AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0280008059.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280008059.01.T01 MTR_2g437240 67.204 372 80 4 1 337 1 365 1.20e-168 476
MsG0280008059.01.T01 MTR_2g437200 64.267 375 90 4 1 339 1 367 3.70e-161 456
MsG0280008059.01.T01 MTR_2g438020 68.661 351 74 2 24 339 57 406 3.46e-158 452
MsG0280008059.01.T01 MTR_2g437150 65.015 343 104 5 14 341 20 361 4.75e-151 431
MsG0280008059.01.T01 MTR_2g437170 65.663 332 103 5 18 339 29 359 2.72e-149 427
MsG0280008059.01.T01 MTR_2g437180 62.464 349 118 4 3 339 4 351 7.20e-148 422
MsG0280008059.01.T01 MTR_2g437960 66.776 304 98 2 38 339 53 355 3.76e-146 419
MsG0280008059.01.T01 MTR_2g437960 66.776 304 98 2 38 339 53 355 4.85e-146 419
MsG0280008059.01.T01 MTR_2g437100 63.202 356 111 5 3 339 10 364 9.45e-146 418
MsG0280008059.01.T01 MTR_2g437120 63.881 335 110 4 14 339 20 352 2.44e-142 409
MsG0280008059.01.T01 MTR_2g437990 63.554 332 111 4 14 337 20 349 5.74e-139 401
MsG0280008059.01.T01 MTR_2g438010 61.562 333 119 3 14 338 40 371 1.29e-138 400
MsG0280008059.01.T01 MTR_2g076320 62.462 333 116 4 14 338 20 351 6.33e-137 395
MsG0280008059.01.T01 MTR_2g437160 58.239 352 130 5 3 339 15 364 2.00e-135 392
MsG0280008059.01.T01 MTR_2g437130 61.199 317 116 2 22 338 30 339 8.92e-134 386
MsG0280008059.01.T01 MTR_2g437260 54.493 345 147 5 1 342 1 338 4.59e-126 367
MsG0280008059.01.T01 MTR_2g437940 56.156 333 110 4 14 339 20 323 1.20e-119 350
MsG0280008059.01.T01 MTR_2g437080 53.292 319 142 3 21 337 24 337 1.93e-115 340
MsG0280008059.01.T01 MTR_2g437060 52.830 318 143 4 22 337 40 352 8.03e-111 328
MsG0280008059.01.T01 MTR_2g436440 52.050 317 145 3 25 339 34 345 2.55e-110 327
MsG0280008059.01.T01 MTR_2g437020 51.393 323 148 4 19 337 21 338 5.37e-110 326
MsG0280008059.01.T01 MTR_2g437030 52.381 315 143 3 25 337 114 423 9.25e-107 320
MsG0280008059.01.T01 MTR_2g437040 50.313 320 152 4 22 339 25 339 1.08e-104 312
MsG0280008059.01.T01 MTR_2g436400 50.649 308 146 3 32 337 41 344 2.41e-103 309
MsG0280008059.01.T01 MTR_4g119550 48.208 307 154 2 34 339 47 349 9.66e-102 305
MsG0280008059.01.T01 MTR_2g436460 48.387 310 155 2 31 339 40 345 2.21e-94 286
MsG0280008059.01.T01 MTR_4g120380 45.687 313 166 1 31 343 37 345 2.23e-89 273
MsG0280008059.01.T01 MTR_4g120380 45.687 313 166 1 31 343 37 345 1.79e-88 272
MsG0280008059.01.T01 MTR_4g119580 44.548 321 173 2 24 343 29 345 2.80e-84 260
MsG0280008059.01.T01 MTR_2g019810 41.908 346 176 7 1 339 1 328 2.71e-72 229
MsG0280008059.01.T01 MTR_2g019840 40.541 333 187 7 11 340 17 341 2.91e-72 229
