AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0280010588.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280010588.01.T01 MTR_2g088000 95.047 424 20 1 1 424 180 602 0.0 767
MsG0280010588.01.T01 MTR_4g132430 55.352 383 130 12 3 380 127 473 9.64e-110 332
MsG0280010588.01.T01 MTR_4g132430 54.933 375 128 10 11 380 1 339 1.56e-108 324
MsG0280010588.01.T01 MTR_2g023930 51.106 407 146 13 1 381 154 533 3.26e-102 315
MsG0280010588.01.T01 MTR_4g047580 44.196 448 194 11 2 412 110 538 1.30e-97 302
MsG0280010588.01.T01 MTR_4g049760 45.995 437 191 10 2 416 118 531 4.73e-97 301
MsG0280010588.01.T01 MTR_4g049790 45.050 404 176 11 2 385 143 520 3.25e-96 299
MsG0280010588.01.T01 MTR_3g053330 44.531 384 157 11 4 377 107 444 3.06e-91 283
MsG0280010588.01.T01 MTR_7g110720 51.938 258 80 9 154 403 172 393 9.25e-70 226
MsG0280010588.01.T01 MTR_7g110720 51.938 258 80 9 154 403 199 420 1.40e-69 226
MsG0280010588.01.T01 MTR_2g045360 36.247 389 174 13 2 376 80 408 4.30e-53 183
MsG0280010588.01.T01 MTR_7g009730 31.303 476 226 18 1 402 51 499 5.22e-47 170
MsG0280010588.01.T01 MTR_4g094412 42.748 262 124 7 155 391 227 487 2.09e-43 159
MsG0280010588.01.T01 MTR_4g094412 42.748 262 124 7 155 391 218 478 3.09e-43 158
MsG0280010588.01.T01 MTR_4g107970 37.158 366 162 12 1 315 4 352 4.49e-40 150
MsG0280010588.01.T01 MTR_4g107970 37.158 366 162 12 1 315 81 429 1.41e-39 150
MsG0280010588.01.T01 MTR_5g044695 84.615 65 7 1 137 201 46 107 1.47e-31 116
MsG0280010588.01.T01 MTR_6g038890 47.799 159 51 6 43 201 92 218 1.84e-31 120
MsG0280010588.01.T01 MTR_4g007060 30.702 228 101 7 148 374 105 276 1.87e-26 108
MsG0280010588.01.T01 MTR_4g007060 31.140 228 100 8 148 374 139 310 2.10e-26 108
MsG0280010588.01.T01 MTR_5g094430 44.628 121 56 3 123 233 172 291 2.38e-25 107
MsG0280010588.01.T01 MTR_5g094430 44.628 121 56 3 123 233 194 313 2.72e-25 107
MsG0280010588.01.T01 MTR_3g056100 38.122 181 83 5 81 233 297 476 2.74e-25 108
MsG0280010588.01.T01 MTR_3g056100 38.122 181 83 5 81 233 153 332 2.98e-25 107
MsG0280010588.01.T01 MTR_3g056100 39.535 172 80 5 81 233 297 463 5.42e-25 107
MsG0280010588.01.T01 MTR_3g056100 39.535 172 80 5 81 233 153 319 5.53e-25 106
MsG0280010588.01.T01 MTR_5g094430 44.628 121 56 3 123 233 306 425 7.93e-25 107
MsG0280010588.01.T01 MTR_3g009470 37.423 163 77 3 75 233 415 556 1.90e-24 106
MsG0280010588.01.T01 MTR_3g009470 42.683 82 44 3 172 252 281 360 1.21e-12 70.1
MsG0280010588.01.T01 MTR_3g031220 54.430 79 35 1 153 231 347 424 2.11e-24 105
MsG0280010588.01.T01 MTR_3g031220 47.619 63 31 2 171 233 198 258 4.33e-11 65.1
MsG0280010588.01.T01 MTR_1g013790 39.516 124 62 3 111 231 48 161 5.85e-24 100
MsG0280010588.01.T01 MTR_1g013760 48.889 90 46 0 156 245 125 214 9.72e-24 100
MsG0280010588.01.T01 MTR_7g011820 50.575 87 42 1 147 233 386 471 1.23e-23 103
MsG0280010588.01.T01 MTR_7g011820 52.459 61 27 2 171 231 228 286 7.46e-13 70.5
MsG0280010588.01.T01 MTR_5g097490 51.724 87 41 1 145 231 226 311 1.41e-23 102
MsG0280010588.01.T01 MTR_3g106060 52.632 76 36 0 154 229 121 196 2.34e-23 99.8
MsG0280010588.01.T01 MTR_5g074400 52.381 84 39 1 150 233 399 481 2.89e-23 102
MsG0280010588.01.T01 MTR_5g074400 35.714 112 60 4 120 231 202 301 2.26e-11 66.2
MsG0280010588.01.T01 MTR_4g013260 53.165 79 36 1 153 231 318 395 4.39e-23 101
MsG0280010588.01.T01 MTR_4g013260 40.000 75 42 2 157 231 172 243 1.14e-11 67.0
MsG0280010588.01.T01 MTR_4g122530 51.948 77 36 1 155 231 192 267 4.48e-23 100
MsG0280010588.01.T01 MTR_7g071120 53.571 84 38 1 150 233 303 385 4.97e-23 101
MsG0280010588.01.T01 MTR_7g109800 46.739 92 42 2 155 246 129 213 1.79e-22 97.1
MsG0280010588.01.T01 MTR_5g042920 50.617 81 39 1 153 233 302 381 2.86e-22 98.6
MsG0280010588.01.T01 MTR_5g042920 49.180 61 29 2 171 231 151 209 4.86e-12 67.8
MsG0280010588.01.T01 MTR_8g096730 40.659 91 53 1 144 234 43 132 5.70e-22 92.0
MsG0280010588.01.T01 MTR_5g043880 47.126 87 45 1 142 228 95 180 6.80e-22 95.1
MsG0280010588.01.T01 MTR_7g080020 51.250 80 38 1 154 233 476 554 9.04e-22 98.6
MsG0280010588.01.T01 MTR_7g080020 50.000 60 28 2 172 231 281 338 3.11e-11 65.9
MsG0280010588.01.T01 MTR_3g104750 46.914 81 42 1 148 228 81 160 1.20e-21 91.7
MsG0280010588.01.T01 MTR_7g080000 51.250 80 38 1 154 233 415 493 1.29e-21 97.8
MsG0280010588.01.T01 MTR_7g080000 47.692 65 32 2 167 231 230 292 2.22e-11 66.2
MsG0280010588.01.T01 MTR_2g033820 49.351 77 38 1 155 231 187 262 1.62e-21 95.9
MsG0280010588.01.T01 MTR_4g082580 49.383 81 40 1 153 233 260 339 1.82e-21 95.9
MsG0280010588.01.T01 MTR_4g082580 41.463 82 43 3 171 251 145 222 1.82e-11 65.9
MsG0280010588.01.T01 MTR_1g015140 50.685 73 35 1 156 228 87 158 3.73e-21 90.1
MsG0280010588.01.T01 MTR_7g028415 50.704 71 34 1 160 230 82 151 1.38e-20 89.0
MsG0280010588.01.T01 MTR_7g028710 50.704 71 34 1 160 230 82 151 1.38e-20 89.0
MsG0280010588.01.T01 MTR_1g086790 40.000 115 65 2 155 266 142 255 1.59e-20 92.0
MsG0280010588.01.T01 MTR_2g105060 30.085 236 87 9 149 374 67 234 2.04e-20 90.1
MsG0280010588.01.T01 MTR_2g105060 30.085 236 87 9 149 374 142 309 2.43e-20 91.7
MsG0280010588.01.T01 MTR_4g094588 51.351 74 35 1 158 231 165 237 4.27e-20 91.3
MsG0280010588.01.T01 MTR_1g009613 47.561 82 43 0 155 236 246 327 5.93e-20 90.9
