AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0280008014.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280008014.01.T01 MTR_2g437060 65.737 251 84 1 112 362 81 329 6.13e-111 334
MsG0280008014.01.T01 MTR_2g437060 66.234 77 26 0 409 485 232 308 7.62e-28 115
MsG0280008014.01.T01 MTR_2g437020 62.903 248 92 0 115 362 68 315 8.53e-109 328
MsG0280008014.01.T01 MTR_2g437020 67.532 77 25 0 409 485 218 294 1.02e-28 117
MsG0280008014.01.T01 MTR_2g436440 63.158 247 89 1 115 361 75 319 3.54e-103 314
MsG0280008014.01.T01 MTR_2g436440 63.636 77 28 0 409 485 223 299 5.98e-25 106
MsG0280008014.01.T01 MTR_2g437080 60.558 251 97 1 112 362 66 314 1.22e-101 310
MsG0280008014.01.T01 MTR_2g437080 61.446 83 32 0 403 485 211 293 2.16e-29 119
MsG0280008014.01.T01 MTR_2g436400 59.091 264 98 3 105 362 62 321 4.39e-101 308
MsG0280008014.01.T01 MTR_2g436400 62.963 81 30 0 405 485 220 300 5.03e-28 115
MsG0280008014.01.T01 MTR_2g437030 60.400 250 97 1 112 361 152 399 1.01e-99 308
MsG0280008014.01.T01 MTR_2g437030 61.728 81 31 0 405 485 299 379 2.10e-26 112
MsG0280008014.01.T01 MTR_2g437040 59.274 248 99 1 115 362 69 314 8.36e-98 300
MsG0280008014.01.T01 MTR_2g437040 62.069 87 33 0 399 485 207 293 1.89e-28 116
MsG0280008014.01.T01 MTR_2g437260 47.012 251 133 0 112 362 60 310 2.58e-78 250
MsG0280008014.01.T01 MTR_2g437260 45.455 88 48 0 398 485 202 289 6.19e-20 92.0
MsG0280008014.01.T01 MTR_2g437130 49.801 251 124 1 112 362 67 315 5.43e-76 244
MsG0280008014.01.T01 MTR_2g437130 76.543 81 19 0 405 485 214 294 1.79e-34 134
MsG0280008014.01.T01 MTR_2g437200 44.079 304 128 4 97 362 43 342 1.62e-75 243
MsG0280008014.01.T01 MTR_2g437200 83.951 81 13 0 405 485 241 321 1.13e-37 142
MsG0280008014.01.T01 MTR_2g437150 47.232 271 136 3 97 362 66 334 3.65e-75 242
MsG0280008014.01.T01 MTR_2g437150 76.543 81 19 0 405 485 233 313 5.24e-34 132
MsG0280008014.01.T01 MTR_2g437170 47.407 270 135 3 97 361 66 333 6.46e-75 242
MsG0280008014.01.T01 MTR_2g437170 76.543 81 19 0 405 485 233 313 5.35e-34 132
MsG0280008014.01.T01 MTR_2g437120 45.051 293 154 4 73 362 39 327 1.08e-74 241
MsG0280008014.01.T01 MTR_2g437120 75.309 81 19 1 405 485 227 306 2.52e-29 119
MsG0280008014.01.T01 MTR_4g119550 46.825 252 131 3 112 362 75 324 2.46e-74 240
MsG0280008014.01.T01 MTR_4g119550 55.422 83 37 0 403 485 221 303 2.98e-26 110
MsG0280008014.01.T01 MTR_2g437960 47.410 251 127 3 115 362 82 330 1.52e-71 233
MsG0280008014.01.T01 MTR_2g437960 79.012 81 17 0 405 485 229 309 1.08e-34 134
MsG0280008014.01.T01 MTR_2g437960 47.410 251 127 3 115 362 82 330 3.31e-71 233
MsG0280008014.01.T01 MTR_2g437960 79.012 81 17 0 405 485 229 309 1.70e-34 134
MsG0280008014.01.T01 MTR_2g076320 46.094 256 133 3 110 362 74 327 9.25e-71 231
MsG0280008014.01.T01 MTR_2g076320 74.074 81 21 0 405 485 226 306 2.38e-32 128
MsG0280008014.01.T01 MTR_2g436460 46.185 249 131 2 115 362 74 320 1.55e-70 229
MsG0280008014.01.T01 MTR_2g436460 56.250 80 34 1 407 485 220 299 1.09e-20 94.4
MsG0280008014.01.T01 MTR_2g437180 45.669 254 133 3 112 362 75 326 1.82e-70 230
MsG0280008014.01.T01 MTR_2g437180 72.840 81 22 0 405 485 225 305 1.62e-30 122
MsG0280008014.01.T01 MTR_2g438010 46.215 251 130 2 115 362 99 347 4.64e-70 229
MsG0280008014.01.T01 MTR_2g438010 71.605 81 23 0 405 485 246 326 2.96e-31 125
MsG0280008014.01.T01 MTR_2g438020 42.484 306 130 5 97 362 82 381 5.31e-70 231
MsG0280008014.01.T01 MTR_2g438020 77.778 81 18 0 405 485 280 360 1.73e-34 135
MsG0280008014.01.T01 MTR_2g437100 46.863 271 137 3 97 362 71 339 9.26e-70 228
MsG0280008014.01.T01 MTR_2g437100 80.247 81 16 0 405 485 238 318 1.26e-33 132
MsG0280008014.01.T01 MTR_2g437990 47.059 255 131 3 110 362 74 326 1.21e-69 229
MsG0280008014.01.T01 MTR_2g437990 72.840 81 22 0 405 485 225 305 1.78e-31 126
MsG0280008014.01.T01 MTR_2g437240 41.639 305 134 5 97 362 43 342 9.51e-69 226
MsG0280008014.01.T01 MTR_2g437240 79.012 81 17 0 405 485 241 321 2.93e-34 134
MsG0280008014.01.T01 MTR_2g437160 47.390 249 127 2 115 361 92 338 5.01e-68 224
MsG0280008014.01.T01 MTR_2g437160 77.778 81 18 0 405 485 238 318 1.84e-34 134
MsG0280008014.01.T01 MTR_4g120380 44.355 248 136 1 115 362 71 316 1.33e-64 214
MsG0280008014.01.T01 MTR_4g120380 46.154 104 51 1 382 485 197 295 1.42e-21 96.7
MsG0280008014.01.T01 MTR_4g120380 44.223 251 138 1 112 362 68 316 5.99e-64 213
MsG0280008014.01.T01 MTR_4g120380 46.154 104 51 1 382 485 197 295 4.37e-21 95.9
MsG0280008014.01.T01 MTR_2g019840 43.426 251 141 1 112 362 67 316 9.86e-62 207
MsG0280008014.01.T01 MTR_2g019840 50.667 75 36 1 411 485 222 295 1.06e-16 82.4
MsG0280008014.01.T01 MTR_2g019810 42.629 251 143 1 112 362 55 304 1.12e-61 206
MsG0280008014.01.T01 MTR_2g019810 49.351 77 38 1 409 485 208 283 4.24e-15 77.0
MsG0280008014.01.T01 MTR_2g437090 86.111 108 15 0 261 368 1 108 5.28e-60 195
MsG0280008014.01.T01 MTR_2g437090 51.852 81 39 0 405 485 1 81 2.02e-23 97.4
MsG0280008014.01.T01 MTR_4g119580 42.231 251 143 1 112 362 68 316 2.42e-59 200
MsG0280008014.01.T01 MTR_4g119580 49.383 81 41 0 405 485 215 295 9.91e-22 97.1
MsG0280008014.01.T01 MTR_2g437940 44.355 248 111 4 115 362 78 298 2.65e-55 189
MsG0280008014.01.T01 MTR_2g437940 77.778 81 18 0 405 485 197 277 4.40e-33 129
MsG0280008014.01.T01 MTR_2g436370 53.846 143 60 1 99 235 53 195 1.12e-38 140
MsG0280008014.01.T01 MTR_3g450500 29.588 267 181 2 110 372 60 323 1.63e-35 136
MsG0280008014.01.T01 MTR_2g437160 77.778 81 18 0 405 485 147 227 5.37e-35 133
MsG0280008014.01.T01 MTR_2g437160 47.945 146 70 3 220 361 104 247 1.91e-33 129
MsG0280008014.01.T01 MTR_4g007490 31.579 266 174 4 111 372 60 321 2.26e-34 133
MsG0280008014.01.T01 MTR_3g102480 87.097 62 8 0 1 62 3 64 5.02e-33 121
MsG0280008014.01.T01 MTR_2g013980 82.759 87 15 0 1 87 1093 1179 2.72e-31 129
MsG0280008014.01.T01 MTR_5g037350 85.294 68 10 0 20 87 484 551 1.09e-30 125
MsG0280008014.01.T01 MTR_4g119570 36.709 158 98 1 167 324 15 170 1.90e-27 110
MsG0280008014.01.T01 MTR_4g119570 50.000 66 33 0 403 468 105 170 9.87e-16 77.0
MsG0280008014.01.T01 MTR_5g024920 65.060 83 27 1 5 87 1 81 2.40e-25 110
MsG0280008014.01.T01 MTR_1g090220 57.447 94 28 1 1 82 84 177 6.53e-24 99.0
MsG0280008014.01.T01 MTR_3g467660 71.429 63 18 0 21 83 5 67 2.68e-22 97.8
MsG0280008014.01.T01 MTR_1g021865 57.143 84 29 2 1 84 110 186 1.16e-21 93.6
MsG0280008014.01.T01 MTR_2g436380 66.667 60 20 0 261 320 1 60 1.22e-19 89.4
MsG0280008014.01.T01 MTR_2g436380 60.656 61 24 0 405 465 1 61 5.33e-18 84.7
MsG0280008014.01.T01 MTR_8g080990 26.000 250 174 3 119 362 74 318 3.11e-18 86.7
MsG0280008014.01.T01 MTR_8g081000 23.904 251 178 2 119 362 87 331 4.24e-17 83.6
MsG0280008014.01.T01 MTR_8g081000 23.904 251 178 2 119 362 87 331 4.90e-17 83.2
MsG0280008014.01.T01 MTR_8g081000 23.904 251 178 2 119 362 87 331 5.85e-17 83.2
MsG0280008014.01.T01 MTR_7g025530 61.250 80 30 1 8 87 240 318 8.31e-17 84.0
MsG0280008014.01.T01 MTR_3g073740 61.290 62 20 1 46 107 8 65 3.35e-15 71.6
MsG0280008014.01.T01 MTR_6g086840 79.545 44 9 0 44 87 9 52 8.48e-15 71.6
MsG0280008014.01.T01 MTR_4g049400 40.449 89 53 0 97 185 61 149 2.52e-13 70.1
