AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0280009332.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280009332.01.T01 MTR_2g032060 45.763 118 60 2 1 118 104 217 2.71e-30 110
MsG0280009332.01.T01 MTR_4g094430 45.763 118 60 2 1 118 104 217 2.83e-30 110
MsG0280009332.01.T01 MTR_4g007750 44.915 118 61 1 1 118 121 234 2.98e-28 105
MsG0280009332.01.T01 MTR_8g464430 83.929 56 8 1 65 119 1 56 1.32e-27 99.4
MsG0280009332.01.T01 MTR_3g040810 41.803 122 59 4 1 118 138 251 1.01e-25 100
MsG0280009332.01.T01 MTR_3g040520 41.803 122 59 4 1 118 140 253 5.59e-25 98.2
MsG0280009332.01.T01 MTR_8g464440 74.603 63 15 1 2 64 74 135 1.97e-24 90.9
MsG0280009332.01.T01 MTR_1g075610 41.964 112 61 1 7 118 132 239 3.85e-24 94.4
MsG0280009332.01.T01 MTR_8g080190 44.643 112 57 2 7 118 492 598 4.70e-24 95.9
MsG0280009332.01.T01 MTR_8g080190 44.643 112 57 2 7 118 492 598 4.78e-24 95.9
MsG0280009332.01.T01 MTR_3g085650 42.857 112 59 2 7 118 523 629 7.31e-24 95.5
MsG0280009332.01.T01 MTR_3g085650 42.857 112 59 2 7 118 523 629 7.36e-24 95.5
MsG0280009332.01.T01 MTR_3g085650 42.857 112 59 2 7 118 523 629 7.36e-24 95.5
MsG0280009332.01.T01 MTR_3g085650 42.857 112 59 2 7 118 523 629 7.40e-24 95.5
MsG0280009332.01.T01 MTR_4g103810 39.831 118 66 2 1 118 321 433 2.76e-23 93.6
MsG0280009332.01.T01 MTR_4g103810 39.831 118 66 2 1 118 211 323 4.42e-23 92.4
MsG0280009332.01.T01 MTR_6g013030 39.344 122 62 4 1 118 211 324 8.16e-23 92.4
MsG0280009332.01.T01 MTR_3g096960 45.045 111 58 2 1 109 126 235 9.07e-23 92.0
MsG0280009332.01.T01 MTR_7g011800 39.344 122 62 4 1 118 221 334 1.61e-22 91.7
MsG0280009332.01.T01 MTR_4g061320 42.373 118 58 4 2 117 144 253 4.39e-22 89.4
MsG0280009332.01.T01 MTR_8g461270 43.478 115 61 2 4 118 155 265 1.56e-21 87.8
MsG0280009332.01.T01 MTR_4g087620 40.541 111 56 4 2 110 159 261 2.13e-21 86.3
MsG0280009332.01.T01 MTR_8g098845 41.818 110 54 4 2 109 156 257 5.45e-21 86.7
MsG0280009332.01.T01 MTR_4g087620 40.909 110 55 4 2 109 159 260 7.14e-21 86.3
MsG0280009332.01.T01 MTR_5g010030 42.478 113 49 5 2 109 145 246 8.82e-21 85.9
MsG0280009332.01.T01 MTR_4g109090 37.815 119 68 3 1 118 206 319 1.12e-20 86.3
MsG0280009332.01.T01 MTR_4g109090 37.815 119 68 3 1 118 58 171 1.52e-20 85.9
MsG0280009332.01.T01 MTR_3g460950 41.667 108 58 2 2 109 136 238 1.90e-20 85.1
MsG0280009332.01.T01 MTR_3g060330 41.667 108 58 2 2 109 136 238 1.90e-20 85.1
MsG0280009332.01.T01 MTR_4g078290 38.655 119 67 3 1 118 230 343 2.15e-20 85.5
MsG0280009332.01.T01 MTR_4g078290 38.655 119 67 3 1 118 230 343 2.15e-20 85.5
MsG0280009332.01.T01 MTR_6g080470 38.136 118 68 2 1 118 113 225 2.57e-20 84.7
MsG0280009332.01.T01 MTR_7g114300 36.134 119 70 3 1 118 208 321 2.81e-20 84.7
MsG0280009332.01.T01 MTR_7g114300 36.134 119 70 3 1 118 208 321 2.86e-20 84.7
MsG0280009332.01.T01 MTR_2g085200 37.815 119 68 3 1 118 235 348 3.43e-20 85.1
MsG0280009332.01.T01 MTR_2g083940 41.322 121 59 5 1 117 135 247 3.63e-20 84.3
MsG0280009332.01.T01 MTR_2g090405 40.336 119 65 3 1 118 242 355 3.84e-20 84.7
MsG0280009332.01.T01 MTR_2g083940 41.322 121 59 5 1 117 189 301 4.71e-20 84.3
MsG0280009332.01.T01 MTR_7g114300 36.134 119 70 3 1 118 208 321 5.09e-20 84.3
MsG0280009332.01.T01 MTR_5g008860 36.885 122 65 4 1 118 241 354 5.77e-20 84.3
MsG0280009332.01.T01 MTR_7g114300 36.134 119 70 3 1 118 208 321 7.38e-20 84.0
MsG0280009332.01.T01 MTR_4g118780 35.246 122 67 4 1 118 205 318 1.01e-19 83.6
MsG0280009332.01.T01 MTR_2g016490 41.322 121 59 5 1 117 141 253 1.06e-19 82.8
MsG0280009332.01.T01 MTR_7g078690 40.909 110 55 4 2 109 142 243 3.50e-19 81.6
MsG0280009332.01.T01 MTR_8g028720 40.000 110 56 4 2 109 141 242 4.26e-19 81.3
MsG0280009332.01.T01 MTR_1g098300 36.885 122 65 3 1 118 227 340 4.48e-19 81.6