MsG0280010588.01.T01 MTR_3g095080 46.067 89 46 2 154 242 127 213 6.49e-20 88.2
MsG0280010588.01.T01 MTR_3g095080 46.067 89 46 2 154 242 151 237 8.15e-20 88.6
MsG0280010588.01.T01 MTR_7g100510 43.529 85 47 1 147 231 337 420 3.08e-19 89.7
MsG0280010588.01.T01 MTR_7g100510 50.000 60 28 2 172 231 190 247 1.20e-11 66.6
MsG0280010588.01.T01 MTR_8g092140 45.556 90 46 3 154 242 142 229 3.98e-19 86.3
MsG0280010588.01.T01 MTR_7g079010 46.250 80 42 1 149 228 119 197 4.42e-19 85.9
MsG0280010588.01.T01 MTR_4g130900 50.649 77 37 1 155 231 343 418 4.47e-19 89.7
MsG0280010588.01.T01 MTR_5g091390 48.649 74 37 1 158 231 144 216 1.18e-18 86.7
MsG0280010588.01.T01 MTR_8g087000 54.930 71 31 1 162 231 67 137 1.25e-18 85.1
MsG0280010588.01.T01 MTR_8g087000 54.930 71 31 1 162 231 66 136 1.38e-18 85.1
MsG0280010588.01.T01 MTR_8g007270 47.368 76 39 1 154 229 137 211 1.47e-18 84.7
MsG0280010588.01.T01 MTR_4g094908 46.835 79 42 0 155 233 250 328 3.05e-18 85.9
MsG0280010588.01.T01 MTR_1g070455 47.436 78 41 0 155 232 277 354 3.28e-18 85.9
MsG0280010588.01.T01 MTR_8g092010 44.595 74 40 1 158 231 95 167 3.76e-18 82.4
MsG0280010588.01.T01 MTR_5g016610 47.368 76 40 0 155 230 183 258 5.53e-18 84.0
MsG0280010588.01.T01 MTR_2g016770 54.839 62 28 0 171 232 35 96 6.82e-18 82.4
MsG0280010588.01.T01 MTR_2g016770 54.839 62 28 0 171 232 27 88 8.92e-18 82.0
MsG0280010588.01.T01 MTR_1g077780 45.455 77 41 1 155 231 46 121 9.22e-18 80.1
MsG0280010588.01.T01 MTR_4g127040 48.000 75 39 0 155 229 229 303 1.09e-17 84.0
MsG0280010588.01.T01 MTR_2g083870 51.429 70 34 0 162 231 71 140 1.28e-17 82.8
MsG0280010588.01.T01 MTR_7g109600 38.384 99 55 1 141 233 17 115 1.77e-17 82.4
MsG0280010588.01.T01 MTR_2g024350 35.714 140 80 2 166 295 3 142 3.89e-17 80.5
MsG0280010588.01.T01 MTR_3g095040 45.946 74 39 1 158 231 105 177 5.12e-17 79.7
MsG0280010588.01.T01 MTR_3g108960 45.946 74 40 0 155 228 298 371 2.46e-16 80.9
MsG0280010588.01.T01 MTR_7g062220 35.484 155 89 5 87 232 32 184 6.82e-16 78.6
MsG0280010588.01.T01 MTR_2g024380 44.156 77 43 0 166 242 246 322 8.03e-16 79.7
MsG0280010588.01.T01 MTR_0117s0040 47.887 71 37 0 158 228 61 131 2.00e-15 75.9
MsG0280010588.01.T01 MTR_1g099600 40.426 94 54 1 168 261 182 273 3.08e-15 76.6
MsG0280010588.01.T01 MTR_6g086555 36.774 155 79 6 95 231 113 266 3.79e-15 77.4
MsG0280010588.01.T01 MTR_2g032030 51.667 60 29 0 172 231 268 327 4.84e-15 77.4
MsG0280010588.01.T01 MTR_8g028565 50.000 64 32 0 168 231 152 215 5.82e-15 75.9
MsG0280010588.01.T01 MTR_2g032030 50.820 61 30 0 171 231 267 327 7.30e-15 76.6
MsG0280010588.01.T01 MTR_7g079040 42.683 82 35 1 162 231 133 214 1.95e-14 74.3
MsG0280010588.01.T01 MTR_4g007060 44.262 61 34 0 148 208 139 199 6.91e-14 71.2
MsG0280010588.01.T01 MTR_3g090860 48.684 76 32 2 158 226 115 190 8.71e-14 72.4
MsG0280010588.01.T01 MTR_1g078260 42.466 73 40 2 158 229 234 305 9.44e-14 73.2
MsG0280010588.01.T01 MTR_3g009470 42.683 82 44 3 172 252 281 360 4.40e-13 71.2
MsG0280010588.01.T01 MTR_8g098945 45.161 62 34 0 170 231 128 189 9.14e-13 68.6
MsG0280010588.01.T01 MTR_7g073380 34.579 107 67 2 147 250 98 204 1.11e-12 68.6
MsG0280010588.01.T01 MTR_7g073430 36.449 107 65 2 147 250 97 203 2.11e-12 67.8
MsG0280010588.01.T01 MTR_8g027860 36.036 111 56 3 131 226 83 193 2.49e-12 68.2
MsG0280010588.01.T01 MTR_5g067680 53.448 58 25 1 172 227 203 260 2.68e-12 68.2
MsG0280010588.01.T01 MTR_2g075680 40.541 74 42 1 155 226 132 205 1.43e-11 65.5
MsG0280010588.01.T01 MTR_3g031220 47.619 63 31 2 171 233 198 258 1.95e-11 65.9
MsG0280010588.01.T01 MTR_5g097500 36.782 87 54 1 145 231 204 289 3.97e-11 64.3
MsG0280010588.01.T01 MTR_8g069935 30.337 89 50 1 155 231 303 391 5.37e-11 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280010588.01.T01 AT1G62300 48.426 413 166 9 1 393 167 552 4.19e-106 325
MsG0280010588.01.T01 AT4G04450 49.742 388 171 10 4 377 32 409 9.79e-98 299
MsG0280010588.01.T01 AT4G04450 49.742 388 171 10 4 377 126 503 4.12e-96 298
MsG0280010588.01.T01 AT4G22070 49.272 412 156 11 1 377 121 514 1.04e-84 269
MsG0280010588.01.T01 AT4G22070 49.272 412 156 11 1 377 121 514 1.04e-84 269
MsG0280010588.01.T01 AT4G22070 49.272 412 156 11 1 377 121 514 1.04e-84 269
MsG0280010588.01.T01 AT4G22070 49.272 412 156 11 1 377 121 514 1.04e-84 269
MsG0280010588.01.T01 AT4G01720 40.561 392 158 13 1 374 109 443 8.38e-62 207
MsG0280010588.01.T01 AT5G15130 32.719 434 223 16 1 379 4 423 4.89e-49 174
MsG0280010588.01.T01 AT5G15130 32.719 434 223 16 1 379 46 465 1.59e-48 174
MsG0280010588.01.T01 AT1G68150 67.273 110 32 1 155 264 219 324 4.77e-45 160
MsG0280010588.01.T01 AT1G18860 37.748 302 122 6 154 390 222 522 4.39e-43 158
MsG0280010588.01.T01 AT1G69810 45.604 182 92 4 127 306 100 276 4.93e-38 140
MsG0280010588.01.T01 AT1G69810 45.604 182 92 4 127 306 158 334 6.41e-38 142
MsG0280010588.01.T01 AT2G38470 44.628 121 65 2 153 273 344 462 3.87e-26 110
MsG0280010588.01.T01 AT2G38470 48.333 60 29 2 172 231 185 242 4.70e-11 65.1
MsG0280010588.01.T01 AT1G80840 30.603 232 98 7 148 374 118 291 1.07e-24 103
MsG0280010588.01.T01 AT4G26640 55.128 78 34 1 154 231 188 264 1.35e-24 104
MsG0280010588.01.T01 AT4G26640 55.128 78 34 1 154 231 188 264 1.35e-24 104
MsG0280010588.01.T01 AT4G26640 55.128 78 34 1 154 231 188 264 1.35e-24 104
