Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280008025.01.T01 | XP_013463290.1 | 76.85 | 419 | 88 | 2 | 1 | 419 | 1 | 410 | 0 | 641 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280008025.01.T01 | A0A072V6R1 | 76.850 | 419 | 88 | 2 | 1 | 419 | 1 | 410 | 0.0 | 641 |
| Gene ID | Type | Classification |
|---|---|---|
| MsG0280008025.01.T01 | TR | mTERF |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280008025.01.T01 | MTR_2g437240 | 76.850 | 419 | 88 | 2 | 1 | 419 | 1 | 410 | 0.0 | 641 |
| MsG0280008025.01.T01 | MTR_2g437200 | 72.727 | 407 | 102 | 1 | 1 | 407 | 1 | 398 | 0.0 | 598 |
| MsG0280008025.01.T01 | MTR_2g438020 | 73.107 | 383 | 102 | 1 | 40 | 422 | 70 | 451 | 0.0 | 557 |
| MsG0280008025.01.T01 | MTR_2g437150 | 62.588 | 425 | 106 | 6 | 17 | 423 | 17 | 406 | 7.64e-178 | 502 |
| MsG0280008025.01.T01 | MTR_2g437170 | 61.751 | 434 | 114 | 6 | 3 | 419 | 4 | 402 | 5.04e-176 | 498 |
| MsG0280008025.01.T01 | MTR_2g437120 | 61.395 | 430 | 119 | 5 | 3 | 421 | 4 | 397 | 4.62e-173 | 491 |
| MsG0280008025.01.T01 | MTR_2g437960 | 64.829 | 381 | 97 | 2 | 41 | 419 | 53 | 398 | 2.32e-170 | 483 |
| MsG0280008025.01.T01 | MTR_2g437960 | 64.829 | 381 | 97 | 2 | 41 | 419 | 53 | 398 | 3.10e-170 | 484 |
| MsG0280008025.01.T01 | MTR_2g437160 | 62.060 | 398 | 111 | 4 | 30 | 423 | 50 | 411 | 2.28e-167 | 476 |
| MsG0280008025.01.T01 | MTR_2g437100 | 61.823 | 406 | 111 | 4 | 6 | 407 | 30 | 395 | 1.82e-164 | 468 |
| MsG0280008025.01.T01 | MTR_2g437180 | 58.161 | 435 | 126 | 6 | 3 | 423 | 4 | 396 | 8.98e-164 | 466 |
| MsG0280008025.01.T01 | MTR_2g076320 | 59.165 | 431 | 129 | 5 | 3 | 422 | 4 | 398 | 2.49e-162 | 463 |
| MsG0280008025.01.T01 | MTR_2g438010 | 58.140 | 430 | 135 | 4 | 3 | 422 | 24 | 418 | 1.08e-161 | 462 |
| MsG0280008025.01.T01 | MTR_2g437990 | 58.237 | 431 | 132 | 6 | 3 | 422 | 4 | 397 | 9.82e-160 | 457 |
| MsG0280008025.01.T01 | MTR_2g437130 | 56.883 | 385 | 128 | 2 | 38 | 422 | 40 | 386 | 7.19e-148 | 426 |
| MsG0280008025.01.T01 | MTR_2g437260 | 51.816 | 413 | 154 | 5 | 1 | 411 | 1 | 370 | 9.93e-142 | 410 |
| MsG0280008025.01.T01 | MTR_2g437940 | 57.215 | 395 | 100 | 4 | 30 | 422 | 42 | 369 | 7.90e-140 | 404 |
| MsG0280008025.01.T01 | MTR_2g437060 | 52.174 | 391 | 145 | 5 | 27 | 415 | 43 | 393 | 2.01e-132 | 386 |
| MsG0280008025.01.T01 | MTR_2g437080 | 50.376 | 399 | 156 | 4 | 23 | 419 | 24 | 382 | 2.03e-132 | 386 |
| MsG0280008025.01.T01 | MTR_2g436440 | 50.500 | 400 | 156 | 4 | 23 | 420 | 30 | 389 | 2.25e-132 | 386 |
| MsG0280008025.01.T01 | MTR_2g437020 | 49.528 | 424 | 169 | 7 | 1 | 420 | 1 | 383 | 3.97e-129 | 377 |
| MsG0280008025.01.T01 | MTR_2g437040 | 49.227 | 388 | 157 | 4 | 34 | 419 | 33 | 382 | 4.73e-123 | 362 |
| MsG0280008025.01.T01 | MTR_2g437030 | 47.980 | 396 | 164 | 4 | 27 | 420 | 114 | 469 | 3.73e-119 | 355 |
| MsG0280008025.01.T01 | MTR_4g119550 | 47.368 | 380 | 161 | 4 | 37 | 415 | 47 | 388 | 3.57e-116 | 345 |
