
| ! | TATAATCCCTACATTTGAAT+CGG | - | Chr2:23839005-23839024 | MsG0280007972.01.T01:CDS | 25.0% |
| ! | TCAATAACTTTCTCATTAGA+AGG | + | Chr2:23839045-23839064 | None:intergenic | 25.0% |
| ! | TCATAAGTCAGTAATATAGA+CGG | + | Chr2:23839183-23839202 | None:intergenic | 25.0% |
| ! | TCATATCTCATTACCAATTT+CGG | - | Chr2:23838706-23838725 | MsG0280007972.01.T01:CDS | 25.0% |
| ! | TGACAAAAATTTACATTGGT+AGG | + | Chr2:23839252-23839271 | None:intergenic | 25.0% |
| ! | TGCTTCAAATATTGATATTG+TGG | - | Chr2:23838933-23838952 | MsG0280007972.01.T01:CDS | 25.0% |
| ! | TGCTTGACAAAAATTTACAT+TGG | + | Chr2:23839256-23839275 | None:intergenic | 25.0% |
| !! | AAGTTGTTGTCTTTAAGAAA+TGG | - | Chr2:23839319-23839338 | MsG0280007972.01.T01:CDS | 25.0% |
| !! | ACATTTTCATTAACACCAAA+TGG | + | Chr2:23839591-23839610 | None:intergenic | 25.0% |
| !! | AGTTGTTGTCTTTAAGAAAT+GGG | - | Chr2:23839320-23839339 | MsG0280007972.01.T01:CDS | 25.0% |
| !!! | TATTACTGACTTATGATATG+AGG | - | Chr2:23839187-23839206 | MsG0280007972.01.T01:CDS | 25.0% |
| AAACTATACGAAAAAACCTC+CGG | + | Chr2:23839483-23839502 | None:intergenic | 30.0% | |
| ATCCACGGAGAAAATTAATA+AGG | - | Chr2:23839401-23839420 | MsG0280007972.01.T01:CDS | 30.0% | |
| ATTGAATTGTCTACTCCATT+TGG | - | Chr2:23839573-23839592 | MsG0280007972.01.T01:CDS | 30.0% | |
| CTTCATTGTAAGCATTTCTT+TGG | - | Chr2:23839072-23839091 | MsG0280007972.01.T01:CDS | 30.0% | |
| GAGATATGAAACTGTGAATT+GGG | + | Chr2:23838695-23838714 | None:intergenic | 30.0% | |
| TGAGATATGAAACTGTGAAT+TGG | + | Chr2:23838696-23838715 | None:intergenic | 30.0% | |
| TTATGATATGAGGAATGCTT+TGG | - | Chr2:23839197-23839216 | MsG0280007972.01.T01:CDS | 30.0% | |
| TTCGTATAGTTTGGAGAATA+GGG | - | Chr2:23839491-23839510 | MsG0280007972.01.T01:CDS | 30.0% | |
| TTTCGTATAGTTTGGAGAAT+AGG | - | Chr2:23839490-23839509 | MsG0280007972.01.T01:CDS | 30.0% | |
| ! | ATTCTTTTCTATCAAACCTC+TGG | + | Chr2:23839553-23839572 | None:intergenic | 30.0% |
| ! | GTTAAGATGTTACTTGATGA+TGG | - | Chr2:23839117-23839136 | MsG0280007972.01.T01:CDS | 30.0% |
| ! | GTTGTTGTCTTTAAGAAATG+GGG | - | Chr2:23839321-23839340 | MsG0280007972.01.T01:CDS | 30.0% |
| ! | TCAAGCATTGTTAGCTAAAA+GGG | - | Chr2:23839269-23839288 | MsG0280007972.01.T01:CDS | 30.0% |
| ! | TTGGATTTGGTTAAGGAAAT+GGG | - | Chr2:23839216-23839235 | MsG0280007972.01.T01:CDS | 30.0% |
| ! | TTTGGATTTGGTTAAGGAAA+TGG | - | Chr2:23839215-23839234 | MsG0280007972.01.T01:CDS | 30.0% |
| !! | AATATTTGAAGCACCTTTTG+AGG | + | Chr2:23838926-23838945 | None:intergenic | 30.0% |
| !! | TTCTTACCGATTCAAATGTA+GGG | + | Chr2:23839014-23839033 | None:intergenic | 30.0% |