MsG0280010588.01.T01 AT4G26640 55.128 78 34 1 154 231 188 264 1.35e-24 104
MsG0280010588.01.T01 AT4G26640 55.128 78 34 1 154 231 324 400 2.23e-24 105
MsG0280010588.01.T01 AT4G26640 55.128 78 34 1 154 231 292 368 2.39e-24 105
MsG0280010588.01.T01 AT4G26640 55.128 78 34 1 154 231 364 440 3.10e-24 105
MsG0280010588.01.T01 AT2G04880 47.674 86 44 1 150 235 262 346 1.81e-23 102
MsG0280010588.01.T01 AT2G04880 33.103 145 84 5 159 295 92 231 3.67e-11 65.1
MsG0280010588.01.T01 AT5G07100 41.880 117 61 3 119 231 87 200 2.46e-23 97.8
MsG0280010588.01.T01 AT5G07100 41.880 117 61 3 119 231 87 200 2.46e-23 97.8
MsG0280010588.01.T01 AT5G07100 41.880 117 61 3 119 231 87 200 2.46e-23 97.8
MsG0280010588.01.T01 AT5G07100 41.880 117 61 3 119 231 87 200 2.46e-23 97.8
MsG0280010588.01.T01 AT2G04880 47.674 86 44 1 150 235 286 370 2.73e-23 102
MsG0280010588.01.T01 AT2G04880 40.964 83 40 3 159 234 92 172 7.77e-11 64.3
MsG0280010588.01.T01 AT1G13960 53.165 79 36 1 153 231 391 468 3.98e-23 102
MsG0280010588.01.T01 AT1G13960 49.180 61 29 2 171 231 229 287 3.03e-12 68.6
MsG0280010588.01.T01 AT5G07100 40.625 128 66 4 108 231 172 293 4.31e-23 99.4
MsG0280010588.01.T01 AT1G13960 53.165 79 36 1 153 231 238 315 5.28e-23 100
MsG0280010588.01.T01 AT1G13960 49.180 61 29 2 171 231 76 134 5.97e-12 67.0
MsG0280010588.01.T01 AT5G56270 53.750 80 36 1 154 233 470 548 1.14e-22 101
MsG0280010588.01.T01 AT5G56270 49.180 61 29 2 172 232 274 332 4.57e-11 65.5
MsG0280010588.01.T01 AT1G29860 39.706 136 71 4 155 280 120 254 1.34e-22 97.4
MsG0280010588.01.T01 AT4G31800 58.462 65 27 0 170 234 110 174 2.36e-22 95.9
MsG0280010588.01.T01 AT5G26170 50.685 73 35 1 157 229 99 170 2.61e-22 93.6
MsG0280010588.01.T01 AT4G31800 58.462 65 27 0 170 234 175 239 2.66e-22 97.1
MsG0280010588.01.T01 AT2G25000 42.708 96 55 0 140 235 72 167 2.69e-22 95.1
MsG0280010588.01.T01 AT2G25000 42.708 96 55 0 140 235 72 167 2.69e-22 95.1
MsG0280010588.01.T01 AT2G25000 42.708 96 55 0 140 235 94 189 2.74e-22 95.9
MsG0280010588.01.T01 AT5G49520 49.351 77 38 1 155 231 205 280 2.87e-22 98.6
MsG0280010588.01.T01 AT2G25000 42.708 96 55 0 140 235 115 210 3.97e-22 95.9
MsG0280010588.01.T01 AT2G03340 48.276 87 44 1 147 233 391 476 6.01e-22 98.6
MsG0280010588.01.T01 AT2G03340 49.180 61 29 2 171 231 250 308 1.47e-12 69.7
MsG0280010588.01.T01 AT4G18170 51.948 77 36 1 155 231 156 231 2.96e-21 94.4
MsG0280010588.01.T01 AT1G69310 42.157 102 55 2 130 228 103 203 5.30e-21 92.8
MsG0280010588.01.T01 AT1G69310 42.157 102 55 2 130 228 103 203 5.30e-21 92.8
MsG0280010588.01.T01 AT1G69310 42.157 102 55 2 130 228 103 203 5.30e-21 92.8
MsG0280010588.01.T01 AT3G01080 46.512 86 45 1 146 231 319 403 5.58e-21 95.1
MsG0280010588.01.T01 AT3G01080 47.059 85 44 1 147 231 282 365 5.89e-21 94.7
MsG0280010588.01.T01 AT5G13080 48.684 76 38 1 158 233 54 128 6.50e-21 89.0
MsG0280010588.01.T01 AT3G01970 51.351 74 35 1 157 230 51 123 8.62e-21 88.6
MsG0280010588.01.T01 AT2G47260 50.649 77 37 1 155 231 158 233 9.84e-21 93.2
MsG0280010588.01.T01 AT2G30250 50.000 80 39 1 154 233 311 389 1.78e-20 93.2
MsG0280010588.01.T01 AT4G26440 50.633 79 38 1 155 233 356 433 2.07e-20 94.0
MsG0280010588.01.T01 AT4G26440 50.000 62 29 2 171 232 178 237 1.05e-12 70.5
MsG0280010588.01.T01 AT5G41570 50.000 82 39 2 148 228 74 154 6.46e-20 87.4
MsG0280010588.01.T01 AT5G46350 50.000 74 36 1 158 231 170 242 7.87e-20 90.1
MsG0280010588.01.T01 AT1G64000 41.748 103 55 2 146 248 89 186 8.30e-20 87.4
MsG0280010588.01.T01 AT4G39410 47.368 76 39 1 154 229 206 280 2.07e-19 88.6
MsG0280010588.01.T01 AT1G55600 43.820 89 49 1 145 233 281 368 3.80e-19 89.7
MsG0280010588.01.T01 AT4G30935 50.649 77 37 1 155 231 315 390 4.92e-19 89.4
MsG0280010588.01.T01 AT2G46130 48.718 78 39 1 151 228 10 86 5.62e-19 82.4
MsG0280010588.01.T01 AT2G23320 57.627 59 25 0 172 230 241 299 1.29e-18 86.7
MsG0280010588.01.T01 AT4G24240 50.000 76 38 0 155 230 265 340 1.39e-18 87.0
MsG0280010588.01.T01 AT3G62340 50.000 78 38 1 158 235 105 181 2.32e-18 85.1
MsG0280010588.01.T01 AT2G44745 46.667 75 39 1 154 228 128 201 2.45e-18 84.0
MsG0280010588.01.T01 AT2G30590 48.352 91 40 3 152 235 288 378 3.49e-18 86.3
MsG0280010588.01.T01 AT5G28650 49.383 81 35 2 155 229 240 320 3.67e-18 85.5
MsG0280010588.01.T01 AT2G24570 50.000 74 37 0 155 228 227 300 3.84e-18 85.1
MsG0280010588.01.T01 AT5G64810 47.887 71 36 1 158 228 97 166 6.20e-18 82.0
MsG0280010588.01.T01 AT4G31550 48.649 74 38 0 155 228 230 303 1.09e-17 84.0
MsG0280010588.01.T01 AT4G31550 48.649 74 38 0 155 228 229 302 1.13e-17 84.0
MsG0280010588.01.T01 AT3G04670 48.148 81 36 2 155 229 240 320 2.12e-17 83.2
MsG0280010588.01.T01 AT1G29280 47.143 70 37 0 162 231 65 134 2.16e-17 82.0
MsG0280010588.01.T01 AT2G37260 49.333 75 34 2 166 237 262 335 9.93e-17 81.6
MsG0280010588.01.T01 AT2G37260 48.438 64 31 2 172 235 84 145 3.37e-13 70.9
MsG0280010588.01.T01 AT2G37260 49.333 75 34 2 166 237 264 337 1.06e-16 81.3
MsG0280010588.01.T01 AT2G37260 48.438 64 31 2 172 235 86 147 3.60e-13 70.9
MsG0280010588.01.T01 AT2G37260 49.333 75 34 2 166 237 344 417 1.61e-16 81.6
MsG0280010588.01.T01 AT2G37260 48.438 64 31 2 172 235 166 227 4.63e-13 70.9
MsG0280010588.01.T01 AT3G58710 43.820 89 49 1 144 231 42 130 3.61e-16 78.6
MsG0280010588.01.T01 AT3G58710 43.820 89 49 1 144 231 43 131 3.77e-16 78.6