MsG0280008014.01.T01 MTR_5g031630 89.189 37 4 0 51 87 199 235 1.09e-12 70.5
MsG0280008014.01.T01 MTR_5g034890 45.000 80 19 1 8 87 166 220 2.29e-12 69.7
MsG0280008014.01.T01 MTR_3g067260 54.348 46 21 0 1 46 3 48 9.36e-11 57.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280008014.01.T01 AT5G07900 30.797 276 182 4 103 372 81 353 3.46e-38 144
MsG0280008014.01.T01 AT5G07900 35.065 77 49 1 410 485 249 325 1.51e-12 69.7
MsG0280008014.01.T01 AT1G21150 29.180 305 205 5 66 362 31 332 3.82e-34 132
MsG0280008014.01.T01 AT1G21150 29.180 305 205 5 66 362 95 396 8.10e-34 133
MsG0280008014.01.T01 AT1G21150 29.600 250 171 2 117 362 48 296 1.45e-32 127
MsG0280008014.01.T01 AT5G64950 27.559 254 177 3 115 362 65 317 7.81e-23 100
MsG0280008014.01.T01 AT3G46950 31.835 267 166 8 72 333 36 291 1.75e-21 97.4
MsG0280008014.01.T01 AT1G61970 27.707 314 173 10 97 367 62 364 4.83e-19 89.7
MsG0280008014.01.T01 AT1G61970 27.707 314 173 10 97 367 62 364 4.83e-19 89.7
MsG0280008014.01.T01 AT1G61970 27.707 314 173 10 97 367 62 364 4.83e-19 89.7
MsG0280008014.01.T01 AT1G61970 27.707 314 173 10 97 367 62 364 4.83e-19 89.7
MsG0280008014.01.T01 AT1G61970 27.707 314 173 10 97 367 62 364 4.83e-19 89.7
MsG0280008014.01.T01 AT1G61970 27.707 314 173 10 97 367 62 364 4.83e-19 89.7
MsG0280008014.01.T01 AT1G61970 27.707 314 173 10 97 367 62 364 4.83e-19 89.7
MsG0280008014.01.T01 AT1G62120 27.778 306 164 10 112 372 79 372 8.52e-19 89.4
MsG0280008014.01.T01 AT1G61980 26.190 294 175 6 112 367 75 364 1.07e-18 88.6
MsG0280008014.01.T01 AT1G61980 26.190 294 175 6 112 367 75 364 1.07e-18 88.6
MsG0280008014.01.T01 AT1G61980 26.190 294 175 6 112 367 75 364 1.07e-18 88.6
MsG0280008014.01.T01 AT1G61990 25.705 319 173 8 97 372 62 359 7.83e-18 85.9
MsG0280008014.01.T01 AT1G61990 25.705 319 173 8 97 372 62 359 7.83e-18 85.9
MsG0280008014.01.T01 AT1G62085 28.700 223 152 4 112 330 78 297 6.30e-15 77.4
MsG0280008014.01.T01 AT1G62085 28.700 223 152 4 112 330 78 297 6.30e-15 77.4
MsG0280008014.01.T01 AT1G61960 27.500 240 162 5 97 331 62 294 1.21e-14 76.6
MsG0280008014.01.T01 AT1G62110 27.074 229 156 5 97 320 62 284 1.48e-14 76.3
MsG0280008014.01.T01 AT1G62010 24.390 287 174 6 122 372 71 350 1.49e-14 75.9
MsG0280008014.01.T01 AT5G23930 28.000 225 152 5 97 320 65 280 1.27e-13 73.2
MsG0280008014.01.T01 AT1G62150 24.790 238 170 6 97 330 68 300 1.52e-12 70.1

Find 120 sgRNAs with CRISPR-Local

Find 446 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATCAACAACTTGATGTTATT+TGG 0.104270 2:-24306279 None:intergenic
CACTAAATTTAATTTATTAA+TGG 0.141687 2:-24306577 None:intergenic
GAAATTGCTGGAGGAATTAA+AGG 0.197979 2:+24306386 MsG0280008014.01.T01:CDS
TCATACCTCATCCACACTTT+TGG 0.211595 2:+24305870 MsG0280008014.01.T01:CDS
TTGGAGGAAGTTAAGGGTTT+AGG 0.213631 2:+24311293 MsG0280008014.01.T01:CDS
GCTGGAGGAATTAAAGGTTT+TGG 0.234696 2:+24306392 MsG0280008014.01.T01:CDS
TGGAGGAAGTTAAGGGTTTA+GGG 0.236533 2:+24311294 MsG0280008014.01.T01:CDS
CATCCTTCAACAACTACTTT+TGG 0.271023 2:+24311320 MsG0280008014.01.T01:CDS
GTTCACAATCGAAATTTCTT+TGG 0.274752 2:+24306243 MsG0280008014.01.T01:CDS
AAACTTTGGGAGAATCCTTT+TGG 0.281439 2:-24306061 None:intergenic
TAGAAAAGTTGGTAGAAAAT+AGG 0.289483 2:+24305110 MsG0280008014.01.T01:CDS
TTGGGTTAATGAGTTGGGTT+GGG 0.307235 2:+24306608 MsG0280008014.01.T01:CDS
AGACCAACCCCATTTCTTAA+AGG 0.312139 2:-24306502 None:intergenic
GAAAATAGGCTTAGATGGTT+TGG 0.322680 2:+24305124 MsG0280008014.01.T01:CDS
CTTTGGCAATTAGTGCTAGA+TGG 0.328181 2:-24306440 None:intergenic
TAACTCATTGGAGGAAGTTA+AGG 0.330911 2:+24311286 MsG0280008014.01.T01:CDS
ATAAATTCGACTAAGGATTT+CGG 0.338569 2:-24308314 None:intergenic
ATTGAAGTCAGCATCAAATA+AGG 0.342231 2:-24311458 None:intergenic
AACTCAACCTTGCATACAAC+TGG 0.348191 2:+24312118 MsG0280008014.01.T01:three_prime_UTR
ATCAATTGGTTGGAATTCAT+TGG 0.348801 2:+24311516 MsG0280008014.01.T01:CDS
CAAAGGATTGATTAACTCAT+TGG 0.349114 2:+24311274 MsG0280008014.01.T01:intron
TGGTAGAAAATAGGCTTAGA+TGG 0.349489 2:+24305119 MsG0280008014.01.T01:CDS
CTCATGCAACTTTAATAGAT+AGG 0.352672 2:-24312091 None:intergenic
AAGATGTTATTCATGCATTT+CGG 0.356695 2:+24311429 MsG0280008014.01.T01:CDS
AAGTTGACGTCTTTAAGAAA+TGG 0.368639 2:+24311393 MsG0280008014.01.T01:CDS
AACCATTAGAAAAGATTTAG+AGG 0.369865 2:+24305252 MsG0280008014.01.T01:CDS
AGTTGACACCTTTAAGAAAT+GGG 0.372153 2:+24306494 MsG0280008014.01.T01:CDS
AGTTGACGTCTTTAAGAAAT+GGG 0.373920 2:+24311394 MsG0280008014.01.T01:CDS
TTGCTATCATATCGCGTAGT+TGG 0.375323 2:-24306008 None:intergenic
AAGTTGACACCTTTAAGAAA+TGG 0.378023 2:+24306493 MsG0280008014.01.T01:CDS
AAACTAGACATAATAGGATT+AGG 0.384458 2:+24305047 MsG0280008014.01.T01:CDS
TTTGTAAGTGGAGCGGAGTT+TGG 0.395432 2:-24305913 None:intergenic
GTCAGAGGTAGAAGCACCTT+TGG 0.398022 2:-24306097 None:intergenic
TTTAGCAGGAATTGCACAAT+TGG 0.403154 2:-24306703 None:intergenic
TTCGCAGACCTTTCTTTAGC+AGG 0.407615 2:-24306717 None:intergenic
AGATCAAATGGAGGAGAGTC+AGG 0.409734 2:+24305189 MsG0280008014.01.T01:CDS
AGCAATTTCAGCATGTCTCC+TGG 0.410103 2:-24306372 None:intergenic
AGGAGACATGCTGAAATTGC+TGG 0.412023 2:+24306374 MsG0280008014.01.T01:CDS
TGCTATCATATCGCGTAGTT+GGG 0.412806 2:-24306007 None:intergenic
TTAGCAGGAATTGCACAATT+GGG 0.419770 2:-24306702 None:intergenic
CTGCACAAGCAAGGGTGTCC+CGG 0.429389 2:-24306221 None:intergenic
TTGATCTACTCTTCTTAAAA+CGG 0.429449 2:-24305173 None:intergenic
AATGGTACCAACCTATGAAT+TGG 0.430323 2:+24306176 MsG0280008014.01.T01:CDS
TGCACAAGCAAGGGTGTCCC+GGG 0.430444 2:-24306220 None:intergenic
TTAGTTTCGAAGCATTTAGA+AGG 0.432351 2:+24306532 MsG0280008014.01.T01:CDS
GTGGTAAAACTAGACATAAT+AGG 0.436176 2:+24305041 MsG0280008014.01.T01:CDS
AATTGCACAATTGGGGCCCT+TGG 0.436231 2:-24306694 None:intergenic
AAGAATTTGAGAACAGAGTC+AGG 0.439273 2:-24305961 None:intergenic
TCTTCTTAAAACGGCATCTA+CGG 0.441181 2:-24305164 None:intergenic
TGTCAACTTTATCTTTCCAT+AGG 0.441802 2:-24306479 None:intergenic
ATCAAGTTGTTGATCAAGAA+TGG 0.442244 2:+24306288 MsG0280008014.01.T01:CDS
AACTCATTGGAGGAAGTTAA+GGG 0.448139 2:+24311287 MsG0280008014.01.T01:CDS
AAAGCTTATAAATTCGACTA+AGG 0.451735 2:-24308321 None:intergenic
AGTCAGGTTAAAAGAGGTAG+AGG 0.455911 2:+24305205 MsG0280008014.01.T01:CDS
ATTCCAAAAGTAGTTGTTGA+AGG 0.457781 2:-24311323 None:intergenic
GAATGTATACGCCAATTCAT+AGG 0.459605 2:-24306187 None:intergenic
CCTGGACCTGAATATAATAT+CGG 0.461092 2:-24306354 None:intergenic
CTCAAATTCTTTAGAAACCA+TGG 0.462943 2:+24305973 MsG0280008014.01.T01:CDS
TTTGGGTTAATGAGTTGGGT+TGG 0.469434 2:+24306607 MsG0280008014.01.T01:CDS
TTTAAGAAGAGTAGATCAAA+TGG 0.476734 2:+24305177 MsG0280008014.01.T01:CDS
TTAGAAGATTGCTTCGTAGC+AGG 0.479908 2:+24306328 MsG0280008014.01.T01:CDS
GAGGTATGAGACAGGAAAAG+AGG 0.480390 2:-24305856 None:intergenic
CGGAGTTTGGAAGCAAATTG+TGG 0.486128 2:-24305900 None:intergenic
AGCACCTATAATAGAAAAGT+TGG 0.487508 2:+24305099 MsG0280008014.01.T01:CDS
CACAATTGGGGCCCTTGGAA+TGG 0.496085 2:-24306689 None:intergenic
TTGAAACAGAGCTTTGTAAG+TGG 0.502341 2:-24305925 None:intergenic
GTGTGGATGAGGTATGAGAC+AGG 0.506109 2:-24305864 None:intergenic
GTCAACTTTATCTTTCCATA+GGG 0.508818 2:-24306478 None:intergenic
