Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0280009989.01.T02 | XP_003596299.1 | 76.119 | 134 | 27 | 3 | 1 | 132 | 160 | 290 | 6.21E-61 | 199 |
MsG0280009989.01.T01 | XP_003596299.1 | 76.829 | 164 | 33 | 3 | 4 | 165 | 130 | 290 | 2.24E-81 | 253 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0280009989.01.T01 | Q9C557 | 61.765 | 68 | 25 | 1 | 22 | 88 | 103 | 170 | 1.22E-22 | 93.6 |
MsG0280009989.01.T02 | Q8GWF1 | 50.82 | 61 | 26 | 1 | 2 | 62 | 123 | 179 | 7.65E-15 | 72 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0280009989.01.T01 | G7IR29 | 76.829 | 164 | 33 | 3 | 4 | 165 | 130 | 290 | 1.07e-81 | 253 |
MsG0280009989.01.T02 | G7IR29 | 76.119 | 134 | 27 | 3 | 1 | 132 | 160 | 290 | 2.96e-61 | 199 |
Gene ID | Type | Classification |
---|---|---|
MsG0280009989.01.T01 | TF | WRKY |
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0280009989.01.T02 | MTR_2g075680 | 76.119 | 134 | 27 | 3 | 1 | 132 | 160 | 290 | 7.52e-65 | 199 |
MsG0280009989.01.T02 | MTR_2g075690 | 78.788 | 132 | 28 | 0 | 1 | 132 | 153 | 284 | 4.85e-62 | 192 |
MsG0280009989.01.T02 | MTR_2g075700 | 64.885 | 131 | 42 | 2 | 2 | 132 | 157 | 283 | 3.76e-52 | 167 |
MsG0280009989.01.T02 | MTR_2g075610 | 40.602 | 133 | 68 | 4 | 2 | 131 | 42 | 166 | 1.13e-24 | 93.6 |
MsG0280009989.01.T02 | MTR_2g075750 | 42.308 | 130 | 65 | 3 | 2 | 131 | 41 | 160 | 1.60e-24 | 92.8 |
MsG0280009989.01.T02 | MTR_8g032510 | 50.000 | 86 | 38 | 2 | 2 | 85 | 132 | 214 | 6.30e-21 | 85.9 |
MsG0280009989.01.T02 | MTR_0002s1250 | 44.643 | 112 | 43 | 4 | 2 | 108 | 124 | 221 | 1.34e-20 | 84.3 |
MsG0280009989.01.T02 | MTR_7g073430 | 40.000 | 120 | 55 | 3 | 2 | 115 | 135 | 243 | 5.53e-20 | 83.2 |
MsG0280009989.01.T02 | MTR_7g073380 | 45.349 | 86 | 43 | 2 | 2 | 85 | 136 | 219 | 1.47e-18 | 79.3 |
MsG0280009989.01.T02 | MTR_8g005750 | 46.667 | 90 | 34 | 3 | 2 | 85 | 116 | 197 | 1.08e-17 | 77.0 |
MsG0280009989.01.T02 | MTR_3g093830 | 36.937 | 111 | 50 | 4 | 2 | 92 | 140 | 250 | 5.07e-14 | 67.4 |
MsG0280009989.01.T02 | MTR_5g067700 | 38.462 | 91 | 51 | 3 | 2 | 91 | 119 | 205 | 8.28e-13 | 63.2 |
MsG0280009989.01.T01 | MTR_2g075680 | 76.829 | 164 | 33 | 3 | 4 | 165 | 130 | 290 | 2.71e-85 | 253 |
MsG0280009989.01.T01 | MTR_2g075690 | 79.630 | 162 | 33 | 0 | 4 | 165 | 123 | 284 | 4.56e-84 | 249 |
MsG0280009989.01.T01 | MTR_2g075700 | 64.815 | 162 | 53 | 2 | 4 | 165 | 126 | 283 | 2.60e-70 | 215 |
MsG0280009989.01.T01 | MTR_2g075610 | 46.012 | 163 | 75 | 4 | 6 | 164 | 13 | 166 | 7.90e-41 | 135 |
