Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280010124.01.T01 | GAU29642.1 | 75.841 | 327 | 39 | 9 | 1 | 300 | 1 | 314 | 4.97E-152 | 438 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280010124.01.T01 | Q9MAH8 | 42.513 | 374 | 121 | 16 | 4 | 299 | 33 | 390 | 1.52E-65 | 213 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280010124.01.T01 | A0A2Z6MXT7 | 75.841 | 327 | 39 | 9 | 1 | 300 | 1 | 314 | 2.37e-152 | 438 |
| Gene ID | Type | Classification |
|---|---|---|
| MsG0280010124.01.T01 | TF | TCP |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280010124.01.T01 | MTR_2g078200 | 89.369 | 301 | 24 | 4 | 1 | 300 | 1 | 294 | 8.93e-153 | 429 |
| MsG0280010124.01.T01 | MTR_8g463380 | 41.278 | 407 | 118 | 13 | 3 | 299 | 37 | 432 | 2.24e-74 | 234 |
| MsG0280010124.01.T01 | MTR_2g090960 | 38.643 | 339 | 134 | 11 | 3 | 291 | 7 | 321 | 9.32e-59 | 191 |
| MsG0280010124.01.T01 | MTR_4g079580 | 36.254 | 331 | 143 | 9 | 3 | 281 | 5 | 319 | 2.17e-49 | 167 |
| MsG0280010124.01.T01 | MTR_7g015010 | 62.162 | 74 | 28 | 0 | 14 | 87 | 51 | 124 | 8.90e-25 | 102 |
| MsG0280010124.01.T01 | MTR_6g015350 | 63.235 | 68 | 25 | 0 | 14 | 81 | 43 | 110 | 4.16e-21 | 92.0 |
| MsG0280010124.01.T01 | MTR_4g109660 | 58.824 | 68 | 28 | 0 | 14 | 81 | 50 | 117 | 1.66e-20 | 89.7 |
| MsG0280010124.01.T01 | MTR_3g026050 | 47.423 | 97 | 47 | 2 | 14 | 109 | 51 | 144 | 2.54e-20 | 90.5 |
| MsG0280010124.01.T01 | MTR_1g103380 | 57.377 | 61 | 26 | 0 | 19 | 79 | 200 | 260 | 1.18e-16 | 80.5 |
| MsG0280010124.01.T01 | MTR_6g017055 | 58.333 | 60 | 25 | 0 | 20 | 79 | 126 | 185 | 4.25e-16 | 78.6 |
| MsG0280010124.01.T01 | MTR_7g018500 | 58.621 | 58 | 24 | 0 | 22 | 79 | 122 | 179 | 8.09e-16 | 77.4 |
| MsG0280010124.01.T01 | MTR_4g111935 | 53.731 | 67 | 30 | 1 | 14 | 79 | 125 | 191 | 6.75e-15 | 74.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280010124.01.T01 | AT1G53230 | 42.513 | 374 | 121 | 16 | 4 | 299 | 33 | 390 | 1.55e-66 | 213 |
| MsG0280010124.01.T01 | AT1G53230 | 42.513 | 374 | 121 | 16 | 4 | 299 | 33 | 390 | 1.55e-66 | 213 |
| MsG0280010124.01.T01 | AT2G31070 | 85.526 | 76 | 11 | 0 | 3 | 78 | 12 | 87 | 1.32e-39 | 142 |
| MsG0280010124.01.T01 | AT4G18390 | 50.000 | 100 | 42 | 2 | 2 | 101 | 29 | 120 | 1.18e-23 | 99.8 |
| MsG0280010124.01.T01 | AT4G18390 | 50.000 | 100 | 42 | 2 | 2 | 101 | 29 | 120 | 1.18e-23 | 99.8 |