GAGGAGAGTCAGGTTAAAAG+AGG 0.517218 2:+24305199 MsG0280008014.01.T01:CDS
TGCAAGCCTCAACAATCAAA+TGG 0.519324 2:+24306158 MsG0280008014.01.T01:CDS
CAAGTATAAACAAAACCCTA+TGG 0.520595 2:+24306463 MsG0280008014.01.T01:CDS
GTGCAATTCCTGCTAAAGAA+AGG 0.527981 2:+24306709 MsG0280008014.01.T01:CDS
GTTCATCATATGTTTATCAA+AGG 0.528187 2:+24312051 MsG0280008014.01.T01:three_prime_UTR
AAGAAGAGTAGATCAAATGG+AGG 0.530085 2:+24305180 MsG0280008014.01.T01:CDS
TACATTCTTGAAATCTCCCC+GGG 0.530135 2:+24306203 MsG0280008014.01.T01:CDS
ATTGCTTTGATGGCCAAGAA+AGG 0.530580 2:+24311344 MsG0280008014.01.T01:CDS
CCGATATTATATTCAGGTCC+AGG 0.533051 2:+24306354 MsG0280008014.01.T01:CDS
GGAGTTTGGAAGCAAATTGT+GGG 0.535188 2:-24305899 None:intergenic
AGGAGTCCGATATTATATTC+AGG 0.536731 2:+24306348 MsG0280008014.01.T01:CDS
AGGCTTGCAGAAAGTACTGT+AGG 0.538796 2:-24306144 None:intergenic
TTTCCTACGACCCCTCCAAA+AGG 0.539446 2:+24306046 MsG0280008014.01.T01:CDS
CTTCTTAAAACGGCATCTAC+GGG 0.545650 2:-24305163 None:intergenic
AGGATTGATTAACTCATTGG+AGG 0.546498 2:+24311277 MsG0280008014.01.T01:intron
TGACACCATTAGAGAGGGAG+TGG 0.551247 2:+24305072 MsG0280008014.01.T01:CDS
GATTGTGAACTGCACAAGCA+AGG 0.555573 2:-24306230 None:intergenic
TTGGTACCATTTGATTGTTG+AGG 0.560248 2:-24306164 None:intergenic
CAAACCCAAAAGTGTGGATG+AGG 0.564763 2:-24305875 None:intergenic
CTGTAGGGTTCTTACTGACA+AGG 0.566513 2:-24306128 None:intergenic
TAGCAGGAATTGCACAATTG+GGG 0.567455 2:-24306701 None:intergenic
CAATCTTCTAATGTTTGAGT+CGG 0.570421 2:-24306316 None:intergenic
GTTGACACCTTTAAGAAATG+GGG 0.582694 2:+24306495 MsG0280008014.01.T01:CDS
ACACCATTAGAGAGGGAGTG+GGG 0.588486 2:+24305074 MsG0280008014.01.T01:CDS
ATACATTCTTGAAATCTCCC+CGG 0.589953 2:+24306202 MsG0280008014.01.T01:CDS
ATTGTGAACTGCACAAGCAA+GGG 0.590606 2:-24306229 None:intergenic
GGCTTGCAGAAAGTACTGTA+GGG 0.597518 2:-24306143 None:intergenic
CGGAGACGAGGATGTTGCGA+TGG 0.606894 2:+24305014 None:intergenic
GACAAGGTTAATTATGTCAG+AGG 0.608838 2:-24306112 None:intergenic
AAAGTGATGGATGTATAGCA+AGG 0.609281 2:-24306641 None:intergenic
GTATACGCCAATTCATAGGT+TGG 0.610841 2:-24306183 None:intergenic
ACACCTTTAAGAAATGGGGT+TGG 0.612652 2:+24306499 MsG0280008014.01.T01:CDS
GTTTCGAAGCATTTAGAAGG+CGG 0.612948 2:+24306535 MsG0280008014.01.T01:CDS
GTTGACGTCTTTAAGAAATG+GGG 0.614153 2:+24311395 MsG0280008014.01.T01:CDS
AAGTGATGGATGTATAGCAA+GGG 0.614826 2:-24306640 None:intergenic
CTATCTATTAAAGTTGCATG+AGG 0.617842 2:+24312092 MsG0280008014.01.T01:three_prime_UTR
ACGTCTTTAAGAAATGGGGT+TGG 0.618032 2:+24311399 MsG0280008014.01.T01:CDS
TAGGAATGACACCATTAGAG+AGG 0.621119 2:+24305066 MsG0280008014.01.T01:CDS
GACACCATTAGAGAGGGAGT+GGG 0.622533 2:+24305073 MsG0280008014.01.T01:CDS
GTTGGGAATCAAAGAAACCA+TGG 0.627807 2:-24305990 None:intergenic
AGGAATGACACCATTAGAGA+GGG 0.631095 2:+24305067 MsG0280008014.01.T01:CDS
CACCATTAGAGAGGGAGTGG+GGG 0.637819 2:+24305075 MsG0280008014.01.T01:CDS
ATATGATAGCAAAGGAACCA+CGG 0.644411 2:+24306019 MsG0280008014.01.T01:CDS
AGGATGTTGCGATGGATGAG+TGG 0.654871 2:+24305022 None:intergenic
GTTTATCAAAGGTATTAACA+AGG 0.657876 2:+24312062 MsG0280008014.01.T01:three_prime_UTR
ATGGATACTAACATACACTC+AGG 0.661010 2:-24306558 None:intergenic
ACAGAGCTTTGTAAGTGGAG+CGG 0.661541 2:-24305920 None:intergenic
ACTACGCGATATGATAGCAA+AGG 0.670470 2:+24306011 MsG0280008014.01.T01:CDS
GCACAAGCAAGGGTGTCCCG+GGG 0.672396 2:-24306219 None:intergenic
AGACATGCTGAAATTGCTGG+AGG 0.684530 2:+24306377 MsG0280008014.01.T01:CDS
GTGGGTCAAACCCAAAAGTG+TGG 0.687501 2:-24305881 None:intergenic
GGGTCGTAGGAAAGCAACCG+TGG 0.691126 2:-24306036 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTTCAACATAATATATTAA+CGG - Chr2:24305459-24305478 None:intergenic 10.0%
!! TAGAAATATACATAAAATAA+AGG - Chr2:24305436-24305455 None:intergenic 10.0%
!! TGTAAAAAAAAATTTGAATT+CGG + Chr2:24309492-24309511 MsG0280008014.01.T01:intron 10.0%
!!! AAAAGATTTTTTAAAAATTC+TGG - Chr2:24310032-24310051 None:intergenic 10.0%
!!! AAATAAAATCGAATATTTTT+TGG - Chr2:24309933-24309952 None:intergenic 10.0%
!!! ATATAACTTTCATATTTTAT+TGG - Chr2:24309907-24309926 None:intergenic 10.0%
!!! ATTTTCAAAATAACAAAATT+AGG + Chr2:24310125-24310144 MsG0280008014.01.T01:intron 10.0%
!!! CACTAAATTTAATTTATTAA+TGG - Chr2:24306580-24306599 None:intergenic 10.0%
!!! TTCAGATTTTTAAAATTAAA+AGG - Chr2:24309868-24309887 None:intergenic 10.0%
!! AAAATACTATTAACCTTATT+TGG + Chr2:24310327-24310346 MsG0280008014.01.T01:intron 15.0%
!! AGAAAAAAAATTGAAACTTT+GGG - Chr2:24306077-24306096 None:intergenic 15.0%
!! AGTGAAAAAAAAAAAAAAAG+TGG - Chr2:24307761-24307780 None:intergenic 15.0%
!! ATCATTAGTACAAATAATTA+TGG + Chr2:24307288-24307307 MsG0280008014.01.T01:intron 15.0%
!! CAAATATAATAACTTAACTT+TGG - Chr2:24310413-24310432 None:intergenic 15.0%
!! TATATTATGTTGAAATAAAC+TGG + Chr2:24305463-24305482 MsG0280008014.01.T01:intron 15.0%
!! TGTTATATCAAAAACATATT+TGG - Chr2:24305292-24305311 None:intergenic 15.0%
!!! AAATTTAGTGATGAATTTTT+GGG + Chr2:24306590-24306609 MsG0280008014.01.T01:CDS 15.0%
!!! ATAATTTTTTCGTTTTTTAG+AGG + Chr2:24310272-24310291 MsG0280008014.01.T01:intron 15.0%
!!! ATTTTCAACAAATAATAAAC+AGG - Chr2:24307972-24307991 None:intergenic 15.0%
!!! TAAATTTAGTGATGAATTTT+TGG + Chr2:24306589-24306608 MsG0280008014.01.T01:CDS 15.0%
!!! TTCAAAATGATTTTTTTGAA+AGG + Chr2:24309272-24309291 MsG0280008014.01.T01:intron 15.0%
!!! TTCAAATTTTTTTTTACAAG+AGG - Chr2:24309490-24309509 None:intergenic 15.0%
!!! TTTTGAATTTTAACCAAATA+AGG - Chr2:24310343-24310362 None:intergenic 15.0%
!! AAATGTATTCAAATCGAATA+AGG - Chr2:24306944-24306963 None:intergenic 20.0%
!! AACTAACATTTATGTACTAA+AGG - Chr2:24307009-24307028 None:intergenic 20.0%
!! AATTGATATTAGACACAATA+AGG - Chr2:24311182-24311201 None:intergenic 20.0%
!! ATACCTAATAATAGTACTTA+AGG - Chr2:24307707-24307726 None:intergenic 20.0%
!! ATGGATAAATGCAAAAATTA+TGG + Chr2:24307307-24307326 MsG0280008014.01.T01:intron 20.0%
!! GAGAAAAAAAATTGAAACTT+TGG - Chr2:24306078-24306097 None:intergenic 20.0%
!! TACTTAATAATTCAAAACGA+GGG - Chr2:24311084-24311103 None:intergenic 20.0%
!! TCAATGCTAAATTAGATATT+TGG - Chr2:24309069-24309088 None:intergenic 20.0%
!!! AAAAGTGTCTTATAGTATAA+GGG + Chr2:24310303-24310322 MsG0280008014.01.T01:intron 20.0%
!!! AAGTGTTTTAAGATATGAAT+TGG - Chr2:24308984-24309003 None:intergenic 20.0%
!!! AATACAAATCACTTTTAGTT+TGG + Chr2:24309464-24309483 MsG0280008014.01.T01:intron 20.0%
!!! ACAAATGTTTTCTTATAGTT+TGG + Chr2:24311555-24311574 MsG0280008014.01.T01:intron 20.0%
!!! ACAACAAATTTTGTTGTATT+TGG - Chr2:24308698-24308717 None:intergenic 20.0%
!!! ACGTTTTATTTAGTTCTTAA+AGG + Chr2:24308109-24308128 MsG0280008014.01.T01:intron 20.0%
!!! ATGTTGAAATTTTGTTACAT+TGG + Chr2:24307111-24307130 MsG0280008014.01.T01:intron 20.0%
!!! ATTTGTAGTTTTGTTTCTTT+TGG + Chr2:24307478-24307497 MsG0280008014.01.T01:intron 20.0%
!!! CGTTTTATTTAGTTCTTAAA+GGG + Chr2:24308110-24308129 MsG0280008014.01.T01:intron 20.0%
!!! TTATACTATAAGACACTTTT+GGG - Chr2:24310303-24310322 None:intergenic 20.0%
!!! TTTCAATTTTTTTTCTCCAA+AGG + Chr2:24306081-24306100 MsG0280008014.01.T01:CDS 20.0%