MsG0280009989.01.T01 | MTR_2g075750 | 46.835 | 158 | 74 | 3 | 7 | 164 | 13 | 160 | 8.53e-41 | 135 |
MsG0280009989.01.T01 | MTR_0002s1250 | 45.833 | 144 | 59 | 4 | 3 | 141 | 92 | 221 | 8.58e-35 | 122 |
MsG0280009989.01.T01 | MTR_8g032510 | 50.420 | 119 | 53 | 3 | 3 | 118 | 99 | 214 | 3.57e-33 | 119 |
MsG0280009989.01.T01 | MTR_7g073430 | 42.105 | 152 | 71 | 3 | 3 | 148 | 103 | 243 | 5.07e-33 | 118 |
MsG0280009989.01.T01 | MTR_7g073380 | 46.610 | 118 | 59 | 2 | 3 | 118 | 104 | 219 | 3.29e-32 | 116 |
MsG0280009989.01.T01 | MTR_8g005750 | 47.107 | 121 | 50 | 3 | 4 | 118 | 85 | 197 | 2.77e-29 | 108 |
MsG0280009989.01.T01 | MTR_5g067700 | 39.837 | 123 | 69 | 3 | 3 | 124 | 87 | 205 | 7.39e-23 | 91.3 |
MsG0280009989.01.T01 | MTR_3g093830 | 39.535 | 129 | 58 | 4 | 17 | 125 | 122 | 250 | 1.03e-21 | 89.4 |
MsG0280009989.01.T01 | MTR_7g117200 | 42.268 | 97 | 47 | 1 | 5 | 92 | 92 | 188 | 2.96e-19 | 83.2 |
MsG0280009989.01.T01 | MTR_8g027860 | 39.773 | 88 | 45 | 1 | 5 | 84 | 111 | 198 | 7.16e-18 | 79.3 |
MsG0280009989.01.T01 | MTR_3g090860 | 52.459 | 61 | 29 | 0 | 21 | 81 | 132 | 192 | 1.14e-16 | 75.9 |
MsG0280009989.01.T01 | MTR_5g067680 | 53.968 | 63 | 29 | 0 | 22 | 84 | 202 | 264 | 8.23e-16 | 73.9 |
MsG0280009989.01.T01 | MTR_8g099350 | 42.169 | 83 | 40 | 1 | 7 | 81 | 109 | 191 | 1.85e-15 | 72.8 |
MsG0280009989.01.T01 | MTR_7g079010 | 46.154 | 78 | 31 | 2 | 2 | 79 | 129 | 195 | 5.26e-14 | 67.4 |
MsG0280009989.01.T01 | MTR_8g092140 | 41.772 | 79 | 36 | 2 | 2 | 80 | 147 | 215 | 5.63e-14 | 67.4 |
MsG0280009989.01.T01 | MTR_7g028415 | 42.105 | 95 | 43 | 3 | 2 | 96 | 81 | 163 | 6.53e-14 | 66.2 |
MsG0280009989.01.T01 | MTR_7g028710 | 42.105 | 95 | 43 | 3 | 2 | 96 | 81 | 163 | 6.53e-14 | 66.2 |
MsG0280009989.01.T01 | MTR_8g007270 | 43.590 | 78 | 33 | 2 | 2 | 79 | 142 | 208 | 1.71e-13 | 66.2 |
MsG0280009989.01.T01 | MTR_3g104750 | 45.070 | 71 | 36 | 1 | 15 | 85 | 97 | 164 | 4.45e-13 | 63.9 |
MsG0280009989.01.T01 | MTR_3g095080 | 41.026 | 78 | 35 | 2 | 2 | 79 | 156 | 222 | 5.62e-13 | 64.7 |
MsG0280009989.01.T01 | MTR_3g095080 | 41.026 | 78 | 35 | 2 | 2 | 79 | 132 | 198 | 7.03e-13 | 64.3 |
MsG0280009989.01.T01 | MTR_7g100510 | 48.387 | 62 | 29 | 1 | 18 | 79 | 357 | 415 | 7.12e-13 | 65.5 |
MsG0280009989.01.T01 | MTR_7g109800 | 47.458 | 59 | 28 | 1 | 21 | 79 | 144 | 199 | 7.95e-13 | 65.1 |
MsG0280009989.01.T01 | MTR_8g096730 | 44.262 | 61 | 31 | 1 | 20 | 80 | 68 | 125 | 1.34e-12 | 62.0 |
MsG0280009989.01.T01 | MTR_4g122530 | 46.667 | 60 | 29 | 1 | 21 | 80 | 207 | 263 | 1.43e-12 | 64.7 |