MsG0280009332.01.T01 MTR_1g081870 36.975 119 69 3 1 118 223 336 6.35e-19 81.3
MsG0280009332.01.T01 MTR_3g112210 41.667 108 58 2 2 109 136 238 7.60e-19 80.5
MsG0280009332.01.T01 MTR_8g012450 35.593 118 69 2 1 118 102 212 7.82e-19 80.9
MsG0280009332.01.T01 MTR_3g054080 35.593 118 71 2 1 118 115 227 9.16e-19 80.5
MsG0280009332.01.T01 MTR_8g099770 37.815 119 68 3 1 118 191 304 9.83e-19 80.9
MsG0280009332.01.T01 MTR_8g012450 35.593 118 69 2 1 118 102 212 1.05e-18 80.5
MsG0280009332.01.T01 MTR_2g020210 35.246 122 67 4 1 118 203 316 1.97e-18 79.7
MsG0280009332.01.T01 MTR_8g071230 38.938 113 58 3 7 117 108 211 2.00e-18 79.7
MsG0280009332.01.T01 MTR_6g079470 43.363 113 53 5 2 109 193 299 3.36e-18 79.3
MsG0280009332.01.T01 MTR_5g026960 38.938 113 58 3 7 117 108 211 3.74e-18 79.0
MsG0280009332.01.T01 MTR_2g021330 42.478 113 54 5 2 109 129 235 4.62e-18 78.6
MsG0280009332.01.T01 MTR_4g117490 42.478 113 54 5 2 109 129 235 4.63e-18 79.0
MsG0280009332.01.T01 MTR_3g098760 36.975 119 69 3 1 118 198 311 6.24e-18 78.6
MsG0280009332.01.T01 MTR_2g021330 42.478 113 54 5 2 109 129 235 7.81e-18 78.2
MsG0280009332.01.T01 MTR_4g117490 42.478 113 54 5 2 109 129 235 9.39e-18 77.8
MsG0280009332.01.T01 MTR_8g092290 34.783 115 69 3 1 114 242 351 9.76e-18 77.8
MsG0280009332.01.T01 MTR_1g084760 38.017 121 63 5 1 117 176 288 1.69e-17 77.0
MsG0280009332.01.T01 MTR_8g432510 37.705 122 64 5 1 118 240 353 1.90e-17 77.0
MsG0280009332.01.T01 MTR_8g086000 41.964 112 48 5 2 107 136 236 2.05e-17 76.6
MsG0280009332.01.T01 MTR_7g076030 38.843 121 62 5 1 117 135 247 2.23e-17 76.3
MsG0280009332.01.T01 MTR_8g086000 41.964 112 48 5 2 107 179 279 2.60e-17 76.6
MsG0280009332.01.T01 MTR_2g005620 39.669 121 61 5 1 117 191 303 3.11e-17 76.3
MsG0280009332.01.T01 MTR_4g095670 32.203 118 74 3 1 117 214 326 3.75e-17 75.9
MsG0280009332.01.T01 MTR_4g095400 33.051 118 73 4 1 117 183 295 4.30e-17 75.9
MsG0280009332.01.T01 MTR_7g076030 38.525 122 63 5 1 118 242 355 4.57e-17 75.9
MsG0280009332.01.T01 MTR_8g106960 41.593 113 55 5 2 109 222 328 5.44e-17 75.9
MsG0280009332.01.T01 MTR_8g106960 41.593 113 55 5 2 109 222 328 5.88e-17 75.5
MsG0280009332.01.T01 MTR_7g110060 37.705 122 64 5 1 118 176 289 8.13e-17 75.1
MsG0280009332.01.T01 MTR_1g086370 38.843 121 62 5 1 117 57 169 1.20e-16 73.9
MsG0280009332.01.T01 MTR_7g110060 38.017 121 63 5 1 117 176 288 1.23e-16 74.7
MsG0280009332.01.T01 MTR_8g093730 40.777 103 55 3 1 103 401 497 1.36e-16 74.7
MsG0280009332.01.T01 MTR_1g086370 38.843 121 62 5 1 117 143 255 1.67e-16 73.9
MsG0280009332.01.T01 MTR_3g089510 41.593 113 55 5 2 109 117 223 1.68e-16 74.3
MsG0280009332.01.T01 MTR_3g089510 41.593 113 55 5 2 109 129 235 1.80e-16 74.3
MsG0280009332.01.T01 MTR_1g086370 38.525 122 63 5 1 118 176 289 1.99e-16 73.9
MsG0280009332.01.T01 MTR_3g096230 39.806 103 56 3 1 103 346 442 2.29e-16 73.9
MsG0280009332.01.T01 MTR_5g015830 30.508 118 76 3 1 117 209 321 2.43e-16 73.9
MsG0280009332.01.T01 MTR_3g096230 39.806 103 56 3 1 103 346 442 2.69e-16 73.9
MsG0280009332.01.T01 MTR_2g072840 41.071 112 55 5 2 108 129 234 2.86e-16 73.6
MsG0280009332.01.T01 MTR_5g091680 41.964 112 54 5 2 108 126 231 2.88e-16 73.6
MsG0280009332.01.T01 MTR_5g091680 41.964 112 54 5 2 108 126 231 3.12e-16 73.6
MsG0280009332.01.T01 MTR_5g091680 41.964 112 54 5 2 108 126 231 3.72e-16 73.2
MsG0280009332.01.T01 MTR_5g091680 41.964 112 54 5 2 108 124 229 3.94e-16 73.2
MsG0280009332.01.T01 MTR_3g060390 38.889 108 45 3 2 109 118 204 4.43e-16 72.8
MsG0280009332.01.T01 MTR_3g460980 38.889 108 45 3 2 109 122 208 4.81e-16 72.4
MsG0280009332.01.T01 MTR_2g072840 41.071 112 55 5 2 108 129 234 5.54e-16 72.8
MsG0280009332.01.T01 MTR_2g072840 41.593 113 53 5 2 108 39 144 6.57e-16 72.8
MsG0280009332.01.T01 MTR_8g461040 39.640 111 58 5 2 108 130 235 1.41e-15 71.6