MsG0280010588.01.T01 AT1G69310 39.216 102 54 3 130 228 103 199 5.61e-16 78.2
MsG0280010588.01.T01 AT5G52830 50.746 67 33 0 165 231 159 225 6.74e-16 79.0
MsG0280010588.01.T01 AT4G01250 37.143 105 53 1 171 262 128 232 6.96e-16 78.2
MsG0280010588.01.T01 AT4G23550 48.485 66 34 0 166 231 135 200 1.21e-15 77.8
MsG0280010588.01.T01 AT2G34830 44.737 76 41 1 157 231 200 275 3.05e-15 77.8
MsG0280010588.01.T01 AT2G34830 44.737 76 41 1 157 231 209 284 3.53e-15 77.4
MsG0280010588.01.T01 AT1G30650 44.737 76 41 1 157 231 202 277 3.60e-15 77.4
MsG0280010588.01.T01 AT5G43290 40.698 86 48 3 152 235 93 177 8.07e-15 74.7
MsG0280010588.01.T01 AT2G46130 44.872 78 38 2 151 228 10 82 5.47e-14 68.2
MsG0280010588.01.T01 AT4G31800 61.538 39 15 0 170 208 175 213 2.35e-12 67.0
MsG0280010588.01.T01 AT2G46400 41.772 79 44 1 150 226 83 161 3.31e-12 67.4
MsG0280010588.01.T01 AT2G21900 40.909 66 38 1 166 231 104 168 6.82e-12 64.7
MsG0280010588.01.T01 AT5G45050 47.541 61 32 0 171 231 1041 1101 8.68e-12 67.8
MsG0280010588.01.T01 AT3G01080 49.180 61 29 2 171 231 205 263 2.85e-11 64.7
MsG0280010588.01.T01 AT5G45050 50.000 56 28 0 176 231 1185 1240 3.31e-11 66.2
MsG0280010588.01.T01 AT5G45050 50.000 56 28 0 176 231 1157 1212 3.42e-11 65.9

Find 90 sgRNAs with CRISPR-Local

Find 202 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTGGTTCCAAGACAATTTA+TGG 0.128951 2:+71821211 MsG0280010588.01.T01:CDS
ATTGCTCTTGTGAGGTAATT+TGG 0.146915 2:-71823650 None:intergenic
TTTGACTGATCTTGACTTCT+TGG 0.186141 2:-71821275 None:intergenic
GGTTATTAGGGAACTGGTTT+TGG 0.212904 2:-71823757 None:intergenic
CTGCTATTACTTCAATTATT+GGG 0.212910 2:+71823978 MsG0280010588.01.T01:CDS
GCTGCTATTACTTCAATTAT+TGG 0.246668 2:+71823977 MsG0280010588.01.T01:CDS
CTTGATGAGGAGAAACAAAA+TGG 0.281238 2:+71821176 MsG0280010588.01.T01:CDS
AAATGGGAATGGTGGAGTTT+TGG 0.297182 2:+71821193 MsG0280010588.01.T01:CDS
TTGCTCTTGTGAGGTAATTT+GGG 0.310844 2:-71823649 None:intergenic
TTTGGTTTGGTGACTGAGTT+AGG 0.325584 2:-71823739 None:intergenic
AGGGAAATTGGAACTGGTTA+GGG 0.327267 2:-71823781 None:intergenic
ACATGCTTGATGAGGGTAAT+AGG 0.328005 2:+71821057 MsG0280010588.01.T01:CDS
GTTGCTATGCTTGAAGAATA+AGG 0.353526 2:-71823677 None:intergenic
AACAACGGTACGAGCAATAA+TGG 0.356370 2:+71824019 MsG0280010588.01.T01:CDS
GGGAAATTGGAACTGGTTAG+GGG 0.369219 2:-71823780 None:intergenic
CTCGTACCGTTGTTATTGTT+TGG 0.371057 2:-71824010 None:intergenic
GCTAAAGCTGCAGTGAAGTT+AGG 0.387680 2:-71823953 None:intergenic
CCAAGACAATTTATGGAGCT+TGG 0.403211 2:+71821218 MsG0280010588.01.T01:CDS
AAGGGAAATTGGAACTGGTT+AGG 0.406882 2:-71823782 None:intergenic
GGATGTCAATGGAGAAAGTA+TGG 0.409848 2:+71821634 MsG0280010588.01.T01:CDS
TATCGATGCACCATGGCCTT+AGG 0.425405 2:+71821697 MsG0280010588.01.T01:CDS
GAAATTGGAACTGGTTAGGG+GGG 0.429542 2:-71823778 None:intergenic
GAGGGAAGGGAAATTGGAAC+TGG 0.429543 2:-71823787 None:intergenic
TAGCTACTCTACTGAGGAGT+TGG 0.431709 2:-71824122 None:intergenic
TGTACCATTTCCATAGCTGC+TGG 0.431979 2:-71823560 None:intergenic
TGCTTTGCCTCCAGCAGCTA+TGG 0.435611 2:+71823550 MsG0280010588.01.T01:CDS
GCTTGTTCAACATTTGTTTG+AGG 0.439934 2:-71821455 None:intergenic
AGTCCATCAGCACTTGTCAT+TGG 0.447523 2:-71823620 None:intergenic
TCCAATGTAACAGTTGGAAA+TGG 0.451153 2:-71823716 None:intergenic
AGACACAAGTTCTTCAACCT+TGG 0.451540 2:-71821327 None:intergenic
CGATAATAAGCTCGAGGACA+CGG 0.453138 2:-71821679 None:intergenic
ACAATAGCTAATAACACTAA+TGG 0.455086 2:+71824049 MsG0280010588.01.T01:CDS
TCCATTTCCAACTGTTACAT+TGG 0.455513 2:+71823715 MsG0280010588.01.T01:CDS
GCCTCCAGCAGCTATGGAAA+TGG 0.457149 2:+71823556 MsG0280010588.01.T01:CDS
ACAATTTATGGAGCTTGGAT+TGG 0.459747 2:+71821223 MsG0280010588.01.T01:CDS
GGAAATTGGAACTGGTTAGG+GGG 0.470023 2:-71823779 None:intergenic
CCAAGCTCCATAAATTGTCT+TGG 0.475471 2:-71821218 None:intergenic
GAAGAGCAAAAGCAAGTGAT+TGG 0.479656 2:+71821146 MsG0280010588.01.T01:CDS
AACCCTTGCTTTCCTCATAG+TGG 0.482051 2:-71821483 None:intergenic
GCAGATGCATTGGATGAGTA+TGG 0.482506 2:+71821094 MsG0280010588.01.T01:CDS
TGAAAAGAAGGAATCCGATC+GGG 0.482638 2:+71821355 MsG0280010588.01.T01:CDS
TGCTATTACTTCAATTATTG+GGG 0.494301 2:+71823979 MsG0280010588.01.T01:CDS
TGTGTCTGATCATGAAAAGA+AGG 0.508518 2:+71821343 MsG0280010588.01.T01:CDS
GCAGCTAAAACTCGATCTGC+AGG 0.523186 2:-71821398 None:intergenic
GCTGCAAGAATGTTGCTGTC+AGG 0.523499 2:+71823596 MsG0280010588.01.T01:CDS
AGGTTGTCCTGTGAGAAAAC+AGG 0.526028 2:+71821717 MsG0280010588.01.T01:CDS
AGCTCGATCCGAGGCTAACA+TGG 0.526714 2:+71821514 MsG0280010588.01.T01:CDS
ATACTTATCACAACATATGA+AGG 0.527047 2:+71823515 MsG0280010588.01.T01:CDS
AGCTACTCTACTGAGGAGTT+GGG 0.528777 2:-71824121 None:intergenic
GATAATAAGCTCGAGGACAC+GGG 0.530098 2:-71821678 None:intergenic
ACAACACATTGCAGATGCAT+TGG 0.536029 2:+71821084 MsG0280010588.01.T01:CDS
GAGAAAGTATGGACAGAAGA+TGG 0.537071 2:+71821645 MsG0280010588.01.T01:CDS
GGACCAATGACAAGTGCTGA+TGG 0.540715 2:+71823617 MsG0280010588.01.T01:CDS
TTGATGAGGAGAAACAAAAT+GGG 0.547963 2:+71821177 MsG0280010588.01.T01:CDS
GAGAAACAAAATGGGAATGG+TGG 0.550957 2:+71821185 MsG0280010588.01.T01:CDS
CATAATTTGCACAGGTACAA+AGG 0.556634 2:+71823474 MsG0280010588.01.T01:intron
AGATCAATGATGGATGTCAA+TGG 0.557548 2:+71821623 MsG0280010588.01.T01:intron