MsG0280008059.01.T01 MTR_2g437160 63.571 140 51 0 200 339 134 273 6.71e-60 195
MsG0280008059.01.T01 MTR_2g437160 41.135 141 64 5 3 128 15 151 1.81e-17 82.4
MsG0280008059.01.T01 MTR_3g450500 30.864 324 214 3 24 341 24 343 7.20e-50 171
MsG0280008059.01.T01 MTR_4g007490 31.077 325 220 3 19 341 19 341 4.66e-45 158
MsG0280008059.01.T01 MTR_2g437090 54.331 127 58 0 213 339 1 127 8.64e-43 146
MsG0280008059.01.T01 MTR_4g119570 37.500 224 103 3 116 339 14 200 2.75e-42 147
MsG0280008059.01.T01 MTR_3g085240 44.131 213 94 6 1 209 21 212 2.21e-38 137
MsG0280008059.01.T01 MTR_3g085240 77.358 53 12 0 272 324 176 228 7.92e-19 85.1
MsG0280008059.01.T01 MTR_2g436370 45.000 160 82 4 32 189 40 195 2.82e-37 133
MsG0280008059.01.T01 MTR_8g081000 30.112 269 183 3 67 333 85 350 4.34e-32 124
MsG0280008059.01.T01 MTR_8g081000 30.112 269 183 3 67 333 85 350 5.34e-32 124
MsG0280008059.01.T01 MTR_8g081000 30.112 269 183 3 67 333 85 350 5.63e-32 124
MsG0280008059.01.T01 MTR_4g049400 47.651 149 65 3 1 136 2 150 9.25e-32 119
MsG0280008059.01.T01 MTR_8g080990 30.686 277 187 3 69 343 74 347 3.15e-30 119
MsG0280008059.01.T01 MTR_2g436380 43.434 99 53 1 213 311 1 96 6.96e-18 83.2
MsG0280008059.01.T01 MTR_3g092710 22.846 267 194 6 60 321 210 469 2.58e-11 65.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280008059.01.T01 AT5G07900 32.682 358 218 7 4 339 15 371 1.43e-53 181
MsG0280008059.01.T01 AT1G21150 35.017 297 190 2 40 334 57 352 7.45e-51 174
MsG0280008059.01.T01 AT1G21150 33.981 309 201 2 28 334 9 316 1.55e-50 172
MsG0280008059.01.T01 AT1G21150 35.017 297 190 2 40 334 121 416 4.63e-50 173
MsG0280008059.01.T01 AT1G61980 31.287 342 191 6 40 343 53 388 8.58e-41 148
MsG0280008059.01.T01 AT1G61980 31.287 342 191 6 40 343 53 388 8.58e-41 148
MsG0280008059.01.T01 AT1G61980 31.287 342 191 6 40 343 53 388 8.58e-41 148
MsG0280008059.01.T01 AT1G61970 30.058 346 196 7 37 343 50 388 4.19e-39 143
MsG0280008059.01.T01 AT1G61970 30.058 346 196 7 37 343 50 388 4.19e-39 143
MsG0280008059.01.T01 AT1G61970 30.058 346 196 7 37 343 50 388 4.19e-39 143
MsG0280008059.01.T01 AT1G61970 30.058 346 196 7 37 343 50 388 4.19e-39 143
MsG0280008059.01.T01 AT1G61970 30.058 346 196 7 37 343 50 388 4.19e-39 143
MsG0280008059.01.T01 AT1G61970 30.058 346 196 7 37 343 50 388 4.19e-39 143
MsG0280008059.01.T01 AT1G61970 30.058 346 196 7 37 343 50 388 4.19e-39 143
MsG0280008059.01.T01 AT1G61990 30.746 335 183 6 40 337 53 375 2.43e-38 141
MsG0280008059.01.T01 AT1G61990 30.746 335 183 6 40 337 53 375 2.43e-38 141
MsG0280008059.01.T01 AT1G62120 29.969 327 191 4 40 330 57 381 8.74e-38 140
