AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0280010619.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280010619.01.T01 MTR_2g088900 88.500 200 17 1 60 259 102 295 1.78e-124 370
MsG0280010619.01.T01 MTR_2g088900 94.268 157 8 1 259 414 365 521 8.61e-99 304
MsG0280010619.01.T01 MTR_5g069480 49.074 108 53 1 73 178 13 120 8.35e-27 111
MsG0280010619.01.T01 MTR_5g069480 47.059 102 51 2 312 410 303 404 1.75e-12 68.9
MsG0280010619.01.T01 MTR_5g069480 49.074 108 53 1 73 178 13 120 9.21e-27 108
MsG0280010619.01.T01 MTR_3g082630 51.020 98 47 1 73 169 13 110 4.67e-25 106
MsG0280010619.01.T01 MTR_3g082630 47.664 107 43 3 313 410 303 405 4.21e-19 89.0
MsG0280010619.01.T01 MTR_1g109350 43.333 90 50 1 75 164 15 103 2.43e-16 80.1
MsG0280010619.01.T01 MTR_7g108150 43.333 90 50 1 75 163 30 119 4.92e-16 79.3
MsG0280010619.01.T01 MTR_7g083540 40.625 96 49 1 73 160 13 108 7.15e-15 76.3
MsG0280010619.01.T01 MTR_7g083540 73.333 45 12 0 360 404 341 385 6.09e-13 70.1
MsG0280010619.01.T01 MTR_3g105710 42.667 75 43 0 71 145 12 86 4.22e-11 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280010619.01.T01 AT3G21880 37.110 353 194 7 75 409 15 357 2.13e-61 203
MsG0280010619.01.T01 AT3G21880 37.110 353 194 7 75 409 19 361 2.61e-61 202
MsG0280010619.01.T01 AT3G21880 37.110 353 194 7 75 409 19 361 2.61e-61 202
MsG0280010619.01.T01 AT4G15250 36.339 366 152 10 75 411 15 328 6.78e-56 187
MsG0280010619.01.T01 AT5G48250 34.146 369 198 11 73 410 13 367 1.49e-48 169
MsG0280010619.01.T01 AT3G07650 33.159 383 182 13 73 410 13 366 1.48e-46 164
MsG0280010619.01.T01 AT3G07650 33.159 383 182 13 73 410 13 366 1.48e-46 164
MsG0280010619.01.T01 AT3G07650 33.159 383 182 13 73 410 13 366 1.48e-46 164
MsG0280010619.01.T01 AT3G07650 33.159 383 182 13 73 410 13 366 1.48e-46 164
MsG0280010619.01.T01 AT2G47890 29.775 356 185 10 71 404 19 331 4.24e-28 113
MsG0280010619.01.T01 AT3G02380 29.395 347 172 13 75 401 26 319 2.32e-25 106
MsG0280010619.01.T01 AT1G68190 38.462 143 80 2 51 189 29 167 3.39e-21 95.1
MsG0280010619.01.T01 AT1G68190 38.028 142 80 2 52 189 1 138 2.03e-20 92.4
MsG0280010619.01.T01 AT1G68190 38.028 142 80 2 52 189 1 138 2.03e-20 92.4
MsG0280010619.01.T01 AT2G33500 27.632 228 120 7 75 298 22 208 6.91e-19 88.2
MsG0280010619.01.T01 AT2G33500 71.111 45 13 0 358 402 355 399 3.82e-12 67.8
MsG0280010619.01.T01 AT2G33500 27.632 228 120 7 75 298 22 208 6.99e-19 88.2
MsG0280010619.01.T01 AT2G33500 71.111 45 13 0 358 402 354 398 3.77e-12 67.8
MsG0280010619.01.T01 AT1G28050 42.391 92 51 1 75 164 19 110 3.32e-18 86.7