| MsG0280008025.01.T01 | MTR_2g436400 | 47.493 | 379 | 159 | 4 | 35 | 411 | 41 | 381 | 5.10e-113 | 337 |
| MsG0280008025.01.T01 | MTR_2g436460 | 45.745 | 376 | 165 | 5 | 34 | 408 | 40 | 377 | 1.60e-99 | 302 |
| MsG0280008025.01.T01 | MTR_2g437160 | 75.000 | 188 | 47 | 0 | 236 | 423 | 133 | 320 | 1.97e-97 | 295 |
| MsG0280008025.01.T01 | MTR_2g437160 | 29.455 | 275 | 128 | 9 | 3 | 214 | 15 | 286 | 1.92e-19 | 89.0 |
| MsG0280008025.01.T01 | MTR_4g120380 | 43.583 | 374 | 173 | 2 | 32 | 405 | 35 | 370 | 1.49e-95 | 291 |
| MsG0280008025.01.T01 | MTR_4g119580 | 42.391 | 368 | 174 | 2 | 38 | 405 | 41 | 370 | 2.61e-90 | 278 |
| MsG0280008025.01.T01 | MTR_4g120380 | 44.068 | 354 | 160 | 2 | 32 | 385 | 35 | 350 | 7.48e-90 | 278 |
| MsG0280008025.01.T01 | MTR_2g019840 | 39.798 | 397 | 195 | 7 | 21 | 414 | 23 | 378 | 2.58e-82 | 258 |
| MsG0280008025.01.T01 | MTR_2g019810 | 41.755 | 376 | 167 | 7 | 39 | 407 | 29 | 359 | 2.90e-81 | 254 |
| MsG0280008025.01.T01 | MTR_2g437090 | 57.229 | 166 | 71 | 0 | 250 | 415 | 1 | 166 | 2.44e-64 | 204 |
| MsG0280008025.01.T01 | MTR_3g085240 | 46.964 | 247 | 75 | 7 | 1 | 246 | 21 | 212 | 1.62e-51 | 174 |
| MsG0280008025.01.T01 | MTR_3g085240 | 61.957 | 92 | 18 | 1 | 307 | 398 | 174 | 248 | 7.04e-27 | 108 |
| MsG0280008025.01.T01 | MTR_4g119570 | 38.492 | 252 | 119 | 2 | 154 | 405 | 14 | 229 | 5.47e-49 | 166 |
| MsG0280008025.01.T01 | MTR_3g450500 | 28.226 | 372 | 223 | 4 | 40 | 405 | 37 | 370 | 1.71e-48 | 169 |
| MsG0280008025.01.T01 | MTR_4g007490 | 28.499 | 393 | 241 | 5 | 17 | 405 | 12 | 368 | 4.26e-47 | 166 |
| MsG0280008025.01.T01 | MTR_2g436370 | 39.011 | 182 | 73 | 3 | 35 | 214 | 40 | 185 | 1.49e-34 | 127 |
| MsG0280008025.01.T01 | MTR_8g081000 | 25.740 | 338 | 212 | 3 | 70 | 405 | 85 | 385 | 1.24e-29 | 119 |
| MsG0280008025.01.T01 | MTR_8g081000 | 25.731 | 342 | 215 | 3 | 66 | 405 | 81 | 385 | 1.49e-29 | 119 |
| MsG0280008025.01.T01 | MTR_8g081000 | 25.731 | 342 | 215 | 3 | 66 | 405 | 81 | 385 | 1.74e-29 | 119 |
| MsG0280008025.01.T01 | MTR_8g080990 | 28.012 | 332 | 200 | 4 | 72 | 401 | 74 | 368 | 1.81e-29 | 118 |
| MsG0280008025.01.T01 | MTR_4g049400 | 41.732 | 127 | 65 | 3 | 30 | 147 | 37 | 163 | 2.54e-24 | 100 |
| MsG0280008025.01.T01 | MTR_2g436380 | 43.434 | 99 | 53 | 2 | 250 | 348 | 1 | 96 | 1.73e-15 | 77.0 |
| MsG0280008025.01.T01 | MTR_4g119615 | 51.667 | 60 | 27 | 2 | 338 | 397 | 17 | 74 | 1.81e-11 | 60.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280008025.01.T01 | AT5G07900 | 31.967 | 366 | 211 | 3 | 42 | 404 | 69 | 399 | 1.94e-56 | 191 |
| MsG0280008025.01.T01 | AT1G21150 | 30.411 | 365 | 216 | 3 | 41 | 402 | 55 | 384 | 2.43e-46 | 164 |
| MsG0280008025.01.T01 | AT1G21150 | 30.184 | 381 | 220 | 4 | 25 | 402 | 11 | 348 | 2.82e-46 | 163 |
| MsG0280008025.01.T01 | AT1G21150 | 30.411 | 365 | 216 | 3 | 41 | 402 | 119 | 448 | 1.12e-45 | 164 |
| MsG0280008025.01.T01 | AT1G61980 | 27.296 | 392 | 210 | 9 | 36 | 390 | 46 | 399 | 4.56e-35 | 134 |