| MsG0280010124.01.T01 | AT3G02150 | 57.317 | 82 | 33 | 1 | 14 | 93 | 68 | 149 | 3.55e-23 | 96.7 |
| MsG0280010124.01.T01 | AT3G02150 | 57.317 | 82 | 33 | 1 | 14 | 93 | 68 | 149 | 3.86e-23 | 98.2 |
| MsG0280010124.01.T01 | AT1G30210 | 58.333 | 84 | 31 | 1 | 14 | 97 | 44 | 123 | 1.73e-22 | 95.9 |
| MsG0280010124.01.T01 | AT1G30210 | 58.333 | 84 | 31 | 1 | 14 | 97 | 44 | 123 | 1.73e-22 | 95.9 |
| MsG0280010124.01.T01 | AT5G60970 | 58.824 | 68 | 28 | 0 | 14 | 81 | 57 | 124 | 8.75e-21 | 91.7 |
| MsG0280010124.01.T01 | AT5G08070 | 53.571 | 84 | 32 | 2 | 2 | 83 | 20 | 98 | 4.02e-20 | 87.8 |
| MsG0280010124.01.T01 | AT5G08070 | 53.571 | 84 | 32 | 2 | 2 | 83 | 20 | 98 | 4.02e-20 | 87.8 |
| MsG0280010124.01.T01 | AT1G68800 | 57.143 | 63 | 27 | 0 | 16 | 78 | 108 | 170 | 8.64e-20 | 88.6 |
| MsG0280010124.01.T01 | AT1G68800 | 57.143 | 63 | 27 | 0 | 16 | 78 | 108 | 170 | 9.60e-20 | 88.6 |
| MsG0280010124.01.T01 | AT3G15030 | 44.138 | 145 | 62 | 4 | 168 | 299 | 281 | 419 | 1.14e-17 | 83.2 |
| MsG0280010124.01.T01 | AT3G15030 | 44.138 | 145 | 62 | 4 | 168 | 299 | 281 | 419 | 1.14e-17 | 83.2 |
| MsG0280010124.01.T01 | AT3G15030 | 44.138 | 145 | 62 | 4 | 168 | 299 | 281 | 419 | 1.14e-17 | 83.2 |
| MsG0280010124.01.T01 | AT3G15030 | 44.138 | 145 | 62 | 4 | 168 | 299 | 281 | 419 | 1.14e-17 | 83.2 |
| MsG0280010124.01.T01 | AT1G67260 | 54.545 | 66 | 30 | 0 | 15 | 80 | 82 | 147 | 1.96e-17 | 82.0 |
| MsG0280010124.01.T01 | AT1G67260 | 54.545 | 66 | 30 | 0 | 15 | 80 | 82 | 147 | 1.97e-17 | 82.0 |
| MsG0280010124.01.T01 | AT1G67260 | 54.545 | 66 | 30 | 0 | 15 | 80 | 82 | 147 | 1.97e-17 | 82.0 |
| MsG0280010124.01.T01 | AT3G18550 | 55.738 | 61 | 27 | 0 | 19 | 79 | 147 | 207 | 1.67e-15 | 77.0 |
| MsG0280010124.01.T01 | AT3G18550 | 55.738 | 61 | 27 | 0 | 19 | 79 | 147 | 207 | 1.69e-15 | 76.6 |
| MsG0280010124.01.T01 | AT3G18550 | 55.738 | 61 | 27 | 0 | 19 | 79 | 147 | 207 | 1.77e-15 | 76.6 |
| MsG0280010124.01.T01 | AT3G18550 | 55.738 | 61 | 27 | 0 | 19 | 79 | 147 | 207 | 1.77e-15 | 76.6 |
Find 78 sgRNAs with CRISPR-Local
Find 86 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAGCCAATCAAGTGCTTTAC+TGG | 0.263366 | 2:-65029112 | None:intergenic |
| TTACTAAACGACACCGTTTC+AGG | 0.281541 | 2:-65029342 | None:intergenic |
| TCGGGTGCCGGATTTGCTTC+TGG | 0.295233 | 2:+65029705 | MsG0280010124.01.T01:CDS |
| TTCCGTGTGCCGGCACGAAT+TGG | 0.322438 | 2:+65029741 | MsG0280010124.01.T01:CDS |