MsG0280010619.01.T01 AT1G28050 68.750 48 15 0 358 405 383 430 3.71e-12 68.2
MsG0280010619.01.T01 AT2G47890 39.837 123 74 0 75 197 23 145 1.13e-17 82.4
MsG0280010619.01.T01 AT2G47890 39.837 123 74 0 75 197 23 145 2.84e-17 82.4

Find 83 sgRNAs with CRISPR-Local

Find 368 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTCTCTTGGTATCTCATTT+TGG 0.141143 2:-72392213 None:intergenic
TTTGAATTTGATGGAATAAT+AGG 0.232482 2:-72390627 None:intergenic
CTACACTGGTTGTCCCTCTT+TGG 0.263095 2:+72390383 MsG0280010619.01.T01:CDS
ATCGCATTGGGAATCAAATT+TGG 0.271470 2:+72392160 MsG0280010619.01.T01:CDS
CCTTGCTTGTTGCTACTATA+TGG 0.292843 2:+72389313 MsG0280010619.01.T01:CDS
CTCTCTGTCAAGTTTGTGAT+TGG 0.298207 2:+72390310 MsG0280010619.01.T01:CDS
TGGCAGACTTATCTAAGATT+TGG 0.313493 2:+72390403 MsG0280010619.01.T01:CDS
AAAGAATGGCTTCGTTGGTT+TGG 0.319776 2:+72390542 MsG0280010619.01.T01:CDS
ATTCAATTACCTAACATAAA+TGG 0.323167 2:+72392077 MsG0280010619.01.T01:CDS
CCTCAGAGTCAAACTCATTC+AGG 0.325054 2:+72392047 MsG0280010619.01.T01:CDS
CTGCTTTCACCATTTATGTT+AGG 0.331564 2:-72392086 None:intergenic
GTTGTAACAGCAACGTTTCT+TGG 0.335819 2:+72389439 MsG0280010619.01.T01:intron
ATCTAAGATTTGGCCACATT+TGG 0.339459 2:+72390413 MsG0280010619.01.T01:CDS
TTGTAACAGCAACGTTTCTT+GGG 0.339853 2:+72389440 MsG0280010619.01.T01:intron
CGTCTTTGCTTGCATTGTGA+TGG 0.374410 2:+72390180 MsG0280010619.01.T01:CDS
TGTGTGCAGTTTGAATTTGA+TGG 0.391221 2:-72390636 None:intergenic
GTCTTTGCTTGCATTGTGAT+GGG 0.397890 2:+72390181 MsG0280010619.01.T01:CDS
GTAGCGGGATTCCACATTCT+CGG 0.408195 2:+72389464 MsG0280010619.01.T01:CDS
AAGCAAAGACGAGCGGAATC+AGG 0.415903 2:-72390168 None:intergenic
GGGATTCCACATTCTCGGTT+TGG 0.428356 2:+72389469 MsG0280010619.01.T01:CDS
AAATTCATCAAATGCTGCTT+GGG 0.439410 2:+72390443 MsG0280010619.01.T01:CDS
CCCGAAAAGAATGGCTTCGT+TGG 0.443487 2:+72390537 MsG0280010619.01.T01:CDS
TGACCGCCGCAATCAACATT+TGG 0.447113 2:+72390506 MsG0280010619.01.T01:CDS
AGCCTTTACGCAATGCAGTA+TGG 0.447631 2:+72386202 MsG0280010619.01.T01:CDS
TCATCCTGGTGAATCGCATT+GGG 0.451754 2:+72392148 MsG0280010619.01.T01:CDS
CAAATTCATCAAATGCTGCT+TGG 0.474377 2:+72390442 MsG0280010619.01.T01:CDS
TTAGGCAAAGCACTAGTACT+AGG 0.478053 2:-72390471 None:intergenic
AGTTGCATTAAGATTGATGA+TGG 0.482259 2:-72389234 None:intergenic
AAAGGTAGATTTGTTAAAGC+AGG 0.483112 2:+72393138 MsG0280010619.01.T01:CDS
GAGCAGAAACCCGAAAAGAA+TGG 0.491985 2:+72390528 MsG0280010619.01.T01:CDS
TTTCCATCATCAGGGGCTGG+TGG 0.497075 2:+72391936 MsG0280010619.01.T01:CDS
TGGATCAACAAATTTGATGC+AGG 0.507571 2:+72391956 MsG0280010619.01.T01:CDS