MsG0280009332.01.T01 MTR_1g101630 40.385 104 57 4 14 117 155 253 2.00e-15 71.2
MsG0280009332.01.T01 MTR_3g095620 36.842 114 68 3 4 117 127 236 2.16e-15 70.5
MsG0280009332.01.T01 MTR_1g100250 39.806 103 56 3 1 103 513 609 4.82e-15 70.1
MsG0280009332.01.T01 MTR_8g098425 40.206 97 52 3 7 103 516 606 9.50e-15 69.3
MsG0280009332.01.T01 MTR_3g101210 39.623 106 52 4 4 103 413 512 1.24e-14 68.9
MsG0280009332.01.T01 MTR_3g101210 39.623 106 52 4 4 103 413 512 1.95e-14 68.6
MsG0280009332.01.T01 MTR_4g094415 35.000 120 59 5 4 111 267 379 1.33e-13 66.2
MsG0280009332.01.T01 MTR_4g074875 37.624 101 57 3 3 103 123 217 2.15e-13 65.5
MsG0280009332.01.T01 MTR_4g074875 37.624 101 57 3 3 103 123 217 2.18e-13 65.5
MsG0280009332.01.T01 MTR_4g094415 37.624 101 55 4 4 103 267 360 2.72e-13 65.1
MsG0280009332.01.T01 MTR_8g070930 35.897 117 70 3 1 117 243 354 2.82e-13 65.1
MsG0280009332.01.T01 MTR_4g075410 36.634 101 58 3 3 103 123 217 4.37e-13 64.7
MsG0280009332.01.T01 MTR_4g075410 36.634 101 58 3 3 103 123 217 4.46e-13 64.7
MsG0280009332.01.T01 MTR_4g061130 38.889 108 56 5 2 107 143 242 5.77e-13 63.9
MsG0280009332.01.T01 MTR_4g128820 36.559 93 53 3 7 99 116 202 2.99e-12 62.0
MsG0280009332.01.T01 MTR_4g061330 52.083 48 23 0 70 117 10 57 1.07e-11 58.9
MsG0280009332.01.T01 MTR_3g099920 31.034 116 74 3 2 117 120 229 1.18e-11 60.5
MsG0280009332.01.T01 MTR_2g020380 32.174 115 68 3 9 118 106 215 1.83e-11 60.1
MsG0280009332.01.T01 MTR_7g089480 39.785 93 51 3 2 94 247 334 2.25e-11 59.7
MsG0280009332.01.T01 MTR_1g080020 33.628 113 68 4 5 117 113 218 2.31e-11 59.3
MsG0280009332.01.T01 MTR_3g073250 34.400 125 63 6 4 116 373 490 3.12e-11 59.3
MsG0280009332.01.T01 MTR_6g087920 47.170 53 28 0 65 117 275 327 3.27e-11 59.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280009332.01.T01 AT2G38620 45.763 118 60 1 1 118 121 234 3.98e-31 111
MsG0280009332.01.T01 AT2G38620 45.763 118 60 1 1 118 121 234 3.98e-31 111
MsG0280009332.01.T01 AT2G38620 45.763 118 60 1 1 118 59 172 8.58e-31 110
MsG0280009332.01.T01 AT2G38620 45.763 118 60 1 1 118 121 234 2.52e-30 110
MsG0280009332.01.T01 AT3G48750 45.763 118 60 2 1 118 104 217 2.52e-30 110
MsG0280009332.01.T01 AT3G54180 44.068 118 62 1 1 118 119 232 5.68e-28 104
MsG0280009332.01.T01 AT1G76540 41.525 118 65 2 1 118 122 235 8.58e-26 98.6
MsG0280009332.01.T01 AT1G20930 38.983 118 68 1 1 118 124 237 1.80e-25 97.8
MsG0280009332.01.T01 AT5G63370 44.068 118 61 2 1 118 269 381 4.46e-25 98.2
MsG0280009332.01.T01 AT5G63370 44.068 118 61 2 1 118 269 381 7.45e-25 97.8
MsG0280009332.01.T01 AT5G63370 44.068 118 61 2 1 118 269 381 7.45e-25 97.8
MsG0280009332.01.T01 AT5G63370 44.068 118 61 2 1 118 403 515 9.67e-25 97.8
MsG0280009332.01.T01 AT5G63370 44.068 118 61 2 1 118 403 515 9.67e-25 97.8
MsG0280009332.01.T01 AT5G63370 44.068 118 61 2 1 118 403 515 1.10e-24 97.8
MsG0280009332.01.T01 AT5G63370 44.068 118 61 2 1 118 403 515 1.10e-24 97.8
MsG0280009332.01.T01 AT5G63370 44.068 118 61 2 1 118 403 515 1.10e-24 97.8
MsG0280009332.01.T01 AT5G63370 44.068 118 61 2 1 118 403 515 1.10e-24 97.8
MsG0280009332.01.T01 AT5G63370 44.068 118 61 2 1 118 403 515 1.10e-24 97.8
MsG0280009332.01.T01 AT5G63610 45.946 111 57 2 1 109 131 240 3.05e-24 96.3
MsG0280009332.01.T01 AT1G67580 44.643 112 57 2 7 118 513 619 1.52e-23 94.7
MsG0280009332.01.T01 AT1G67580 44.643 112 57 2 7 118 513 619 1.52e-23 94.7
MsG0280009332.01.T01 AT1G66750 41.525 118 64 2 1 118 112 224 7.61e-23 91.3
MsG0280009332.01.T01 AT1G07880 43.478 115 55 4 2 114 137 243 1.03e-22 89.4
MsG0280009332.01.T01 AT1G18040 38.983 118 67 2 1 118 111 223 1.19e-22 91.3
MsG0280009332.01.T01 AT3G59790 42.991 107 55 3 4 110 166 266 1.64e-22 90.9
MsG0280009332.01.T01 AT4G11330 42.727 110 53 4 2 109 147 248 3.11e-22 90.1
MsG0280009332.01.T01 AT1G07880 43.478 115 55 4 2 114 137 243 6.90e-22 89.0
