Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0280008385.01.T01 | KEH37561.1 | 93.973 | 365 | 10 | 5 | 7 | 368 | 1 | 356 | 0 | 689 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0280008385.01.T01 | A2XA73 | 35.176 | 398 | 198 | 12 | 12 | 368 | 17 | 395 | 1.01E-59 | 201 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0280008385.01.T01 | A0A072V7F0 | 93.973 | 365 | 10 | 5 | 7 | 368 | 1 | 356 | 0.0 | 689 |
Gene ID | Type | Classification |
---|---|---|
MsG0280008385.01.T01 | TF | GRF |
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0280008385.01.T01 | MTR_2g041430 | 93.973 | 365 | 10 | 5 | 7 | 368 | 1 | 356 | 0.0 | 689 |
MsG0280008385.01.T01 | MTR_2g041430 | 93.939 | 363 | 10 | 5 | 7 | 366 | 1 | 354 | 0.0 | 684 |
MsG0280008385.01.T01 | MTR_2g041430 | 93.939 | 363 | 10 | 5 | 7 | 366 | 1 | 354 | 0.0 | 684 |
MsG0280008385.01.T01 | MTR_4g125490 | 62.113 | 388 | 100 | 15 | 6 | 367 | 1 | 367 | 5.59e-142 | 410 |
MsG0280008385.01.T01 | MTR_8g020560 | 45.115 | 348 | 156 | 12 | 9 | 337 | 7 | 338 | 1.48e-68 | 219 |
MsG0280008385.01.T01 | MTR_0001s0490 | 39.660 | 353 | 142 | 12 | 13 | 351 | 25 | 320 | 4.57e-61 | 199 |
MsG0280008385.01.T01 | MTR_1g017490 | 57.391 | 115 | 49 | 0 | 11 | 125 | 9 | 123 | 3.56e-41 | 151 |
MsG0280008385.01.T01 | MTR_1g017490 | 57.391 | 115 | 49 | 0 | 11 | 125 | 142 | 256 | 6.69e-41 | 152 |
MsG0280008385.01.T01 | MTR_5g027030 | 60.177 | 113 | 29 | 2 | 13 | 125 | 16 | 112 | 1.70e-40 | 145 |
MsG0280008385.01.T01 | MTR_7g104050 | 54.198 | 131 | 45 | 4 | 10 | 131 | 68 | 192 | 2.86e-35 | 132 |
MsG0280008385.01.T01 | MTR_7g104050 | 54.198 | 131 | 45 | 4 | 10 | 131 | 68 | 192 | 3.28e-35 | 133 |
MsG0280008385.01.T01 | MTR_3g092330 | 48.246 | 114 | 37 | 3 | 13 | 126 | 113 | 204 | 1.98e-27 | 113 |
MsG0280008385.01.T01 | MTR_8g035910 | 43.697 | 119 | 45 | 3 | 9 | 125 | 45 | 143 | 2.13e-22 | 98.2 |
MsG0280008385.01.T01 | MTR_8g035910 | 46.377 | 69 | 37 | 0 | 81 | 149 | 297 | 365 | 2.97e-13 | 70.9 |
MsG0280008385.01.T01 | MTR_8g035640 | 64.103 | 39 | 14 | 0 | 81 | 119 | 51 | 89 | 1.47e-12 | 65.5 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0280008385.01.T01 | AT3G13960 | 71.681 | 113 | 28 | 2 | 13 | 125 | 16 | 124 | 2.44e-55 | 186 |
MsG0280008385.01.T01 | AT2G06200 | 64.167 | 120 | 36 | 2 | 11 | 123 | 4 | 123 | 2.47e-47 | 161 |
MsG0280008385.01.T01 | AT2G06200 | 61.600 | 125 | 41 | 2 | 6 | 123 | 38 | 162 | 2.85e-47 | 162 |
MsG0280008385.01.T01 | AT4G37740 | 58.120 | 117 | 41 | 4 | 11 | 126 | 162 | 271 | 5.68e-39 | 145 |
MsG0280008385.01.T01 | AT2G36400 | 56.198 | 121 | 50 | 2 | 14 | 133 | 77 | 195 | 1.38e-36 | 137 |