CTGAGGAACATGCTTGATGA+GGG 0.560805 2:+71821050 MsG0280010588.01.T01:CDS
GAGTATGGTGCAAGACAAGA+AGG 0.561536 2:+71821109 MsG0280010588.01.T01:CDS
GAGCAAAAGCAAGTGATTGG+TGG 0.565607 2:+71821149 MsG0280010588.01.T01:CDS
GTTAGGTCCAATGTAACAGT+TGG 0.567146 2:-71823722 None:intergenic
ATGAAAAGAAGGAATCCGAT+CGG 0.570044 2:+71821354 MsG0280010588.01.T01:CDS
AGGCCACTATGAGGAAAGCA+AGG 0.570684 2:+71821480 MsG0280010588.01.T01:CDS
ACATCAAGTAACAATACCAT+TGG 0.571515 2:+71824079 MsG0280010588.01.T01:CDS
TAACAATGAGGAAGATTCCA+AGG 0.572334 2:+71821310 MsG0280010588.01.T01:CDS
CACAGGACAACCTAAGGCCA+TGG 0.587201 2:-71821707 None:intergenic
CTATGCTTGAAGAATAAGGA+AGG 0.594569 2:-71823673 None:intergenic
GGTGCAAGACAAGAAGGTAG+AGG 0.597094 2:+71821115 MsG0280010588.01.T01:CDS
GAAGTGTACCATGTTAGCCT+CGG 0.600264 2:-71821522 None:intergenic
AACAAGCTGAGGCCACTATG+AGG 0.607043 2:+71821471 MsG0280010588.01.T01:CDS
ACTGAGGAACATGCTTGATG+AGG 0.611969 2:+71821049 MsG0280010588.01.T01:CDS
AACAAATGTTGAACAAGCTG+AGG 0.613373 2:+71821460 MsG0280010588.01.T01:CDS
AAGGAAGGATTGCTCTTGTG+AGG 0.621106 2:-71823658 None:intergenic
TAGCATTAACTGTGTCAGCA+AGG 0.623284 2:-71823919 None:intergenic
CGAGCTTGAGAGAATGAAGG+TGG 0.635577 2:+71821016 None:intergenic
ACCATTTCCATAGCTGCTGG+AGG 0.637423 2:-71823557 None:intergenic
GAGGAGAAACAAAATGGGAA+TGG 0.637776 2:+71821182 MsG0280010588.01.T01:CDS
TATGGACAGAAGATGGCGAA+AGG 0.642826 2:+71821652 MsG0280010588.01.T01:CDS
TTCAGTTAGAGCTCGATCCG+AGG 0.654330 2:+71821505 MsG0280010588.01.T01:CDS
GGCCACTATGAGGAAAGCAA+GGG 0.654709 2:+71821481 MsG0280010588.01.T01:CDS
ATTACTTGCAAATAACAATG+AGG 0.658433 2:+71821298 MsG0280010588.01.T01:CDS
AGCTTATTATCGATGCACCA+TGG 0.661870 2:+71821690 MsG0280010588.01.T01:CDS
GAAAAGAAGGAATCCGATCG+GGG 0.662543 2:+71821356 MsG0280010588.01.T01:CDS
ACTGTGTCAGCAAGGTTCTG+TGG 0.667152 2:-71823911 None:intergenic
GATTGGTGGAAAACTTGATG+AGG 0.667331 2:+71821163 MsG0280010588.01.T01:CDS
GTGCATCGATAATAAGCTCG+AGG 0.678750 2:-71821685 None:intergenic
GTGGGCTAGCTACTCTACTG+AGG 0.703692 2:-71824128 None:intergenic
AGGTGGAGAATCATCAACTG+AGG 0.706865 2:+71821033 MsG0280010588.01.T01:CDS
GCACAGCCAAACAATAACAA+CGG 0.716964 2:+71824004 MsG0280010588.01.T01:CDS
AATGTCTGACCAAATACCTG+AGG 0.730527 2:-71823821 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTTCAAAAAAAAAATGAAAT+TGG - Chr2:71822770-71822789 None:intergenic 10.0%
!! AATAAAGACAAAAGATAATT+TGG + Chr2:71822566-71822585 MsG0280010588.01.T01:intron 15.0%
!! CATCTTAAAAATAAAAATGA+CGG - Chr2:71822743-71822762 None:intergenic 15.0%
!!! ACTTTTTTTTGTAAACATTT+TGG + Chr2:71823006-71823025 MsG0280010588.01.T01:intron 15.0%
!!! GTCATTTTTATTTTTAAGAT+GGG + Chr2:71822742-71822761 MsG0280010588.01.T01:intron 15.0%
!!! TAATTTCAGTAAACTTTTTT+AGG - Chr2:71823115-71823134 None:intergenic 15.0%
!!! TAATTTCTATAAACTTTTTC+AGG - Chr2:71822174-71822193 None:intergenic 15.0%
!! AAAAGATAATTTGGACATTA+GGG + Chr2:71822575-71822594 MsG0280010588.01.T01:intron 20.0%
!! TAAATGTTAGCTATAATAGT+TGG + Chr2:71821754-71821773 MsG0280010588.01.T01:intron 20.0%
!! TATACAAACACGTTTAAAAA+AGG - Chr2:71822906-71822925 None:intergenic 20.0%
!! TGTTTATATTGTCATTAAAC+TGG + Chr2:71822432-71822451 MsG0280010588.01.T01:intron 20.0%
!! TTTAAACGTGTTTGTATAAA+TGG + Chr2:71822908-71822927 MsG0280010588.01.T01:intron 20.0%
!!! CGTCATTTTTATTTTTAAGA+TGG + Chr2:71822741-71822760 MsG0280010588.01.T01:intron 20.0%
!!! CTGTTTTATATTGACTTATT+TGG - Chr2:71822270-71822289 None:intergenic 20.0%
!!! GTTACTGTAGTTTAATATTT+TGG - Chr2:71822316-71822335 None:intergenic 20.0%
!!! TAACTTTTTATTTAGAGCTT+AGG + Chr2:71822794-71822813 MsG0280010588.01.T01:intron 20.0%
!!! TAATTCGGGTTTTATAAAAA+TGG - Chr2:71823404-71823423 None:intergenic 20.0%
!!! TTATATCTTCCATTTTATTC+TGG - Chr2:71822388-71822407 None:intergenic 20.0%
!!! TTTTTTTGTAAACATTTTGG+TGG + Chr2:71823009-71823028 MsG0280010588.01.T01:intron 20.0%
! AAAGACTTATGAGACTATTT+GGG - Chr2:71822231-71822250 None:intergenic 25.0%
! AAAGATAATTTGGACATTAG+GGG + Chr2:71822576-71822595 MsG0280010588.01.T01:intron 25.0%
! AAGTTGAAATTCGCTTATTA+TGG - Chr2:71822990-71823009 None:intergenic 25.0%
! AATTACCTGAAATGAGTTTA+TGG + Chr2:71823130-71823149 MsG0280010588.01.T01:intron 25.0%
! ACAATAGCTAATAACACTAA+TGG + Chr2:71824049-71824068 MsG0280010588.01.T01:CDS 25.0%
! ACGTTTAAAAAAGGTAGAAA+AGG - Chr2:71822897-71822916 None:intergenic 25.0%
! AGTTGAAATTCGCTTATTAT+GGG - Chr2:71822989-71823008 None:intergenic 25.0%
! ATACTTATCACAACATATGA+AGG + Chr2:71823515-71823534 MsG0280010588.01.T01:CDS 25.0%
! ATCAAAAAAATTGAGCAATG+TGG - Chr2:71822630-71822649 None:intergenic 25.0%
! ATTACTTGCAAATAACAATG+AGG + Chr2:71821298-71821317 MsG0280010588.01.T01:CDS 25.0%
! CAAAAGATAATTTGGACATT+AGG + Chr2:71822574-71822593 MsG0280010588.01.T01:intron 25.0%
! CAATAATATCCAATCAATCA+TGG + Chr2:71821984-71822003 MsG0280010588.01.T01:intron 25.0%
! CTGCTATTACTTCAATTATT+GGG + Chr2:71823978-71823997 MsG0280010588.01.T01:CDS 25.0%
! TAAAACTGTTTATCCAAACA+TGG - Chr2:71822044-71822063 None:intergenic 25.0%
! TAGGTTTATACGCATTATTT+GGG + Chr2:71822813-71822832 MsG0280010588.01.T01:intron 25.0%
! TCAAAAAAATTGAGCAATGT+GGG - Chr2:71822629-71822648 None:intergenic 25.0%
! TCGATATAATCAAACTCTTA+AGG - Chr2:71822518-71822537 None:intergenic 25.0%