GTATCAAATGCGTTGAAAAG+AGG 0.508411 2:+72386177 MsG0280010619.01.T01:CDS
TTCATCCTGGTGAATCGCAT+TGG 0.508930 2:+72392147 MsG0280010619.01.T01:CDS
TTGGCTTTATCCCTTGCTTG+AGG 0.520712 2:-72392194 None:intergenic
GATTCCCAATGCGATTCACC+AGG 0.521167 2:-72392152 None:intergenic
GCAACAGAAGCATGCCTCTA+GGG 0.521759 2:+72392021 MsG0280010619.01.T01:CDS
TAACGCACAATCTAGAAGTT+CGG 0.523526 2:-72392114 None:intergenic
GATCCACCAGCCCCTGATGA+TGG 0.526248 2:-72391939 None:intergenic
ACGAAATCAAAACCTTCGGT+TGG 0.530911 2:-72390701 None:intergenic
CGTTAGTGGTCGCTCAAAAG+AGG 0.532571 2:-72393177 None:intergenic
CTGCAAATTCTCTGTCTCGC+AGG 0.534382 2:+72390214 MsG0280010619.01.T01:CDS
CTTAGATAAGTCTGCCAAAG+AGG 0.535601 2:-72390397 None:intergenic
CATGTGTCAAATATGAACCT+TGG 0.539470 2:+72390592 MsG0280010619.01.T01:CDS
GCGAATGACAAGTTGGGCGA+AGG 0.540796 2:+72390564 MsG0280010619.01.T01:CDS
GTCCATACTGCATTGCGTAA+AGG 0.544371 2:-72386204 None:intergenic
TGGTTTGGCGAATGACAAGT+TGG 0.547865 2:+72390557 MsG0280010619.01.T01:CDS
CAAGGTTCATATTTGACACA+TGG 0.558681 2:-72390591 None:intergenic
GGTTTGGCGAATGACAAGTT+GGG 0.560416 2:+72390558 MsG0280010619.01.T01:CDS
GCATTGGGAATCAAATTTGG+AGG 0.563030 2:+72392163 MsG0280010619.01.T01:CDS
TGCAACAGAAGCATGCCTCT+AGG 0.563513 2:+72392020 MsG0280010619.01.T01:CDS
TTACCTCCAGTGTTTCATCC+TGG 0.565788 2:+72392134 MsG0280010619.01.T01:CDS
GATACAAGAAAACGCGTGAA+AGG 0.568988 2:+72393120 MsG0280010619.01.T01:CDS
AGGGTGCTTGTCCTCAAGCA+AGG 0.569387 2:+72392183 MsG0280010619.01.T01:CDS
CTTATCGCAGAGGAGCGAGC+GGG 0.569512 2:-72390241 None:intergenic
ATAGTAGCAACAAGCAAGGT+AGG 0.570611 2:-72389309 None:intergenic
CACTTACCAAACCGAGAATG+TGG 0.571773 2:-72389475 None:intergenic
TGTAACAGCAACGTTTCTTG+GGG 0.572584 2:+72389441 MsG0280010619.01.T01:intron
GATATGCGTCTCGCAAAGCA+AGG 0.574066 2:+72393094 MsG0280010619.01.T01:CDS
CATTGGGAATCAAATTTGGA+GGG 0.578438 2:+72392164 MsG0280010619.01.T01:CDS
GTGCTACTCACTTTCTACAC+TGG 0.583152 2:+72390369 MsG0280010619.01.T01:CDS
TTAGATAAGTCTGCCAAAGA+GGG 0.584761 2:-72390396 None:intergenic
TCTGCTCCAAATGTTGATTG+CGG 0.591802 2:-72390512 None:intergenic
GCTCCAAATGTTGATTGCGG+CGG 0.597124 2:-72390509 None:intergenic
GGCATGCTTCTGTTGCAACT+AGG 0.602723 2:-72392014 None:intergenic
GGATCAACAAATTTGATGCA+GGG 0.606350 2:+72391957 MsG0280010619.01.T01:CDS
TCAAGACTCAAACCAACCGA+AGG 0.626760 2:+72390689 MsG0280010619.01.T01:CDS
GGGTGCTTGTCCTCAAGCAA+GGG 0.627728 2:+72392184 MsG0280010619.01.T01:CDS
CCTGAATGAGTTTGACTCTG+AGG 0.628593 2:-72392047 None:intergenic