MsG0280009332.01.T01 AT5G10270 38.525 122 63 4 1 118 141 254 1.36e-21 89.0
MsG0280009332.01.T01 AT1G73690 38.983 118 67 2 1 118 110 222 1.54e-21 88.2
MsG0280009332.01.T01 AT4G36450 42.593 108 54 3 2 109 136 235 3.26e-21 87.0
MsG0280009332.01.T01 AT1G74330 35.294 119 73 2 1 118 222 337 4.00e-21 87.8
MsG0280009332.01.T01 AT2G46070 44.762 105 48 4 7 109 150 246 4.87e-21 86.3
MsG0280009332.01.T01 AT3G45640 41.818 110 54 4 2 109 142 243 6.71e-21 86.3
MsG0280009332.01.T01 AT2G43790 40.909 110 55 4 2 109 167 268 7.85e-21 86.3
MsG0280009332.01.T01 AT1G74330 35.294 119 73 2 1 118 222 337 8.37e-21 86.7
MsG0280009332.01.T01 AT1G74330 35.294 119 73 2 1 118 222 337 8.61e-21 86.7
MsG0280009332.01.T01 AT5G64960 37.705 122 64 4 1 118 88 201 1.11e-20 86.3
MsG0280009332.01.T01 AT2G46070 44.762 105 48 4 7 109 150 246 1.36e-20 85.5
MsG0280009332.01.T01 AT2G46070 44.762 105 48 4 7 109 184 280 1.41e-20 85.5
MsG0280009332.01.T01 AT5G64960 37.705 122 64 4 1 118 141 254 1.62e-20 85.9
MsG0280009332.01.T01 AT3G01085 38.525 122 63 4 1 118 216 329 1.65e-20 85.9
MsG0280009332.01.T01 AT3G01085 38.525 122 63 4 1 118 216 329 1.90e-20 85.9
MsG0280009332.01.T01 AT3G01085 38.525 122 63 4 1 118 216 329 1.90e-20 85.9
MsG0280009332.01.T01 AT4G18710 40.496 121 60 5 1 117 135 247 2.84e-20 83.2
MsG0280009332.01.T01 AT5G39420 36.885 122 65 4 1 118 206 319 3.10e-20 85.1
MsG0280009332.01.T01 AT1G33770 37.705 122 64 4 1 118 242 355 4.55e-20 84.7
MsG0280009332.01.T01 AT1G01560 39.831 118 61 4 2 117 144 253 6.57e-20 82.4
MsG0280009332.01.T01 AT1G01560 39.831 118 61 4 2 117 144 253 6.57e-20 82.4
MsG0280009332.01.T01 AT4G10010 36.066 122 66 4 1 118 257 370 6.76e-20 84.0
MsG0280009332.01.T01 AT1G18670 35.246 122 68 3 1 118 232 346 9.32e-20 83.6
MsG0280009332.01.T01 AT1G18670 35.246 122 68 3 1 118 232 346 9.60e-20 83.6
MsG0280009332.01.T01 AT1G18670 35.246 122 68 3 1 118 232 346 1.06e-19 83.6
MsG0280009332.01.T01 AT1G01560 39.831 118 61 4 2 117 144 253 1.42e-19 82.4
MsG0280009332.01.T01 AT4G18710 40.496 121 60 5 1 117 141 253 1.50e-19 82.8
MsG0280009332.01.T01 AT1G59580 41.667 108 58 2 2 109 136 238 1.60e-19 82.4
MsG0280009332.01.T01 AT1G59580 41.667 108 58 2 2 109 136 238 1.60e-19 82.4
MsG0280009332.01.T01 AT4G01370 41.818 110 54 4 2 109 147 248 2.06e-19 82.0
MsG0280009332.01.T01 AT4G22940 36.134 119 70 3 1 118 205 318 2.38e-19 82.4
MsG0280009332.01.T01 AT1G06390 40.496 121 60 5 1 117 171 283 2.66e-19 82.0
MsG0280009332.01.T01 AT1G06390 40.496 121 60 5 1 117 171 283 2.66e-19 82.0
MsG0280009332.01.T01 AT1G53050 36.885 122 65 4 1 118 235 348 2.73e-19 82.4
MsG0280009332.01.T01 AT1G53050 36.885 122 65 4 1 118 235 348 2.73e-19 82.4
MsG0280009332.01.T01 AT5G50860 37.815 119 68 3 1 118 215 328 2.91e-19 82.4
MsG0280009332.01.T01 AT4G22940 36.134 119 70 3 1 118 205 318 2.92e-19 82.4
MsG0280009332.01.T01 AT5G50860 37.815 119 68 3 1 118 215 328 2.98e-19 82.0
MsG0280009332.01.T01 AT1G01560 39.831 118 61 4 2 117 144 253 3.57e-19 81.6
MsG0280009332.01.T01 AT1G10210 40.741 108 59 2 2 109 136 238 4.52e-19 81.3
MsG0280009332.01.T01 AT1G10210 40.741 108 59 2 2 109 136 238 4.52e-19 81.3
MsG0280009332.01.T01 AT1G10210 40.741 108 59 2 2 109 136 238 4.52e-19 81.3
MsG0280009332.01.T01 AT1G54610 34.426 122 68 4 1 118 219 332 4.81e-19 81.6
MsG0280009332.01.T01 AT1G54610 34.426 122 68 4 1 118 219 332 4.81e-19 81.6
MsG0280009332.01.T01 AT1G54610 34.426 122 68 4 1 118 219 332 4.81e-19 81.6
MsG0280009332.01.T01 AT2G18170 40.741 108 59 2 2 109 136 238 5.25e-19 80.9
MsG0280009332.01.T01 AT4G10010 36.066 122 66 4 1 118 77 190 8.61e-19 80.9
MsG0280009332.01.T01 AT4G13020 37.607 117 66 2 1 117 102 211 9.46e-19 80.5
MsG0280009332.01.T01 AT4G13020 37.607 117 66 2 1 117 102 211 9.59e-19 80.5