MsG0280009989.01.T01 | MTR_5g042920 | 37.255 | 102 | 48 | 3 | 20 | 116 | 318 | 408 | 2.70e-12 | 63.9 |
MsG0280009989.01.T01 | MTR_2g033820 | 45.070 | 71 | 36 | 1 | 21 | 91 | 202 | 269 | 2.80e-12 | 63.9 |
MsG0280009989.01.T01 | MTR_5g091390 | 49.153 | 59 | 27 | 1 | 21 | 79 | 156 | 211 | 7.07e-12 | 62.4 |
MsG0280009989.01.T01 | MTR_7g011820 | 46.667 | 60 | 29 | 1 | 20 | 79 | 408 | 464 | 7.30e-12 | 62.8 |
MsG0280009989.01.T01 | MTR_4g094588 | 49.153 | 59 | 27 | 1 | 21 | 79 | 177 | 232 | 7.50e-12 | 62.4 |
MsG0280009989.01.T01 | MTR_5g043880 | 45.763 | 59 | 29 | 1 | 21 | 79 | 123 | 178 | 8.26e-12 | 62.0 |
MsG0280009989.01.T01 | MTR_5g073620 | 41.892 | 74 | 39 | 1 | 22 | 95 | 672 | 741 | 1.11e-11 | 62.4 |
MsG0280009989.01.T01 | MTR_1g086790 | 45.763 | 59 | 29 | 1 | 21 | 79 | 157 | 212 | 1.90e-11 | 61.2 |
MsG0280009989.01.T01 | MTR_4g082580 | 33.600 | 125 | 66 | 4 | 2 | 119 | 256 | 370 | 2.66e-11 | 61.2 |
MsG0280009989.01.T01 | MTR_1g015140 | 44.776 | 67 | 32 | 2 | 15 | 79 | 93 | 156 | 2.99e-11 | 58.9 |
MsG0280009989.01.T01 | MTR_1g009613 | 46.154 | 65 | 32 | 2 | 15 | 79 | 256 | 317 | 3.06e-11 | 60.8 |
MsG0280009989.01.T01 | MTR_7g062220 | 47.541 | 61 | 29 | 1 | 20 | 80 | 122 | 179 | 5.67e-11 | 60.1 |
MsG0280009989.01.T01 | MTR_3g056100 | 45.000 | 60 | 30 | 1 | 20 | 79 | 400 | 456 | 6.91e-11 | 60.1 |
MsG0280009989.01.T01 | MTR_3g056100 | 45.000 | 60 | 30 | 1 | 20 | 79 | 413 | 469 | 7.86e-11 | 59.7 |
MsG0280009989.01.T01 | MTR_5g094430 | 45.000 | 60 | 30 | 1 | 20 | 79 | 362 | 418 | 8.25e-11 | 59.7 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0280009989.01.T02 | AT5G22570 | 50.820 | 61 | 26 | 1 | 2 | 62 | 123 | 179 | 7.80e-16 | 72.0 |
MsG0280009989.01.T02 | AT1G66560 | 56.364 | 55 | 23 | 1 | 2 | 55 | 116 | 170 | 1.63e-14 | 68.2 |
MsG0280009989.01.T02 | AT5G01900 | 32.090 | 134 | 64 | 3 | 2 | 122 | 123 | 242 | 3.64e-14 | 67.4 |
MsG0280009989.01.T02 | AT1G66550 | 52.727 | 55 | 25 | 1 | 2 | 55 | 116 | 170 | 7.08e-14 | 66.2 |
MsG0280009989.01.T02 | AT1G66550 | 52.727 | 55 | 25 | 1 | 2 | 55 | 121 | 175 | 8.79e-14 | 66.2 |
MsG0280009989.01.T02 | AT1G80590 | 51.020 | 49 | 24 | 0 | 2 | 50 | 98 | 146 | 1.52e-12 | 62.8 |
MsG0280009989.01.T02 | AT1G66600 | 55.102 | 49 | 22 | 0 | 2 | 50 | 116 | 164 | 1.59e-12 | 62.8 |
MsG0280009989.01.T02 | AT3G56400 | 48.936 | 47 | 24 | 0 | 2 | 48 | 133 | 179 | 6.17e-11 | 58.5 |
MsG0280009989.01.T01 | AT1G66560 | 61.765 | 68 | 25 | 1 | 22 | 88 | 103 | 170 | 1.24e-23 | 93.6 |