TTGATGCAGGGCATCAACAA+TGG 0.635140 2:+72391969 MsG0280010619.01.T01:CDS
TTATCGCAGAGGAGCGAGCG+GGG 0.642930 2:-72390240 None:intergenic
GAATTTGCATCAACCAAATG+TGG 0.648426 2:-72390426 None:intergenic
CGAAATTACACTTATCGCAG+AGG 0.654750 2:-72390251 None:intergenic
ATATGCGTCTCGCAAAGCAA+GGG 0.656822 2:+72393095 MsG0280010619.01.T01:CDS
CCATATAGTAGCAACAAGCA+AGG 0.658955 2:-72389313 None:intergenic
ACTTATCGCAGAGGAGCGAG+CGG 0.664690 2:-72390242 None:intergenic
ACAATTTATGATCGACGCAG+CGG 0.677265 2:-72390287 None:intergenic
GTAACAGCAACGTTTCTTGG+GGG 0.688600 2:+72389442 MsG0280010619.01.T01:intron
GATTCACCAGGATGAAACAC+TGG 0.703479 2:-72392140 None:intergenic
TGACTCTGAGGAAACCCTAG+AGG 0.704907 2:-72392035 None:intergenic
ACAATGCAAGCAAAGACGAG+CGG 0.710081 2:-72390175 None:intergenic
TCACCAGGATGAAACACTGG+AGG 0.717611 2:-72392137 None:intergenic
GAGACAGAGAATTTGCAGAG+TGG 0.767566 2:-72390209 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAACAAAAAAAAAAAATGA+AGG - Chr2:72389366-72389385 None:intergenic 10.0%
!! ATTTCAAATTTAAAAGTTTA+GGG + Chr2:72387270-72387289 MsG0280010619.01.T01:intron 10.0%
!! TATTTCAAATTTAAAAGTTT+AGG + Chr2:72387269-72387288 MsG0280010619.01.T01:intron 10.0%
!!! AATCTTTTTTTATCATTATT+AGG + Chr2:72391881-72391900 MsG0280010619.01.T01:intron 10.0%
!!! ATACTTTTTTAAGTTTTTTT+AGG + Chr2:72390760-72390779 MsG0280010619.01.T01:intron 10.0%
!!! CGTTTATAAAATATTTTTTT+AGG + Chr2:72391686-72391705 MsG0280010619.01.T01:intron 10.0%
!!! GTTTTCTTATTTATTTTTTT+GGG - Chr2:72389215-72389234 None:intergenic 10.0%
!!! TTTATTATTATCGTTTTTAA+AGG + Chr2:72388974-72388993 MsG0280010619.01.T01:intron 10.0%
!! ACAGAATTTAATAATTATGT+AGG + Chr2:72387952-72387971 MsG0280010619.01.T01:intron 15.0%
!! AGTTAAAGAAGAAAAATATT+TGG - Chr2:72391419-72391438 None:intergenic 15.0%
!! ATATCAGTGATATTTATAAT+AGG + Chr2:72390085-72390104 MsG0280010619.01.T01:intron 15.0%
!! ATCTTAAATTAAAACTTATG+TGG - Chr2:72390922-72390941 None:intergenic 15.0%
!! TCTTAAATTAAAACTTATGT+GGG - Chr2:72390921-72390940 None:intergenic 15.0%
!! TTCATAAAACATACTATTTA+AGG + Chr2:72387540-72387559 MsG0280010619.01.T01:intron 15.0%
!! TTCATTCTTATTCTAATTAA+TGG + Chr2:72389386-72389405 MsG0280010619.01.T01:intron 15.0%
!!! AATCTTTTTAACATATGATA+AGG + Chr2:72389790-72389809 MsG0280010619.01.T01:intron 15.0%
!!! AGTATATTTAAAGATGTTTT+TGG - Chr2:72386642-72386661 None:intergenic 15.0%
!!! ATATCGATTAAATAATAAGT+AGG + Chr2:72388845-72388864 MsG0280010619.01.T01:intron 15.0%
!!! CTAATCTTTTTTATTTTAGT+TGG + Chr2:72390725-72390744 MsG0280010619.01.T01:intron 15.0%