!!! TTTTTAGTACATAATGTGAT+TGG + Chr2:24306961-24306980 MsG0280008014.01.T01:intron 20.0%
! AAAAAAAACCATCTTCAACA+TGG - Chr2:24310595-24310614 None:intergenic 25.0%
! AAAAAAGTGGTAAACAGAAT+AGG - Chr2:24307748-24307767 None:intergenic 25.0%
! AAACTAGACATAATAGGATT+AGG + Chr2:24305047-24305066 MsG0280008014.01.T01:CDS 25.0%
! AAACTTATAGCAAAAAGTGA+TGG - Chr2:24306657-24306676 None:intergenic 25.0%
! AAAGCTTATAAATTCGACTA+AGG - Chr2:24308324-24308343 None:intergenic 25.0%
! AAATGCAAAAATTATGGTTG+TGG + Chr2:24307313-24307332 MsG0280008014.01.T01:intron 25.0%
! AAATTCCGCTAATTAATGAA+TGG - Chr2:24311790-24311809 None:intergenic 25.0%
! AACAAATAATAAACAGGATC+AGG - Chr2:24307966-24307985 None:intergenic 25.0%
! AACCATTAGAAAAGATTTAG+AGG + Chr2:24305252-24305271 MsG0280008014.01.T01:CDS 25.0%
! AAGATGTTATTCATGCATTT+CGG + Chr2:24311429-24311448 MsG0280008014.01.T01:CDS 25.0%
! AAGGTATGAGTAAAAAACTT+TGG + Chr2:24311363-24311382 MsG0280008014.01.T01:CDS 25.0%
! AATACCTGAAAATATGATCA+TGG - Chr2:24306895-24306914 None:intergenic 25.0%
! AATGAAAATTGCATACACAA+TGG + Chr2:24311750-24311769 MsG0280008014.01.T01:intron 25.0%
! AATTACTCTACTAGGTTATA+AGG - Chr2:24307632-24307651 None:intergenic 25.0%
! AGGTATGAGTAAAAAACTTT+GGG + Chr2:24311364-24311383 MsG0280008014.01.T01:CDS 25.0%
! ATAAATTCGACTAAGGATTT+CGG - Chr2:24308317-24308336 None:intergenic 25.0%
! ATAGGTTGCTTGATTTAAAA+TGG + Chr2:24307227-24307246 MsG0280008014.01.T01:intron 25.0%
! ATCAAAAGCTTTCTTCATAT+AGG - Chr2:24307814-24307833 None:intergenic 25.0%
! ATCAACAACTTGATGTTATT+TGG - Chr2:24306282-24306301 None:intergenic 25.0%
! ATTACTCTACTAGGTTATAA+GGG - Chr2:24307631-24307650 None:intergenic 25.0%
! CAGTTTAAACATTGTATCAA+GGG + Chr2:24308952-24308971 MsG0280008014.01.T01:intron 25.0%
! CGAAGAACACATAAAATTAA+AGG + Chr2:24309379-24309398 MsG0280008014.01.T01:intron 25.0%
! CTACTTAATAATTCAAAACG+AGG - Chr2:24311085-24311104 None:intergenic 25.0%
! CTGTAACTTTGTAAATTCAA+TGG - Chr2:24310469-24310488 None:intergenic 25.0%
! CTTAGCAAAATTGTTTGTTT+AGG + Chr2:24308884-24308903 MsG0280008014.01.T01:intron 25.0%
! CTTTGATTCATGTATTGTTT+AGG + Chr2:24308290-24308309 MsG0280008014.01.T01:intron 25.0%
! GAAAACCACAAATAAGTTAA+GGG + Chr2:24305392-24305411 MsG0280008014.01.T01:intron 25.0%
! GAAACCTTTAACTAATTTGA+GGG - Chr2:24305701-24305720 None:intergenic 25.0%
! GAGAAAATACAGAAATGAAA+CGG - Chr2:24308005-24308024 None:intergenic 25.0%
! GGATAGAAAAAATGAAACTT+TGG - Chr2:24310978-24310997 None:intergenic 25.0%
! GGTCATCAAAATATATTCAT+TGG - Chr2:24308527-24308546 None:intergenic 25.0%
! GTTCATCATATGTTTATCAA+AGG + Chr2:24312051-24312070 MsG0280008014.01.T01:three_prime_UTR 25.0%
! TAAATTCAATGGTTGTTAAC+CGG - Chr2:24310458-24310477 None:intergenic 25.0%
! TAACAATGGAACAATATAAG+AGG - Chr2:24311014-24311033 None:intergenic 25.0%
! TGAAAACCACAAATAAGTTA+AGG + Chr2:24305391-24305410 MsG0280008014.01.T01:intron 25.0%
! TGACCTTAAGTACTATTATT+AGG + Chr2:24307701-24307720 MsG0280008014.01.T01:intron 25.0%
! TGCTATAAGTTTGGAAAAAA+AGG + Chr2:24306665-24306684 MsG0280008014.01.T01:CDS 25.0%
! TGTTTATGACTATATACACA+GGG - Chr2:24308755-24308774 None:intergenic 25.0%
! TTCTAATTTCACATATCAGT+TGG - Chr2:24308603-24308622 None:intergenic 25.0%
! TTGATCTACTCTTCTTAAAA+CGG - Chr2:24305176-24305195 None:intergenic 25.0%
! TTGTTTATGACTATATACAC+AGG - Chr2:24308756-24308775 None:intergenic 25.0%
! TTTAAGAAGAGTAGATCAAA+TGG + Chr2:24305177-24305196 MsG0280008014.01.T01:CDS 25.0%
! TTTCTTATAGTTTGGAGAAA+AGG + Chr2:24311563-24311582 MsG0280008014.01.T01:intron 25.0%
!! AATCTTTTTGTCAATGAACT+CGG - Chr2:24309147-24309166 None:intergenic 25.0%
!! ACTAAAAGTGATTTGTATTC+CGG - Chr2:24309463-24309482 None:intergenic 25.0%
!! AGTTATTGATTGTTTATGTC+TGG + Chr2:24305519-24305538 MsG0280008014.01.T01:intron 25.0%
!! ATTTTCTCAGAATAAGCAAA+TGG - Chr2:24311663-24311682 None:intergenic 25.0%
!! CACTTAATTTTGTCACATAT+TGG + Chr2:24307451-24307470 MsG0280008014.01.T01:intron 25.0%
!! CTTATACTATAAGACACTTT+TGG - Chr2:24310304-24310323 None:intergenic 25.0%
!! CTTATTTGTGGTTTTCAATT+TGG - Chr2:24305388-24305407 None:intergenic 25.0%
!! GACACAAATTTGTCAAATTT+TGG + Chr2:24308800-24308819 MsG0280008014.01.T01:intron 25.0%
!! TATGCAATTTCTTTTGATGA+AGG + Chr2:24311606-24311625 MsG0280008014.01.T01:intron 25.0%
!! TCGTATCTCATCAATAATTT+TGG + Chr2:24310772-24310791 MsG0280008014.01.T01:intron 25.0%
!! TCTACCAACTTTTCTATTAT+AGG - Chr2:24305106-24305125 None:intergenic 25.0%
!! TGAAATTTTGTTACATTGGT+AGG + Chr2:24307115-24307134 MsG0280008014.01.T01:intron 25.0%
!! TGATTCGTTAATGAGTTTTT+GGG + Chr2:24311490-24311509 MsG0280008014.01.T01:CDS 25.0%
!! TTAGGTTGTATATTAGCAAA+GGG + Chr2:24308902-24308921 MsG0280008014.01.T01:intron 25.0%
!!! AATTTTTGGGTTAATGAGTT+GGG + Chr2:24306603-24306622 MsG0280008014.01.T01:CDS 25.0%
!!! ACTTTGGTAATAACATTTTG+TGG - Chr2:24310962-24310981 None:intergenic 25.0%
!!! ATCACTTTTTGCTATAAGTT+TGG + Chr2:24306656-24306675 MsG0280008014.01.T01:CDS 25.0%
!!! CAAAAGTGTCTTATAGTATA+AGG + Chr2:24310302-24310321 MsG0280008014.01.T01:intron 25.0%
!!! CTCGTTTTGAATTATTAAGT+AGG + Chr2:24311083-24311102 MsG0280008014.01.T01:intron 25.0%
!!! CTTTGGTAATAACATTTTGT+GGG - Chr2:24310961-24310980 None:intergenic 25.0%
!!! GTTTATCAAAGGTATTAACA+AGG + Chr2:24312062-24312081 MsG0280008014.01.T01:three_prime_UTR 25.0%
!!! TAATTTATGAAGTATCGTGT+AGG + Chr2:24309223-24309242 MsG0280008014.01.T01:intron 25.0%
!!! TAGAAAAGTTGGTAGAAAAT+AGG + Chr2:24305110-24305129 MsG0280008014.01.T01:CDS 25.0%
!!! TTAGTTTGCTATGTATGAAA+CGG + Chr2:24307871-24307890 MsG0280008014.01.T01:intron 25.0%
!!! TTGATTCGTTAATGAGTTTT+TGG + Chr2:24311489-24311508 MsG0280008014.01.T01:CDS 25.0%
!!! TTTAGGTTGTATATTAGCAA+AGG + Chr2:24308901-24308920 MsG0280008014.01.T01:intron 25.0%
!!! TTTGGTAATAACATTTTGTG+GGG - Chr2:24310960-24310979 None:intergenic 25.0%
!!! TTTTTTACTCATACCTTTCT+TGG - Chr2:24311360-24311379 None:intergenic 25.0%
AAATAAACTGGAAAACAGTC+AGG + Chr2:24305475-24305494 MsG0280008014.01.T01:intron 30.0%
AAATGCAGAGAAAATGGTAA+TGG - Chr2:24305813-24305832 None:intergenic 30.0%
AAATTCAATGGTTGTTAACC+GGG - Chr2:24310457-24310476 None:intergenic 30.0%
AACTAATTTGAGGGAGAAAA+GGG - Chr2:24305692-24305711 None:intergenic 30.0%
AACTTCTCAGACATTACAAA+AGG - Chr2:24312031-24312050 None:intergenic 30.0%
AAGGATACTACAAAATATGC+CGG - Chr2:24307943-24307962 None:intergenic 30.0%
AATAATAAACAGGATCAGGA+AGG - Chr2:24307962-24307981 None:intergenic 30.0%
AATATCACCACAAATATACC+AGG - Chr2:24307575-24307594 None:intergenic 30.0%
AATGCAGAGAAAATGGTAAT+GGG - Chr2:24305812-24305831 None:intergenic 30.0%
AATTATGGTTGTGGTACAAT+TGG + Chr2:24307322-24307341 MsG0280008014.01.T01:intron 30.0%
AATTTCTTGACACTGTTAGT+TGG + Chr2:24307648-24307667 MsG0280008014.01.T01:intron 30.0%
AGAAAACATTTGTGACAGTT+TGG - Chr2:24311548-24311567 None:intergenic 30.0%
AGATTCAGTTATACCTCAAT+AGG + Chr2:24307209-24307228 MsG0280008014.01.T01:intron 30.0%
AGCACCTATAATAGAAAAGT+TGG + Chr2:24305099-24305118 MsG0280008014.01.T01:CDS 30.0%
AGTGATAACTAATAACAACC+TGG - Chr2:24308436-24308455 None:intergenic 30.0%
ATAAGAGGAATAAGCATCTT+TGG - Chr2:24310999-24311018 None:intergenic 30.0%