| CGACGTCAAGCGGGTGGTTC+GGG | 0.323280 | 2:+65029687 | MsG0280010124.01.T01:CDS |
| AGTGGTGGCGGTGGCGGTGG+TGG | 0.360090 | 2:+65029498 | MsG0280010124.01.T01:CDS |
| ACTGGCAGTGGTGGCGGTGG+CGG | 0.367510 | 2:+65029492 | MsG0280010124.01.T01:CDS |
| TTGACGGAGGTCACATTATA+AGG | 0.376567 | 2:+65028959 | MsG0280010124.01.T01:CDS |
| TCGACGTCAAGCGGGTGGTT+CGG | 0.377963 | 2:+65029686 | MsG0280010124.01.T01:CDS |
| GGCAGTGGTGGCGGTGGCGG+TGG | 0.394087 | 2:+65029495 | MsG0280010124.01.T01:CDS |
| GGAATGGTGACGTGGAATTC+CGG | 0.402921 | 2:+65029447 | MsG0280010124.01.T01:CDS |
| GGCGGTGGCGGTGGTGGTGA+TGG | 0.409503 | 2:+65029504 | MsG0280010124.01.T01:CDS |
| CAAGCGGGTGGTTCGGGTGC+CGG | 0.418610 | 2:+65029693 | MsG0280010124.01.T01:CDS |
| CACCATTCCATCAAAATTAC+CGG | 0.418656 | 2:-65029433 | None:intergenic |
| AAAGCCACCAGAAGCAAATC+CGG | 0.422822 | 2:-65029712 | None:intergenic |
| CGTAAAATTCAATAGCGGTA+TGG | 0.430606 | 2:-65029059 | None:intergenic |
| ACGAACTGAAGGATTGTAAC+TGG | 0.446835 | 2:-65029622 | None:intergenic |
| AAGATCGACTGGGCTTTGAT+AGG | 0.456624 | 2:+65029088 | MsG0280010124.01.T01:CDS |
| GTAAAGTTTGCACGGCGAAA+GGG | 0.459864 | 2:+65029007 | MsG0280010124.01.T01:CDS |
| GTAAAATTCAATAGCGGTAT+GGG | 0.466376 | 2:-65029058 | None:intergenic |
| GCTGCTGCTACTATTGATAC+TGG | 0.476694 | 2:+65029474 | MsG0280010124.01.T01:CDS |
| TCGTGGTTCTTCACCGTCGC+CGG | 0.479666 | 2:+65029536 | MsG0280010124.01.T01:CDS |
| AATGAACGGTGGAGAAATAG+TGG | 0.479738 | 2:+65028933 | None:intergenic |
| TCAAAATGAAATACCTGAAA+CGG | 0.483741 | 2:+65029329 | MsG0280010124.01.T01:CDS |
| ACAATCCTTCAGTTCGTGCT+TGG | 0.487224 | 2:+65029628 | MsG0280010124.01.T01:CDS |
| AGTAAAGTTTGCACGGCGAA+AGG | 0.487726 | 2:+65029006 | MsG0280010124.01.T01:CDS |
| AGACAGACGCGTCCGTCTCT+CGG | 0.489881 | 2:+65029035 | MsG0280010124.01.T01:CDS |
| TTGAAAAGAGTAGGTTTCCA+TGG | 0.494573 | 2:-65029180 | None:intergenic |
| TTACGATGTTCAAGATCGAC+TGG | 0.498681 | 2:+65029077 | MsG0280010124.01.T01:CDS |
| GGCCCAGTAAAGCACTTGAT+TGG | 0.499781 | 2:+65029109 | MsG0280010124.01.T01:CDS |
| TGCATGGCGGTTTATCTGAC+AGG | 0.502645 | 2:+65029781 | MsG0280010124.01.T01:CDS |
| CGTGTGCCGGCACGAATTGG+AGG | 0.505599 | 2:+65029744 | MsG0280010124.01.T01:CDS |
| TGAGCGAGTTGGTCGATGGC+AGG | 0.509170 | 2:-65029150 | None:intergenic |
| GATACTGGCAGTGGTGGCGG+TGG | 0.526931 | 2:+65029489 | MsG0280010124.01.T01:CDS |
| AACTCGCTCATCTTCCTCCA+TGG | 0.528899 | 2:+65029163 | MsG0280010124.01.T01:CDS |