MsG0280008385.01.T01 | AT3G52910 | 55.172 | 116 | 44 | 4 | 14 | 125 | 83 | 194 | 1.22e-33 | 129 |
MsG0280008385.01.T01 | AT2G22840 | 53.719 | 121 | 48 | 4 | 6 | 125 | 126 | 239 | 2.61e-33 | 130 |
MsG0280008385.01.T01 | AT2G06200 | 92.157 | 51 | 2 | 1 | 75 | 123 | 1 | 51 | 2.64e-26 | 103 |
MsG0280008385.01.T01 | AT5G53660 | 49.123 | 114 | 37 | 3 | 12 | 125 | 58 | 150 | 6.79e-26 | 107 |
MsG0280008385.01.T01 | AT4G24150 | 41.007 | 139 | 53 | 3 | 14 | 125 | 150 | 286 | 1.05e-23 | 102 |
MsG0280008385.01.T01 | AT4G24150 | 44.444 | 117 | 55 | 2 | 14 | 125 | 112 | 223 | 1.78e-23 | 101 |
MsG0280008385.01.T01 | AT4G24150 | 44.444 | 117 | 55 | 2 | 14 | 125 | 150 | 261 | 2.56e-23 | 101 |
MsG0280008385.01.T01 | AT2G45480 | 39.669 | 121 | 56 | 3 | 9 | 122 | 19 | 129 | 4.56e-18 | 84.3 |
MsG0280008385.01.T01 | AT2G45480 | 39.669 | 121 | 56 | 3 | 9 | 122 | 19 | 129 | 2.61e-17 | 83.2 |
MsG0280008385.01.T01 | AT2G45480 | 50.685 | 73 | 24 | 3 | 78 | 150 | 303 | 363 | 8.91e-13 | 69.7 |
MsG0280008385.01.T01 | AT2G45480 | 39.669 | 121 | 56 | 3 | 9 | 122 | 17 | 127 | 2.73e-17 | 83.2 |
MsG0280008385.01.T01 | AT2G45480 | 50.685 | 73 | 24 | 3 | 78 | 150 | 301 | 361 | 9.11e-13 | 69.7 |
Find 53 sgRNAs with CRISPR-Local
Find 105 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CATAAAGGATTGTTGCAAAT+TGG | 0.210488 | 2:+30490231 | None:intergenic |
TGCCATTGTGATGGAGTAAA+AGG | 0.243712 | 2:+30491371 | None:intergenic |
CTTTCACAATATTTAGAATC+TGG | 0.287060 | 2:+30490466 | None:intergenic |
ATTTACAAGTACATGGCTTC+TGG | 0.322552 | 2:-30491326 | MsG0280008385.01.T01:CDS |
GAGAGATCAATGGCTTGATT+TGG | 0.343166 | 2:-30489123 | MsG0280008385.01.T01:CDS |
CTCAGAATAACACTGATTAC+AGG | 0.358203 | 2:-30490111 | MsG0280008385.01.T01:intron |
TTTGATGAATGGCCACATAA+AGG | 0.368324 | 2:-30489146 | MsG0280008385.01.T01:CDS |
AACTATCTGCAAATGGGTTT+AGG | 0.375973 | 2:-30490565 | MsG0280008385.01.T01:CDS |
GCATTCTTCAAAGAACCTTC+TGG | 0.390445 | 2:-30489389 | MsG0280008385.01.T01:CDS |
ATTAATAATGCTTCATCACT+TGG | 0.397780 | 2:-30490364 | MsG0280008385.01.T01:CDS |
TCAACTTTGTCATCTGGTAT+TGG | 0.398620 | 2:-30490187 | MsG0280008385.01.T01:CDS |
GAAGAACAGATGGAAAGAAA+TGG | 0.403362 | 2:-30490510 | MsG0280008385.01.T01:CDS |
TTGATGAATGGCCACATAAA+GGG | 0.413091 | 2:-30489145 | MsG0280008385.01.T01:CDS |
GAAGAATTAGTTAATGATGC+AGG | 0.421290 | 2:+30490316 | None:intergenic |
TTCATCGCTTCTTTGATGAA+TGG | 0.422547 | 2:-30489157 | MsG0280008385.01.T01:CDS |
TCAAGGTCAACTTTGTCATC+TGG | 0.430096 | 2:-30490193 | MsG0280008385.01.T01:CDS |
TGTATCCTCATACAACTTCA+AGG | 0.438634 | 2:-30490210 | MsG0280008385.01.T01:CDS |
AAGCTTCTCTGCTTCATCAA+TGG | 0.443492 | 2:-30489351 | MsG0280008385.01.T01:CDS |