MsG0280009989.01.T01 | AT5G22570 | 54.795 | 73 | 29 | 1 | 23 | 95 | 111 | 179 | 4.18e-23 | 92.8 |
MsG0280009989.01.T01 | AT1G66550 | 57.353 | 68 | 28 | 1 | 22 | 88 | 103 | 170 | 4.46e-22 | 89.4 |
MsG0280009989.01.T01 | AT1G66600 | 61.905 | 63 | 24 | 0 | 21 | 83 | 102 | 164 | 4.80e-22 | 89.0 |
MsG0280009989.01.T01 | AT1G66550 | 57.353 | 68 | 28 | 1 | 22 | 88 | 108 | 175 | 5.82e-22 | 89.4 |
MsG0280009989.01.T01 | AT5G01900 | 33.766 | 154 | 75 | 3 | 15 | 155 | 103 | 242 | 3.78e-21 | 87.0 |
MsG0280009989.01.T01 | AT1G80590 | 55.738 | 61 | 27 | 0 | 23 | 83 | 86 | 146 | 1.13e-19 | 82.8 |
MsG0280009989.01.T01 | AT3G56400 | 48.052 | 77 | 37 | 1 | 5 | 81 | 106 | 179 | 5.20e-19 | 82.0 |
MsG0280009989.01.T01 | AT2G46400 | 52.459 | 61 | 29 | 0 | 21 | 81 | 103 | 163 | 2.50e-18 | 80.1 |
MsG0280009989.01.T01 | AT5G24110 | 45.238 | 84 | 38 | 1 | 6 | 81 | 89 | 172 | 2.76e-17 | 77.4 |
MsG0280009989.01.T01 | AT2G40740 | 55.000 | 60 | 27 | 0 | 22 | 81 | 173 | 232 | 8.10e-17 | 75.9 |
MsG0280009989.01.T01 | AT2G40740 | 53.968 | 63 | 29 | 0 | 22 | 84 | 182 | 244 | 8.86e-17 | 75.9 |
MsG0280009989.01.T01 | AT4G23810 | 40.909 | 88 | 44 | 1 | 2 | 81 | 130 | 217 | 1.53e-15 | 72.8 |
MsG0280009989.01.T01 | AT4G11070 | 51.667 | 60 | 29 | 0 | 22 | 81 | 109 | 168 | 6.63e-15 | 70.5 |
MsG0280009989.01.T01 | AT4G11070 | 51.667 | 60 | 29 | 0 | 22 | 81 | 141 | 200 | 8.12e-15 | 70.9 |
MsG0280009989.01.T01 | AT5G49520 | 50.847 | 59 | 26 | 1 | 21 | 79 | 220 | 275 | 9.15e-14 | 68.2 |
MsG0280009989.01.T01 | AT4G39410 | 46.377 | 69 | 34 | 1 | 20 | 88 | 221 | 286 | 9.71e-14 | 67.8 |
MsG0280009989.01.T01 | AT2G40750 | 33.333 | 114 | 61 | 2 | 2 | 115 | 135 | 233 | 1.20e-13 | 67.8 |
MsG0280009989.01.T01 | AT2G37260 | 50.847 | 59 | 26 | 1 | 21 | 79 | 348 | 403 | 1.90e-13 | 67.4 |
MsG0280009989.01.T01 | AT2G37260 | 50.847 | 59 | 26 | 1 | 21 | 79 | 268 | 323 | 2.60e-13 | 66.6 |
MsG0280009989.01.T01 | AT2G37260 | 50.847 | 59 | 26 | 1 | 21 | 79 | 266 | 321 | 2.63e-13 | 66.6 |
MsG0280009989.01.T01 | AT2G44745 | 42.308 | 78 | 34 | 2 | 2 | 79 | 133 | 199 | 3.76e-13 | 65.1 |
MsG0280009989.01.T01 | AT5G26170 | 46.667 | 60 | 29 | 1 | 20 | 79 | 111 | 167 | 7.76e-13 | 63.5 |
MsG0280009989.01.T01 | AT1G69310 | 47.458 | 59 | 28 | 1 | 21 | 79 | 146 | 201 | 9.25e-13 | 64.7 |
MsG0280009989.01.T01 | AT1G69310 | 47.458 | 59 | 28 | 1 | 21 | 79 | 146 | 201 | 9.25e-13 | 64.7 |
MsG0280009989.01.T01 | AT1G69310 | 47.458 | 59 | 28 | 1 | 21 | 79 | 146 | 201 | 9.25e-13 | 64.7 |