MsG0280008059.01.T01 AT1G61960 28.302 371 192 8 37 336 50 417 3.29e-34 131
MsG0280008059.01.T01 AT5G64950 29.097 299 207 4 31 325 31 328 3.99e-34 129
MsG0280008059.01.T01 AT3G46950 32.302 291 172 8 11 285 20 301 1.98e-33 129
MsG0280008059.01.T01 AT1G62150 31.200 250 163 3 37 282 56 300 1.76e-28 115
MsG0280008059.01.T01 AT1G62110 31.579 247 160 3 40 282 53 294 9.65e-28 113
MsG0280008059.01.T01 AT1G62085 30.986 284 178 5 40 313 56 331 7.08e-27 110
MsG0280008059.01.T01 AT1G62085 30.986 284 178 5 40 313 56 331 7.08e-27 110
MsG0280008059.01.T01 AT1G62010 27.365 296 171 6 72 330 71 359 2.97e-25 105
MsG0280008059.01.T01 AT5G23930 25.000 388 199 8 25 330 31 408 1.09e-22 99.0
MsG0280008059.01.T01 AT1G56380 24.286 350 184 11 42 332 30 357 4.07e-15 76.3
MsG0280008059.01.T01 AT1G56380 24.286 350 184 11 42 332 19 346 4.32e-15 76.3

Find 54 sgRNAs with CRISPR-Local

Find 80 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATCAATTTGATGACTGATTT+TGG 0.089088 2:-24893098 MsG0280008059.01.T01:CDS
GATCCTTCAATAGCTTCTTT+TGG 0.194910 2:-24892972 MsG0280008059.01.T01:CDS
ATTGAACCAAACATTAAATT+AGG 0.196776 2:+24892834 None:intergenic
AAGCTACTTTGTAAAATTCT+AGG 0.214273 2:+24893254 None:intergenic
TTGGATGAAGTTAAGAGTTT+AGG 0.241873 2:-24892999 MsG0280008059.01.T01:CDS
AGAAAACATTTGTGGTAGTT+TGG 0.267676 2:+24892746 None:intergenic
AAGTCAAAGCCATCTATATT+TGG 0.268618 2:-24893044 MsG0280008059.01.T01:CDS
TGGATGAAGTTAAGAGTTTA+GGG 0.277888 2:-24892998 MsG0280008059.01.T01:CDS
AGACCAACCCCATTTCTTAA+AGG 0.303126 2:+24892890 None:intergenic
AAAGGATTTGATTAAGTCAT+TGG 0.323129 2:-24893018 MsG0280008059.01.T01:CDS
AAGAAGTTGATAACTGAATC+TGG 0.340602 2:+24893437 None:intergenic
GCAGAGAATCGTATCCTTGC+TGG 0.340656 2:+24893181 None:intergenic
TCCTTTGAACCAAATATAGA+TGG 0.343999 2:+24893035 None:intergenic
AGTCAACCTAATTTAATGTT+TGG 0.349300 2:-24892840 MsG0280008059.01.T01:CDS
AAGTTGATGCCTTTAAGAAA+TGG 0.366199 2:-24892899 MsG0280008059.01.T01:CDS
AGTTGATGCCTTTAAGAAAT+GGG 0.371481 2:-24892898 MsG0280008059.01.T01:CDS
TCCTACCGCATCGACAAATT+CGG 0.385020 2:-24893521 MsG0280008059.01.T01:CDS
TCAATTGGGTTGGAATTCCT+TGG 0.395228 2:-24892775 MsG0280008059.01.T01:CDS
ATCAGATGAAGAAGCACCTT+TGG 0.404344 2:+24893301 None:intergenic
TTTCTTATAGTTTGGAGAAA+AGG 0.411421 2:-24892728 MsG0280008059.01.T01:CDS
GCCATCTATATTTGGTTCAA+AGG 0.418741 2:-24893036 MsG0280008059.01.T01:CDS
TTCAATTGATAAGATTGATT+TGG 0.420866 2:-24892817 MsG0280008059.01.T01:CDS
TGAGGAATTTGAGAGAAAAT+AGG 0.422691 2:+24893579 None:intergenic
GAAGCTTTGAGTGCGCATTC+CGG 0.473335 2:+24893491 None:intergenic