ATAGTCCCTTAACTTATTTG+TGG - Chr2:24305400-24305419 None:intergenic 30.0%
ATATCACCACAAATATACCA+GGG - Chr2:24307574-24307593 None:intergenic 30.0%
ATCAATTGGTTGGAATTCAT+TGG + Chr2:24311516-24311535 MsG0280008014.01.T01:CDS 30.0%
ATGATTCCATAACAACTTTC+TGG - Chr2:24310619-24310638 None:intergenic 30.0%
ATTAGACACAATAAGGTGAT+AGG - Chr2:24311175-24311194 None:intergenic 30.0%
ATTATGGTTGTGGTACAATT+GGG + Chr2:24307323-24307342 MsG0280008014.01.T01:intron 30.0%
ATTCAAATCGAATAAGGAAC+AGG - Chr2:24306938-24306957 None:intergenic 30.0%
ATTCCAAAAGTAGTTGTTGA+AGG - Chr2:24311326-24311345 None:intergenic 30.0%
ATTGAAGTCAGCATCAAATA+AGG - Chr2:24311461-24311480 None:intergenic 30.0%
ATTGTTTGCCTAATTCGATA+TGG + Chr2:24311130-24311149 MsG0280008014.01.T01:intron 30.0%
CAAAAGAAATTGCATAACTG+AGG - Chr2:24311602-24311621 None:intergenic 30.0%
CAAACAAGACCATCTATATT+TGG + Chr2:24311249-24311268 MsG0280008014.01.T01:intron 30.0%
CAAAGGATTGATTAACTCAT+TGG + Chr2:24311274-24311293 MsG0280008014.01.T01:intron 30.0%
CAAGTATAAACAAAACCCTA+TGG + Chr2:24306463-24306482 MsG0280008014.01.T01:CDS 30.0%
CAATCTTCTAATGTTTGAGT+CGG - Chr2:24306319-24306338 None:intergenic 30.0%
CCAGTTTAAACATTGTATCA+AGG + Chr2:24308951-24308970 MsG0280008014.01.T01:intron 30.0%
CCTTGATACAATGTTTAAAC+TGG - Chr2:24308954-24308973 None:intergenic 30.0%
CGAAACCTTTAACTAATTTG+AGG - Chr2:24305702-24305721 None:intergenic 30.0%
CTATCTATTAAAGTTGCATG+AGG + Chr2:24312092-24312111 MsG0280008014.01.T01:three_prime_UTR 30.0%
CTCATGCAACTTTAATAGAT+AGG - Chr2:24312094-24312113 None:intergenic 30.0%
CTGAATCTGCATTAGATTAT+CGG - Chr2:24307197-24307216 None:intergenic 30.0%
GAACAGGATTAACATTGTTA+AGG - Chr2:24306922-24306941 None:intergenic 30.0%
GCATTGTAATTCATATCAGT+TGG - Chr2:24307504-24307523 None:intergenic 30.0%
GTCAACTTTATCTTTCCATA+GGG - Chr2:24306481-24306500 None:intergenic 30.0%
GTGGTAAAACTAGACATAAT+AGG + Chr2:24305041-24305060 MsG0280008014.01.T01:CDS 30.0%
GTTCACAATCGAAATTTCTT+TGG + Chr2:24306243-24306262 MsG0280008014.01.T01:CDS 30.0%
GTTTATGACTATATACACAG+GGG - Chr2:24308754-24308773 None:intergenic 30.0%
TAACTAATTTGAGGGAGAAA+AGG - Chr2:24305693-24305712 None:intergenic 30.0%
TAATTCTTAAAAATGCCCCT+AGG + Chr2:24309527-24309546 MsG0280008014.01.T01:intron 30.0%
TAGCAGATTCAAAATCAAGA+TGG - Chr2:24308548-24308567 None:intergenic 30.0%
TCAACATTTACGTGTATTAC+TGG - Chr2:24307098-24307117 None:intergenic 30.0%
TCCTTTGAACCAAATATAGA+TGG - Chr2:24311261-24311280 None:intergenic 30.0%
TCGGACTAAATAAACATGAA+AGG - Chr2:24307178-24307197 None:intergenic 30.0%
TCGTTCAAAATGATTAGCAT+TGG + Chr2:24309332-24309351 MsG0280008014.01.T01:intron 30.0%
TCTTATCTCATCGACAAATT+CGG + Chr2:24311880-24311899 MsG0280008014.01.T01:intron 30.0%
TGATTCCATAACAACTTTCT+GGG - Chr2:24310618-24310637 None:intergenic 30.0%
TGTCAACTTTATCTTTCCAT+AGG - Chr2:24306482-24306501 None:intergenic 30.0%
TGTCAAGAAATTACTCTACT+AGG - Chr2:24307640-24307659 None:intergenic 30.0%
TTAAATCAAGCAACCTATTG+AGG - Chr2:24307225-24307244 None:intergenic 30.0%
TTAGACACAATAAGGTGATA+GGG - Chr2:24311174-24311193 None:intergenic 30.0%
TTATCAAGAAACAACTTCTC+AGG - Chr2:24306778-24306797 None:intergenic 30.0%
TTCTCCCTCAAATTAGTTAA+AGG + Chr2:24305694-24305713 MsG0280008014.01.T01:intron 30.0%
! AACAATTTTGCTAAGAGACA+AGG - Chr2:24308879-24308898 None:intergenic 30.0%
! AAGTTGACACCTTTAAGAAA+TGG + Chr2:24306493-24306512 MsG0280008014.01.T01:CDS 30.0%
! AAGTTGACGTCTTTAAGAAA+TGG + Chr2:24311393-24311412 MsG0280008014.01.T01:CDS 30.0%
! AATGTTTAAACTGGTTCTCT+TGG - Chr2:24308945-24308964 None:intergenic 30.0%
! ACCATCTATATTTGGTTCAA+AGG + Chr2:24311257-24311276 MsG0280008014.01.T01:intron 30.0%
! AGCATTGAAAATGTAATGCA+TGG + Chr2:24309081-24309100 MsG0280008014.01.T01:intron 30.0%
! AGTTGACACCTTTAAGAAAT+GGG + Chr2:24306494-24306513 MsG0280008014.01.T01:CDS 30.0%
! AGTTGACGTCTTTAAGAAAT+GGG + Chr2:24311394-24311413 MsG0280008014.01.T01:CDS 30.0%
! ATCAAGTTGTTGATCAAGAA+TGG + Chr2:24306288-24306307 MsG0280008014.01.T01:CDS 30.0%
! ATCTAGTTTATAGTCTGTGT+TGG + Chr2:24308223-24308242 MsG0280008014.01.T01:intron 30.0%
! CTCAAATTCTTTAGAAACCA+TGG + Chr2:24305973-24305992 MsG0280008014.01.T01:CDS 30.0%
! CTTCAACATTGAATTTTGAG+AGG - Chr2:24307354-24307373 None:intergenic 30.0%
! GACCTCTAAATCTTTTCTAA+TGG - Chr2:24305257-24305276 None:intergenic 30.0%
! TTAGTTTCGAAGCATTTAGA+AGG + Chr2:24306532-24306551 MsG0280008014.01.T01:CDS 30.0%
! TTTTCTAATGGTTTCTCGAA+TGG - Chr2:24305245-24305264 None:intergenic 30.0%
! TTTTTCCCAGAAAGTTGTTA+TGG + Chr2:24310610-24310629 MsG0280008014.01.T01:intron 30.0%
!! AAAACCATGGTTTTTGAAGA+AGG - Chr2:24310881-24310900 None:intergenic 30.0%
!! AAAATGGTAATGGGGTTATT+GGG - Chr2:24305803-24305822 None:intergenic 30.0%
!! AGATGGAAAGATGTTTTTGA+AGG - Chr2:24306426-24306445 None:intergenic 30.0%
!! AGGAAACAAGTTTTATACAC+TGG - Chr2:24306989-24307008 None:intergenic 30.0%
!! AGTTTGTTTTCAGATTAAGG+AGG + Chr2:24311694-24311713 MsG0280008014.01.T01:intron 30.0%
!! ATCAATTTGACGACTGATTT+TGG + Chr2:24311195-24311214 MsG0280008014.01.T01:intron 30.0%
!! GCAAGTTTGTTTTCAGATTA+AGG + Chr2:24311691-24311710 MsG0280008014.01.T01:intron 30.0%
!! TTTTGTTGTATTTGGAACTG+CGG - Chr2:24308690-24308709 None:intergenic 30.0%
!!! GAATTTTTGGGTTAATGAGT+TGG + Chr2:24306602-24306621 MsG0280008014.01.T01:CDS 30.0%
!!! GGTTTTGTTTATACTTGCTT+TGG - Chr2:24306460-24306479 None:intergenic 30.0%
!!! TACTTTTGGAATTGCTTTGA+TGG + Chr2:24311334-24311353 MsG0280008014.01.T01:CDS 30.0%
AAAGTGGTAAACAGAATAGG+AGG - Chr2:24307745-24307764 None:intergenic 35.0%
AACTCATTGGAGGAAGTTAA+GGG + Chr2:24311287-24311306 MsG0280008014.01.T01:CDS 35.0%
AACTTCTCAGGCACTATAAA+TGG - Chr2:24306766-24306785 None:intergenic 35.0%
AAGAAGAGTAGATCAAATGG+AGG + Chr2:24305180-24305199 MsG0280008014.01.T01:CDS 35.0%
AAGAAGGTGATAACTGAATC+AGG - Chr2:24310865-24310884 None:intergenic 35.0%
AAGAATTTGAGAACAGAGTC+AGG - Chr2:24305964-24305983 None:intergenic 35.0%
AAGCTACTTCGTAAAATTCG+AGG - Chr2:24311046-24311065 None:intergenic 35.0%
AAGTTATATAGACGGCAAAG+AGG - Chr2:24308190-24308209 None:intergenic 35.0%
AATGCACTCCATATCGAATT+AGG - Chr2:24311141-24311160 None:intergenic 35.0%
AATGGTACCAACCTATGAAT+TGG + Chr2:24306176-24306195 MsG0280008014.01.T01:CDS 35.0%
AGAAATTGGTTGTCAACTTC+TGG + Chr2:24308485-24308504 MsG0280008014.01.T01:intron 35.0%
AGAAGCTTCTGAGTGAAATT+GGG - Chr2:24310699-24310718 None:intergenic 35.0%
AGATTTAGAGGTCAATGAGT+TGG + Chr2:24305264-24305283 MsG0280008014.01.T01:intron 35.0%
AGCTACTTCGTAAAATTCGA+GGG - Chr2:24311045-24311064 None:intergenic 35.0%
AGGAGTCCGATATTATATTC+AGG + Chr2:24306348-24306367 MsG0280008014.01.T01:CDS 35.0%
AGGATTGATTAACTCATTGG+AGG + Chr2:24311277-24311296 MsG0280008014.01.T01:intron 35.0%
AGTTATATAGACGGCAAAGA+GGG - Chr2:24308189-24308208 None:intergenic 35.0%
ATAACTGAATCAGGCTTATC+TGG - Chr2:24310856-24310875 None:intergenic 35.0%
ATACATTCTTGAAATCTCCC+CGG + Chr2:24306202-24306221 MsG0280008014.01.T01:CDS 35.0%
ATAGTGTTAACTCACTCTCT+CGG - Chr2:24305614-24305633 None:intergenic 35.0%
ATATGATAGCAAAGGAACCA+CGG + Chr2:24306019-24306038 MsG0280008014.01.T01:CDS 35.0%