| CTCCAATTCGTGCCGGCACA+CGG | 0.530036 | 2:-65029743 | None:intergenic |
| AGGATTGTAACTGGACTGAA+GGG | 0.547857 | 2:-65029613 | None:intergenic |
| GCTACTATTGATACTGGCAG+TGG | 0.551683 | 2:+65029480 | MsG0280010124.01.T01:CDS |
| AGACGGACGCGTCTGTCTCT+CGG | 0.552176 | 2:-65029030 | None:intergenic |
| TAGCGGTATGGGCCGAGAGA+CGG | 0.558275 | 2:-65029047 | None:intergenic |
| GGCTGATTATCGACGTCAAG+CGG | 0.558536 | 2:+65029677 | MsG0280010124.01.T01:CDS |
| ATTGATACTGGCAGTGGTGG+CGG | 0.563896 | 2:+65029486 | MsG0280010124.01.T01:CDS |
| GGTGCCGGATTTGCTTCTGG+TGG | 0.566408 | 2:+65029708 | MsG0280010124.01.T01:CDS |
| AGCCAATCAAGTGCTTTACT+GGG | 0.566827 | 2:-65029111 | None:intergenic |
| AATAGTAGCAGCAGCACCAC+CGG | 0.571665 | 2:-65029466 | None:intergenic |
| GGAGAAATAGTGGAAGTTGA+CGG | 0.571965 | 2:+65028943 | MsG0280010124.01.T01:CDS |
| TGGTTCTTCACCGTCGCCGG+TGG | 0.573281 | 2:+65029539 | MsG0280010124.01.T01:CDS |
| AAGGATTGTAACTGGACTGA+AGG | 0.573483 | 2:-65029614 | None:intergenic |
| AATTCAACGGCGAGAATCAG+AGG | 0.575041 | 2:-65029817 | None:intergenic |
| TTCTGACCATACATCATCGC+CGG | 0.576031 | 2:-65029567 | None:intergenic |
| TGCGCCGGCGACATTTGTTG+CGG | 0.586332 | 2:+65029656 | MsG0280010124.01.T01:CDS |
| GCTGATTATCGACGTCAAGC+GGG | 0.587761 | 2:+65029678 | MsG0280010124.01.T01:CDS |
| TCGTGCTTGGATAGATGCGC+CGG | 0.589204 | 2:+65029641 | MsG0280010124.01.T01:CDS |
| TCTATCCAAGCACGAACTGA+AGG | 0.592530 | 2:-65029633 | None:intergenic |
| GAATCAGTATCTTTCACAGA+GGG | 0.594638 | 2:+65029587 | MsG0280010124.01.T01:CDS |
| TCATCACCTCCAATTCGTGC+CGG | 0.596792 | 2:-65029750 | None:intergenic |
| GATTATGGAGGAATAATGAA+CGG | 0.602608 | 2:+65028919 | None:intergenic |
| TCAGCCGCAACAAATGTCGC+CGG | 0.604069 | 2:-65029660 | None:intergenic |
| TATGGAGGAATAATGAACGG+TGG | 0.607439 | 2:+65028922 | None:intergenic |
| AAGATGAGCGAGTTGGTCGA+TGG | 0.611325 | 2:-65029154 | None:intergenic |
| ACGAATTGGAGGTGATGATG+AGG | 0.624959 | 2:+65029755 | MsG0280010124.01.T01:CDS |
| TACGATGTTCAAGATCGACT+GGG | 0.627373 | 2:+65029078 | MsG0280010124.01.T01:CDS |
| ATGGAGGAAGATGAGCGAGT+TGG | 0.629741 | 2:-65029161 | None:intergenic |
| TCGTCATAGTAAAGTTTGCA+CGG | 0.630099 | 2:+65028999 | MsG0280010124.01.T01:CDS |
| TGTTGCTGTTTGAAAAGAGT+AGG | 0.632829 | 2:-65029189 | None:intergenic |
| GATTATCGACGTCAAGCGGG+TGG | 0.637375 | 2:+65029681 | MsG0280010124.01.T01:CDS |