ATGCGGTAGGATACGATGAA+TGG 0.475243 2:+24893533 None:intergenic
AAACTATAAGAAAACATTTG+TGG 0.477251 2:+24892738 None:intergenic
AATTGCATCACTGAGGCCCT+TGG 0.480859 2:+24892699 None:intergenic
AGCTACTTTGTAAAATTCTA+GGG 0.484426 2:+24893255 None:intergenic
ATTGCATCACTGAGGCCCTT+GGG 0.486645 2:+24892700 None:intergenic
TTTGGGTCAATCAATTGGGT+TGG 0.506924 2:-24892785 MsG0280008059.01.T01:CDS
TGGTAGTTTGGTAAGTTCCA+AGG 0.517446 2:+24892758 None:intergenic
ACCCCAAAAGAAGCTATTGA+AGG 0.524754 2:+24892969 None:intergenic
TGCGGTAGGATACGATGAAT+GGG 0.527882 2:+24893534 None:intergenic
ATTAGCCACAATAAGACGAT+AGG 0.549451 2:+24893121 None:intergenic
TGACTTAAGCAAACTAGCAA+TGG 0.563975 2:+24893061 None:intergenic
GTTGATGCCTTTAAGAAATG+GGG 0.573670 2:-24892897 MsG0280008059.01.T01:CDS
TCCGAATTTGTCGATGCGGT+AGG 0.598379 2:+24893520 None:intergenic
ATGCCTTTAAGAAATGGGGT+TGG 0.598819 2:-24892893 MsG0280008059.01.T01:CDS
TTAGCCACAATAAGACGATA+GGG 0.603677 2:+24893122 None:intergenic
TAATCCCTATCGTCTTATTG+TGG 0.617258 2:-24893126 MsG0280008059.01.T01:CDS
TGGAGAAAAGGATCATCCCA+AGG 0.625434 2:-24892716 MsG0280008059.01.T01:CDS
GTTTGAAGTGGTGGTCGTAG+TGG 0.628930 2:+24893556 None:intergenic
AATTTGAGAGAAAATAGGAA+AGG 0.640380 2:+24893584 None:intergenic
AAGTGGTGGTCGTAGTGGTG+AGG 0.643165 2:+24893561 None:intergenic
GATGAATGGGTTTGAAGTGG+TGG 0.643692 2:+24893547 None:intergenic
TACGATGAATGGGTTTGAAG+TGG 0.656177 2:+24893544 None:intergenic
TAGGTTCTTGAAATCCAGCA+AGG 0.657633 2:-24893195 MsG0280008059.01.T01:CDS
GATGTTGTGTATGTCTGAGT+CGG 0.659790 2:+24893397 None:intergenic
GTATCGCAGGAAAGAAGCCA+TGG 0.666550 2:+24893362 None:intergenic
CGACAAATTCGGATTCACAC+CGG 0.677088 2:-24893510 MsG0280008059.01.T01:CDS
ACATCATCAAAATCGAACCA+TGG 0.682141 2:-24893379 MsG0280008059.01.T01:CDS
TGAATCCGAATTTGTCGATG+CGG 0.690799 2:+24893516 None:intergenic
GGAGAAAAGGATCATCCCAA+GGG 0.698071 2:-24892715 MsG0280008059.01.T01:CDS
CAAAAGAAATTGCATCACTG+AGG 0.724880 2:+24892692 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAATATTGTTGAAAAATTT+AGG - Chr2:24893419-24893438 MsG0280008059.01.T01:CDS 10.0%
!! TACTTAATAATTGAAAAAGA+GGG + Chr2:24893069-24893088 None:intergenic 15.0%
!! AAACTATAAGAAAACATTTG+TGG + Chr2:24893547-24893566 None:intergenic 20.0%
!! ATAGAAAAAACTGAAACTTT+GGG + Chr2:24892961-24892980 None:intergenic 20.0%
!! ATTGAACCAAACATTAAATT+AGG + Chr2:24893451-24893470 None:intergenic 20.0%
!! CTACTTAATAATTGAAAAAG+AGG + Chr2:24893070-24893089 None:intergenic 20.0%
!! TTCAATTGATAAGATTGATT+TGG - Chr2:24893465-24893484 MsG0280008059.01.T01:CDS 20.0%