MsG0280009332.01.T01 AT4G13020 37.607 117 66 2 1 117 102 211 9.61e-19 80.5
MsG0280009332.01.T01 AT4G13020 37.607 117 66 2 1 117 111 220 9.86e-19 80.5
MsG0280009332.01.T01 AT4G13020 37.607 117 66 2 1 117 110 219 9.97e-19 80.5
MsG0280009332.01.T01 AT4G13020 37.607 117 66 2 1 117 110 219 9.99e-19 80.5
MsG0280009332.01.T01 AT4G13020 37.607 117 66 2 1 117 102 211 1.02e-18 80.1
MsG0280009332.01.T01 AT4G13020 37.607 117 66 2 1 117 111 220 1.11e-18 80.5
MsG0280009332.01.T01 AT2G30980 39.669 121 61 5 1 117 173 285 1.20e-18 80.1
MsG0280009332.01.T01 AT1G03740 36.134 119 70 3 1 118 314 427 1.55e-18 80.1
MsG0280009332.01.T01 AT1G03740 36.134 119 70 3 1 118 314 427 1.80e-18 80.1
MsG0280009332.01.T01 AT5G44290 36.066 122 66 4 1 118 238 351 6.26e-18 78.6
MsG0280009332.01.T01 AT5G44290 36.066 122 66 4 1 118 238 351 6.52e-18 78.6
MsG0280009332.01.T01 AT5G44290 36.066 122 66 4 1 118 238 351 6.99e-18 78.6
MsG0280009332.01.T01 AT5G44290 36.066 122 66 4 1 118 238 351 6.99e-18 78.6
MsG0280009332.01.T01 AT5G44290 36.066 122 66 4 1 118 238 351 6.99e-18 78.6
MsG0280009332.01.T01 AT5G44290 36.066 122 66 4 1 118 238 351 6.99e-18 78.6
MsG0280009332.01.T01 AT5G44290 36.066 122 66 4 1 118 238 351 6.99e-18 78.6
MsG0280009332.01.T01 AT2G01450 41.593 113 55 5 2 109 120 226 8.91e-18 78.2
MsG0280009332.01.T01 AT2G01450 41.593 113 55 5 2 109 120 226 8.91e-18 78.2
MsG0280009332.01.T01 AT2G01450 41.593 113 55 5 2 109 120 226 8.91e-18 78.2
MsG0280009332.01.T01 AT2G01450 41.593 113 55 5 2 109 120 226 8.91e-18 78.2
MsG0280009332.01.T01 AT5G19010 42.478 113 54 5 2 109 129 235 1.05e-17 77.8
MsG0280009332.01.T01 AT4G19110 37.168 113 60 3 7 117 108 211 1.39e-17 77.4
MsG0280009332.01.T01 AT4G19110 37.168 113 60 3 7 117 108 211 1.50e-17 77.4
MsG0280009332.01.T01 AT5G45430 37.838 111 62 2 7 117 108 211 1.89e-17 77.0
MsG0280009332.01.T01 AT5G45430 37.838 111 62 2 7 117 108 211 1.92e-17 77.0
MsG0280009332.01.T01 AT3G18040 42.982 114 52 5 2 109 122 228 1.97e-17 77.0
MsG0280009332.01.T01 AT4G19110 38.679 106 54 3 7 110 52 148 1.99e-17 77.0
MsG0280009332.01.T01 AT3G18040 42.982 114 52 5 2 109 236 342 2.01e-17 77.0
MsG0280009332.01.T01 AT1G57870 38.843 121 62 5 1 117 183 295 2.03e-17 77.0
MsG0280009332.01.T01 AT1G57870 38.843 121 62 5 1 117 183 295 2.20e-17 76.6
MsG0280009332.01.T01 AT1G57870 38.843 121 62 5 1 117 183 295 2.20e-17 76.6
MsG0280009332.01.T01 AT1G57870 38.843 121 62 5 1 117 183 295 2.20e-17 76.6
MsG0280009332.01.T01 AT3G18040 42.982 114 52 5 2 109 127 233 2.24e-17 77.0
MsG0280009332.01.T01 AT3G18040 42.982 114 52 5 2 109 236 342 2.58e-17 76.6
MsG0280009332.01.T01 AT3G18040 42.982 114 52 5 2 109 39 145 2.62e-17 76.6
MsG0280009332.01.T01 AT3G05840 37.705 122 64 5 1 118 174 287 3.40e-17 76.3
MsG0280009332.01.T01 AT3G05840 37.705 122 64 5 1 118 174 287 3.40e-17 76.3
MsG0280009332.01.T01 AT5G26751 38.017 121 63 5 1 117 170 282 3.64e-17 76.3
MsG0280009332.01.T01 AT5G14640 38.525 122 63 5 1 118 175 288 3.92e-17 75.9
MsG0280009332.01.T01 AT5G14640 38.525 122 63 5 1 118 175 288 3.92e-17 75.9
MsG0280009332.01.T01 AT1G73670 42.478 113 54 6 2 109 194 300 4.44e-17 76.3
MsG0280009332.01.T01 AT1G18150 42.478 113 54 5 2 109 208 314 4.59e-17 75.9
MsG0280009332.01.T01 AT1G18150 42.478 113 54 5 2 109 208 314 4.59e-17 75.9
MsG0280009332.01.T01 AT1G18150 42.478 113 54 5 2 109 208 314 4.59e-17 75.9
MsG0280009332.01.T01 AT3G50000 32.203 118 74 4 1 117 198 310 7.60e-17 75.1
MsG0280009332.01.T01 AT5G67380 32.203 118 74 4 1 117 171 283 8.71e-17 75.1
MsG0280009332.01.T01 AT2G23080 31.356 118 75 4 1 117 128 240 1.02e-16 74.3
MsG0280009332.01.T01 AT1G09840 37.190 121 64 5 1 117 57 169 1.03e-16 73.9
MsG0280009332.01.T01 AT1G71530 31.933 119 75 3 1 118 248 361 1.04e-16 75.1
MsG0280009332.01.T01 AT5G67380 32.203 118 74 4 1 117 204 316 1.09e-16 74.7