| GGTCACATTATAAGGTCAAG+AGG | 0.643297 | 2:+65028967 | MsG0280010124.01.T01:CDS |
| ACTATTGATACTGGCAGTGG+TGG | 0.667942 | 2:+65029483 | MsG0280010124.01.T01:CDS |
| AAAAGAGTAGGTTTCCATGG+AGG | 0.670357 | 2:-65029177 | None:intergenic |
| AACATCGTAAAATTCAATAG+CGG | 0.671747 | 2:-65029064 | None:intergenic |
| GAATCAGAGGAAGCAGACGA+CGG | 0.673313 | 2:-65029804 | None:intergenic |
| GGTGATGATGAGGAGATGCA+TGG | 0.698910 | 2:+65029765 | MsG0280010124.01.T01:CDS |
| GGATTGTAACTGGACTGAAG+GGG | 0.704803 | 2:-65029612 | None:intergenic |
| ATGGTGACGTGGAATTCCGG+TGG | 0.707885 | 2:+65029450 | MsG0280010124.01.T01:CDS |
| GAAATAGTGGAAGTTGACGG+AGG | 0.730713 | 2:+65028946 | MsG0280010124.01.T01:CDS |
| AATCAGTATCTTTCACAGAG+GGG | 0.746034 | 2:+65029588 | MsG0280010124.01.T01:CDS |
| AGAATCAGTATCTTTCACAG+AGG | 0.756640 | 2:+65029586 | MsG0280010124.01.T01:CDS |
| GATGATGAGGAGATGCATGG+CGG | 0.819316 | 2:+65029768 | MsG0280010124.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| ! | AACATCGTAAAATTCAATAG+CGG | - | Chr2:65029067-65029086 | None:intergenic | 25.0% |
| ! | TCAAAATGAAATACCTGAAA+CGG | + | Chr2:65029329-65029348 | MsG0280010124.01.T01:CDS | 25.0% |
| !!! | TCAGGTATTTCATTTTGAAA+CGG | - | Chr2:65029327-65029346 | None:intergenic | 25.0% |
| GTAAAATTCAATAGCGGTAT+GGG | - | Chr2:65029061-65029080 | None:intergenic | 30.0% | |
| AATCAGTATCTTTCACAGAG+GGG | + | Chr2:65029588-65029607 | MsG0280010124.01.T01:CDS | 35.0% | |
| AGAATCAGTATCTTTCACAG+AGG | + | Chr2:65029586-65029605 | MsG0280010124.01.T01:CDS | 35.0% | |
| CACCATTCCATCAAAATTAC+CGG | - | Chr2:65029436-65029455 | None:intergenic | 35.0% | |
| CGTAAAATTCAATAGCGGTA+TGG | - | Chr2:65029062-65029081 | None:intergenic | 35.0% | |
| GAATCAGTATCTTTCACAGA+GGG | + | Chr2:65029587-65029606 | MsG0280010124.01.T01:CDS | 35.0% | |
| TCGTCATAGTAAAGTTTGCA+CGG | + | Chr2:65028999-65029018 | MsG0280010124.01.T01:CDS | 35.0% | |
| TTGAAAAGAGTAGGTTTCCA+TGG | - | Chr2:65029183-65029202 | None:intergenic | 35.0% | |
| !! | TGTTGCTGTTTGAAAAGAGT+AGG | - | Chr2:65029192-65029211 | None:intergenic | 35.0% |
| AAAAGAGTAGGTTTCCATGG+AGG | - | Chr2:65029180-65029199 | None:intergenic | 40.0% | |
| AAGGATTGTAACTGGACTGA+AGG | - | Chr2:65029617-65029636 | None:intergenic | 40.0% | |
| ACGAACTGAAGGATTGTAAC+TGG | - | Chr2:65029625-65029644 | None:intergenic | 40.0% | |
| AGCCAATCAAGTGCTTTACT+GGG | - | Chr2:65029114-65029133 | None:intergenic | 40.0% | |