MsG0280009989.01.T01 | AT2G46130 | 48.485 | 66 | 29 | 2 | 15 | 79 | 23 | 84 | 1.07e-12 | 61.6 |
MsG0280009989.01.T01 | AT1G13960 | 48.333 | 60 | 28 | 1 | 20 | 79 | 407 | 463 | 3.79e-12 | 63.5 |
MsG0280009989.01.T01 | AT4G18170 | 49.153 | 59 | 27 | 1 | 21 | 79 | 171 | 226 | 5.13e-12 | 62.8 |
MsG0280009989.01.T01 | AT2G03340 | 48.333 | 60 | 28 | 1 | 20 | 79 | 413 | 469 | 6.99e-12 | 62.8 |
MsG0280009989.01.T01 | AT1G29860 | 49.153 | 59 | 27 | 1 | 21 | 79 | 135 | 190 | 8.54e-12 | 62.0 |
MsG0280009989.01.T01 | AT1G64000 | 48.333 | 60 | 28 | 1 | 20 | 79 | 112 | 168 | 1.03e-11 | 60.8 |
MsG0280009989.01.T01 | AT1G13960 | 48.333 | 60 | 28 | 1 | 20 | 79 | 254 | 310 | 1.22e-11 | 62.0 |
MsG0280009989.01.T01 | AT5G13080 | 48.333 | 60 | 28 | 1 | 20 | 79 | 65 | 121 | 1.60e-11 | 59.3 |
MsG0280009989.01.T01 | AT5G46350 | 46.154 | 65 | 32 | 1 | 15 | 79 | 176 | 237 | 1.71e-11 | 61.6 |
MsG0280009989.01.T01 | AT3G62340 | 39.744 | 78 | 41 | 2 | 5 | 79 | 98 | 172 | 2.32e-11 | 60.8 |
MsG0280009989.01.T01 | AT4G26440 | 45.763 | 59 | 28 | 2 | 22 | 80 | 178 | 232 | 6.06e-11 | 60.1 |
MsG0280009989.01.T01 | AT4G26640 | 36.735 | 98 | 55 | 3 | 20 | 113 | 339 | 433 | 7.69e-11 | 60.1 |
MsG0280009989.01.T01 | AT4G26640 | 36.735 | 98 | 55 | 3 | 20 | 113 | 379 | 473 | 8.12e-11 | 59.7 |
MsG0280009989.01.T01 | AT5G45260 | 40.580 | 69 | 38 | 2 | 14 | 79 | 1197 | 1265 | 9.76e-11 | 59.7 |
MsG0280009989.01.T01 | AT5G41570 | 46.667 | 60 | 29 | 1 | 20 | 79 | 96 | 152 | 9.94e-11 | 57.8 |
Find 9 sgRNAs with CRISPR-Local
Find 45 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
AATTAAGTACCTGAAATATT+TGG | 0.227860 | 2:-62496944 | None:intergenic |
TAACAAATGCCAAATATTTC+AGG | 0.288144 | 2:+62496935 | MsG0280009989.01.T01:CDS |
CAAGGTCAAGTGCACCAACT+TGG | 0.438948 | 2:+62496848 | MsG0280009989.01.T01:CDS |
AAGGTCAAGTGCACCAACTT+GGG | 0.531448 | 2:+62496849 | MsG0280009989.01.T01:CDS |
TGCTTGACGATGGTCATACA+TGG | 0.563054 | 2:+62496890 | MsG0280009989.01.T01:CDS |
GGTCATACATGGAGAAAGTA+CGG | 0.573821 | 2:+62496901 | MsG0280009989.01.T01:CDS |
TGCACCAACTTGGGAAAAGA+CGG | 0.575025 | 2:+62496858 | MsG0280009989.01.T01:CDS |
ACCATCGTCAAGCAATATTG+AGG | 0.593203 | 2:-62496881 | None:intergenic |
GCCTCAATATTGCTTGACGA+TGG | 0.655101 | 2:+62496880 | MsG0280009989.01.T01:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TTTATAATTCAAAACTTAAT+TGG | + | Chr2:62497203-62497222 | MsG0280009989.01.T01:intron | 10.0% |
!! | AATTAAGTACCTGAAATATT+TGG | - | Chr2:62496947-62496966 | None:intergenic | 20.0% |