ATCACCTTCTTCAAAAACCA+TGG + Chr2:24310874-24310893 MsG0280008014.01.T01:intron 35.0%
ATGGATACTAACATACACTC+AGG - Chr2:24306561-24306580 None:intergenic 35.0%
ATTAAGTGAGATGTAAGACC+TGG - Chr2:24307439-24307458 None:intergenic 35.0%
ATTCGATGAGAAGTTTGAAG+TGG - Chr2:24310500-24310519 None:intergenic 35.0%
ATTTGATTCAAAGTAACGCG+AGG + Chr2:24310428-24310447 MsG0280008014.01.T01:intron 35.0%
CCTGGACCTGAATATAATAT+CGG - Chr2:24306357-24306376 None:intergenic 35.0%
CTATGTATGAAACGGTTTCT+TGG + Chr2:24307879-24307898 MsG0280008014.01.T01:intron 35.0%
CTTTATCACCATTCTTGCAT+TGG + Chr2:24308575-24308594 MsG0280008014.01.T01:intron 35.0%
GAAAAAAAGGACCATTCCAA+GGG + Chr2:24306678-24306697 MsG0280008014.01.T01:CDS 35.0%
GAAAATAGGCTTAGATGGTT+TGG + Chr2:24305124-24305143 MsG0280008014.01.T01:CDS 35.0%
GAAATTGCTGGAGGAATTAA+AGG + Chr2:24306386-24306405 MsG0280008014.01.T01:CDS 35.0%
GAATGTATACGCCAATTCAT+AGG - Chr2:24306190-24306209 None:intergenic 35.0%
GACAAGGTTAATTATGTCAG+AGG - Chr2:24306115-24306134 None:intergenic 35.0%
GCATACACAATGGAAAACAA+TGG + Chr2:24311760-24311779 MsG0280008014.01.T01:intron 35.0%
GCATGCCATTCATTAATTAG+CGG + Chr2:24311782-24311801 MsG0280008014.01.T01:intron 35.0%
GCTTTCTTACTCATAATCTC+CGG + Chr2:24307921-24307940 MsG0280008014.01.T01:intron 35.0%
GTATTACTGGCAAATTGAGA+AGG - Chr2:24307085-24307104 None:intergenic 35.0%
GTGCAAAAATGCAGAGAAAA+TGG - Chr2:24305819-24305838 None:intergenic 35.0%
GTTCACATCATAGATTCTAC+TGG + Chr2:24310196-24310215 MsG0280008014.01.T01:intron 35.0%
TAAAGAAAGGTCTGCGAAAT+AGG + Chr2:24306722-24306741 MsG0280008014.01.T01:intron 35.0%
TAACTCATTGGAGGAAGTTA+AGG + Chr2:24311286-24311305 MsG0280008014.01.T01:CDS 35.0%
TAACTGAATCAGGCTTATCT+GGG - Chr2:24310855-24310874 None:intergenic 35.0%
TAGGTTCTTGAAAACCAACA+AGG + Chr2:24311102-24311121 MsG0280008014.01.T01:intron 35.0%
TCTTCTTAAAACGGCATCTA+CGG - Chr2:24305167-24305186 None:intergenic 35.0%
TGATTCAGATTCAGATGTTG+TGG - Chr2:24310725-24310744 None:intergenic 35.0%
TGGTAGAAAATAGGCTTAGA+TGG + Chr2:24305119-24305138 MsG0280008014.01.T01:CDS 35.0%
TTAGCAGGAATTGCACAATT+GGG - Chr2:24306705-24306724 None:intergenic 35.0%
TTGATCGATCAGAAAGGATA+TGG + Chr2:24307829-24307848 MsG0280008014.01.T01:intron 35.0%
TTGGTACCATTTGATTGTTG+AGG - Chr2:24306167-24306186 None:intergenic 35.0%
TTTAGCAGGAATTGCACAAT+TGG - Chr2:24306706-24306725 None:intergenic 35.0%
TTTGATTCAAAGTAACGCGA+GGG + Chr2:24310429-24310448 MsG0280008014.01.T01:intron 35.0%
TTTGTTCCCTGGTATATTTG+TGG + Chr2:24307565-24307584 MsG0280008014.01.T01:intron 35.0%
! AAAAGTGATTTGTATTCCGG+AGG - Chr2:24309460-24309479 None:intergenic 35.0%
! AAACCGGGTTGTGAATTTTA+GGG - Chr2:24310658-24310677 None:intergenic 35.0%
! AAAGACTTGATAGCTGATTC+AGG - Chr2:24310805-24310824 None:intergenic 35.0%
! AAGCTTTTGATCGATCAGAA+AGG + Chr2:24307823-24307842 MsG0280008014.01.T01:intron 35.0%
! ATGCAGAGAAAATGGTAATG+GGG - Chr2:24305811-24305830 None:intergenic 35.0%
! ATTTTTGACCACTCTTCTAC+TGG - Chr2:24308723-24308742 None:intergenic 35.0%
! CATCCTTCAACAACTACTTT+TGG + Chr2:24311320-24311339 MsG0280008014.01.T01:CDS 35.0%
! CTAATCATTTTGAACGAGAG+GGG - Chr2:24309329-24309348 None:intergenic 35.0%
! CTGGAGGAATTAAAGGTTTT+GGG + Chr2:24306393-24306412 MsG0280008014.01.T01:CDS 35.0%
! GCTAATCATTTTGAACGAGA+GGG - Chr2:24309330-24309349 None:intergenic 35.0%
! GGTTAATAATGTTTTGCCTC+CGG + Chr2:24309441-24309460 MsG0280008014.01.T01:intron 35.0%
! GTAATAACATTTTGTGGGGT+GGG - Chr2:24310956-24310975 None:intergenic 35.0%
! GTTGACACCTTTAAGAAATG+GGG + Chr2:24306495-24306514 MsG0280008014.01.T01:CDS 35.0%
! GTTGACGTCTTTAAGAAATG+GGG + Chr2:24311395-24311414 MsG0280008014.01.T01:CDS 35.0%
! GTTTCTCGAATGGTTTTCTT+AGG - Chr2:24305235-24305254 None:intergenic 35.0%
! TGATTGTTTATGTCTGGAAC+TGG + Chr2:24305525-24305544 MsG0280008014.01.T01:intron 35.0%
! TGCTAATCATTTTGAACGAG+AGG - Chr2:24309331-24309350 None:intergenic 35.0%
! TTGAAACAGAGCTTTGTAAG+TGG - Chr2:24305928-24305947 None:intergenic 35.0%
! TTGTAGTTGTAGCCTTAATC+TGG + Chr2:24308641-24308660 MsG0280008014.01.T01:intron 35.0%
! TTTTGAGCTATTTGCAGGTT+CGG + Chr2:24308375-24308394 MsG0280008014.01.T01:intron 35.0%
! TTTTGTCTATGGTGTATGCA+AGG - Chr2:24306864-24306883 None:intergenic 35.0%
! TTTTGTTACATTGGTAGGCA+TGG + Chr2:24307120-24307139 MsG0280008014.01.T01:intron 35.0%
!! AAACTTTGGGAGAATCCTTT+TGG - Chr2:24306064-24306083 None:intergenic 35.0%
!! AAAGTGATGGATGTATAGCA+AGG - Chr2:24306644-24306663 None:intergenic 35.0%
!! AAGTGATGGATGTATAGCAA+GGG - Chr2:24306643-24306662 None:intergenic 35.0%
!! CTGATTTTTGAGCTATTTGC+AGG + Chr2:24308370-24308389 MsG0280008014.01.T01:CDS 35.0%
!! GAAAATGGTAATGGGGTTAT+TGG - Chr2:24305804-24305823 None:intergenic 35.0%
!! TCATCATCAAAAAAGCACCT+TGG + Chr2:24310920-24310939 MsG0280008014.01.T01:intron 35.0%
!! TGAGAAGGTATTATGAAGAC+TGG - Chr2:24307070-24307089 None:intergenic 35.0%
!! TTTTGGGTCAATCAATTGGT+TGG + Chr2:24311506-24311525 MsG0280008014.01.T01:CDS 35.0%
!!! GAGTTTTTGGGTCAATCAAT+TGG + Chr2:24311502-24311521 MsG0280008014.01.T01:CDS 35.0%
!!! GTTTTAGAGAGTGATGTGAT+TGG - Chr2:24310563-24310582 None:intergenic 35.0%
AAACGGTTTCTTGGTCTAGA+TGG + Chr2:24307888-24307907 MsG0280008014.01.T01:intron 40.0%
AACTCAACCTTGCATACAAC+TGG + Chr2:24312118-24312137 MsG0280008014.01.T01:three_prime_UTR 40.0%
AACTGAATCAGGCTTATCTG+GGG - Chr2:24310854-24310873 None:intergenic 40.0%
AATTGCACAAAAGCTGCTCT+TGG - Chr2:24311963-24311982 None:intergenic 40.0%
ACACCCTAAAATTCACAACC+CGG + Chr2:24310652-24310671 MsG0280008014.01.T01:intron 40.0%
ACTACGCGATATGATAGCAA+AGG + Chr2:24306011-24306030 MsG0280008014.01.T01:CDS 40.0%
AGACCAACCCCATTTCTTAA+AGG - Chr2:24306505-24306524 None:intergenic 40.0%
AGAGGTTGAATCTGAAGAGT+TGG - Chr2:24305841-24305860 None:intergenic 40.0%
AGGAATGACACCATTAGAGA+GGG + Chr2:24305067-24305086 MsG0280008014.01.T01:CDS 40.0%
AGTCAGGTTAAAAGAGGTAG+AGG + Chr2:24305205-24305224 MsG0280008014.01.T01:CDS 40.0%
ATCTTCAACATGGCTTCGAA+AGG - Chr2:24310585-24310604 None:intergenic 40.0%
ATGTGAGTACATTTGTTCCC+TGG + Chr2:24307554-24307573 MsG0280008014.01.T01:intron 40.0%
ATTGTGAACTGCACAAGCAA+GGG - Chr2:24306232-24306251 None:intergenic 40.0%
CAAGTCTTTCAACTACAAGC+AGG + Chr2:24310816-24310835 MsG0280008014.01.T01:intron 40.0%
CAGAAGCTTCTGAGTGAAAT+TGG - Chr2:24310700-24310719 None:intergenic 40.0%
CAGTGAGTCATATAACCTAG+GGG - Chr2:24309545-24309564 None:intergenic 40.0%
CCAGTGAGTCATATAACCTA+GGG - Chr2:24309546-24309565 None:intergenic 40.0%
CCGATATTATATTCAGGTCC+AGG + Chr2:24306354-24306373 MsG0280008014.01.T01:CDS 40.0%
CGCGAGAGAAGTTATATAGA+CGG - Chr2:24308198-24308217 None:intergenic 40.0%
CTACTAGGTTATAAGGGTCT+AGG - Chr2:24307625-24307644 None:intergenic 40.0%
CTTCTTAAAACGGCATCTAC+GGG - Chr2:24305166-24305185 None:intergenic 40.0%
CTTTGGCAATTAGTGCTAGA+TGG - Chr2:24306443-24306462 None:intergenic 40.0%
GACAAGGTGAATGTTACTGT+AGG - Chr2:24308863-24308882 None:intergenic 40.0%
GACTCACTGGATTTATGATG+TGG + Chr2:24309556-24309575 MsG0280008014.01.T01:intron 40.0%
GCAAACAATGACATCCTTGT+TGG - Chr2:24311119-24311138 None:intergenic 40.0%