| AGGATTGTAACTGGACTGAA+GGG | - | Chr2:65029616-65029635 | None:intergenic | 40.0% | |
| GGTCACATTATAAGGTCAAG+AGG | + | Chr2:65028967-65028986 | MsG0280010124.01.T01:CDS | 40.0% | |
| TACGATGTTCAAGATCGACT+GGG | + | Chr2:65029078-65029097 | MsG0280010124.01.T01:CDS | 40.0% | |
| TTACGATGTTCAAGATCGAC+TGG | + | Chr2:65029077-65029096 | MsG0280010124.01.T01:CDS | 40.0% | |
| TTACTAAACGACACCGTTTC+AGG | - | Chr2:65029345-65029364 | None:intergenic | 40.0% | |
| TTGACGGAGGTCACATTATA+AGG | + | Chr2:65028959-65028978 | MsG0280010124.01.T01:CDS | 40.0% | |
| ! | CTTTTCGCCGGTAATTTTGA+TGG | + | Chr2:65029426-65029445 | MsG0280010124.01.T01:CDS | 40.0% |
| ! | GGAGAAATAGTGGAAGTTGA+CGG | + | Chr2:65028943-65028962 | MsG0280010124.01.T01:CDS | 40.0% |
| !! | ATTTTGATGGAATGGTGACG+TGG | + | Chr2:65029439-65029458 | MsG0280010124.01.T01:CDS | 40.0% |
| AAAGCCACCAGAAGCAAATC+CGG | - | Chr2:65029715-65029734 | None:intergenic | 45.0% | |
| ACAATCCTTCAGTTCGTGCT+TGG | + | Chr2:65029628-65029647 | MsG0280010124.01.T01:CDS | 45.0% | |
| ACTATTGATACTGGCAGTGG+TGG | + | Chr2:65029483-65029502 | MsG0280010124.01.T01:CDS | 45.0% | |
| AGTAAAGTTTGCACGGCGAA+AGG | + | Chr2:65029006-65029025 | MsG0280010124.01.T01:CDS | 45.0% | |
| GAGCCAATCAAGTGCTTTAC+TGG | - | Chr2:65029115-65029134 | None:intergenic | 45.0% | |
| GCTACTATTGATACTGGCAG+TGG | + | Chr2:65029480-65029499 | MsG0280010124.01.T01:CDS | 45.0% | |
| GCTGCTGCTACTATTGATAC+TGG | + | Chr2:65029474-65029493 | MsG0280010124.01.T01:CDS | 45.0% | |
| GGATTGTAACTGGACTGAAG+GGG | - | Chr2:65029615-65029634 | None:intergenic | 45.0% | |
| GTAAAGTTTGCACGGCGAAA+GGG | + | Chr2:65029007-65029026 | MsG0280010124.01.T01:CDS | 45.0% | |
| TCTATCCAAGCACGAACTGA+AGG | - | Chr2:65029636-65029655 | None:intergenic | 45.0% | |
| TTCTGACCATACATCATCGC+CGG | - | Chr2:65029570-65029589 | None:intergenic | 45.0% | |
| ! | AAGATCGACTGGGCTTTGAT+AGG | + | Chr2:65029088-65029107 | MsG0280010124.01.T01:CDS | 45.0% |
| ! | ACGAATTGGAGGTGATGATG+AGG | + | Chr2:65029755-65029774 | MsG0280010124.01.T01:CDS | 45.0% |
| ! | GAAATAGTGGAAGTTGACGG+AGG | + | Chr2:65028946-65028965 | MsG0280010124.01.T01:CDS | 45.0% |
| ! | GTTTTTCCGGCGATGATGTA+TGG | + | Chr2:65029561-65029580 | MsG0280010124.01.T01:CDS | 45.0% |
| ! | TTTGCTTCTGGTGGCTTTTC+TGG | + | Chr2:65029717-65029736 | MsG0280010124.01.T01:CDS | 45.0% |