!! | ATTACAATTATATCTAAGAG+TGG | - | Chr2:62497125-62497144 | None:intergenic | 20.0% |
!! | TAATATAGAATTGTTATCAG+AGG | - | Chr2:62497404-62497423 | None:intergenic | 20.0% |
! | ATAAACAAAAATCGCATAAC+TGG | - | Chr2:62497588-62497607 | None:intergenic | 25.0% |
! | ATTCCAAATTTAAGTCTGAA+TGG | - | Chr2:62497372-62497391 | None:intergenic | 25.0% |
! | TAACAAATGCCAAATATTTC+AGG | + | Chr2:62496935-62496954 | MsG0280009989.01.T01:CDS | 25.0% |
! | TTACCATTCAGACTTAAATT+TGG | + | Chr2:62497366-62497385 | MsG0280009989.01.T01:CDS | 25.0% |
! | TTGGAACAATAGTCAAAATT+AGG | + | Chr2:62497024-62497043 | MsG0280009989.01.T01:intron | 25.0% |
!! | ATCCAGAATGATAATTTTTC+TGG | + | Chr2:62497535-62497554 | MsG0280009989.01.T01:CDS | 25.0% |
!! | TTAATTGGTAATATGTATGC+AGG | + | Chr2:62497218-62497237 | MsG0280009989.01.T01:intron | 25.0% |
AGTTCTTTGAACATGTTTGA+TGG | - | Chr2:62497287-62497306 | None:intergenic | 30.0% | |
ATCTACAAAAGAGGAATACA+AGG | + | Chr2:62497507-62497526 | MsG0280009989.01.T01:CDS | 30.0% | |
ATGTATGCAGGAATTACTAT+AGG | + | Chr2:62497230-62497249 | MsG0280009989.01.T01:intron | 30.0% | |
ATTGTTATCAGAGGAGAAAA+TGG | - | Chr2:62497395-62497414 | None:intergenic | 30.0% | |
CTCCAGAAAAATTATCATTC+TGG | - | Chr2:62497540-62497559 | None:intergenic | 30.0% | |
CTTGAAATGTTGTTATCGAA+AGG | - | Chr2:62497430-62497449 | None:intergenic | 30.0% | |
TAATATGTAGTCCTGTACAA+AGG | - | Chr2:62497322-62497341 | None:intergenic | 30.0% | |
TTGTACAGGACTACATATTA+TGG | + | Chr2:62497322-62497341 | MsG0280009989.01.T01:CDS | 30.0% | |
ACTTCTTGCATCTACAAAAG+AGG | + | Chr2:62497498-62497517 | MsG0280009989.01.T01:CDS | 35.0% | |
AGTCAACATCATGTACTTGT+TGG | + | Chr2:62497005-62497024 | MsG0280009989.01.T01:intron | 35.0% | |
GACTAATCTTGATTCTCAAG+TGG | - | Chr2:62496989-62497008 | None:intergenic | 35.0% | |
! | AAGAGCTTTTGCAAATGTGA+TGG | - | Chr2:62497348-62497367 | None:intergenic | 35.0% |
ACCATCGTCAAGCAATATTG+AGG | - | Chr2:62496884-62496903 | None:intergenic | 40.0% | |
ATGTAGTCCTGTACAAAGGA+GGG | - | Chr2:62497318-62497337 | None:intergenic | 40.0% | |
GATTCTCAAGTGGATGTAGA+TGG | - | Chr2:62496979-62496998 | None:intergenic | 40.0% | |
GGTCATACATGGAGAAAGTA+CGG | + | Chr2:62496901-62496920 | MsG0280009989.01.T01:CDS | 40.0% | |
TATGTAGTCCTGTACAAAGG+AGG | - | Chr2:62497319-62497338 | None:intergenic | 40.0% | |
TCATCGAAGAGTCGTAGATT+AGG | + | Chr2:62497063-62497082 | MsG0280009989.01.T01:intron | 40.0% | |
AAGACAACCCTCCTTTGTAC+AGG | + | Chr2:62497308-62497327 | MsG0280009989.01.T01:CDS | 45.0% | |