CTTCTACATCTACCTGGCTC+TGG | 0.445022 | 2:+30490529 | None:intergenic |
TGGATGGAACTATCTGCAAA+TGG | 0.447963 | 2:-30490572 | MsG0280008385.01.T01:CDS |
TCGATTTCGATTCCATCCTC+TGG | 0.461357 | 2:-30489074 | MsG0280008385.01.T01:CDS |
CTTCCACAGGCTTTCTTGAA+CGG | 0.472599 | 2:+30490422 | None:intergenic |
TATCCTCAAAATTCTTGCTA+TGG | 0.474491 | 2:-30490256 | MsG0280008385.01.T01:CDS |
CATTGATCTCTCCCTTTATG+TGG | 0.488068 | 2:+30489134 | None:intergenic |
GTTGACCTTGAAGTTGTATG+AGG | 0.489086 | 2:+30490205 | None:intergenic |
AAAAGGAACAGGTATGTGTA+TGG | 0.489899 | 2:-30489437 | MsG0280008385.01.T01:intron |
CAGTGTTGGTGTTGTTGAGT+AGG | 0.494839 | 2:+30491227 | None:intergenic |
AGTTGTATGAGGATACATAA+AGG | 0.504350 | 2:+30490216 | None:intergenic |
GTATTTCTAGAAGTGAAAGT+TGG | 0.508645 | 2:+30489041 | None:intergenic |
GGATGGAACTATCTGCAAAT+GGG | 0.512539 | 2:-30490571 | MsG0280008385.01.T01:CDS |
CATCAATGGAACATGATCCT+TGG | 0.521187 | 2:-30489337 | MsG0280008385.01.T01:CDS |
AGCTCTTATTTACAAGTACA+TGG | 0.521532 | 2:-30491333 | MsG0280008385.01.T01:CDS |
CAAAGAAGTAGAAGATGATG+AGG | 0.529690 | 2:+30489286 | None:intergenic |
CACATAAAGGGAGAGATCAA+TGG | 0.535742 | 2:-30489133 | MsG0280008385.01.T01:CDS |
GTAAGTGGTGTTAGTTGCCA+AGG | 0.556427 | 2:+30489320 | None:intergenic |
CTATGAAAGTTCAATTACCA+TGG | 0.563963 | 2:+30489018 | None:intergenic |
GGTAGATGTAGAAGAACAGA+TGG | 0.565829 | 2:-30490520 | MsG0280008385.01.T01:CDS |
TCAAGTTCTTGCCATTGTGA+TGG | 0.567945 | 2:+30491362 | None:intergenic |
AAGAATTAGTTAATGATGCA+GGG | 0.570085 | 2:+30490317 | None:intergenic |
GAGGAAGAACTCATAGTAAG+TGG | 0.573735 | 2:+30489305 | None:intergenic |
TCTGTTCTTCTACATCTACC+TGG | 0.588963 | 2:+30490523 | None:intergenic |
GCTGCTTTGAGTGTTCACTA+AGG | 0.590411 | 2:+30489207 | None:intergenic |
TGTGAAAGACACATGCATAG+AGG | 0.590712 | 2:-30490451 | MsG0280008385.01.T01:CDS |
AGAGTTGCTATCAAGAAACA+AGG | 0.594941 | 2:+30490138 | None:intergenic |
GGAAAATCATGACCAGAGGA+TGG | 0.595251 | 2:+30489062 | None:intergenic |
TTCATAGTACTGCTACCAGA+AGG | 0.597595 | 2:+30489374 | None:intergenic |
TTCACTTCTAGAAATACCCA+TGG | 0.600872 | 2:-30489035 | MsG0280008385.01.T01:CDS |
TATGAAAGTTCAATTACCAT+GGG | 0.607834 | 2:+30489019 | None:intergenic |
AGAGAAAGGACTTACAGTGT+TGG | 0.629687 | 2:+30491213 | None:intergenic |
AATCGAAATCGATAATTGAG+TGG | 0.635985 | 2:+30489085 | None:intergenic |
AAACCGTTCAAGAAAGCCTG+TGG | 0.641388 | 2:-30490425 | MsG0280008385.01.T01:CDS |
AGTTGGAAAATCATGACCAG+AGG | 0.663324 | 2:+30489058 | None:intergenic |
GAGTTGCTATCAAGAAACAA+GGG | 0.701728 | 2:+30490139 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAAAAAAAAAGAGATCAAAA+TGG | - | Chr2:30490881-30490900 | MsG0280008385.01.T01:intron | 15.0% |