| MsG0280008025.01.T01 | AT1G61980 | 27.296 | 392 | 210 | 9 | 36 | 390 | 46 | 399 | 4.56e-35 | 134 |
| MsG0280008025.01.T01 | AT1G61980 | 27.296 | 392 | 210 | 9 | 36 | 390 | 46 | 399 | 4.56e-35 | 134 |
| MsG0280008025.01.T01 | AT1G61970 | 26.551 | 403 | 219 | 11 | 28 | 392 | 38 | 401 | 1.77e-33 | 130 |
| MsG0280008025.01.T01 | AT1G61970 | 26.551 | 403 | 219 | 11 | 28 | 392 | 38 | 401 | 1.77e-33 | 130 |
| MsG0280008025.01.T01 | AT1G61970 | 26.551 | 403 | 219 | 11 | 28 | 392 | 38 | 401 | 1.77e-33 | 130 |
| MsG0280008025.01.T01 | AT1G61970 | 26.551 | 403 | 219 | 11 | 28 | 392 | 38 | 401 | 1.77e-33 | 130 |
| MsG0280008025.01.T01 | AT1G61970 | 26.551 | 403 | 219 | 11 | 28 | 392 | 38 | 401 | 1.77e-33 | 130 |
| MsG0280008025.01.T01 | AT1G61970 | 26.551 | 403 | 219 | 11 | 28 | 392 | 38 | 401 | 1.77e-33 | 130 |
| MsG0280008025.01.T01 | AT1G61970 | 26.551 | 403 | 219 | 11 | 28 | 392 | 38 | 401 | 1.77e-33 | 130 |
| MsG0280008025.01.T01 | AT1G61990 | 27.020 | 396 | 203 | 8 | 40 | 395 | 50 | 399 | 4.93e-32 | 126 |
| MsG0280008025.01.T01 | AT1G61990 | 27.020 | 396 | 203 | 8 | 40 | 395 | 50 | 399 | 4.93e-32 | 126 |
| MsG0280008025.01.T01 | AT1G62120 | 25.974 | 385 | 205 | 6 | 27 | 367 | 33 | 381 | 7.79e-27 | 112 |
| MsG0280008025.01.T01 | AT3G46950 | 27.244 | 312 | 180 | 6 | 16 | 322 | 22 | 291 | 1.31e-26 | 111 |
| MsG0280008025.01.T01 | AT1G62085 | 27.123 | 365 | 221 | 11 | 42 | 366 | 55 | 414 | 2.08e-25 | 108 |
| MsG0280008025.01.T01 | AT1G62085 | 27.123 | 365 | 221 | 11 | 42 | 366 | 55 | 414 | 2.08e-25 | 108 |
| MsG0280008025.01.T01 | AT5G64950 | 26.098 | 387 | 230 | 9 | 34 | 405 | 31 | 376 | 1.79e-24 | 104 |
| MsG0280008025.01.T01 | AT1G61960 | 27.244 | 312 | 186 | 5 | 11 | 319 | 20 | 293 | 9.25e-22 | 97.4 |
| MsG0280008025.01.T01 | AT5G23930 | 26.741 | 359 | 225 | 10 | 42 | 367 | 55 | 408 | 6.50e-21 | 95.1 |
| MsG0280008025.01.T01 | AT1G62150 | 27.402 | 281 | 167 | 7 | 40 | 319 | 56 | 300 | 3.24e-19 | 90.1 |
| MsG0280008025.01.T01 | AT1G62110 | 25.949 | 316 | 190 | 7 | 5 | 319 | 22 | 294 | 3.25e-19 | 90.1 |
| MsG0280008025.01.T01 | AT1G56380 | 23.873 | 377 | 245 | 12 | 37 | 390 | 22 | 379 | 3.39e-17 | 83.6 |
| MsG0280008025.01.T01 | AT1G56380 | 23.873 | 377 | 245 | 12 | 37 | 390 | 11 | 368 | 3.85e-17 | 83.2 |
| MsG0280008025.01.T01 | AT1G79220 | 21.194 | 335 | 222 | 6 | 76 | 406 | 82 | 378 | 4.52e-11 | 64.7 |
Find 73 sgRNAs with CRISPR-Local
Find 98 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAACTTGATTTGACGAATTT+AGG | 0.087763 | 2:-24382202 | None:intergenic |
| CATCCTTCATTGACTACTTT+TGG | 0.124797 | 2:+24382586 | MsG0280008025.01.T01:CDS |
| AACTGCAAACCCTACAATTT+TGG | 0.127835 | 2:+24382297 | MsG0280008025.01.T01:CDS |
| GTCAATTTGATGTCTGATTT+TGG | 0.159011 | 2:+24382460 | MsG0280008025.01.T01:CDS |
| CGAACAAGGCCATCTATATT+TGG | 0.170334 | 2:+24382514 | MsG0280008025.01.T01:CDS |
| CAAGTTTGTTTGCTCCTTTA+AGG | 0.209354 | 2:+24382960 | MsG0280008025.01.T01:CDS |
| ATAATCAGATTCCTCCTTAA+AGG | 0.220620 | 2:-24382974 | None:intergenic |