MsG0280009332.01.T01 AT1G71530 31.933 119 75 3 1 118 248 361 1.15e-16 74.7
MsG0280009332.01.T01 AT1G71530 31.933 119 75 3 1 118 248 361 1.34e-16 74.7
MsG0280009332.01.T01 AT1G09840 37.190 121 64 5 1 117 184 296 1.55e-16 74.3
MsG0280009332.01.T01 AT1G09840 37.190 121 64 5 1 117 184 296 1.55e-16 74.3
MsG0280009332.01.T01 AT1G09840 37.190 121 64 5 1 117 184 296 1.55e-16 74.3
MsG0280009332.01.T01 AT1G09840 37.190 121 64 5 1 117 184 296 1.55e-16 74.3
MsG0280009332.01.T01 AT1G09840 37.190 121 64 5 1 117 184 296 1.55e-16 74.3
MsG0280009332.01.T01 AT1G09840 37.190 121 64 5 1 117 184 296 1.55e-16 74.3
MsG0280009332.01.T01 AT1G09840 37.190 121 64 5 1 117 184 296 1.55e-16 74.3
MsG0280009332.01.T01 AT1G09840 37.190 121 64 5 1 117 184 296 1.55e-16 74.3
MsG0280009332.01.T01 AT1G09840 37.190 121 64 5 1 117 184 296 1.55e-16 74.3
MsG0280009332.01.T01 AT1G09840 37.190 121 64 5 1 117 184 296 1.55e-16 74.3
MsG0280009332.01.T01 AT2G23080 31.356 118 75 4 1 117 128 240 1.64e-16 73.9
MsG0280009332.01.T01 AT3G14720 41.964 112 54 5 2 108 129 234 1.79e-16 74.3
MsG0280009332.01.T01 AT3G14720 41.964 112 54 5 2 108 129 234 1.79e-16 74.3
MsG0280009332.01.T01 AT2G23070 31.356 118 75 3 1 117 226 338 2.02e-16 73.9
MsG0280009332.01.T01 AT2G42880 41.593 113 55 5 2 109 129 235 2.44e-16 73.9
MsG0280009332.01.T01 AT2G42880 41.593 113 55 5 2 109 129 235 2.67e-16 73.9
MsG0280009332.01.T01 AT3G61160 36.066 122 66 5 1 118 203 316 3.42e-16 73.2
MsG0280009332.01.T01 AT3G61160 36.066 122 66 5 1 118 210 323 3.87e-16 73.2
MsG0280009332.01.T01 AT3G61160 36.066 122 66 5 1 118 203 316 4.21e-16 73.2
MsG0280009332.01.T01 AT1G09600 34.426 122 68 3 1 118 264 377 4.33e-16 73.2
MsG0280009332.01.T01 AT3G61160 36.364 121 65 5 1 117 203 315 4.55e-16 73.2
MsG0280009332.01.T01 AT3G61160 36.364 121 65 5 1 117 210 322 4.76e-16 73.2
MsG0280009332.01.T01 AT3G61160 36.364 121 65 5 1 117 203 315 4.96e-16 72.8
MsG0280009332.01.T01 AT3G14720 41.964 112 54 5 2 108 129 234 5.26e-16 73.2
MsG0280009332.01.T01 AT1G53570 38.835 103 57 3 1 103 316 412 5.68e-16 72.8
MsG0280009332.01.T01 AT1G53570 38.835 103 57 3 1 103 316 412 5.91e-16 72.8
MsG0280009332.01.T01 AT4G00720 36.885 122 65 5 1 118 239 352 8.26e-16 72.4
MsG0280009332.01.T01 AT1G53570 38.835 103 57 3 1 103 316 412 1.02e-15 72.0
MsG0280009332.01.T01 AT1G53570 38.835 103 57 3 1 103 316 412 1.02e-15 72.0
MsG0280009332.01.T01 AT1G53570 38.835 103 57 3 1 103 316 412 1.02e-15 72.0
MsG0280009332.01.T01 AT1G53570 38.835 103 57 3 1 103 316 412 1.04e-15 72.0
MsG0280009332.01.T01 AT3G05050 33.613 119 73 3 1 118 239 352 1.07e-15 72.0
MsG0280009332.01.T01 AT3G05050 33.613 119 73 3 1 118 239 352 1.07e-15 72.0
MsG0280009332.01.T01 AT3G05050 33.613 119 73 3 1 118 239 352 1.07e-15 72.0
MsG0280009332.01.T01 AT1G71530 32.432 111 69 3 1 110 248 353 1.21e-15 71.6
MsG0280009332.01.T01 AT3G04530 38.261 115 64 4 4 118 117 224 2.25e-15 70.1
MsG0280009332.01.T01 AT1G53510 40.708 113 54 5 2 108 129 234 2.40e-15 71.2
MsG0280009332.01.T01 AT1G63700 41.237 97 51 3 7 103 508 598 9.11e-15 69.7
MsG0280009332.01.T01 AT1G63700 41.237 97 51 3 7 103 508 598 9.11e-15 69.7
MsG0280009332.01.T01 AT1G57700 33.613 119 73 3 1 118 247 360 1.69e-14 68.6
MsG0280009332.01.T01 AT1G08650 34.211 114 69 4 4 117 120 227 2.62e-14 67.4
MsG0280009332.01.T01 AT1G08650 34.211 114 69 4 4 117 120 227 3.03e-14 67.4
MsG0280009332.01.T01 AT1G54510 36.842 114 65 4 4 117 109 215 3.01e-13 65.1
MsG0280009332.01.T01 AT1G54510 36.842 114 65 4 4 117 109 215 3.01e-13 65.1
MsG0280009332.01.T01 AT1G54510 36.842 114 65 4 4 117 109 215 3.01e-13 65.1
MsG0280009332.01.T01 AT1G54510 36.842 114 65 4 4 117 109 215 3.01e-13 65.1
MsG0280009332.01.T01 AT3G63280 35.088 114 67 4 4 117 109 215 3.12e-13 65.1
MsG0280009332.01.T01 AT3G63280 35.088 114 67 4 4 117 109 215 3.12e-13 65.1