!!! ACAAATGTTTTCTTATAGTT+TGG - Chr2:24893546-24893565 MsG0280008059.01.T01:CDS 20.0%
!!! CTCTTTTTCAATTATTAAGT+AGG - Chr2:24893068-24893087 MsG0280008059.01.T01:CDS 20.0%
!!! GGTTTTGAAATAAAGTTTTT+TGG + Chr2:24892816-24892835 None:intergenic 20.0%
!!! TTTTTTACTCAAACATTTCT+TGG + Chr2:24893350-24893369 None:intergenic 20.0%
! AAAGGATTTGATTAAGTCAT+TGG - Chr2:24893264-24893283 MsG0280008059.01.T01:CDS 25.0%
! AATGTTTGAGTAAAAAACGT+TGG - Chr2:24893353-24893372 MsG0280008059.01.T01:CDS 25.0%
! AATTTGAGAGAAAATAGGAA+AGG + Chr2:24892701-24892720 None:intergenic 25.0%
! AGTCAACCTAATTTAATGTT+TGG - Chr2:24893442-24893461 MsG0280008059.01.T01:CDS 25.0%
! ATCAACTTCTTCAAAAATCA+CGG - Chr2:24892857-24892876 MsG0280008059.01.T01:CDS 25.0%
! ATGTTTGAGTAAAAAACGTT+GGG - Chr2:24893354-24893373 MsG0280008059.01.T01:CDS 25.0%
! GATAGAAAAAACTGAAACTT+TGG + Chr2:24892962-24892981 None:intergenic 25.0%
! TTTCTTATAGTTTGGAGAAA+AGG - Chr2:24893554-24893573 MsG0280008059.01.T01:CDS 25.0%
!! AAGCTACTTTGTAAAATTCT+AGG + Chr2:24893031-24893050 None:intergenic 25.0%
!! AGCTACTTTGTAAAATTCTA+GGG + Chr2:24893030-24893049 None:intergenic 25.0%
!! ATGCAATTTCTTTTGATGAA+AGG - Chr2:24893598-24893617 MsG0280008059.01.T01:CDS 25.0%
!! TAGAATTTTACAAAGTAGCT+TGG - Chr2:24893030-24893049 MsG0280008059.01.T01:CDS 25.0%
!!! ATCAATTTGATGACTGATTT+TGG - Chr2:24893184-24893203 MsG0280008059.01.T01:CDS 25.0%
!!! TTTCAGTTTTTTCTATCCAA+AGG - Chr2:24892965-24892984 MsG0280008059.01.T01:CDS 25.0%
AAGTCAAAGCCATCTATATT+TGG - Chr2:24893238-24893257 MsG0280008059.01.T01:CDS 30.0%
AGAAAACATTTGTGGTAGTT+TGG + Chr2:24893539-24893558 None:intergenic 30.0%
TCCTTTGAACCAAATATAGA+TGG + Chr2:24893250-24893269 None:intergenic 30.0%
TGAGGAATTTGAGAGAAAAT+AGG + Chr2:24892706-24892725 None:intergenic 30.0%
TGGATGAAGTTAAGAGTTTA+GGG - Chr2:24893284-24893303 MsG0280008059.01.T01:CDS 30.0%
TTGGATGAAGTTAAGAGTTT+AGG - Chr2:24893283-24893302 MsG0280008059.01.T01:CDS 30.0%
! AGTTGATGCCTTTAAGAAAT+GGG - Chr2:24893384-24893403 MsG0280008059.01.T01:CDS 30.0%
! ATCCTTCAATAGCTTCTTTT+GGG - Chr2:24893311-24893330 MsG0280008059.01.T01:CDS 30.0%
!! AAGAAGTTGATAACTGAATC+TGG + Chr2:24892848-24892867 None:intergenic 30.0%
!! AAGTTGATGCCTTTAAGAAA+TGG - Chr2:24893383-24893402 MsG0280008059.01.T01:CDS 30.0%
!!! AGTTTTTGGGTCAATCAATT+GGG - Chr2:24893493-24893512 MsG0280008059.01.T01:CDS 30.0%
!!! TGATTTGGTGATGAGTTTTT+GGG - Chr2:24893480-24893499 MsG0280008059.01.T01:CDS 30.0%
!!! TTGATTTGGTGATGAGTTTT+TGG - Chr2:24893479-24893498 MsG0280008059.01.T01:CDS 30.0%
ACATCATCAAAATCGAACCA+TGG - Chr2:24892903-24892922 MsG0280008059.01.T01:CDS 35.0%