!!! GCATAATTTTTAATACAATA+TGG + Chr2:72387162-72387181 MsG0280010619.01.T01:intron 15.0%
!!! GGTTTTCTTATTTATTTTTT+TGG - Chr2:72389216-72389235 None:intergenic 15.0%
!!! TGATATATATTTTGAAATGA+AGG - Chr2:72390988-72391007 None:intergenic 15.0%
!!! TGATATTTTGATACAAAATT+TGG + Chr2:72392284-72392303 MsG0280010619.01.T01:intron 15.0%
!!! TTAAAGTGAAAATTTTATCT+TGG + Chr2:72387660-72387679 MsG0280010619.01.T01:intron 15.0%
!! AACACAATTTAAATGATTAG+TGG - Chr2:72392495-72392514 None:intergenic 20.0%
!! AACTCTATACATATATACTA+TGG + Chr2:72392703-72392722 MsG0280010619.01.T01:intron 20.0%
!! AATTTATAGAATGCTAAAGA+TGG + Chr2:72387133-72387152 MsG0280010619.01.T01:intron 20.0%
!! ACAAAAAAAAAAAATGAAGG+TGG - Chr2:72389363-72389382 None:intergenic 20.0%
!! ACATATATACTATGGTAAAA+TGG + Chr2:72392711-72392730 MsG0280010619.01.T01:intron 20.0%
!! ACATCTTTAAATATACTTTC+AGG + Chr2:72386645-72386664 MsG0280010619.01.T01:intron 20.0%
!! ATAAAAAAAGATTTAGAGAG+AGG - Chr2:72391874-72391893 None:intergenic 20.0%
!! ATTCAATTACCTAACATAAA+TGG + Chr2:72392077-72392096 MsG0280010619.01.T01:CDS 20.0%
!! ATTTATAGAATGCTAAAGAT+GGG + Chr2:72387134-72387153 MsG0280010619.01.T01:intron 20.0%
!! ATTTCACAACAAAAATATTG+CGG + Chr2:72388666-72388685 MsG0280010619.01.T01:intron 20.0%
!! TAATTAGATCTCTGAATTTA+TGG - Chr2:72387245-72387264 None:intergenic 20.0%
!! TAATTATGTAGGTGAATATA+AGG + Chr2:72387963-72387982 MsG0280010619.01.T01:intron 20.0%
!! TTATTTAATCGATATAGAGA+CGG - Chr2:72388840-72388859 None:intergenic 20.0%
!! TTTGAATTTGATGGAATAAT+AGG - Chr2:72390630-72390649 None:intergenic 20.0%
!!! AAAATATTTGGTGTCAATTT+TGG - Chr2:72391407-72391426 None:intergenic 20.0%
!!! AACCCATACATTTTTTTAAA+GGG - Chr2:72387909-72387928 None:intergenic 20.0%
!!! AATAACTCTATATGGTATTT+TGG - Chr2:72386981-72387000 None:intergenic 20.0%
!!! ATAACTTAACGGATATTTAT+GGG - Chr2:72388891-72388910 None:intergenic 20.0%
!!! ATTTATAATAGGAGCATTTA+TGG + Chr2:72390096-72390115 MsG0280010619.01.T01:intron 20.0%
!!! CACTATTTATTTGTTTTGTT+TGG + Chr2:72387294-72387313 MsG0280010619.01.T01:intron 20.0%
!!! CTTAAATTTATAAGTTGACT+TGG + Chr2:72393041-72393060 MsG0280010619.01.T01:intron 20.0%
!!! TAAAACATCTAATTTAAGAC+CGG - Chr2:72386249-72386268 None:intergenic 20.0%
!!! TAACCCATACATTTTTTTAA+AGG - Chr2:72387910-72387929 None:intergenic 20.0%
!!! TAAGCAAAAATCAACATTTT+AGG + Chr2:72392541-72392560 MsG0280010619.01.T01:intron 20.0%
!!! TATATTTCAGGAGTTTTTAT+AGG - Chr2:72389081-72389100 None:intergenic 20.0%
!!! TGATTAGTTTAGTAGTAATA+TGG + Chr2:72391365-72391384 MsG0280010619.01.T01:intron 20.0%