GGAAAAAAAGGACCATTCCA+AGG + Chr2:24306677-24306696 MsG0280008014.01.T01:CDS 40.0%
GGAGTTTGGAAGCAAATTGT+GGG - Chr2:24305902-24305921 None:intergenic 40.0%
GTATACGCCAATTCATAGGT+TGG - Chr2:24306186-24306205 None:intergenic 40.0%
GTCTAAGTTTCAGCAAGAAC+AGG - Chr2:24308084-24308103 None:intergenic 40.0%
GTGCAATTCCTGCTAAAGAA+AGG + Chr2:24306709-24306728 MsG0280008014.01.T01:CDS 40.0%
GTTGGGAATCAAAGAAACCA+TGG - Chr2:24305993-24306012 None:intergenic 40.0%
TACATTCTTGAAATCTCCCC+GGG + Chr2:24306203-24306222 MsG0280008014.01.T01:CDS 40.0%
TAGCAGGAATTGCACAATTG+GGG - Chr2:24306704-24306723 None:intergenic 40.0%
TAGCTGTATATGCCATAGTC+CGG + Chr2:24307413-24307432 MsG0280008014.01.T01:intron 40.0%
TAGGAATGACACCATTAGAG+AGG + Chr2:24305066-24305085 MsG0280008014.01.T01:CDS 40.0%
TCAATGAACTCGGATGAATG+CGG - Chr2:24309137-24309156 None:intergenic 40.0%
TCCAAACAACGTCGTTTCAA+AGG + Chr2:24311931-24311950 MsG0280008014.01.T01:intron 40.0%
TCCAGTGAGTCATATAACCT+AGG - Chr2:24309547-24309566 None:intergenic 40.0%
TGCAAGCCTCAACAATCAAA+TGG + Chr2:24306158-24306177 MsG0280008014.01.T01:CDS 40.0%
TGCTATCATATCGCGTAGTT+GGG - Chr2:24306010-24306029 None:intergenic 40.0%
TGGAGGAAGTTAAGGGTTTA+GGG + Chr2:24311294-24311313 MsG0280008014.01.T01:CDS 40.0%
TGTTGTAACCAGTAGAAGAG+TGG + Chr2:24308712-24308731 MsG0280008014.01.T01:intron 40.0%
TGTTGTCGTGTGAAAAACCA+TGG - Chr2:24310894-24310913 None:intergenic 40.0%
TTAAGGGCTTGAGATTGAGA+AGG - Chr2:24305767-24305786 None:intergenic 40.0%
TTAGAAGATTGCTTCGTAGC+AGG + Chr2:24306328-24306347 MsG0280008014.01.T01:CDS 40.0%
TTGCTATCATATCGCGTAGT+TGG - Chr2:24306011-24306030 None:intergenic 40.0%
TTGGAGGAAGTTAAGGGTTT+AGG + Chr2:24311293-24311312 MsG0280008014.01.T01:CDS 40.0%
TTTCGAAGCCATGTTGAAGA+TGG + Chr2:24310584-24310603 MsG0280008014.01.T01:intron 40.0%
! AAATTGGGAACGAGAAGTGT+TGG - Chr2:24310684-24310703 None:intergenic 40.0%
! ACACCTTTAAGAAATGGGGT+TGG + Chr2:24306499-24306518 MsG0280008014.01.T01:CDS 40.0%
! ACGTCTTTAAGAAATGGGGT+TGG + Chr2:24311399-24311418 MsG0280008014.01.T01:CDS 40.0%
! ATTGCTTTGATGGCCAAGAA+AGG + Chr2:24311344-24311363 MsG0280008014.01.T01:CDS 40.0%
! CAAACCGGGTTGTGAATTTT+AGG - Chr2:24310659-24310678 None:intergenic 40.0%
! CACGCCATGATCATATTTTC+AGG + Chr2:24306888-24306907 MsG0280008014.01.T01:intron 40.0%
! CATACCTCATCCACACTTTT+GGG + Chr2:24305871-24305890 MsG0280008014.01.T01:CDS 40.0%
! CTTGGTGGTTGTTGTTGTAA+GGG + Chr2:24305361-24305380 MsG0280008014.01.T01:intron 40.0%
! GAGAACAGAGTCAGGTTTTT+GGG - Chr2:24305956-24305975 None:intergenic 40.0%
! GCTGGAGGAATTAAAGGTTT+TGG + Chr2:24306392-24306411 MsG0280008014.01.T01:CDS 40.0%
! GGTAATAACATTTTGTGGGG+TGG - Chr2:24310957-24310976 None:intergenic 40.0%
! GTTTCGAAGCATTTAGAAGG+CGG + Chr2:24306535-24306554 MsG0280008014.01.T01:CDS 40.0%
! GTTTTGTCCAGTTGTATGCA+AGG - Chr2:24312128-24312147 None:intergenic 40.0%
! TCATACCTCATCCACACTTT+TGG + Chr2:24305870-24305889 MsG0280008014.01.T01:CDS 40.0%
! TGAGAACAGAGTCAGGTTTT+TGG - Chr2:24305957-24305976 None:intergenic 40.0%
! TTATAAGGGTCTAGGACAAG+AGG - Chr2:24307617-24307636 None:intergenic 40.0%
! TTGGGTTAATGAGTTGGGTT+GGG + Chr2:24306608-24306627 MsG0280008014.01.T01:CDS 40.0%
! TTTGGGAGAATCCTTTTGGA+GGG - Chr2:24306060-24306079 None:intergenic 40.0%
! TTTGGGATGTTCGATCTTCA+CGG - Chr2:24305584-24305603 None:intergenic 40.0%
! TTTGGGTTAATGAGTTGGGT+TGG + Chr2:24306607-24306626 MsG0280008014.01.T01:CDS 40.0%
!! ATCTTCACGGCGTTGATTTA+AGG - Chr2:24305571-24305590 None:intergenic 40.0%
!! CTGAAAGACAGTCTTGTTAC+AGG + Chr2:24308828-24308847 MsG0280008014.01.T01:intron 40.0%
!! GAAGCTTTGAGTGCGAATTT+AGG - Chr2:24311913-24311932 None:intergenic 40.0%
!! GGGTTTGGTGAGAAAGTTAA+GGG - Chr2:24305783-24305802 None:intergenic 40.0%
!! GGTAATGGACTAACAAGCTA+AGG - Chr2:24311836-24311855 None:intergenic 40.0%
!! TCCTTTGAAACGACGTTGTT+TGG - Chr2:24311935-24311954 None:intergenic 40.0%
!! TGGGTTTGGTGAGAAAGTTA+AGG - Chr2:24305784-24305803 None:intergenic 40.0%
AACAACCTGGCAAATGCAGT+TGG - Chr2:24308423-24308442 None:intergenic 45.0%
AACTCGGATGAATGCGGTTA+AGG - Chr2:24309131-24309150 None:intergenic 45.0%
AATTGCATAACTGAGGCCCT+CGG - Chr2:24311595-24311614 None:intergenic 45.0%
AGACATGCTGAAATTGCTGG+AGG + Chr2:24306377-24306396 MsG0280008014.01.T01:CDS 45.0%
AGATCAAATGGAGGAGAGTC+AGG + Chr2:24305189-24305208 MsG0280008014.01.T01:CDS 45.0%
AGCAATTTCAGCATGTCTCC+TGG - Chr2:24306375-24306394 None:intergenic 45.0%
AGGAGACATGCTGAAATTGC+TGG + Chr2:24306374-24306393 MsG0280008014.01.T01:CDS 45.0%
AGGCAGCAGCTTGTAGAAAT+TGG + Chr2:24308471-24308490 MsG0280008014.01.T01:intron 45.0%
AGTGAATGAGTGTGAAGTGG+TGG - Chr2:24311857-24311876 None:intergenic 45.0%
ATGAGATACGATGCAGCGAA+TGG - Chr2:24310763-24310782 None:intergenic 45.0%
CACAGTGAATGAGTGTGAAG+TGG - Chr2:24311860-24311879 None:intergenic 45.0%
CCCTAGGTTATATGACTCAC+TGG + Chr2:24309543-24309562 MsG0280008014.01.T01:intron 45.0%
CGGAGTTTGGAAGCAAATTG+TGG - Chr2:24305903-24305922 None:intergenic 45.0%
CTACTGGTCAAAGAGCTTAG+AGG + Chr2:24310212-24310231 MsG0280008014.01.T01:intron 45.0%
CTCGCAATCTCACTTTGACT+TGG + Chr2:24308022-24308041 MsG0280008014.01.T01:intron 45.0%
CTGTAGGGTTCTTACTGACA+AGG - Chr2:24306131-24306150 None:intergenic 45.0%
GAGGAGAGTCAGGTTAAAAG+AGG + Chr2:24305199-24305218 MsG0280008014.01.T01:CDS 45.0%
GAGGTATGAGACAGGAAAAG+AGG - Chr2:24305859-24305878 None:intergenic 45.0%
GATTGTGAACTGCACAAGCA+AGG - Chr2:24306233-24306252 None:intergenic 45.0%
GGAGAAAAGGATCATTCCGA+GGG + Chr2:24311576-24311595 MsG0280008014.01.T01:intron 45.0%
GGTGAATGTTACTGTAGGAG+AGG - Chr2:24308858-24308877 None:intergenic 45.0%
TCAAGCACACAGCCAGATTA+AGG - Chr2:24308656-24308675 None:intergenic 45.0%
TGAGTGTGAAGTGGTGGTAA+TGG - Chr2:24311851-24311870 None:intergenic 45.0%
TGGAGAAAAGGATCATTCCG+AGG + Chr2:24311575-24311594 MsG0280008014.01.T01:intron 45.0%
TGTTACCAACTGCATTTGCC+AGG + Chr2:24308415-24308434 MsG0280008014.01.T01:intron 45.0%
TTCGCAGACCTTTCTTTAGC+AGG - Chr2:24306720-24306739 None:intergenic 45.0%
TTTGTAAGTGGAGCGGAGTT+TGG - Chr2:24305916-24305935 None:intergenic 45.0%
! AAGCCTTATCCCACTAAGTG+GGG - Chr2:24305344-24305363 None:intergenic 45.0%
! ACAGAGCTTTGTAAGTGGAG+CGG - Chr2:24305923-24305942 None:intergenic 45.0%
! AGTTGGCTCCAATGCAAGAA+TGG - Chr2:24308586-24308605 None:intergenic 45.0%
! CAAACCCAAAAGTGTGGATG+AGG - Chr2:24305878-24305897 None:intergenic 45.0%
! CAAGCCTTATCCCACTAAGT+GGG - Chr2:24305345-24305364 None:intergenic 45.0%
! GCTTGGTGGTTGTTGTTGTA+AGG + Chr2:24305360-24305379 MsG0280008014.01.T01:intron 45.0%
! TGTCTGGAACTGGAACACTA+TGG + Chr2:24305535-24305554 MsG0280008014.01.T01:intron 45.0%
! TTGAACGAGAGGGGTCTTTT+TGG - Chr2:24309320-24309339 None:intergenic 45.0%
!! AGGCTTGCAGAAAGTACTGT+AGG - Chr2:24306147-24306166 None:intergenic 45.0%
!! CGAGAAGTGTTGGTTCAAAC+CGG - Chr2:24310674-24310693 None:intergenic 45.0%
!! CTTTGGGAGAATCCTTTTGG+AGG - Chr2:24306061-24306080 None:intergenic 45.0%
!! GAGAAGTGTTGGTTCAAACC+GGG - Chr2:24310673-24310692 None:intergenic 45.0%
!! GGCTTGCAGAAAGTACTGTA+GGG - Chr2:24306146-24306165 None:intergenic 45.0%