ATTAGCCACAATAAGACGAT+AGG + Chr2:24893164-24893183 None:intergenic 35.0%
CAAAAGAAATTGCATCACTG+AGG + Chr2:24893593-24893612 None:intergenic 35.0%
TGACTTAAGCAAACTAGCAA+TGG + Chr2:24893224-24893243 None:intergenic 35.0%
TTAGCCACAATAAGACGATA+GGG + Chr2:24893163-24893182 None:intergenic 35.0%
! GATCCTTCAATAGCTTCTTT+TGG - Chr2:24893310-24893329 MsG0280008059.01.T01:CDS 35.0%
! GCCATCTATATTTGGTTCAA+AGG - Chr2:24893246-24893265 MsG0280008059.01.T01:CDS 35.0%
! GTTGATGCCTTTAAGAAATG+GGG - Chr2:24893385-24893404 MsG0280008059.01.T01:CDS 35.0%
! TAATCCCTATCGTCTTATTG+TGG - Chr2:24893156-24893175 MsG0280008059.01.T01:CDS 35.0%
! TCCTTCAATAGCTTCTTTTG+GGG - Chr2:24893312-24893331 MsG0280008059.01.T01:CDS 35.0%
!!! AACTGAATCTGGTTTTTGTG+AGG + Chr2:24892837-24892856 None:intergenic 35.0%
!!! GAGTTTTTGGGTCAATCAAT+TGG - Chr2:24893492-24893511 MsG0280008059.01.T01:CDS 35.0%
ACCCCAAAAGAAGCTATTGA+AGG + Chr2:24893316-24893335 None:intergenic 40.0%
AGACCAACCCCATTTCTTAA+AGG + Chr2:24893395-24893414 None:intergenic 40.0%
GATGTTGTGTATGTCTGAGT+CGG + Chr2:24892888-24892907 None:intergenic 40.0%
TAGGTTCTTGAAATCCAGCA+AGG - Chr2:24893087-24893106 MsG0280008059.01.T01:CDS 40.0%
TGAATCCGAATTTGTCGATG+CGG + Chr2:24892769-24892788 None:intergenic 40.0%
TGGTAGTTTGGTAAGTTCCA+AGG + Chr2:24893527-24893546 None:intergenic 40.0%
TTTGGGTCAATCAATTGGGT+TGG - Chr2:24893497-24893516 MsG0280008059.01.T01:CDS 40.0%
! ATGCCTTTAAGAAATGGGGT+TGG - Chr2:24893389-24893408 MsG0280008059.01.T01:CDS 40.0%
! TACGATGAATGGGTTTGAAG+TGG + Chr2:24892741-24892760 None:intergenic 40.0%
!! ACTTTGGGAGAATCGTTTTG+TGG + Chr2:24892946-24892965 None:intergenic 40.0%
!! ATCAGATGAAGAAGCACCTT+TGG + Chr2:24892984-24893003 None:intergenic 40.0%
!! CTTTGGGAGAATCGTTTTGT+GGG + Chr2:24892945-24892964 None:intergenic 40.0%
!! TCAATTGGGTTGGAATTCCT+TGG - Chr2:24893507-24893526 MsG0280008059.01.T01:CDS 40.0%
ATGCGGTAGGATACGATGAA+TGG + Chr2:24892752-24892771 None:intergenic 45.0%
CGACAAATTCGGATTCACAC+CGG - Chr2:24892772-24892791 MsG0280008059.01.T01:CDS 45.0%
GGAGAAAAGGATCATCCCAA+GGG - Chr2:24893567-24893586 MsG0280008059.01.T01:CDS 45.0%
TGCGGTAGGATACGATGAAT+GGG + Chr2:24892751-24892770 None:intergenic 45.0%
TGGAGAAAAGGATCATCCCA+AGG - Chr2:24893566-24893585 MsG0280008059.01.T01:CDS 45.0%
! GATGAATGGGTTTGAAGTGG+TGG + Chr2:24892738-24892757 None:intergenic 45.0%
! TCCTACCGCATCGACAAATT+CGG - Chr2:24892761-24892780 MsG0280008059.01.T01:CDS 45.0%
!! AATCGTTTTGTGGGTATCGC+AGG + Chr2:24892936-24892955 None:intergenic 45.0%
!!! AGCTTCTTTTGGGGTTGCTT+TGG - Chr2:24893321-24893340 MsG0280008059.01.T01:CDS 45.0%