| !! | CGCCGGTAATTTTGATGGAA+TGG | + | Chr2:65029431-65029450 | MsG0280010124.01.T01:CDS | 45.0% |
| !!! | GGTGATGGTTTTGTGTTTCG+TGG | + | Chr2:65029519-65029538 | MsG0280010124.01.T01:CDS | 45.0% |
| AACTCGCTCATCTTCCTCCA+TGG | + | Chr2:65029163-65029182 | MsG0280010124.01.T01:CDS | 50.0% | |
| AATAGTAGCAGCAGCACCAC+CGG | - | Chr2:65029469-65029488 | None:intergenic | 50.0% | |
| ATCATCGCCGGAAAAACCAC+CGG | - | Chr2:65029558-65029577 | None:intergenic | 50.0% | |
| ATGGAGGAAGATGAGCGAGT+TGG | - | Chr2:65029164-65029183 | None:intergenic | 50.0% | |
| ATTGATACTGGCAGTGGTGG+CGG | + | Chr2:65029486-65029505 | MsG0280010124.01.T01:CDS | 50.0% | |
| GAATCAGAGGAAGCAGACGA+CGG | - | Chr2:65029807-65029826 | None:intergenic | 50.0% | |
| GATGATGAGGAGATGCATGG+CGG | + | Chr2:65029768-65029787 | MsG0280010124.01.T01:CDS | 50.0% | |
| GCTGATTATCGACGTCAAGC+GGG | + | Chr2:65029678-65029697 | MsG0280010124.01.T01:CDS | 50.0% | |
| GGCTGATTATCGACGTCAAG+CGG | + | Chr2:65029677-65029696 | MsG0280010124.01.T01:CDS | 50.0% | |
| TCATCACCTCCAATTCGTGC+CGG | - | Chr2:65029753-65029772 | None:intergenic | 50.0% | |
| TGCATGGCGGTTTATCTGAC+AGG | + | Chr2:65029781-65029800 | MsG0280010124.01.T01:CDS | 50.0% | |
| ! | GGAATGGTGACGTGGAATTC+CGG | + | Chr2:65029447-65029466 | MsG0280010124.01.T01:CDS | 50.0% |
| ! | GGCCCAGTAAAGCACTTGAT+TGG | + | Chr2:65029109-65029128 | MsG0280010124.01.T01:CDS | 50.0% |
| ! | GGTGATGATGAGGAGATGCA+TGG | + | Chr2:65029765-65029784 | MsG0280010124.01.T01:CDS | 50.0% |
| !! | AAGATGAGCGAGTTGGTCGA+TGG | - | Chr2:65029157-65029176 | None:intergenic | 50.0% |
| !!! | CTTTTCTGGTTTCCGTGTGC+CGG | + | Chr2:65029731-65029750 | MsG0280010124.01.T01:CDS | 50.0% |
| GATTATCGACGTCAAGCGGG+TGG | + | Chr2:65029681-65029700 | MsG0280010124.01.T01:CDS | 55.0% | |
| TCAGCCGCAACAAATGTCGC+CGG | - | Chr2:65029663-65029682 | None:intergenic | 55.0% | |
| TCGTGCTTGGATAGATGCGC+CGG | + | Chr2:65029641-65029660 | MsG0280010124.01.T01:CDS | 55.0% | |
| ! | ATGGTGACGTGGAATTCCGG+TGG | + | Chr2:65029450-65029469 | MsG0280010124.01.T01:CDS | 55.0% |
| ! | CAACAGCACGTGCTTTTCGC+CGG | + | Chr2:65029414-65029433 | MsG0280010124.01.T01:CDS | 55.0% |
| AGACAGACGCGTCCGTCTCT+CGG | + | Chr2:65029035-65029054 | MsG0280010124.01.T01:CDS | 60.0% | |
| AGACGGACGCGTCTGTCTCT+CGG | - | Chr2:65029033-65029052 | None:intergenic | 60.0% | |
| TAGCGGTATGGGCCGAGAGA+CGG | - | Chr2:65029050-65029069 | None:intergenic | 60.0% | |