| TAGAGGAAGTTAAGGGTTTA+GGG | 0.232380 | 2:+24382560 | MsG0280008025.01.T01:CDS |
| TTAGAGGAAGTTAAGGGTTT+AGG | 0.237816 | 2:+24382559 | MsG0280008025.01.T01:CDS |
| AGACCAGCCCCATTTGTTAA+AGG | 0.263441 | 2:-24382668 | None:intergenic |
| AACTTGATTTGACGAATTTA+GGG | 0.271121 | 2:-24382201 | None:intergenic |
| TGGCATGTCATTCACAAATT+AGG | 0.295156 | 2:+24383050 | MsG0280008025.01.T01:CDS |
| ATGCCATTCTTTGTTTAATT+CGG | 0.306732 | 2:+24382389 | MsG0280008025.01.T01:CDS |
| AAGCTAGATTCCAAAATTGT+AGG | 0.321455 | 2:-24382307 | None:intergenic |
| AACTTCTCAGAATATCTAAA+TGG | 0.329338 | 2:-24382928 | None:intergenic |
| CCTTGTCGTTGTTGATGATA+TGG | 0.332658 | 2:-24381834 | None:intergenic |
| TCCTACCTCATTCACAAATT+CGG | 0.342776 | 2:+24381935 | MsG0280008025.01.T01:CDS |
| ACAAAACATCTGTGGTAGTT+TGG | 0.353819 | 2:-24382812 | None:intergenic |
| ATTGAAACCAACATCAAATT+AGG | 0.361121 | 2:-24382724 | None:intergenic |
| TAAGTCATTAGAGGAAGTTA+AGG | 0.381295 | 2:+24382552 | MsG0280008025.01.T01:CDS |
| GACATTCTTCGTATGGTTGT+AGG | 0.384943 | 2:+24382175 | MsG0280008025.01.T01:CDS |
| AAGAAGTTGAGAACTGAATC+TGG | 0.385783 | 2:-24382019 | None:intergenic |
| TCCTTTGAACCAAATATAGA+TGG | 0.398078 | 2:-24382523 | None:intergenic |
| ACAAAGAATGGCATCCTTGT+TGG | 0.401490 | 2:-24382380 | None:intergenic |
| AAGTTGACACCTTTAACAAA+TGG | 0.405620 | 2:+24382659 | MsG0280008025.01.T01:CDS |
| ATCAGAGGAAGAAGCACCTT+TGG | 0.406640 | 2:-24382260 | None:intergenic |
| GGATTTGATTAAGTCATTAG+AGG | 0.426999 | 2:+24382543 | MsG0280008025.01.T01:CDS |
| AAGTCATTAGAGGAAGTTAA+GGG | 0.427528 | 2:+24382553 | MsG0280008025.01.T01:CDS |
| GCCATCTATATTTGGTTCAA+AGG | 0.427799 | 2:+24382522 | MsG0280008025.01.T01:CDS |
| AGTTGACACCTTTAACAAAT+GGG | 0.435374 | 2:+24382660 | MsG0280008025.01.T01:CDS |
| TCAATTGGGTTGGAATTCCT+TGG | 0.440659 | 2:+24382783 | MsG0280008025.01.T01:CDS |
| ATTATCCACGGTAAGGTGAT+AGG | 0.445267 | 2:-24382437 | None:intergenic |
| AGCTAGATTCCAAAATTGTA+GGG | 0.447131 | 2:-24382306 | None:intergenic |
| GTCAGAGGTAGAAGCACCTT+TGG | 0.453352 | 2:-24382155 | None:intergenic |
| TTTCATGCAATGCCCGCAAA+AGG | 0.462246 | 2:+24382104 | MsG0280008025.01.T01:CDS |
| TACCTCTGACATTCTTCGTA+TGG | 0.462578 | 2:+24382168 | MsG0280008025.01.T01:CDS |
| AGAAAATTGAAGTGCGGTTG+AGG | 0.482264 | 2:-24381861 | None:intergenic |
| ATGCCGAATTAAACAAAGAA+TGG | 0.493192 | 2:-24382392 | None:intergenic |
| TCTAAATGGTGTAACTAAGC+TGG | 0.495852 | 2:-24382914 | None:intergenic |
| TTTGGGTCAATCAATTGGGT+TGG | 0.506924 | 2:+24382773 | MsG0280008025.01.T01:CDS |
| GTTGCAGCCTAATTTGATGT+TGG | 0.507199 | 2:+24382717 | MsG0280008025.01.T01:CDS |
| ACACCTTTAACAAATGGGGC+TGG | 0.542117 | 2:+24382665 | MsG0280008025.01.T01:CDS |
| AATTGCATAACTGAGGCCCT+TGG | 0.542717 | 2:-24382859 | None:intergenic |
| AGAAACCGAATTTGTGAATG+AGG | 0.551459 | 2:-24381940 | None:intergenic |
| ACCCCAAAAGTAGTCAATGA+AGG | 0.557831 | 2:-24382589 | None:intergenic |