!! | TATAGAGATAATTTAGTTAA+AGG | - | Chr2:30489769-30489788 | MsG0280008385.01.T01:intron | 15.0% |
!!! | TTATTTTGATTTTTTTCAGT+TGG | - | Chr2:30489843-30489862 | MsG0280008385.01.T01:intron | 15.0% |
!! | AAAAAATCAAAATAACCCTT+TGG | + | Chr2:30489838-30489857 | None:intergenic | 20.0% |
!! | GAAATTACAAAAAGAATCAA+CGG | + | Chr2:30490799-30490818 | None:intergenic | 20.0% |
!! | GAAGATGTATATTATATCAA+AGG | + | Chr2:30489560-30489579 | None:intergenic | 20.0% |
!! | GATACATTCAAAGAATATAA+TGG | - | Chr2:30490819-30490838 | MsG0280008385.01.T01:intron | 20.0% |
!!! | CTATACATTCATAATCTTTT+AGG | + | Chr2:30489754-30489773 | None:intergenic | 20.0% |
!!! | TATATTATATCAAAGGTGTT+AGG | + | Chr2:30489553-30489572 | None:intergenic | 20.0% |
!!! | TTTAAAGCAAATTTAGAAAG+TGG | - | Chr2:30489431-30489450 | MsG0280008385.01.T01:intron | 20.0% |
!!! | TTTTGATAAATAGTCGTTTT+TGG | - | Chr2:30490386-30490405 | MsG0280008385.01.T01:CDS | 20.0% |
!!! | TTTTTTGTTAGTTAGTTTGT+TGG | - | Chr2:30490502-30490521 | MsG0280008385.01.T01:CDS | 20.0% |
! | AAGAATTAGTTAATGATGCA+GGG | + | Chr2:30490121-30490140 | None:intergenic | 25.0% |
! | ACATATGAATATAGAGAGAA+AGG | + | Chr2:30489239-30489258 | None:intergenic | 25.0% |
! | ATTAATAATGCTTCATCACT+TGG | - | Chr2:30490071-30490090 | MsG0280008385.01.T01:intron | 25.0% |
! | TTTGAATTACTAACAAAGAC+AGG | - | Chr2:30490533-30490552 | MsG0280008385.01.T01:CDS | 25.0% |
!! | ATAGTGTTTGAACTTTGTTT+CGG | - | Chr2:30490361-30490380 | MsG0280008385.01.T01:CDS | 25.0% |
!! | CTTCAAGTAAATAGTCATTT+TGG | - | Chr2:30490676-30490695 | MsG0280008385.01.T01:intron | 25.0% |
!! | CTTTCACAATATTTAGAATC+TGG | + | Chr2:30489972-30489991 | None:intergenic | 25.0% |
!! | GTTTTCTTCCTTTGTAAAAA+AGG | - | Chr2:30490981-30491000 | MsG0280008385.01.T01:intron | 25.0% |
!!! | AAGAATTTTGAGGATAGTTT+TGG | + | Chr2:30490175-30490194 | None:intergenic | 25.0% |
!!! | TTTGATTTTTTTCAGTTGGA+TGG | - | Chr2:30489847-30489866 | MsG0280008385.01.T01:intron | 25.0% |
!!! | TTTGGAGTAAATAGTCATTT+TGG | - | Chr2:30490404-30490423 | MsG0280008385.01.T01:CDS | 25.0% |
AATCGAAATCGATAATTGAG+TGG | + | Chr2:30491353-30491372 | None:intergenic | 30.0% | |
AGTTGTATGAGGATACATAA+AGG | + | Chr2:30490222-30490241 | None:intergenic | 30.0% | |
CACACATTAAGAGATCAAAA+TGG | - | Chr2:30490847-30490866 | MsG0280008385.01.T01:intron | 30.0% | |
CATAAAGGATTGTTGCAAAT+TGG | + | Chr2:30490207-30490226 | None:intergenic | 30.0% | |
GAAACAAAGTTCAAACACTA+TGG | + | Chr2:30490362-30490381 | None:intergenic | 30.0% | |
GAAGAATTAGTTAATGATGC+AGG | + | Chr2:30490122-30490141 | None:intergenic | 30.0% | |