! TGCTATTACTTCAATTATTG+GGG + Chr2:71823979-71823998 MsG0280010588.01.T01:CDS 25.0%
! TTAGGTTTATACGCATTATT+TGG + Chr2:71822812-71822831 MsG0280010588.01.T01:intron 25.0%
! TTATATCGATGCTTGTTTAA+CGG + Chr2:71822529-71822548 MsG0280010588.01.T01:intron 25.0%
! TTATATTGTCATTAAACTGG+AGG + Chr2:71822435-71822454 MsG0280010588.01.T01:intron 25.0%
! TTTATAAAAATGGTTCACGA+CGG - Chr2:71823394-71823413 None:intergenic 25.0%
!! ACAGCTTGATAACTTTAATT+CGG - Chr2:71823419-71823438 None:intergenic 25.0%
!! GAAGAATGAAATGTTTGTTT+TGG + Chr2:71821563-71821582 MsG0280010588.01.T01:intron 25.0%
!! GACAATATAAACATGCTTTT+AGG - Chr2:71822425-71822444 None:intergenic 25.0%
!! GGATTACTACAATTGTATTT+TGG - Chr2:71822967-71822986 None:intergenic 25.0%
!! TTGAACCAATCAAAATTTTC+AGG + Chr2:71823845-71823864 MsG0280010588.01.T01:CDS 25.0%
!!! GCTCAATTTTTTTGATTGTT+TGG + Chr2:71822634-71822653 MsG0280010588.01.T01:intron 25.0%
AAGATAATTTGGACATTAGG+GGG + Chr2:71822577-71822596 MsG0280010588.01.T01:intron 30.0%
AAGCACTATTGAGACTATTT+GGG - Chr2:71823171-71823190 None:intergenic 30.0%
AATTACCTGAAAAGAGCTTA+TGG + Chr2:71822189-71822208 MsG0280010588.01.T01:intron 30.0%
ACACTCAAACCAGAATAAAA+TGG + Chr2:71822376-71822395 MsG0280010588.01.T01:intron 30.0%
ACATCAAGTAACAATACCAT+TGG + Chr2:71824079-71824098 MsG0280010588.01.T01:CDS 30.0%
AGCATGCATATAAGATCAAT+TGG - Chr2:71821867-71821886 None:intergenic 30.0%
ATTACCTGAAAAGAGCTTAT+GGG + Chr2:71822190-71822209 MsG0280010588.01.T01:intron 30.0%
CAAAGACTTATGAGACTATT+TGG - Chr2:71822232-71822251 None:intergenic 30.0%
GAAAACTCTCATTATTTCAG+AGG + Chr2:71822672-71822691 MsG0280010588.01.T01:intron 30.0%
GCTGCTATTACTTCAATTAT+TGG + Chr2:71823977-71823996 MsG0280010588.01.T01:CDS 30.0%
GTTGAAATTCGCTTATTATG+GGG - Chr2:71822988-71823007 None:intergenic 30.0%
TAAGCACTATTGAGACTATT+TGG - Chr2:71823172-71823191 None:intergenic 30.0%
TTGATGAGGAGAAACAAAAT+GGG + Chr2:71821177-71821196 MsG0280010588.01.T01:CDS 30.0%
! CAGCTTGATAACTTTAATTC+GGG - Chr2:71823418-71823437 None:intergenic 30.0%
! CTTTTGTATCAGATCAATGA+TGG + Chr2:71821613-71821632 MsG0280010588.01.T01:intron 30.0%
! TTTGGTTCCAAGACAATTTA+TGG + Chr2:71821211-71821230 MsG0280010588.01.T01:CDS 30.0%
!! GAAGTCCTGAAAATTTTGAT+TGG - Chr2:71823853-71823872 None:intergenic 30.0%
!!! AGTTGGGATTGTTGATTTTA+GGG - Chr2:71824108-71824127 None:intergenic 30.0%
!!! TTTTTTACGTCTCTATGCTA+AGG - Chr2:71823342-71823361 None:intergenic 30.0%
AAACATGTGCCATGATTGAT+TGG - Chr2:71821996-71822015 None:intergenic 35.0%
AACAAATGTTGAACAAGCTG+AGG + Chr2:71821460-71821479 MsG0280010588.01.T01:CDS 35.0%
ACAATTTATGGAGCTTGGAT+TGG + Chr2:71821223-71821242 MsG0280010588.01.T01:CDS 35.0%
ACATGCCATAAACTCATTTC+AGG - Chr2:71823138-71823157 None:intergenic 35.0%
ACCAAATCATTGGACTCAAA+TGG - Chr2:71823045-71823064 None:intergenic 35.0%
ACCATTTGAGTCCAATGATT+TGG + Chr2:71823041-71823060 MsG0280010588.01.T01:intron 35.0%
ACTACAGTAACAACCAAAGT+CGG + Chr2:71822325-71822344 MsG0280010588.01.T01:intron 35.0%
ACTTTGACCAACCAAATCAT+TGG - Chr2:71823055-71823074 None:intergenic 35.0%
ATGAAAAGAAGGAATCCGAT+CGG + Chr2:71821354-71821373 MsG0280010588.01.T01:CDS 35.0%
ATTGCTCTTGTGAGGTAATT+TGG - Chr2:71823653-71823672 None:intergenic 35.0%
ATTGTCATTAAACTGGAGGT+TGG + Chr2:71822439-71822458 MsG0280010588.01.T01:intron 35.0%
CTATGCTTGAAGAATAAGGA+AGG - Chr2:71823676-71823695 None:intergenic 35.0%
CTTGATGAGGAGAAACAAAA+TGG + Chr2:71821176-71821195 MsG0280010588.01.T01:CDS 35.0%
CTTTGTACCTGTGCAAATTA+TGG - Chr2:71823476-71823495 None:intergenic 35.0%
GCTTGTTCAACATTTGTTTG+AGG - Chr2:71821458-71821477 None:intergenic 35.0%
GGCACTGTTATAATATGTCA+TGG + Chr2:71821784-71821803 MsG0280010588.01.T01:intron 35.0%
GTTGCTATGCTTGAAGAATA+AGG - Chr2:71823680-71823699 None:intergenic 35.0%
TAACAATGAGGAAGATTCCA+AGG + Chr2:71821310-71821329 MsG0280010588.01.T01:CDS 35.0%
TATAAAACAGACCCCTAATG+AGG + Chr2:71822280-71822299 MsG0280010588.01.T01:intron 35.0%
TCCAATGTAACAGTTGGAAA+TGG - Chr2:71823719-71823738 None:intergenic 35.0%
TCCATTTCCAACTGTTACAT+TGG + Chr2:71823715-71823734 MsG0280010588.01.T01:CDS 35.0%
TGTGTCTGATCATGAAAAGA+AGG + Chr2:71821343-71821362 MsG0280010588.01.T01:CDS 35.0%
TTGCTCTTGTGAGGTAATTT+GGG - Chr2:71823652-71823671 None:intergenic 35.0%
TTTGACTGATCTTGACTTCT+TGG - Chr2:71821278-71821297 None:intergenic 35.0%
! AATTTTCTGCCTCAGGTATT+TGG + Chr2:71823812-71823831 MsG0280010588.01.T01:CDS 35.0%
! ACATGTACCATAATTTGCAC+AGG + Chr2:71823466-71823485 MsG0280010588.01.T01:intron 35.0%
! AGCTTGAGATTGATTTAGCT+AGG + Chr2:71821948-71821967 MsG0280010588.01.T01:intron 35.0%
! CATAATTTGCACAGGTACAA+AGG + Chr2:71823474-71823493 MsG0280010588.01.T01:intron 35.0%
! TAACATACCTGTTTTCTCAC+AGG - Chr2:71821727-71821746 None:intergenic 35.0%
! TAGTAGAAGTACATGAGCTA+TGG - Chr2:71821916-71821935 None:intergenic 35.0%
! TCAAACTCTTAAGGTGCTTT+CGG - Chr2:71822509-71822528 None:intergenic 35.0%
!! AATTTTGAGGGAAGGGAAAT+TGG - Chr2:71823796-71823815 None:intergenic 35.0%
!! AGATCAATGATGGATGTCAA+TGG + Chr2:71821623-71821642 MsG0280010588.01.T01:intron 35.0%
!! TTTGAGTCCAATGATTTGGT+TGG + Chr2:71823045-71823064 MsG0280010588.01.T01:intron 35.0%
!!! GAGTTGGGATTGTTGATTTT+AGG - Chr2:71824109-71824128 None:intergenic 35.0%
AACAACGGTACGAGCAATAA+TGG + Chr2:71824019-71824038 MsG0280010588.01.T01:CDS 40.0%