| TCGACGTCAAGCGGGTGGTT+CGG | + | Chr2:65029686-65029705 | MsG0280010124.01.T01:CDS | 60.0% | |
| TCGTGGTTCTTCACCGTCGC+CGG | + | Chr2:65029536-65029555 | MsG0280010124.01.T01:CDS | 60.0% | |
| ! | ACCGTCGCCGGTGGTTTTTC+CGG | + | Chr2:65029548-65029567 | MsG0280010124.01.T01:CDS | 60.0% |
| ! | CTCCAATTCGTGCCGGCACA+CGG | - | Chr2:65029746-65029765 | None:intergenic | 60.0% |
| ! | GGTGCCGGATTTGCTTCTGG+TGG | + | Chr2:65029708-65029727 | MsG0280010124.01.T01:CDS | 60.0% |
| ! | TGCGCCGGCGACATTTGTTG+CGG | + | Chr2:65029656-65029675 | MsG0280010124.01.T01:CDS | 60.0% |
| ! | TTCCGTGTGCCGGCACGAAT+TGG | + | Chr2:65029741-65029760 | MsG0280010124.01.T01:CDS | 60.0% |
| !! | TCGGGTGCCGGATTTGCTTC+TGG | + | Chr2:65029705-65029724 | MsG0280010124.01.T01:CDS | 60.0% |
| !! | TGAGCGAGTTGGTCGATGGC+AGG | - | Chr2:65029153-65029172 | None:intergenic | 60.0% |
| CGACGTCAAGCGGGTGGTTC+GGG | + | Chr2:65029687-65029706 | MsG0280010124.01.T01:CDS | 65.0% | |
| GCCGGAAAAACCACCGGCGA+CGG | - | Chr2:65029552-65029571 | None:intergenic | 65.0% | |
| TGGTTCTTCACCGTCGCCGG+TGG | + | Chr2:65029539-65029558 | MsG0280010124.01.T01:CDS | 65.0% | |
| ! | CGTGTGCCGGCACGAATTGG+AGG | + | Chr2:65029744-65029763 | MsG0280010124.01.T01:CDS | 65.0% |
| !! | GATACTGGCAGTGGTGGCGG+TGG | + | Chr2:65029489-65029508 | MsG0280010124.01.T01:CDS | 65.0% |
| ! | CAAGCGGGTGGTTCGGGTGC+CGG | + | Chr2:65029693-65029712 | MsG0280010124.01.T01:CDS | 70.0% |
| !! | ACTGGCAGTGGTGGCGGTGG+CGG | + | Chr2:65029492-65029511 | MsG0280010124.01.T01:CDS | 70.0% |
| ! | GGCGGTGGCGGTGGTGGTGA+TGG | + | Chr2:65029504-65029523 | MsG0280010124.01.T01:CDS | 75.0% |
| !! | AGTGGTGGCGGTGGCGGTGG+TGG | + | Chr2:65029498-65029517 | MsG0280010124.01.T01:CDS | 75.0% |
| !!! | GGCAGTGGTGGCGGTGGCGG+TGG | + | Chr2:65029495-65029514 | MsG0280010124.01.T01:CDS | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr2 | gene | 65028934 | 65029836 | 65028934 | ID=MsG0280010124.01;Name=MsG0280010124.01 |
| Chr2 | mRNA | 65028934 | 65029836 | 65028934 | ID=MsG0280010124.01.T01;Parent=MsG0280010124.01;Name=MsG0280010124.01.T01;_AED=0.45;_eAED=0.45;_QI=0|-1|0|1|-1|1|1|0|300 |
| Chr2 | exon | 65028934 | 65029836 | 65028934 | ID=MsG0280010124.01.T01:exon:17975;Parent=MsG0280010124.01.T01 |
| Chr2 | CDS | 65028934 | 65029836 | 65028934 | ID=MsG0280010124.01.T01:cds;Parent=MsG0280010124.01.T01 |
| Gene Sequence |
| Protein sequence |