| TTGCTAGATTGCTTCGAACA+AGG | 0.560619 | 2:+24382500 | MsG0280008025.01.T01:CDS |
| TGGAGAAAAGGATCATTCCA+AGG | 0.570897 | 2:+24382842 | MsG0280008025.01.T01:CDS |
| AATTGACATTATCCACGGTA+AGG | 0.577398 | 2:-24382444 | None:intergenic |
| GCATTGCATGAAAGAAGCCA+TGG | 0.600586 | 2:-24382094 | None:intergenic |
| ACCGAATTTGTGAATGAGGT+AGG | 0.601172 | 2:-24381936 | None:intergenic |
| TGGTAGTTTGGTAAGTGCCA+AGG | 0.603616 | 2:-24382800 | None:intergenic |
| GTTTGTTTGCTCCTTTAAGG+AGG | 0.603996 | 2:+24382963 | MsG0280008025.01.T01:CDS |
| AATGAAACTTGCATACACAA+TGG | 0.609213 | 2:+24383020 | MsG0280008025.01.T01:CDS |
| TAACAATGCAACAATATCAG+AGG | 0.616711 | 2:-24382275 | None:intergenic |
| GAAGCTTTGAGTGCGAATTG+AGG | 0.619241 | 2:-24381965 | None:intergenic |
| CAAAAGAAATTGCATAACTG+AGG | 0.634260 | 2:-24382866 | None:intergenic |
| CATCAAATTGACATTATCCA+CGG | 0.634534 | 2:-24382449 | None:intergenic |
| GTTGACACCTTTAACAAATG+GGG | 0.635802 | 2:+24382661 | MsG0280008025.01.T01:CDS |
| CGTTGTTGATGATATGGCAA+AGG | 0.636668 | 2:-24381828 | None:intergenic |
| TGAATCTGAAGCGATGGTGG+TGG | 0.637164 | 2:-24381897 | None:intergenic |
| AAACTAAAACAAAACATCTG+TGG | 0.637333 | 2:-24382820 | None:intergenic |
| GGAGAAAAGGATCATTCCAA+GGG | 0.639024 | 2:+24382843 | MsG0280008025.01.T01:CDS |
| GCATACACAATGGAAAACAA+TGG | 0.644592 | 2:+24383030 | MsG0280008025.01.T01:CDS |
| TGAATTTGAATCTGAAGCGA+TGG | 0.652349 | 2:-24381903 | None:intergenic |
| CCATATCATCAACAACGACA+AGG | 0.666529 | 2:+24381834 | MsG0280008025.01.T01:CDS |
| ATTTGAATCTGAAGCGATGG+TGG | 0.672236 | 2:-24381900 | None:intergenic |
| AACCATACGAAGAATGTCAG+AGG | 0.672395 | 2:-24382170 | None:intergenic |
| TCTGAGAGAAAATTGAAGTG+CGG | 0.689418 | 2:-24381867 | None:intergenic |
| GCATCATCAAAAGAGAACCA+TGG | 0.694296 | 2:+24382077 | MsG0280008025.01.T01:CDS |
| TAGGTTTCTGAAAACCAACA+AGG | 0.701717 | 2:+24382366 | MsG0280008025.01.T01:CDS |
| GAATACCTATCACCTTACCG+TGG | 0.713125 | 2:+24382432 | MsG0280008025.01.T01:CDS |
| ATGATATGGCAAAGGCATCG+CGG | 0.725832 | 2:-24381820 | None:intergenic |
| TTATCTATTAAAGCTATACG+AGG | 0.742253 | 2:+24382993 | MsG0280008025.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TACTTAAAAATTCAAAAAGA+GGG | - | Chr2:24382348-24382367 | None:intergenic | 15.0% |
| !! | TGATTAAAAATTGAAACTTT+GGG | - | Chr2:24382135-24382154 | None:intergenic | 15.0% |
| !! | AATGTTTGAGTAAAAAACTT+TGG | + | Chr2:24382629-24382648 | MsG0280008025.01.T01:CDS | 20.0% |
| !! | ATGTTTGAGTAAAAAACTTT+GGG | + | Chr2:24382630-24382649 | MsG0280008025.01.T01:CDS | 20.0% |
| !! | CTACTTAAAAATTCAAAAAG+AGG | - | Chr2:24382349-24382368 | None:intergenic | 20.0% |
| !! | GTGATTAAAAATTGAAACTT+TGG | - | Chr2:24382136-24382155 | None:intergenic | 20.0% |
| !!! | CTCTTTTTGAATTTTTAAGT+AGG | + | Chr2:24382347-24382366 | MsG0280008025.01.T01:CDS | 20.0% |
| !!! | TTTCAATTTTTAATCACCAA+AGG | + | Chr2:24382139-24382158 | MsG0280008025.01.T01:CDS | 20.0% |
| !!! | TTTCATTTTTTTCTATCCAA+AGG | + | Chr2:24382244-24382263 | MsG0280008025.01.T01:CDS | 20.0% |