TACCATCAGAAAAAGCTATT+TGG | - | Chr2:30489159-30489178 | MsG0280008385.01.T01:CDS | 30.0% | |
TATCCTCAAAATTCTTGCTA+TGG | - | Chr2:30490179-30490198 | MsG0280008385.01.T01:CDS | 30.0% | |
TGACATTGTCTTACACATTT+CGG | - | Chr2:30490599-30490618 | MsG0280008385.01.T01:intron | 30.0% | |
TTAGCAAAGAAGCTAGTATT+TGG | + | Chr2:30489667-30489686 | None:intergenic | 30.0% | |
TTCCTTTGTAAAAAAGGAAC+AGG | - | Chr2:30490987-30491006 | MsG0280008385.01.T01:intron | 30.0% | |
! | AGCTCTTATTTACAAGTACA+TGG | - | Chr2:30489102-30489121 | MsG0280008385.01.T01:CDS | 30.0% |
! | GAATTGTGATTGATTCTCTT+TGG | - | Chr2:30490953-30490972 | MsG0280008385.01.T01:intron | 30.0% |
! | TTTTGATCTCTTAATGTGTG+AGG | + | Chr2:30490847-30490866 | None:intergenic | 30.0% |
!! | ATCCAAATAGCTTTTTCTGA+TGG | + | Chr2:30489164-30489183 | None:intergenic | 30.0% |
!! | GTATTTCTAGAAGTGAAAGT+TGG | + | Chr2:30491397-30491416 | None:intergenic | 30.0% |
!! | GTATTTTTGTGTGTTGCAAA+CGG | + | Chr2:30489599-30489618 | None:intergenic | 30.0% |
!!! | TACCTGTTCCTTTTTTACAA+AGG | + | Chr2:30490992-30491011 | None:intergenic | 30.0% |
AAAAGGAACAGGTATGTGTA+TGG | - | Chr2:30490998-30491017 | MsG0280008385.01.T01:intron | 35.0% | |
AGAGTTGCTATCAAGAAACA+AGG | + | Chr2:30490300-30490319 | None:intergenic | 35.0% | |
ATATGAGTCTCTTTGACCAA+AGG | - | Chr2:30489819-30489838 | MsG0280008385.01.T01:intron | 35.0% | |
ATGGTAAAAAGAAGATCAGG+TGG | + | Chr2:30489145-30489164 | None:intergenic | 35.0% | |
ATTTACAAGTACATGGCTTC+TGG | - | Chr2:30489109-30489128 | MsG0280008385.01.T01:CDS | 35.0% | |
CAAAGAAGTAGAAGATGATG+AGG | + | Chr2:30491152-30491171 | None:intergenic | 35.0% | |
CTGATGGTAAAAAGAAGATC+AGG | + | Chr2:30489148-30489167 | None:intergenic | 35.0% | |
GAAGAACAGATGGAAAGAAA+TGG | - | Chr2:30489925-30489944 | MsG0280008385.01.T01:intron | 35.0% | |
GAGTTGCTATCAAGAAACAA+GGG | + | Chr2:30490299-30490318 | None:intergenic | 35.0% | |
GGAAAAAGTCTTGAAGAAAG+AGG | + | Chr2:30489190-30489209 | None:intergenic | 35.0% | |
TATACATCTTCCTCTGTGTT+TGG | - | Chr2:30489569-30489588 | MsG0280008385.01.T01:intron | 35.0% | |
TATGAGTCTCTTTGACCAAA+GGG | - | Chr2:30489820-30489839 | MsG0280008385.01.T01:intron | 35.0% | |
TCAACTTTGTCATCTGGTAT+TGG | - | Chr2:30490248-30490267 | MsG0280008385.01.T01:CDS | 35.0% | |
TGCAACACACAAAAATACGT+TGG | - | Chr2:30489601-30489620 | MsG0280008385.01.T01:intron | 35.0% | |
TGTATCCTCATACAACTTCA+AGG | - | Chr2:30490225-30490244 | MsG0280008385.01.T01:CDS | 35.0% | |
TGTGTATGGACAAAAAGAAG+AGG | - | Chr2:30491012-30491031 | MsG0280008385.01.T01:intron | 35.0% | |
TTCATCGCTTCTTTGATGAA+TGG | - | Chr2:30491278-30491297 | MsG0280008385.01.T01:CDS | 35.0% | |