| !!! | TAGTTTTGAAGCTTTTGAAG+CGG | + | Chr2:23838746-23838765 | None:intergenic | 30.0% |
| AAAACAGCGATAACTGAATC+GGG | + | Chr2:23838793-23838812 | None:intergenic | 35.0% | |
| AAAGTATGTGCAGTGTTTCA+AGG | - | Chr2:23839620-23839639 | MsG0280007972.01.T01:CDS | 35.0% | |
| ACAAGAAGTCCTAGAATTCT+TGG | - | Chr2:23838964-23838983 | MsG0280007972.01.T01:CDS | 35.0% | |
| AGACTTGAACCAAGAATTCT+AGG | + | Chr2:23838976-23838995 | None:intergenic | 35.0% | |
| CTACATTTGAATCGGTAAGA+AGG | - | Chr2:23839013-23839032 | MsG0280007972.01.T01:CDS | 35.0% | |
| GAAAACAGCGATAACTGAAT+CGG | + | Chr2:23838794-23838813 | None:intergenic | 35.0% | |
| GGGTCACATTTAAGAATGTT+GGG | + | Chr2:23838868-23838887 | None:intergenic | 35.0% | |
| TAAATGTGACCCCTACAAAA+GGG | - | Chr2:23838876-23838895 | MsG0280007972.01.T01:CDS | 35.0% | |
| TTAAATGTGACCCCTACAAA+AGG | - | Chr2:23838875-23838894 | MsG0280007972.01.T01:CDS | 35.0% | |
| TTCAGATGAGAAACCGAAAT+TGG | + | Chr2:23838722-23838741 | None:intergenic | 35.0% | |
| ! | AAATGGTTCTTGAAGCGTTT+AGG | - | Chr2:23839355-23839374 | MsG0280007972.01.T01:CDS | 35.0% |
| ! | CACCTTATTAATTTTCTCCG+TGG | + | Chr2:23839406-23839425 | None:intergenic | 35.0% |
| ! | GAATGCTTTGGATTTGGTTA+AGG | - | Chr2:23839209-23839228 | MsG0280007972.01.T01:CDS | 35.0% |
| ! | GATAACTGAATCGGGTTTTT+GGG | + | Chr2:23838785-23838804 | None:intergenic | 35.0% |
| ! | GTCAAGCATTGTTAGCTAAA+AGG | - | Chr2:23839268-23839287 | MsG0280007972.01.T01:CDS | 35.0% |
| ! | TATGAGGAATGCTTTGGATT+TGG | - | Chr2:23839203-23839222 | MsG0280007972.01.T01:CDS | 35.0% |
| ! | TTGTCTTTAAGAAATGGGGT+TGG | - | Chr2:23839325-23839344 | MsG0280007972.01.T01:CDS | 35.0% |
| ! | TTTGGCAAAACCCTTTTGTA+GGG | + | Chr2:23838889-23838908 | None:intergenic | 35.0% |
| !! | AGATTTTGGGTCAATGAGTT+GGG | - | Chr2:23839429-23839448 | MsG0280007972.01.T01:CDS | 35.0% |
| !! | ATCGCTGTTTTCAGAAACTA+CGG | - | Chr2:23838802-23838821 | MsG0280007972.01.T01:CDS | 35.0% |
| !! | CTTCTTACCGATTCAAATGT+AGG | + | Chr2:23839015-23839034 | None:intergenic | 35.0% |
| !! | TAGATTTTGGGTCAATGAGT+TGG | - | Chr2:23839428-23839447 | MsG0280007972.01.T01:CDS | 35.0% |
| !!! | GGAGGTTTTTTCGTATAGTT+TGG | - | Chr2:23839482-23839501 | MsG0280007972.01.T01:CDS | 35.0% |
| ATTGTGTATGCTAGCATCCA+CGG | - | Chr2:23839386-23839405 | MsG0280007972.01.T01:CDS | 40.0% | |
| GAATTGGGTTTGATGTGAAG+TGG | + | Chr2:23838680-23838699 | None:intergenic | 40.0% | |
| GGGGTCACATTTAAGAATGT+TGG | + | Chr2:23838869-23838888 | None:intergenic | 40.0% | |
| ! | CGATAACTGAATCGGGTTTT+TGG | + | Chr2:23838786-23838805 | None:intergenic | 40.0% |