| ! | AAACTAAAACAAAACATCTG+TGG | - | Chr2:24382823-24382842 | None:intergenic | 25.0% |
| ! | AACTTCTCAGAATATCTAAA+TGG | - | Chr2:24382931-24382950 | None:intergenic | 25.0% |
| ! | ATTGAAACCAACATCAAATT+AGG | - | Chr2:24382727-24382746 | None:intergenic | 25.0% |
| ! | TTATCTATTAAAGCTATACG+AGG | + | Chr2:24382993-24383012 | MsG0280008025.01.T01:CDS | 25.0% |
| !! | AAACTTGATTTGACGAATTT+AGG | - | Chr2:24382205-24382224 | None:intergenic | 25.0% |
| !! | AACTTGATTTGACGAATTTA+GGG | - | Chr2:24382204-24382223 | None:intergenic | 25.0% |
| !! | ATGCAATTTCTTTTGATGAA+AGG | + | Chr2:24382874-24382893 | MsG0280008025.01.T01:CDS | 25.0% |
| !! | ATGCCATTCTTTGTTTAATT+CGG | + | Chr2:24382389-24382408 | MsG0280008025.01.T01:CDS | 25.0% |
| !!! | ACAGATGTTTTGTTTTAGTT+TGG | + | Chr2:24382822-24382841 | MsG0280008025.01.T01:CDS | 25.0% |
| !!! | TGATTTGTTGATGAGTTTTT+GGG | + | Chr2:24382756-24382775 | MsG0280008025.01.T01:CDS | 25.0% |
| !!! | TTGATTTGTTGATGAGTTTT+TGG | + | Chr2:24382755-24382774 | MsG0280008025.01.T01:CDS | 25.0% |
| !!! | TTTGTTTTAGTTTGGAGAAA+AGG | + | Chr2:24382830-24382849 | MsG0280008025.01.T01:CDS | 25.0% |
| !!! | TTTTTTACTCAAACATTGCT+TGG | - | Chr2:24382626-24382645 | None:intergenic | 25.0% |
| AAGCTAGATTCCAAAATTGT+AGG | - | Chr2:24382310-24382329 | None:intergenic | 30.0% | |
| AAGTCATTAGAGGAAGTTAA+GGG | + | Chr2:24382553-24382572 | MsG0280008025.01.T01:CDS | 30.0% | |
| AAGTTGACACCTTTAACAAA+TGG | + | Chr2:24382659-24382678 | MsG0280008025.01.T01:CDS | 30.0% | |
| AATGAAACTTGCATACACAA+TGG | + | Chr2:24383020-24383039 | MsG0280008025.01.T01:CDS | 30.0% | |
| AGCTAGATTCCAAAATTGTA+GGG | - | Chr2:24382309-24382328 | None:intergenic | 30.0% | |
| AGTTGACACCTTTAACAAAT+GGG | + | Chr2:24382660-24382679 | MsG0280008025.01.T01:CDS | 30.0% | |
| ATAATCAGATTCCTCCTTAA+AGG | - | Chr2:24382977-24382996 | None:intergenic | 30.0% | |
| ATGCCGAATTAAACAAAGAA+TGG | - | Chr2:24382395-24382414 | None:intergenic | 30.0% | |
| CAAAAGAAATTGCATAACTG+AGG | - | Chr2:24382869-24382888 | None:intergenic | 30.0% | |
| CATCAAATTGACATTATCCA+CGG | - | Chr2:24382452-24382471 | None:intergenic | 30.0% | |
| CTCAACTTCTTCAAAAATCA+TGG | + | Chr2:24382031-24382050 | MsG0280008025.01.T01:CDS | 30.0% | |
| GGATTTGATTAAGTCATTAG+AGG | + | Chr2:24382543-24382562 | MsG0280008025.01.T01:CDS | 30.0% | |
| TAACAATGCAACAATATCAG+AGG | - | Chr2:24382278-24382297 | None:intergenic | 30.0% | |
| TAAGTCATTAGAGGAAGTTA+AGG | + | Chr2:24382552-24382571 | MsG0280008025.01.T01:CDS | 30.0% | |
| TCCTTTGAACCAAATATAGA+TGG | - | Chr2:24382526-24382545 | None:intergenic | 30.0% | |
| ! | GTCAATTTGATGTCTGATTT+TGG | + | Chr2:24382460-24382479 | MsG0280008025.01.T01:CDS | 30.0% |
| !! | ATCCTTCATTGACTACTTTT+GGG | + | Chr2:24382587-24382606 | MsG0280008025.01.T01:CDS | 30.0% |
| !!! | AGTTTTTGGGTCAATCAATT+GGG | + | Chr2:24382769-24382788 | MsG0280008025.01.T01:CDS | 30.0% |