TTGATGAATGGCCACATAAA+GGG | - | Chr2:30491290-30491309 | MsG0280008385.01.T01:CDS | 35.0% | |
TTTGATGAATGGCCACATAA+AGG | - | Chr2:30491289-30491308 | MsG0280008385.01.T01:CDS | 35.0% | |
! | AACTATCTGCAAATGGGTTT+AGG | - | Chr2:30489870-30489889 | MsG0280008385.01.T01:intron | 35.0% |
! | CTCAGAATAACACTGATTAC+AGG | - | Chr2:30490324-30490343 | MsG0280008385.01.T01:CDS | 35.0% |
! | GAACCATAGCAAGAATTTTG+AGG | + | Chr2:30490185-30490204 | None:intergenic | 35.0% |
! | TCGGAAGTTAGTTTGGTAAT+CGG | - | Chr2:30490715-30490734 | MsG0280008385.01.T01:intron | 35.0% |
! | TGGTTTGTAGATGTGTAACT+CGG | - | Chr2:30490696-30490715 | MsG0280008385.01.T01:intron | 35.0% |
! | TTCACTTCTAGAAATACCCA+TGG | - | Chr2:30491400-30491419 | MsG0280008385.01.T01:CDS | 35.0% |
! | TTCCTTTTACTCCATCACAA+TGG | - | Chr2:30489062-30489081 | MsG0280008385.01.T01:CDS | 35.0% |
!! | TAATGATGCAGGGCTATTTT+TGG | + | Chr2:30490111-30490130 | None:intergenic | 35.0% |
!!! | GTTGTTTTTACAACTTCCAC+AGG | + | Chr2:30490029-30490048 | None:intergenic | 35.0% |
AAACGGATAACCAAACACAG+AGG | + | Chr2:30489582-30489601 | None:intergenic | 40.0% | |
AAGCTTCTCTGCTTCATCAA+TGG | - | Chr2:30491084-30491103 | MsG0280008385.01.T01:intron | 40.0% | |
AGAAAAATAGATCCAGAGCC+AGG | - | Chr2:30489894-30489913 | MsG0280008385.01.T01:intron | 40.0% | |
AGAGAAAGGACTTACAGTGT+TGG | + | Chr2:30489225-30489244 | None:intergenic | 40.0% | |
AGTTGGAAAATCATGACCAG+AGG | + | Chr2:30491380-30491399 | None:intergenic | 40.0% | |
CACATAAAGGGAGAGATCAA+TGG | - | Chr2:30491302-30491321 | MsG0280008385.01.T01:CDS | 40.0% | |
CATCAATGGAACATGATCCT+TGG | - | Chr2:30491098-30491117 | MsG0280008385.01.T01:intron | 40.0% | |
CATTGATCTCTCCCTTTATG+TGG | + | Chr2:30491304-30491323 | None:intergenic | 40.0% | |
GAGAGATCAATGGCTTGATT+TGG | - | Chr2:30491312-30491331 | MsG0280008385.01.T01:CDS | 40.0% | |
GAGGAAGAACTCATAGTAAG+TGG | + | Chr2:30491133-30491152 | None:intergenic | 40.0% | |
GCATTCTTCAAAGAACCTTC+TGG | - | Chr2:30491046-30491065 | MsG0280008385.01.T01:intron | 40.0% | |
GCTTCACTGCAAAAATGACA+TGG | + | Chr2:30490452-30490471 | None:intergenic | 40.0% | |
GGATGGAACTATCTGCAAAT+GGG | - | Chr2:30489864-30489883 | MsG0280008385.01.T01:intron | 40.0% | |
GGTAGATGTAGAAGAACAGA+TGG | - | Chr2:30489915-30489934 | MsG0280008385.01.T01:intron | 40.0% | |
GTGTAACTCGGAAGTTAGTT+TGG | - | Chr2:30490708-30490727 | MsG0280008385.01.T01:intron | 40.0% | |
GTTGACCTTGAAGTTGTATG+AGG | + | Chr2:30490233-30490252 | None:intergenic | 40.0% | |
GTTTGCAAAACGGTGTTTGA+TGG | + | Chr2:30489711-30489730 | None:intergenic | 40.0% | |