!!! TGCAATTTTTTAAAAAGATG+TGG - Chr2:72388018-72388037 None:intergenic 20.0%
!!! TTATTTTTTTGGGTACAAAT+TGG - Chr2:72389205-72389224 None:intergenic 20.0%
!!! TTCCCTTTAAAAAAATGTAT+GGG + Chr2:72387904-72387923 MsG0280010619.01.T01:intron 20.0%
!!! TTTCCCTTTAAAAAAATGTA+TGG + Chr2:72387903-72387922 MsG0280010619.01.T01:intron 20.0%
! AAAAAAAAAAATGAAGGTGG+TGG - Chr2:72389360-72389379 None:intergenic 25.0%
! AAACATCATTTGTATGACTA+AGG - Chr2:72389727-72389746 None:intergenic 25.0%
! AACAAATTTCGACAACAATT+TGG + Chr2:72392308-72392327 MsG0280010619.01.T01:intron 25.0%
! ACTAATTATATGCCAATCAT+TGG - Chr2:72390951-72390970 None:intergenic 25.0%
! AGGAATAGAATGTCTATTAA+TGG + Chr2:72391602-72391621 MsG0280010619.01.T01:intron 25.0%
! ATAATAAAACGAGCTCTTAT+AGG - Chr2:72388962-72388981 None:intergenic 25.0%
! ATTAAGAGAACTTCAAAATG+TGG + Chr2:72386537-72386556 MsG0280010619.01.T01:intron 25.0%
! CCATAACAAATAACTCTATA+TGG - Chr2:72386989-72387008 None:intergenic 25.0%
! GAATTTGTGTTTCTTTATCT+GGG + Chr2:72389408-72389427 MsG0280010619.01.T01:intron 25.0%
! GATTAATTATGTTCAGTGTA+TGG + Chr2:72392355-72392374 MsG0280010619.01.T01:intron 25.0%
! TACACAGTTATATATAATGC+AGG - Chr2:72392882-72392901 None:intergenic 25.0%
! TATACTATGGTAAAATGGAA+CGG + Chr2:72392716-72392735 MsG0280010619.01.T01:intron 25.0%
! TCATTGTATGCATATATTTC+AGG - Chr2:72389093-72389112 None:intergenic 25.0%
! TGAAAATCTGAAAATCATCA+TGG - Chr2:72392458-72392477 None:intergenic 25.0%
! TGTTGTTGATCATGTTTATT+TGG - Chr2:72386494-72386513 None:intergenic 25.0%
! TTTACTTGTAAGAATGATAC+CGG + Chr2:72386227-72386246 MsG0280010619.01.T01:intron 25.0%
! TTTCACAACAAAAATATTGC+GGG + Chr2:72388667-72388686 MsG0280010619.01.T01:intron 25.0%
!! AACGTGTTAATAATTTTACG+TGG - Chr2:72388104-72388123 None:intergenic 25.0%
!! AACGTTTTATGATTAGATCA+TGG + Chr2:72389845-72389864 MsG0280010619.01.T01:intron 25.0%
!! ACAAATGACTGTTTTGTATT+GGG + Chr2:72390336-72390355 MsG0280010619.01.T01:CDS 25.0%
!! ACGTGTTAATAATTTTACGT+GGG - Chr2:72388103-72388122 None:intergenic 25.0%
!! CCATATAGAGTTATTTGTTA+TGG + Chr2:72386986-72387005 MsG0280010619.01.T01:intron 25.0%
!! CTTCTTCAAATCTTATTTCT+TGG + Chr2:72389517-72389536 MsG0280010619.01.T01:intron 25.0%
!! GATAACTTAACGGATATTTA+TGG - Chr2:72388892-72388911 None:intergenic 25.0%
!! TAATATAGCTTGGTAATTTG+AGG + Chr2:72388344-72388363 MsG0280010619.01.T01:intron 25.0%
!! TAATGATGCTTTGATTTCTT+TGG + Chr2:72389914-72389933 MsG0280010619.01.T01:intron 25.0%
!! TACAAATGACTGTTTTGTAT+TGG + Chr2:72390335-72390354 MsG0280010619.01.T01:CDS 25.0%