!! GGTAATGGGGTTATTGGGTT+TGG - Chr2:24305798-24305817 None:intergenic 45.0%
!! TGGCGTGCAAGTTTTGTCTA+TGG - Chr2:24306875-24306894 None:intergenic 45.0%
!! TTGGGAGAATCCTTTTGGAG+GGG - Chr2:24306059-24306078 None:intergenic 45.0%
!! ATTAAATTTAAAAAAAAATC+TGG - Chr2:24309975-24309994 None:intergenic 5.0%
!!! CATAAATTAATTTTTTTAAA+AGG - Chr2:24309212-24309231 None:intergenic 5.0%
!!! CTTTTAAATAATTAAATATA+GGG + Chr2:24309420-24309439 MsG0280008014.01.T01:intron 5.0%
!!! TCTTTTAAATAATTAAATAT+AGG + Chr2:24309419-24309438 MsG0280008014.01.T01:intron 5.0%
AATTGCACAATTGGGGCCCT+TGG - Chr2:24306697-24306716 None:intergenic 50.0%
ACACCATTAGAGAGGGAGTG+GGG + Chr2:24305074-24305093 MsG0280008014.01.T01:CDS 50.0%
AGTGAGATGTAAGACCTGGC+CGG - Chr2:24307435-24307454 None:intergenic 50.0%
CCACTTAGTGGGATAAGGCT+TGG + Chr2:24305343-24305362 MsG0280008014.01.T01:intron 50.0%
CTTAGTGGGATAAGGCTTGG+TGG + Chr2:24305346-24305365 MsG0280008014.01.T01:intron 50.0%
CTTATCCCACTAAGTGGGGT+CGG - Chr2:24305340-24305359 None:intergenic 50.0%
GACACCATTAGAGAGGGAGT+GGG + Chr2:24305073-24305092 MsG0280008014.01.T01:CDS 50.0%
GGGTGGGAAGAAAGTAACCA+AGG - Chr2:24310940-24310959 None:intergenic 50.0%
GTGGGTCAAACCCAAAAGTG+TGG - Chr2:24305884-24305903 None:intergenic 50.0%
GTGTGGATGAGGTATGAGAC+AGG - Chr2:24305867-24305886 None:intergenic 50.0%
GTGTTAACTCACTCTCTCGG+TGG - Chr2:24305611-24305630 None:intergenic 50.0%
TAACTCACTCTCTCGGTGGT+GGG - Chr2:24305607-24305626 None:intergenic 50.0%
TCTACAAGCTGCTGCCTGAA+GGG - Chr2:24308468-24308487 None:intergenic 50.0%
TGACACCATTAGAGAGGGAG+TGG + Chr2:24305072-24305091 MsG0280008014.01.T01:CDS 50.0%
TTAACTCACTCTCTCGGTGG+TGG - Chr2:24305608-24305627 None:intergenic 50.0%
TTCTACAAGCTGCTGCCTGA+AGG - Chr2:24308469-24308488 None:intergenic 50.0%
TTTCCTACGACCCCTCCAAA+AGG + Chr2:24306046-24306065 MsG0280008014.01.T01:CDS 50.0%
! AGTGAGTGCTGTGTCGTAAG+AGG - Chr2:24310538-24310557 None:intergenic 50.0%
! CCAAGCCTTATCCCACTAAG+TGG - Chr2:24305346-24305365 None:intergenic 50.0%
! CGAGGGTGTGCAGTTAACAA+TGG - Chr2:24311028-24311047 None:intergenic 50.0%
!! AATCCTTTTGGAGGGGTCGT+AGG - Chr2:24306052-24306071 None:intergenic 50.0%
!! GTCAGAGGTAGAAGCACCTT+TGG - Chr2:24306100-24306119 None:intergenic 50.0%
!!! TCACTGCCACTTTTCCCTTC+AGG + Chr2:24308451-24308470 MsG0280008014.01.T01:intron 50.0%
ACTAAGTGGGGTCGGCTACA+TGG - Chr2:24305332-24305351 None:intergenic 55.0%
ATGTAGCCGACCCCACTTAG+TGG + Chr2:24305331-24305350 MsG0280008014.01.T01:intron 55.0%
CACAATTGGGGCCCTTGGAA+TGG - Chr2:24306692-24306711 None:intergenic 55.0%
CACCATTAGAGAGGGAGTGG+GGG + Chr2:24305075-24305094 MsG0280008014.01.T01:CDS 55.0%
CGACCCCACTTAGTGGGATA+AGG + Chr2:24305338-24305357 MsG0280008014.01.T01:intron 55.0%
CTGCTGCCTGAAGGGAAAAG+TGG - Chr2:24308460-24308479 None:intergenic 55.0%
GTATATGCCATAGTCCGGCC+AGG + Chr2:24307418-24307437 MsG0280008014.01.T01:intron 55.0%
TACCCCCACTCCCTCTCTAA+TGG - Chr2:24305080-24305099 None:intergenic 55.0%
TGTAAGACCTGGCCGGACTA+TGG - Chr2:24307428-24307447 None:intergenic 55.0%
TGTAGCCGACCCCACTTAGT+GGG + Chr2:24305332-24305351 MsG0280008014.01.T01:intron 55.0%
!! ACTCTCTCGGTGGTGGGTTT+GGG - Chr2:24305601-24305620 None:intergenic 55.0%
CAAAGTAACGCGAGGGCTCC+CGG + Chr2:24310436-24310455 MsG0280008014.01.T01:intron 60.0%
GGGTCGTAGGAAAGCAACCG+TGG - Chr2:24306039-24306058 None:intergenic 60.0%
!! CACTCTCTCGGTGGTGGGTT+TGG - Chr2:24305602-24305621 None:intergenic 60.0%
!! CTGCACAAGCAAGGGTGTCC+CGG - Chr2:24306224-24306243 None:intergenic 60.0%
!! TGCACAAGCAAGGGTGTCCC+GGG - Chr2:24306223-24306242 None:intergenic 60.0%
!! GCACAAGCAAGGGTGTCCCG+GGG - Chr2:24306222-24306241 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
Chr2 gene 24305025 24312164 24305025 ID=MsG0280008014.01;Name=MsG0280008014.01
Chr2 mRNA 24305025 24312164 24305025 ID=MsG0280008014.01.T01;Parent=MsG0280008014.01;Name=MsG0280008014.01.T01;_AED=0.56;_eAED=0.61;_QI=0|0|0|0.6|0|0|5|117|494
Chr2 exon 24305025 24305273 24305025 ID=MsG0280008014.01.T01:exon:40613;Parent=MsG0280008014.01.T01
Chr2 exon 24305850 24306730 24305850 ID=MsG0280008014.01.T01:exon:40614;Parent=MsG0280008014.01.T01
Chr2 exon 24308312 24308391 24308312 ID=MsG0280008014.01.T01:exon:40615;Parent=MsG0280008014.01.T01
Chr2 exon 24311279 24311551 24311279 ID=MsG0280008014.01.T01:exon:40616;Parent=MsG0280008014.01.T01
Chr2 exon 24312046 24312164 24312046 ID=MsG0280008014.01.T01:exon:40617;Parent=MsG0280008014.01.T01
Chr2 CDS 24305025 24305273 24305025 ID=MsG0280008014.01.T01:cds;Parent=MsG0280008014.01.T01
Chr2 CDS 24305850 24306730 24305850 ID=MsG0280008014.01.T01:cds;Parent=MsG0280008014.01.T01
Chr2 CDS 24308312 24308391 24308312 ID=MsG0280008014.01.T01:cds;Parent=MsG0280008014.01.T01
Chr2 CDS 24311279 24311551 24311279 ID=MsG0280008014.01.T01:cds;Parent=MsG0280008014.01.T01
Chr2 CDS 24312046 24312047 24312046 ID=MsG0280008014.01.T01:cds;Parent=MsG0280008014.01.T01
Chr2 three_prime_UTR 24312048 24312164 24312048 ID=MsG0280008014.01.T01:three_prime_utr;Parent=MsG0280008014.01.T01
Gene Sequence

>MsG0280008014.01.T01

ATGTTGCGATGGATGAGTGGTAAAACTAGACATAATAGGATTAGGAATGACACCATTAGAGAGGGAGTGGGGGTAGCACCTATAATAGAAAAGTTGGTAGAAAATAGGCTTAGATGGTTTGGACATGTAGAGAGAAGACCCGTAGATGCCGTTTTAAGAAGAGTAGATCAAATGGAGGAGAGTCAGGTTAAAAGAGGTAGAGGAAGACCTAAGAAAACCATTCGAGAAACCATTAGAAAAGATTTAGAGATTCAACCTCTTTTCCTGTCTCATACCTCATCCACACTTTTGGGTTTGACCCACAATTTGCTTCCAAACTCCGCTCCACTTACAAAGCTCTGTTTCAAGAATGCCCAAAAACCTGACTCTGTTCTCAAATTCTTTAGAAACCATGGTTTCTTTGATTCCCAACTACGCGATATGATAGCAAAGGAACCACGGTTGCTTTCCTACGACCCCTCCAAAAGGATTCTCCCAAAGTTTCAATTTTTTTTCTCCAAAGGTGCTTCTACCTCTGACATAATTAACCTTGTCAGTAAGAACCCTACAGTACTTTCTGCAAGCCTCAACAATCAAATGGTACCAACCTATGAATTGGCGTATACATTCTTGAAATCTCCCCGGGACACCCTTGCTTGTGCAGTTCACAATCGAAATTTCTTTGGAGCTACGCGTGTGCCAAATAACATCAAGTTGTTGATCAAGAATGGAGTGTCCGACTCAAACATTAGAAGATTGCTTCGTAGCAGGAGTCCGATATTATATTCAGGTCCAGGAGACATGCTGAAATTGCTGGAGGAATTAAAGGTTTTGGGTTTTAATCCTTCAAAAACATCTTTCCATCTAGCACTAATTGCCAAAGCAAGTATAAACAAAACCCTATGGAAAGATAAAGTTGACACCTTTAAGAAATGGGGTTGGTCTGAACAAGTTAGTTTCGAAGCATTTAGAAGGCGGCCTGAGTGTATGTTAGTATCCATTAATAAATTAAATTTAGTGATGAATTTTTGGGTTAATGAGTTGGGTTGGGATGCTCTTGCCCTTGCTATACATCCATCACTTTTTGCTATAAGTTTGGAAAAAAAGGACCATTCCAAGGGCCCCAATTGTGCAATTCCTGCTAAAGAAAGGTCCGAAATCCTTAGTCGAATTTATAAGCTTTTTGTTATTTATGCTGTCGACATTTTGCTGATTTTTGAGCTATTTGCAGGATTGATTAACTCATTGGAGGAAGTTAAGGGTTTAGGGTTTCATCCTTCAACAACTACTTTTGGAATTGCTTTGATGGCCAAGAAAGGTATGAGTAAAAAACTTTGGGATGAGAAAGTTGACGTCTTTAAGAAATGGGGTTGGTCTGATGAAGATGTTATTCATGCATTTCGGATGCAGCCTTATTTGATGCTGACTTCAATTGATAAGATTGATTCGTTAATGAGTTTTTGGGTCAATCAATTGGTTGGAATTCATTGGCACTTACCAAACTAA
Protein sequence

>MsG0280008014.01.T01

MLRWMSGKTRHNRIRNDTIREGVGVAPIIEKLVENRLRWFGHVERRPVDAVLRRVDQMEESQVKRGRGRPKKTIRETIRKDLEIQPLFLSHTSSTLLGLTHNLLPNSAPLTKLCFKNAQKPDSVLKFFRNHGFFDSQLRDMIAKEPRLLSYDPSKRILPKFQFFFSKGASTSDIINLVSKNPTVLSASLNNQMVPTYELAYTFLKSPRDTLACAVHNRNFFGATRVPNNIKLLIKNGVSDSNIRRLLRSRSPILYSGPGDMLKLLEELKVLGFNPSKTSFHLALIAKASINKTLWKDKVDTFKKWGWSEQVSFEAFRRRPECMLVSINKLNLVMNFWVNELGWDALALAIHPSLFAISLEKKDHSKGPNCAIPAKERSEILSRIYKLFVIYAVDILLIFELFAGLINSLEEVKGLGFHPSTTTFGIALMAKKGMSKKLWDEKVDVFKKWGWSDEDVIHAFRMQPYLMLTSIDKIDSLMSFWVNQLVGIHWHLPN*