| ! | CTTTGGCAAAACCCTTTTGT+AGG | + | Chr2:23838890-23838909 | None:intergenic | 40.0% |
| ! | TTCTTGAAGCGTTTAGGAAG+CGG | - | Chr2:23839361-23839380 | MsG0280007972.01.T01:CDS | 40.0% |
| ! | TTGGCAAAACCCTTTTGTAG+GGG | + | Chr2:23838888-23838907 | None:intergenic | 40.0% |
| ACTCTTCGGCTCTTGTCAAA+AGG | - | Chr2:23839457-23839476 | MsG0280007972.01.T01:CDS | 45.0% | |
| ATCCCAACGTGATTTCGACA+TGG | + | Chr2:23839295-23839314 | None:intergenic | 45.0% | |
| GGAGAATAGGGTCATTCCAA+GGG | - | Chr2:23839503-23839522 | MsG0280007972.01.T01:CDS | 45.0% | |
| GTATGTGCAGTGTTTCAAGG+AGG | - | Chr2:23839623-23839642 | MsG0280007972.01.T01:CDS | 45.0% | |
| GTGGATGCTAGCATACACAA+TGG | + | Chr2:23839387-23839406 | None:intergenic | 45.0% | |
| GTTTCGCATTTGATCTCCAG+AGG | - | Chr2:23839534-23839553 | MsG0280007972.01.T01:CDS | 45.0% | |
| TGGAGAATAGGGTCATTCCA+AGG | - | Chr2:23839502-23839521 | MsG0280007972.01.T01:CDS | 45.0% | |
| ! | TTGGGTCAATGAGTTGGGTT+GGG | - | Chr2:23839434-23839453 | MsG0280007972.01.T01:CDS | 45.0% |
| ! | TTTGGGTCAATGAGTTGGGT+TGG | - | Chr2:23839433-23839452 | MsG0280007972.01.T01:CDS | 45.0% |
| !! | ATGGGGTTGGTCTGATGAAA+TGG | - | Chr2:23839338-23839357 | MsG0280007972.01.T01:CDS | 45.0% |
| GGCCATGTCGAAATCACGTT+GGG | - | Chr2:23839290-23839309 | MsG0280007972.01.T01:CDS | 50.0% | |
| GGTTTGATGTGAAGTGGTCG+AGG | + | Chr2:23838674-23838693 | None:intergenic | 50.0% | |
| TGCGAAACAACACAAGCCCT+TGG | + | Chr2:23839522-23839541 | None:intergenic | 50.0% | |
| TTCGGCTCTTGTCAAAAGGC+CGG | - | Chr2:23839461-23839480 | MsG0280007972.01.T01:CDS | 50.0% | |
| TTGATGTGAAGTGGTCGAGG+AGG | + | Chr2:23838671-23838690 | None:intergenic | 50.0% | |
| !! | TGAGTTGGGTTGGGACTCTT+CGG | - | Chr2:23839443-23839462 | MsG0280007972.01.T01:CDS | 50.0% |
| GGGCCATGTCGAAATCACGT+TGG | - | Chr2:23839289-23839308 | MsG0280007972.01.T01:CDS | 55.0% | |
| GGCTCTTGTCAAAAGGCCGG+AGG | - | Chr2:23839464-23839483 | MsG0280007972.01.T01:CDS | 60.0% | |
| GTGAAGTGGTCGAGGAGGAG+TGG | + | Chr2:23838666-23838685 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr2 | gene | 23838658 | 23839692 | 23838658 | ID=MsG0280007972.01;Name=MsG0280007972.01 |
| Chr2 | mRNA | 23838658 | 23839692 | 23838658 | ID=MsG0280007972.01.T01;Parent=MsG0280007972.01;Name=MsG0280007972.01.T01;_AED=0.33;_eAED=0.33;_QI=0|-1|0|1|-1|1|1|0|344 |
| Chr2 | exon | 23838658 | 23839692 | 23838658 | ID=MsG0280007972.01.T01:exon:3063;Parent=MsG0280007972.01.T01 |
| Chr2 | CDS | 23838658 | 23839692 | 23838658 | ID=MsG0280007972.01.T01:cds;Parent=MsG0280007972.01.T01 |
| Gene Sequence |
| Protein sequence |