AAGGTCAAGTGCACCAACTT+GGG | + | Chr2:62496849-62496868 | MsG0280009989.01.T01:CDS | 45.0% | |
GATTCTCCGATGCGAACAAT+TGG | - | Chr2:62497564-62497583 | None:intergenic | 45.0% | |
GCCTCAATATTGCTTGACGA+TGG | + | Chr2:62496880-62496899 | MsG0280009989.01.T01:CDS | 45.0% | |
TGCACCAACTTGGGAAAAGA+CGG | + | Chr2:62496858-62496877 | MsG0280009989.01.T01:CDS | 45.0% | |
TGCTTGACGATGGTCATACA+TGG | + | Chr2:62496890-62496909 | MsG0280009989.01.T01:CDS | 45.0% | |
TGGAGACCAATTGTTCGCAT+CGG | + | Chr2:62497555-62497574 | MsG0280009989.01.T01:CDS | 45.0% | |
CAAGGTCAAGTGCACCAACT+TGG | + | Chr2:62496848-62496867 | MsG0280009989.01.T01:CDS | 50.0% | |
!! | GTAGATGCAAGAAGTGCCAG+TGG | - | Chr2:62497493-62497512 | None:intergenic | 50.0% |
! | GAGGCCGTCTTTTCCCAAGT+TGG | - | Chr2:62496865-62496884 | None:intergenic | 55.0% |
!! | GATGCAAGAAGTGCCAGTGG+TGG | - | Chr2:62497490-62497509 | None:intergenic | 55.0% |
! | GATGGTGGTCGCGGTCGAAA+TGG | - | Chr2:62497466-62497485 | None:intergenic | 60.0% |
!! | AGAAGTGCCAGTGGTGGCGA+TGG | - | Chr2:62497484-62497503 | None:intergenic | 60.0% |
! | AGTGCCAGTGGTGGCGATGG+TGG | - | Chr2:62497481-62497500 | None:intergenic | 65.0% |
! | AGTGGTGGCGATGGTGGTCG+CGG | - | Chr2:62497475-62497494 | None:intergenic | 65.0% |
GCGACCACCATCGCCACCAC+TGG | + | Chr2:62497474-62497493 | MsG0280009989.01.T01:CDS | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
Chr2 | gene | 62496832 | 62497612 | 62496832 | ID=MsG0280009989.01;Name=MsG0280009989.01 |
Chr2 | mRNA | 62496832 | 62497612 | 62496832 | ID=MsG0280009989.01.T01;Parent=MsG0280009989.01;Name=MsG0280009989.01.T01;_AED=0.13;_eAED=0.13;_QI=0|0|0|1|0|0|2|0|165 |
Chr2 | exon | 62496832 | 62496956 | 62496832 | ID=MsG0280009989.01.T01:exon:14135;Parent=MsG0280009989.01.T01 |
Chr2 | CDS | 62496832 | 62496956 | 62496832 | ID=MsG0280009989.01.T01:cds;Parent=MsG0280009989.01.T01 |
Chr2 | CDS | 62497240 | 62497612 | 62497240 | ID=MsG0280009989.01.T01:cds;Parent=MsG0280009989.01.T01 |
Chr2 | mRNA | 62496931 | 62497612 | 62496931 | ID=MsG0280009989.01.T02;Parent=MsG0280009989.01;Name=MsG0280009989.01.T02;_AED=0.19;_eAED=0.20;_QI=0|0|0|1|0|0|2|0|132 |
Chr2 | exon | 62496931 | 62496956 | 62496931 | ID=MsG0280009989.01.T02:exon:14137;Parent=MsG0280009989.01.T02 |
Chr2 | CDS | 62496931 | 62496956 | 62496931 | ID=MsG0280009989.01.T02:cds;Parent=MsG0280009989.01.T02 |
Chr2 | CDS | 62497240 | 62497612 | 62497240 | ID=MsG0280009989.01.T02:cds;Parent=MsG0280009989.01.T02 |
Gene Sequence |
Protein sequence |