MsG0280009332.01.T01 AT3G63280 35.088 114 67 4 4 117 109 215 3.12e-13 65.1
MsG0280009332.01.T01 AT1G12580 37.736 106 61 4 12 117 156 256 3.38e-13 65.1
MsG0280009332.01.T01 AT5G57630 37.374 99 56 3 7 105 29 121 9.39e-13 63.5
MsG0280009332.01.T01 AT5G57630 37.374 99 56 3 7 105 117 209 9.46e-13 63.5
MsG0280009332.01.T01 AT5G57630 37.374 99 56 3 7 105 117 209 9.46e-13 63.5
MsG0280009332.01.T01 AT2G37840 33.913 115 70 4 4 117 114 223 9.72e-13 63.5
MsG0280009332.01.T01 AT3G13530 37.500 104 57 5 3 105 123 219 1.20e-12 63.5
MsG0280009332.01.T01 AT3G07980 38.235 102 55 5 3 103 123 217 1.80e-12 63.2
MsG0280009332.01.T01 AT3G07980 36.634 101 58 3 3 103 123 217 1.87e-12 62.8
MsG0280009332.01.T01 AT1G49180 34.483 116 68 4 4 117 109 218 2.00e-12 62.8
MsG0280009332.01.T01 AT1G49180 35.345 116 67 5 4 117 109 218 2.19e-12 62.8
MsG0280009332.01.T01 AT5G35980 37.815 119 64 5 1 117 226 336 3.26e-12 62.4
MsG0280009332.01.T01 AT3G53930 33.043 115 71 4 4 117 122 231 3.66e-12 62.0
MsG0280009332.01.T01 AT3G53930 33.043 115 71 4 4 117 122 231 3.70e-12 62.0
MsG0280009332.01.T01 AT3G63280 35.088 114 67 4 4 117 163 269 4.77e-12 61.6
MsG0280009332.01.T01 AT5G35980 37.815 119 64 5 1 117 191 301 5.16e-12 61.6
MsG0280009332.01.T01 AT5G35980 37.815 119 64 5 1 117 226 336 6.40e-12 61.2
MsG0280009332.01.T01 AT2G32510 36.634 101 56 4 9 109 111 203 8.02e-12 60.8
MsG0280009332.01.T01 AT3G20860 36.937 111 63 4 7 117 111 214 1.02e-11 60.8
MsG0280009332.01.T01 AT1G50240 35.238 105 62 3 1 105 104 202 1.47e-11 60.5
MsG0280009332.01.T01 AT1G50240 35.238 105 62 3 1 105 104 202 1.47e-11 60.5
MsG0280009332.01.T01 AT3G04810 35.849 106 61 4 4 109 109 207 3.62e-11 59.3
MsG0280009332.01.T01 AT3G04810 35.849 106 61 4 4 109 109 207 3.62e-11 59.3
MsG0280009332.01.T01 AT3G04810 35.849 106 61 4 4 109 109 207 3.62e-11 59.3
MsG0280009332.01.T01 AT1G18350 37.374 99 54 3 4 99 145 238 5.35e-11 58.5
MsG0280009332.01.T01 AT3G06230 36.449 107 55 3 1 99 144 245 5.61e-11 58.2
MsG0280009332.01.T01 AT5G18700 32.407 108 67 3 11 117 108 210 6.58e-11 58.5

Find 24 sgRNAs with CRISPR-Local

Find 32 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGCAGTTGATATCTGGTTTA+TGG 0.138392 2:-50482187 MsG0280009332.01.T01:CDS
AGATATTGGCTGAAATATTT+TGG 0.170047 2:-50482104 MsG0280009332.01.T01:CDS
ACTGAAGCCAGAACATTATT+AGG 0.252604 2:+50482479 None:intergenic
ATCAACTGCAGTTGAGTAAT+TGG 0.289792 2:+50482200 None:intergenic
ACTCAACTGCAGTTGATATC+TGG 0.292132 2:-50482194 MsG0280009332.01.T01:CDS
TCTGAAACCTAATAATGTTC+TGG 0.364450 2:-50482486 MsG0280009332.01.T01:CDS
TAAAGATGAACCGCAGATAT+TGG 0.377267 2:-50482118 MsG0280009332.01.T01:CDS
AGGCTCCAACCTCTGTTCAT+TGG 0.404026 2:-50482141 MsG0280009332.01.T01:CDS
GCAGTTGATATCTGGTTTAT+GGG 0.409686 2:-50482186 MsG0280009332.01.T01:CDS
GCATATTTGTTGAGATGCTT+AGG 0.418236 2:-50482161 MsG0280009332.01.T01:CDS
GTAGAACCCATCAAAAGTTC+AGG 0.451436 2:+50482222 None:intergenic
TTAATAGAGTAGGGTGAAAG+AGG 0.470772 2:+50482389 None:intergenic
GGGTCAAGCTCTCTCCGGAT+TGG 0.482358 2:-50482543 MsG0280009332.01.T01:CDS
CTTTACCAATGAACAGAGGT+TGG 0.498726 2:+50482136 None:intergenic
TTTCTGGGTCAAGCTCTCTC+CGG 0.505238 2:-50482548 MsG0280009332.01.T01:CDS
GTGTCATACATTAATAGAGT+AGG 0.514651 2:+50482379 None:intergenic
AGTTCAGGTGCTTTATAGCA+CGG 0.527126 2:+50482237 None:intergenic
AGTATGGCAGTAAGCCAATC+CGG 0.529579 2:+50482529 None:intergenic
TGTCATACATTAATAGAGTA+GGG 0.541290 2:+50482380 None:intergenic
GTGAAATTATCTGACGACTT+TGG 0.544165 2:-50482434 MsG0280009332.01.T01:CDS
ATAGAGTAGGGTGAAAGAGG+AGG 0.608366 2:+50482392 None:intergenic
AATATTTCAGCCAATATCTG+CGG 0.646500 2:+50482108 None:intergenic
ATTATCTGACGACTTTGGTG+CGG 0.678313 2:-50482429 MsG0280009332.01.T01:CDS