| !!! | GGTTTTGAAACGAAGATTTT+TGG | - | Chr2:24381990-24382009 | None:intergenic | 30.0% |
| !!! | TACAATTTTGGAATCTAGCT+TGG | + | Chr2:24382309-24382328 | MsG0280008025.01.T01:CDS | 30.0% |
| AAGAAGTTGAGAACTGAATC+TGG | - | Chr2:24382022-24382041 | None:intergenic | 35.0% | |
| AATTGACATTATCCACGGTA+AGG | - | Chr2:24382447-24382466 | None:intergenic | 35.0% | |
| ACAAAACATCTGTGGTAGTT+TGG | - | Chr2:24382815-24382834 | None:intergenic | 35.0% | |
| AGAAACCGAATTTGTGAATG+AGG | - | Chr2:24381943-24381962 | None:intergenic | 35.0% | |
| GCATACACAATGGAAAACAA+TGG | + | Chr2:24383030-24383049 | MsG0280008025.01.T01:CDS | 35.0% | |
| GTTGACACCTTTAACAAATG+GGG | + | Chr2:24382661-24382680 | MsG0280008025.01.T01:CDS | 35.0% | |
| TAGAGGAAGTTAAGGGTTTA+GGG | + | Chr2:24382560-24382579 | MsG0280008025.01.T01:CDS | 35.0% | |
| TCCTACCTCATTCACAAATT+CGG | + | Chr2:24381935-24381954 | MsG0280008025.01.T01:CDS | 35.0% | |
| TCTAAATGGTGTAACTAAGC+TGG | - | Chr2:24382917-24382936 | None:intergenic | 35.0% | |
| TCTGAGAGAAAATTGAAGTG+CGG | - | Chr2:24381870-24381889 | None:intergenic | 35.0% | |
| TTAGAGGAAGTTAAGGGTTT+AGG | + | Chr2:24382559-24382578 | MsG0280008025.01.T01:CDS | 35.0% | |
| ! | AACTGCAAACCCTACAATTT+TGG | + | Chr2:24382297-24382316 | MsG0280008025.01.T01:CDS | 35.0% |
| ! | CAAGTTTGTTTGCTCCTTTA+AGG | + | Chr2:24382960-24382979 | MsG0280008025.01.T01:CDS | 35.0% |
| ! | GCCATCTATATTTGGTTCAA+AGG | + | Chr2:24382522-24382541 | MsG0280008025.01.T01:CDS | 35.0% |
| ! | TAGGTTTCTGAAAACCAACA+AGG | + | Chr2:24382366-24382385 | MsG0280008025.01.T01:CDS | 35.0% |
| ! | TGAATTTGAATCTGAAGCGA+TGG | - | Chr2:24381906-24381925 | None:intergenic | 35.0% |
| !! | CATCCTTCATTGACTACTTT+TGG | + | Chr2:24382586-24382605 | MsG0280008025.01.T01:CDS | 35.0% |
| !! | TCCTTCATTGACTACTTTTG+GGG | + | Chr2:24382588-24382607 | MsG0280008025.01.T01:CDS | 35.0% |
| !!! | AACTGAATCTGGTTTTTGTG+AGG | - | Chr2:24382011-24382030 | None:intergenic | 35.0% |
| !!! | GAGTTTTTGGGTCAATCAAT+TGG | + | Chr2:24382768-24382787 | MsG0280008025.01.T01:CDS | 35.0% |
| AACCATACGAAGAATGTCAG+AGG | - | Chr2:24382173-24382192 | None:intergenic | 40.0% | |
| ACAAAGAATGGCATCCTTGT+TGG | - | Chr2:24382383-24382402 | None:intergenic | 40.0% | |
| ACCCCAAAAGTAGTCAATGA+AGG | - | Chr2:24382592-24382611 | None:intergenic | 40.0% | |
| ACCGAATTTGTGAATGAGGT+AGG | - | Chr2:24381939-24381958 | None:intergenic | 40.0% | |
| AGAAAATTGAAGTGCGGTTG+AGG | - | Chr2:24381864-24381883 | None:intergenic | 40.0% | |
| ATTATCCACGGTAAGGTGAT+AGG | - | Chr2:24382440-24382459 | None:intergenic | 40.0% | |
| CCATATCATCAACAACGACA+AGG | + | Chr2:24381834-24381853 | MsG0280008025.01.T01:CDS | 40.0% | |
| CGAACAAGGCCATCTATATT+TGG | + | Chr2:24382514-24382533 | MsG0280008025.01.T01:CDS | 40.0% | |
| GACATTCTTCGTATGGTTGT+AGG | + | Chr2:24382175-24382194 | MsG0280008025.01.T01:CDS | 40.0% | |
| GCATCATCAAAAGAGAACCA+TGG | + | Chr2:24382077-24382096 | MsG0280008025.01.T01:CDS | 40.0% | |