AATTGCATCACTGAGGCCCT+TGG + Chr2:24893586-24893605 None:intergenic 50.0%
ATTGCATCACTGAGGCCCTT+GGG + Chr2:24893585-24893604 None:intergenic 50.0%
GCAGAGAATCGTATCCTTGC+TGG + Chr2:24893104-24893123 None:intergenic 50.0%
GTATCGCAGGAAAGAAGCCA+TGG + Chr2:24892923-24892942 None:intergenic 50.0%
TCCGAATTTGTCGATGCGGT+AGG + Chr2:24892765-24892784 None:intergenic 50.0%
! GTTTGAAGTGGTGGTCGTAG+TGG + Chr2:24892729-24892748 None:intergenic 50.0%
!! GAAGCTTTGAGTGCGCATTC+CGG + Chr2:24892794-24892813 None:intergenic 50.0%
AAGTGGTGGTCGTAGTGGTG+AGG + Chr2:24892724-24892743 None:intergenic 55.0%
Chromosome Type Strat End Strand Name
Chr2 gene 24892635 24893669 24892635 ID=MsG0280008059.01;Name=MsG0280008059.01
Chr2 mRNA 24892635 24893669 24892635 ID=MsG0280008059.01.T01;Parent=MsG0280008059.01;Name=MsG0280008059.01.T01;_AED=0.50;_eAED=0.50;_QI=0|-1|0|1|-1|1|1|0|344
Chr2 exon 24892635 24893669 24892635 ID=MsG0280008059.01.T01:exon:34857;Parent=MsG0280008059.01.T01
Chr2 CDS 24892635 24893669 24892635 ID=MsG0280008059.01.T01:cds;Parent=MsG0280008059.01.T01
Gene Sequence

>MsG0280008059.01.T01

ATGTTGAAAGCTTTTCTCTGCAAAAATGCATTTCGCATATCAACAACAACACTCTACAACGCACCTTTCCTATTTTCTCTCAAATTCCTCACCACTACGACCACCACTTCAAACCCATTCATCGTATCCTACCGCATCGACAAATTCGGATTCACACCGGAATGCGCACTCAAAGCTTCCAAAAAACTTTATTTCAAAACCTCACAAAAACCAGATTCAGTTATCAACTTCTTCAAAAATCACGGTTTCACCGACTCAGACATACACAACATCATCAAAATCGAACCATGGCTTCTTTCCTGCGATACCCACAAAACGATTCTCCCAAAGTTTCAGTTTTTTCTATCCAAAGGTGCTTCTTCATCTGATATTATTTCATTGTTAACTGCACACCCTAGAATTTTACAAAGTAGCTTGGAGAAACGAATAATCCCTCTTTTTCAATTATTAAGTAGGTTCTTGAAATCCAGCAAGGATACGATTCTCTGCTTAATTCGATATTCTGCTGCATTTACTATAAATAATCCCTATCGTCTTATTGTGGCTAATATCAATTTGATGACTGATTTTGGAGTTTCTGATAATGCCATTGCTAGTTTGCTTAAGTCAAAGCCATCTATATTTGGTTCAAAGGATTTGATTAAGTCATTGGATGAAGTTAAGAGTTTAGGGTTTGATCCTTCAATAGCTTCTTTTGGGGTTGCTTTGGCAGCCAAGAAATGTTTGAGTAAAAAACGTTGGGATGAGAAAGTTGATGCCTTTAAGAAATGGGGTTGGTCTGATGAAAATATTGTTGAAAAATTTAGGAGTCAACCTAATTTAATGTTTGGTTCAATTGATAAGATTGATTTGGTGATGAGTTTTTGGGTCAATCAATTGGGTTGGAATTCCTTGGAACTTACCAAACTACCACAAATGTTTTCTTATAGTTTGGAGAAAAGGATCATCCCAAGGGCCTCAGTGATGCAATTTCTTTTGATGAAAGGTTTGCGAAAAAAGAATGCAAAGCTTTGTTCAACCATTTTCTTATTCTGA
Protein sequence

>MsG0280008059.01.T01

MLKAFLCKNAFRISTTTLYNAPFLFSLKFLTTTTTTSNPFIVSYRIDKFGFTPECALKASKKLYFKTSQKPDSVINFFKNHGFTDSDIHNIIKIEPWLLSCDTHKTILPKFQFFLSKGASSSDIISLLTAHPRILQSSLEKRIIPLFQLLSRFLKSSKDTILCLIRYSAAFTINNPYRLIVANINLMTDFGVSDNAIASLLKSKPSIFGSKDLIKSLDEVKSLGFDPSIASFGVALAAKKCLSKKRWDEKVDAFKKWGWSDENIVEKFRSQPNLMFGSIDKIDLVMSFWVNQLGWNSLELTKLPQMFSYSLEKRIIPRASVMQFLLMKGLRKKNAKLCSTIFLF*