AAGGGAAATTGGAACTGGTT+AGG - Chr2:71823785-71823804 None:intergenic 40.0%
AATGTCTGACCAAATACCTG+AGG - Chr2:71823824-71823843 None:intergenic 40.0%
ACAACACATTGCAGATGCAT+TGG + Chr2:71821084-71821103 MsG0280010588.01.T01:CDS 40.0%
ACATGCTTGATGAGGGTAAT+AGG + Chr2:71821057-71821076 MsG0280010588.01.T01:CDS 40.0%
ACTAAAACAGACCCCTAATG+AGG + Chr2:71823220-71823239 MsG0280010588.01.T01:intron 40.0%
ACTGAAGTAACGACCAAAGT+CGG + Chr2:71823265-71823284 MsG0280010588.01.T01:intron 40.0%
ACTTCAACCTACCTCATTAG+GGG - Chr2:71823234-71823253 None:intergenic 40.0%
AGACACAAGTTCTTCAACCT+TGG - Chr2:71821330-71821349 None:intergenic 40.0%
AGCTTATTATCGATGCACCA+TGG + Chr2:71821690-71821709 MsG0280010588.01.T01:CDS 40.0%
AGGGAAATTGGAACTGGTTA+GGG - Chr2:71823784-71823803 None:intergenic 40.0%
CAGAGTTGAGAACTCAAAAC+AGG - Chr2:71821829-71821848 None:intergenic 40.0%
CCAAGACAATTTATGGAGCT+TGG + Chr2:71821218-71821237 MsG0280010588.01.T01:CDS 40.0%
CCAAGCTCCATAAATTGTCT+TGG - Chr2:71821221-71821240 None:intergenic 40.0%
CTACAGTAACAACCAAAGTC+GGG + Chr2:71822326-71822345 MsG0280010588.01.T01:intron 40.0%
GAAGAGCAAAAGCAAGTGAT+TGG + Chr2:71821146-71821165 MsG0280010588.01.T01:CDS 40.0%
GACTTCAACCTACCTCATTA+GGG - Chr2:71823235-71823254 None:intergenic 40.0%
GAGAAACAAAATGGGAATGG+TGG + Chr2:71821185-71821204 MsG0280010588.01.T01:CDS 40.0%
GAGGAGAAACAAAATGGGAA+TGG + Chr2:71821182-71821201 MsG0280010588.01.T01:CDS 40.0%
GATTGGTGGAAAACTTGATG+AGG + Chr2:71821163-71821182 MsG0280010588.01.T01:CDS 40.0%
GCACAGCCAAACAATAACAA+CGG + Chr2:71824004-71824023 MsG0280010588.01.T01:CDS 40.0%
GGATGTCAATGGAGAAAGTA+TGG + Chr2:71821634-71821653 MsG0280010588.01.T01:CDS 40.0%
GTCTTCAACATTTCGATGCT+AGG + Chr2:71822018-71822037 MsG0280010588.01.T01:intron 40.0%
GTTAGGTCCAATGTAACAGT+TGG - Chr2:71823725-71823744 None:intergenic 40.0%
TAGCATTAACTGTGTCAGCA+AGG - Chr2:71823922-71823941 None:intergenic 40.0%
TGAAAAGAAGGAATCCGATC+GGG + Chr2:71821355-71821374 MsG0280010588.01.T01:CDS 40.0%
TGACTTCAACCTACCTCATT+AGG - Chr2:71823236-71823255 None:intergenic 40.0%
! AACTGGAGGTTGGAGTTTTA+AGG + Chr2:71822449-71822468 MsG0280010588.01.T01:intron 40.0%
! ACCTGAGGCAGAAAATTTTG+AGG - Chr2:71823809-71823828 None:intergenic 40.0%
! CCTGAGGCAGAAAATTTTGA+GGG - Chr2:71823808-71823827 None:intergenic 40.0%
! CTCGTACCGTTGTTATTGTT+TGG - Chr2:71824013-71824032 None:intergenic 40.0%
! GAGAAAGTATGGACAGAAGA+TGG + Chr2:71821645-71821664 MsG0280010588.01.T01:CDS 40.0%
! TTTTCTCACAGGACAACCTA+AGG - Chr2:71821716-71821735 None:intergenic 40.0%
!! AAATGGGAATGGTGGAGTTT+TGG + Chr2:71821193-71821212 MsG0280010588.01.T01:CDS 40.0%
!! AGGCAGAAAATTTTGAGGGA+AGG - Chr2:71823804-71823823 None:intergenic 40.0%
!! GCTATAATAGTTGGTGACAC+AGG + Chr2:71821763-71821782 MsG0280010588.01.T01:intron 40.0%
!! GGCAGAAAATTTTGAGGGAA+GGG - Chr2:71823803-71823822 None:intergenic 40.0%
!! GGTTATTAGGGAACTGGTTT+TGG - Chr2:71823760-71823779 None:intergenic 40.0%
!! TTTGGTTTGGTGACTGAGTT+AGG - Chr2:71823742-71823761 None:intergenic 40.0%
!!! GTTGATTTTAGGGCTTCCAA+TGG - Chr2:71824098-71824117 None:intergenic 40.0%
!!! TTAGGGAACTGGTTTTGGTT+TGG - Chr2:71823755-71823774 None:intergenic 40.0%
AAACAGACCCCTAATGAGGT+AGG + Chr2:71822284-71822303 MsG0280010588.01.T01:intron 45.0%
AACCCTTGCTTTCCTCATAG+TGG - Chr2:71821486-71821505 None:intergenic 45.0%
AACTGGTTAGGGGGGTTATT+AGG - Chr2:71823773-71823792 None:intergenic 45.0%
AAGGAAGGATTGCTCTTGTG+AGG - Chr2:71823661-71823680 None:intergenic 45.0%
ACCTGAAAAGAGCTTATGGG+TGG + Chr2:71822193-71822212 MsG0280010588.01.T01:intron 45.0%
ACTGAGGAACATGCTTGATG+AGG + Chr2:71821049-71821068 MsG0280010588.01.T01:CDS 45.0%
ACTGGTTAGGGGGGTTATTA+GGG - Chr2:71823772-71823791 None:intergenic 45.0%
AGGTGGAGAATCATCAACTG+AGG + Chr2:71821033-71821052 MsG0280010588.01.T01:CDS 45.0%
AGGTTGTCCTGTGAGAAAAC+AGG + Chr2:71821717-71821736 MsG0280010588.01.T01:CDS 45.0%
AGTCCATCAGCACTTGTCAT+TGG - Chr2:71823623-71823642 None:intergenic 45.0%
CAAGAATTGTGACCCGACTT+TGG - Chr2:71823281-71823300 None:intergenic 45.0%
CCTGAAAAGAGCTTATGGGT+GGG + Chr2:71822194-71822213 MsG0280010588.01.T01:intron 45.0%
CGATAATAAGCTCGAGGACA+CGG - Chr2:71821682-71821701 None:intergenic 45.0%
CTGAAGTAACGACCAAAGTC+GGG + Chr2:71823266-71823285 MsG0280010588.01.T01:intron 45.0%
CTGAGGAACATGCTTGATGA+GGG + Chr2:71821050-71821069 MsG0280010588.01.T01:CDS 45.0%
GAAAAGAAGGAATCCGATCG+GGG + Chr2:71821356-71821375 MsG0280010588.01.T01:CDS 45.0%
GAAATTGGAACTGGTTAGGG+GGG - Chr2:71823781-71823800 None:intergenic 45.0%
GAGCAAAAGCAAGTGATTGG+TGG + Chr2:71821149-71821168 MsG0280010588.01.T01:CDS 45.0%
GAGTATGGTGCAAGACAAGA+AGG + Chr2:71821109-71821128 MsG0280010588.01.T01:CDS 45.0%
GATAATAAGCTCGAGGACAC+GGG - Chr2:71821681-71821700 None:intergenic 45.0%
GCAGATGCATTGGATGAGTA+TGG + Chr2:71821094-71821113 MsG0280010588.01.T01:CDS 45.0%
GCTAAAGCTGCAGTGAAGTT+AGG - Chr2:71823956-71823975 None:intergenic 45.0%
GCTTCAACCTACCTCATTAG+GGG - Chr2:71822294-71822313 None:intergenic 45.0%
GGAAATTGGAACTGGTTAGG+GGG - Chr2:71823782-71823801 None:intergenic 45.0%
GGCTTCAACCTACCTCATTA+GGG - Chr2:71822295-71822314 None:intergenic 45.0%
GGGAAATTGGAACTGGTTAG+GGG - Chr2:71823783-71823802 None:intergenic 45.0%
TATGGACAGAAGATGGCGAA+AGG + Chr2:71821652-71821671 MsG0280010588.01.T01:CDS 45.0%