| GGAGAAAAGGATCATTCCAA+GGG | + | Chr2:24382843-24382862 | MsG0280008025.01.T01:CDS | 40.0% | |
| GTTGCAGCCTAATTTGATGT+TGG | + | Chr2:24382717-24382736 | MsG0280008025.01.T01:CDS | 40.0% | |
| TACCTCTGACATTCTTCGTA+TGG | + | Chr2:24382168-24382187 | MsG0280008025.01.T01:CDS | 40.0% | |
| TGGAGAAAAGGATCATTCCA+AGG | + | Chr2:24382842-24382861 | MsG0280008025.01.T01:CDS | 40.0% | |
| TTGCTAGATTGCTTCGAACA+AGG | + | Chr2:24382500-24382519 | MsG0280008025.01.T01:CDS | 40.0% | |
| TTTGGGTCAATCAATTGGGT+TGG | + | Chr2:24382773-24382792 | MsG0280008025.01.T01:CDS | 40.0% | |
| ! | ATTTGAATCTGAAGCGATGG+TGG | - | Chr2:24381903-24381922 | None:intergenic | 40.0% |
| ! | GTTTGTTTGCTCCTTTAAGG+AGG | + | Chr2:24382963-24382982 | MsG0280008025.01.T01:CDS | 40.0% |
| !! | ACTTTGGGAGAATCCTTTTG+CGG | - | Chr2:24382120-24382139 | None:intergenic | 40.0% |
| !! | CCTTGTCGTTGTTGATGATA+TGG | - | Chr2:24381837-24381856 | None:intergenic | 40.0% |
| !! | CGTTGTTGATGATATGGCAA+AGG | - | Chr2:24381831-24381850 | None:intergenic | 40.0% |
| !! | TCAATTGGGTTGGAATTCCT+TGG | + | Chr2:24382783-24382802 | MsG0280008025.01.T01:CDS | 40.0% |
| AATTGCATAACTGAGGCCCT+TGG | - | Chr2:24382862-24382881 | None:intergenic | 45.0% | |
| ACACCTTTAACAAATGGGGC+TGG | + | Chr2:24382665-24382684 | MsG0280008025.01.T01:CDS | 45.0% | |
| GAATACCTATCACCTTACCG+TGG | + | Chr2:24382432-24382451 | MsG0280008025.01.T01:CDS | 45.0% | |
| GCATTGCATGAAAGAAGCCA+TGG | - | Chr2:24382097-24382116 | None:intergenic | 45.0% | |
| TGGTAGTTTGGTAAGTGCCA+AGG | - | Chr2:24382803-24382822 | None:intergenic | 45.0% | |
| TTTCATGCAATGCCCGCAAA+AGG | + | Chr2:24382104-24382123 | MsG0280008025.01.T01:CDS | 45.0% | |
| ! | AGACCAGCCCCATTTGTTAA+AGG | - | Chr2:24382671-24382690 | None:intergenic | 45.0% |
| !! | ATCAGAGGAAGAAGCACCTT+TGG | - | Chr2:24382263-24382282 | None:intergenic | 45.0% |
| !! | ATGATATGGCAAAGGCATCG+CGG | - | Chr2:24381823-24381842 | None:intergenic | 45.0% |
| !! | CTTTGGGAGAATCCTTTTGC+GGG | - | Chr2:24382119-24382138 | None:intergenic | 45.0% |
| !! | GAAGCTTTGAGTGCGAATTG+AGG | - | Chr2:24381968-24381987 | None:intergenic | 45.0% |
| !!! | GACTACTTTTGGGGTTGCTT+TGG | + | Chr2:24382597-24382616 | MsG0280008025.01.T01:CDS | 45.0% |
| ! | TGAATCTGAAGCGATGGTGG+TGG | - | Chr2:24381900-24381919 | None:intergenic | 50.0% |
| !! | GTCAGAGGTAGAAGCACCTT+TGG | - | Chr2:24382158-24382177 | None:intergenic | 50.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr2 | gene | 24381800 | 24383071 | 24381800 | ID=MsG0280008025.01;Name=MsG0280008025.01 |
| Chr2 | mRNA | 24381800 | 24383071 | 24381800 | ID=MsG0280008025.01.T01;Parent=MsG0280008025.01;Name=MsG0280008025.01.T01;_AED=0.43;_eAED=0.43;_QI=0|-1|0|1|-1|1|1|0|423 |
| Chr2 | exon | 24381800 | 24383071 | 24381800 | ID=MsG0280008025.01.T01:exon:40567;Parent=MsG0280008025.01.T01 |
| Chr2 | CDS | 24381800 | 24383071 | 24381800 | ID=MsG0280008025.01.T01:cds;Parent=MsG0280008025.01.T01 |
| Gene Sequence |
| Protein sequence |