TCATCTTTACCAATGAACAG+AGG 0.680053 2:+50482132 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TCAAAGCTAATTAAGATATT+GGG + Chr2:50482354-50482373 None:intergenic 20.0%
!! TTCAAAGCTAATTAAGATAT+TGG + Chr2:50482355-50482374 None:intergenic 20.0%
!!! TTCTAGTTTTATTTCAAAGA+AGG + Chr2:50482325-50482344 None:intergenic 20.0%
!!! TTTATTTTCAACTTTCAGAT+GGG - Chr2:50482394-50482413 MsG0280009332.01.T01:CDS 20.0%
! TGTCATACATTAATAGAGTA+GGG + Chr2:50482281-50482300 None:intergenic 25.0%
!!! AGATATTGGCTGAAATATTT+TGG - Chr2:50482554-50482573 MsG0280009332.01.T01:CDS 25.0%
!!! GTTTATTTTCAACTTTCAGA+TGG - Chr2:50482393-50482412 MsG0280009332.01.T01:CDS 25.0%
AATATTTCAGCCAATATCTG+CGG + Chr2:50482553-50482572 None:intergenic 30.0%
GTGTCATACATTAATAGAGT+AGG + Chr2:50482282-50482301 None:intergenic 30.0%
! TCTGAAACCTAATAATGTTC+TGG - Chr2:50482172-50482191 MsG0280009332.01.T01:CDS 30.0%
! TGTGTAGAATTTTGTGAGTA+TGG + Chr2:50482148-50482167 None:intergenic 30.0%
ACTGAAGCCAGAACATTATT+AGG + Chr2:50482182-50482201 None:intergenic 35.0%
ATCAACTGCAGTTGAGTAAT+TGG + Chr2:50482461-50482480 None:intergenic 35.0%
GTGAAATTATCTGACGACTT+TGG - Chr2:50482224-50482243 MsG0280009332.01.T01:CDS 35.0%
TAAAGATGAACCGCAGATAT+TGG - Chr2:50482540-50482559 MsG0280009332.01.T01:CDS 35.0%
TCATCTTTACCAATGAACAG+AGG + Chr2:50482529-50482548 None:intergenic 35.0%
TTAATAGAGTAGGGTGAAAG+AGG + Chr2:50482272-50482291 None:intergenic 35.0%
! GCAGTTGATATCTGGTTTAT+GGG - Chr2:50482472-50482491 MsG0280009332.01.T01:CDS 35.0%
! GCATATTTGTTGAGATGCTT+AGG - Chr2:50482497-50482516 MsG0280009332.01.T01:CDS 35.0%
! TGCAGTTGATATCTGGTTTA+TGG - Chr2:50482471-50482490 MsG0280009332.01.T01:CDS 35.0%
!! AAAGCACCTGAACTTTTGAT+GGG - Chr2:50482430-50482449 MsG0280009332.01.T01:CDS 35.0%
!! TAAAGCACCTGAACTTTTGA+TGG - Chr2:50482429-50482448 MsG0280009332.01.T01:CDS 35.0%
AGTTCAGGTGCTTTATAGCA+CGG + Chr2:50482424-50482443 None:intergenic 40.0%
ATTATCTGACGACTTTGGTG+CGG - Chr2:50482229-50482248 MsG0280009332.01.T01:CDS 40.0%
CTTTACCAATGAACAGAGGT+TGG + Chr2:50482525-50482544 None:intergenic 40.0%
GTAGAACCCATCAAAAGTTC+AGG + Chr2:50482439-50482458 None:intergenic 40.0%
! ACTCAACTGCAGTTGATATC+TGG - Chr2:50482464-50482483 MsG0280009332.01.T01:CDS 40.0%
AGTATGGCAGTAAGCCAATC+CGG + Chr2:50482132-50482151 None:intergenic 45.0%
ATAGAGTAGGGTGAAAGAGG+AGG + Chr2:50482269-50482288 None:intergenic 45.0%
AGGCTCCAACCTCTGTTCAT+TGG - Chr2:50482517-50482536 MsG0280009332.01.T01:CDS 50.0%
TTTCTGGGTCAAGCTCTCTC+CGG - Chr2:50482110-50482129 MsG0280009332.01.T01:CDS 50.0%
GGGTCAAGCTCTCTCCGGAT+TGG - Chr2:50482115-50482134 MsG0280009332.01.T01:CDS 60.0%
Chromosome Type Strat End Strand Name
Chr2 gene 50482101 50482579 50482101 ID=MsG0280009332.01;Name=MsG0280009332.01
Chr2 mRNA 50482101 50482579 50482101 ID=MsG0280009332.01.T01;Parent=MsG0280009332.01;Name=MsG0280009332.01.T01;_AED=0.33;_eAED=0.33;_QI=0|0|0|1|1|1|2|0|119
Chr2 exon 50482388 50482579 50482388 ID=MsG0280009332.01.T01:exon:8224;Parent=MsG0280009332.01.T01
Chr2 exon 50482101 50482268 50482101 ID=MsG0280009332.01.T01:exon:8223;Parent=MsG0280009332.01.T01
Chr2 CDS 50482388 50482579 50482388 ID=MsG0280009332.01.T01:cds;Parent=MsG0280009332.01.T01
Chr2 CDS 50482101 50482268 50482101 ID=MsG0280009332.01.T01:cds;Parent=MsG0280009332.01.T01
Gene Sequence

>MsG0280009332.01.T01

TTGCAGATTTTTCTGGGTCAAGCTCTCTCCGGATTGGCTTACTGCCATACTCACAAAATTCTACACAGAGATCTGAAACCTAATAATGTTCTGGCTTCAGTTGAAGAATTACTTGTCAATGAAGTGAAATTATCTGACGACTTTGGTGCGGCGAAAACGATTGAACCTCCTCTTTCACCCTACTCTATTAATATGGGTAATCCGTGCTATAAAGCACCTGAACTTTTGATGGGTTCTACCAATTACTCAACTGCAGTTGATATCTGGTTTATGGGATGCATATTTGTTGAGATGCTTAGGCTCCAACCTCTGTTCATTGGTAAAGATGAACCGCAGATATTGGCTGAAATATTTTGGTAA
Protein sequence

>MsG0280009332.01.T01

LQIFLGQALSGLAYCHTHKILHRDLKPNNVLASVEELLVNEVKLSDDFGAAKTIEPPLSPYSINMGNPCYKAPELLMGSTNYSTAVDIWFMGCIFVEMLRLQPLFIGKDEPQILAEIFW*