TGGCTTCAACCTACCTCATT+AGG - Chr2:71822296-71822315 None:intergenic 45.0%
TGTACCATTTCCATAGCTGC+TGG - Chr2:71823563-71823582 None:intergenic 45.0%
TTTCGATGCTAGGCCATGTT+TGG + Chr2:71822028-71822047 MsG0280010588.01.T01:intron 45.0%
! CCCTCAAAATTTTCTGCCTC+AGG + Chr2:71823805-71823824 MsG0280010588.01.T01:CDS 45.0%
! GAAGTGTACCATGTTAGCCT+CGG - Chr2:71821525-71821544 None:intergenic 45.0%
! GCTTCTTTCTTTTCCCCGAT+CGG - Chr2:71821372-71821391 None:intergenic 45.0%
! GTGCATCGATAATAAGCTCG+AGG - Chr2:71821688-71821707 None:intergenic 45.0%
AACAAGCTGAGGCCACTATG+AGG + Chr2:71821471-71821490 MsG0280010588.01.T01:CDS 50.0%
ACCATTTCCATAGCTGCTGG+AGG - Chr2:71823560-71823579 None:intergenic 50.0%
ACTGTGTCAGCAAGGTTCTG+TGG - Chr2:71823914-71823933 None:intergenic 50.0%
AGGCCACTATGAGGAAAGCA+AGG + Chr2:71821480-71821499 MsG0280010588.01.T01:CDS 50.0%
GAGGGAAGGGAAATTGGAAC+TGG - Chr2:71823790-71823809 None:intergenic 50.0%
GCAGCTAAAACTCGATCTGC+AGG - Chr2:71821401-71821420 None:intergenic 50.0%
GCTGCAAGAATGTTGCTGTC+AGG + Chr2:71823596-71823615 MsG0280010588.01.T01:CDS 50.0%
GGCCACTATGAGGAAAGCAA+GGG + Chr2:71821481-71821500 MsG0280010588.01.T01:CDS 50.0%
GGTGCAAGACAAGAAGGTAG+AGG + Chr2:71821115-71821134 MsG0280010588.01.T01:CDS 50.0%
TAGGGGGGTTATTAGGGAAC+TGG - Chr2:71823766-71823785 None:intergenic 50.0%
TATCGATGCACCATGGCCTT+AGG + Chr2:71821697-71821716 MsG0280010588.01.T01:CDS 50.0%
TTCAGTTAGAGCTCGATCCG+AGG + Chr2:71821505-71821524 MsG0280010588.01.T01:CDS 50.0%
! CAAGAAGTACGACCCGACTT+TGG - Chr2:71822341-71822360 None:intergenic 50.0%
! CCCACCCATAAGCTCTTTTC+AGG - Chr2:71822197-71822216 None:intergenic 50.0%
!! ACATTAGGGGGTGCTTGTAG+CGG + Chr2:71822589-71822608 MsG0280010588.01.T01:intron 50.0%
!! GGACCAATGACAAGTGCTGA+TGG + Chr2:71823617-71823636 MsG0280010588.01.T01:CDS 50.0%
AGCTCGATCCGAGGCTAACA+TGG + Chr2:71821514-71821533 MsG0280010588.01.T01:CDS 55.0%
AGGATGCGAGGGTGACATCA+TGG - Chr2:71823365-71823384 None:intergenic 55.0%
ATGGTTCACGACGGTGACCT+AGG - Chr2:71823385-71823404 None:intergenic 55.0%
CACAGGACAACCTAAGGCCA+TGG - Chr2:71821710-71821729 None:intergenic 55.0%
GCCTCCAGCAGCTATGGAAA+TGG + Chr2:71823556-71823575 MsG0280010588.01.T01:CDS 55.0%
TGATGTCACCCTCGCATCCT+AGG + Chr2:71823365-71823384 MsG0280010588.01.T01:intron 55.0%
TGCTTTGCCTCCAGCAGCTA+TGG + Chr2:71823550-71823569 MsG0280010588.01.T01:CDS 55.0%
GACGGTGACCTAGGATGCGA+GGG - Chr2:71823376-71823395 None:intergenic 60.0%
!! AGGGGGTGCTTGTAGCGGAT+AGG + Chr2:71822594-71822613 MsG0280010588.01.T01:intron 60.0%
CGACGGTGACCTAGGATGCG+AGG - Chr2:71823377-71823396 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
Chr2 gene 71821029 71824141 71821029 ID=MsG0280010588.01;Name=MsG0280010588.01
Chr2 mRNA 71821029 71824141 71821029 ID=MsG0280010588.01.T01;Parent=MsG0280010588.01;Name=MsG0280010588.01.T01;_AED=0.22;_eAED=0.22;_QI=0|0|0|1|1|1|3|0|424
Chr2 exon 71821029 71821535 71821029 ID=MsG0280010588.01.T01:exon:15178;Parent=MsG0280010588.01.T01
Chr2 exon 71821625 71821738 71821625 ID=MsG0280010588.01.T01:exon:15179;Parent=MsG0280010588.01.T01
Chr2 exon 71823488 71824141 71823488 ID=MsG0280010588.01.T01:exon:15180;Parent=MsG0280010588.01.T01
Chr2 CDS 71821029 71821535 71821029 ID=MsG0280010588.01.T01:cds;Parent=MsG0280010588.01.T01
Chr2 CDS 71821625 71821738 71821625 ID=MsG0280010588.01.T01:cds;Parent=MsG0280010588.01.T01
Chr2 CDS 71823488 71824141 71823488 ID=MsG0280010588.01.T01:cds;Parent=MsG0280010588.01.T01
Gene Sequence

>MsG0280010588.01.T01

ATGAAGGTGGAGAATCATCAACTGAGGAACATGCTTGATGAGGGTAATAGGAAGTACAACACATTGCAGATGCATTGGATGAGTATGGTGCAAGACAAGAAGGTAGAGGATTGTAATGAAGAGCAAAAGCAAGTGATTGGTGGAAAACTTGATGAGGAGAAACAAAATGGGAATGGTGGAGTTTTGGTTCCAAGACAATTTATGGAGCTTGGATTGGCTGCAAATAATTCTGATGCTATTGATGAACCAAGAAGTCAAGATCAGTCAAAATTACTTGCAAATAACAATGAGGAAGATTCCAAGGTTGAAGAACTTGTGTCTGATCATGAAAAGAAGGAATCCGATCGGGGAAAAGAAAGAAGCAGTAGTCCTGCAGATCGAGTTTTAGCTGCTAATAATACTAATAATAATGTTGCAAACTTTAGTCCTCAAACAAATGTTGAACAAGCTGAGGCCACTATGAGGAAAGCAAGGGTTTCAGTTAGAGCTCGATCCGAGGCTAACATGATCAATGATGGATGTCAATGGAGAAAGTATGGACAGAAGATGGCGAAAGGAAACCCGTGTCCTCGAGCTTATTATCGATGCACCATGGCCTTAGGTTGTCCTGTGAGAAAACAGGTACAAAGGTGTGCTGAAGACAAAACAATACTTATCACAACATATGAAGGACATCACATTCATGCTTTGCCTCCAGCAGCTATGGAAATGGTACAAACAACATCATCAGCTGCAAGAATGTTGCTGTCAGGACCAATGACAAGTGCTGATGGACTAATGAACCCAAATTACCTCACAAGAGCAATCCTTCCTTATTCTTCAAGCATAGCAACTATCTCAGCATCAGCTCCATTTCCAACTGTTACATTGGACCTAACTCAGTCACCAAACCAAAACCAGTTCCCTAATAACCCCCCTAACCAGTTCCAATTTCCCTTCCCTCAAAATTTTCTGCCTCAGGTATTTGGTCAGACATTGTTGAACCAATCAAAATTTTCAGGACTTCAAATGTCTCAAGATGCAGCAAACAGTTCTCAGCAGACACCACAGAACCTTGCTGACACAGTTAATGCTATTGCAGCTGATCCTAACTTCACTGCAGCTTTAGCAGCTGCTATTACTTCAATTATTGGGGCTGCACAGCCAAACAATAACAACGGTACGAGCAATAATGGTAACAGTACAATAGCTAATAACACTAATGGCAATGTTACATCAAGTAACAATACCATTGGAAGCCCTAAAATCAACAATCCCAACTCCTCAGTAGAGTAG
Protein sequence

>MsG0280010588.01.T01

MKVENHQLRNMLDEGNRKYNTLQMHWMSMVQDKKVEDCNEEQKQVIGGKLDEEKQNGNGGVLVPRQFMELGLAANNSDAIDEPRSQDQSKLLANNNEEDSKVEELVSDHEKKESDRGKERSSSPADRVLAANNTNNNVANFSPQTNVEQAEATMRKARVSVRARSEANMINDGCQWRKYGQKMAKGNPCPRAYYRCTMALGCPVRKQVQRCAEDKTILITTYEGHHIHALPPAAMEMVQTTSSAARMLLSGPMTSADGLMNPNYLTRAILPYSSSIATISASAPFPTVTLDLTQSPNQNQFPNNPPNQFQFPFPQNFLPQVFGQTLLNQSKFSGLQMSQDAANSSQQTPQNLADTVNAIAADPNFTAALAAAITSIIGAAQPNNNNGTSNNGNSTIANNTNGNVTSSNNTIGSPKINNPNSSVE*