TCAAGGTCAACTTTGTCATC+TGG | - | Chr2:30490242-30490261 | MsG0280008385.01.T01:CDS | 40.0% | |
TCAAGTTCTTGCCATTGTGA+TGG | + | Chr2:30489076-30489095 | None:intergenic | 40.0% | |
TCTGTTCTTCTACATCTACC+TGG | + | Chr2:30489915-30489934 | None:intergenic | 40.0% | |
TGGATGGAACTATCTGCAAA+TGG | - | Chr2:30489863-30489882 | MsG0280008385.01.T01:intron | 40.0% | |
TGTGAAAGACACATGCATAG+AGG | - | Chr2:30489984-30490003 | MsG0280008385.01.T01:intron | 40.0% | |
TTCATAGTACTGCTACCAGA+AGG | + | Chr2:30491064-30491083 | None:intergenic | 40.0% | |
TTCGTACAGCGTTTGCAAAA+CGG | + | Chr2:30489721-30489740 | None:intergenic | 40.0% | |
! | AAGCGATGAACAGTTTTCTG+AGG | + | Chr2:30491268-30491287 | None:intergenic | 40.0% |
! | TACTAGCTTCTTTGCTAACG+TGG | - | Chr2:30489669-30489688 | MsG0280008385.01.T01:intron | 40.0% |
! | TGCCATTGTGATGGAGTAAA+AGG | + | Chr2:30489067-30489086 | None:intergenic | 40.0% |
!! | TATCAAAGGTGTTAGGTCAG+TGG | + | Chr2:30489546-30489565 | None:intergenic | 40.0% |
AAACCGTTCAAGAAAGCCTG+TGG | - | Chr2:30490010-30490029 | MsG0280008385.01.T01:intron | 45.0% | |
CTTCCACAGGCTTTCTTGAA+CGG | + | Chr2:30490016-30490035 | None:intergenic | 45.0% | |
GGAAAATCATGACCAGAGGA+TGG | + | Chr2:30491376-30491395 | None:intergenic | 45.0% | |
TCGATTTCGATTCCATCCTC+TGG | - | Chr2:30491361-30491380 | MsG0280008385.01.T01:CDS | 45.0% | |
! | GCTGCTTTGAGTGTTCACTA+AGG | + | Chr2:30491231-30491250 | None:intergenic | 45.0% |
! | GTAAGTGGTGTTAGTTGCCA+AGG | + | Chr2:30491118-30491137 | None:intergenic | 45.0% |
!! | CAGTGTTGGTGTTGTTGAGT+AGG | + | Chr2:30489211-30489230 | None:intergenic | 45.0% |
CTTCTACATCTACCTGGCTC+TGG | + | Chr2:30489909-30489928 | None:intergenic | 50.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
Chr2 | gene | 30489028 | 30491429 | 30489028 | ID=MsG0280008385.01;Name=MsG0280008385.01 |
Chr2 | mRNA | 30489028 | 30491429 | 30489028 | ID=MsG0280008385.01.T01;Parent=MsG0280008385.01;Name=MsG0280008385.01.T01;_AED=0.34;_eAED=0.35;_QI=0|0|0|1|1|1|3|0|368 |
Chr2 | exon | 30491228 | 30491429 | 30491228 | ID=MsG0280008385.01.T01:exon:5856;Parent=MsG0280008385.01.T01 |
Chr2 | exon | 30490112 | 30490595 | 30490112 | ID=MsG0280008385.01.T01:exon:5855;Parent=MsG0280008385.01.T01 |
Chr2 | exon | 30489028 | 30489448 | 30489028 | ID=MsG0280008385.01.T01:exon:5854;Parent=MsG0280008385.01.T01 |
Chr2 | CDS | 30491228 | 30491429 | 30491228 | ID=MsG0280008385.01.T01:cds;Parent=MsG0280008385.01.T01 |
Chr2 | CDS | 30490112 | 30490595 | 30490112 | ID=MsG0280008385.01.T01:cds;Parent=MsG0280008385.01.T01 |
Chr2 | CDS | 30489028 | 30489448 | 30489028 | ID=MsG0280008385.01.T01:cds;Parent=MsG0280008385.01.T01 |
Gene Sequence |
Protein sequence |