!! TATAAATGCATTGATGCAAA+AGG + Chr2:72386465-72386484 MsG0280010619.01.T01:intron 25.0%
!! TATTGATGCGGTAATTTTTA+AGG + Chr2:72388192-72388211 MsG0280010619.01.T01:intron 25.0%
!! TCTATTTTACGATTTTCTAG+AGG - Chr2:72387086-72387105 None:intergenic 25.0%
!! TCTTATTTCTTGGATATACT+TGG + Chr2:72389527-72389546 MsG0280010619.01.T01:intron 25.0%
!! TCTTTAACTAATTAGCTTCA+AGG + Chr2:72391430-72391449 MsG0280010619.01.T01:intron 25.0%
!! TTTTTGCTTATAATAGTGAC+CGG - Chr2:72392531-72392550 None:intergenic 25.0%
!!! ACTTTACTTGTTGTAAGTAT+AGG + Chr2:72387185-72387204 MsG0280010619.01.T01:intron 25.0%
!!! AGTAAAATACAGTATTGATG+CGG + Chr2:72388180-72388199 MsG0280010619.01.T01:intron 25.0%
!!! ATATGGTATTTTGGTCTTTT+TGG - Chr2:72386972-72386991 None:intergenic 25.0%
!!! GTCATACAAATGATGTTTTT+TGG + Chr2:72389729-72389748 MsG0280010619.01.T01:intron 25.0%
!!! GTTTTGTTTGGATTTAGTTA+TGG + Chr2:72387306-72387325 MsG0280010619.01.T01:intron 25.0%
!!! TTTGGTTGTTTTACTTGAAA+TGG + Chr2:72389932-72389951 MsG0280010619.01.T01:intron 25.0%
AAAGAAGCGATAATATAGCT+TGG + Chr2:72388334-72388353 MsG0280010619.01.T01:intron 30.0%
AATTTCGACAACAATTTGGA+TGG + Chr2:72392312-72392331 MsG0280010619.01.T01:intron 30.0%
ACACGTTAAGAAGTCAAATA+TGG - Chr2:72387778-72387797 None:intergenic 30.0%
AGAATTAAGAAAACCGTTCT+TGG - Chr2:72386792-72386811 None:intergenic 30.0%
AGTTGCATTAAGATTGATGA+TGG - Chr2:72389237-72389256 None:intergenic 30.0%
CAACTCAACAAATCAAACTT+AGG + Chr2:72389155-72389174 MsG0280010619.01.T01:intron 30.0%
CACGTTAAGAAGTCAAATAT+GGG - Chr2:72387777-72387796 None:intergenic 30.0%
CCTCATCAAAATTGAATCAT+TGG + Chr2:72389813-72389832 MsG0280010619.01.T01:intron 30.0%
CGAATTGGAGATCAATTAAA+GGG - Chr2:72391180-72391199 None:intergenic 30.0%
CTCAATTCATTAATAGTAGC+AGG - Chr2:72388617-72388636 None:intergenic 30.0%
GAATTGGAGATCAATTAAAG+GGG - Chr2:72391179-72391198 None:intergenic 30.0%
GACATAAGATAATGATGCTT+TGG - Chr2:72388551-72388570 None:intergenic 30.0%
GCAGTCAAATATTATTTCGT+CGG - Chr2:72391547-72391566 None:intergenic 30.0%
GGAATTTGTGTTTCTTTATC+TGG + Chr2:72389407-72389426 MsG0280010619.01.T01:intron 30.0%
GGCTAATTATGTTTAGTAGA+TGG - Chr2:72392415-72392434 None:intergenic 30.0%
GTAAGAGATGGATAACTTAA+CGG - Chr2:72388902-72388921 None:intergenic 30.0%
TAAGGATCTAACAATCATGA+GGG + Chr2:72391465-72391484 MsG0280010619.01.T01:intron 30.0%
TAGAACGAAATCAAAACCTT+CGG - Chr2:72390708-72390727 None:intergenic 30.0%
TAGAGACTAATTCTTCGAAT+TGG - Chr2:72391195-72391214 None:intergenic 30.0%
TCGAATTGGAGATCAATTAA+AGG - Chr2:72391181-72391200 None:intergenic 30.0%
TGAAATGAAATGGAATGGAT+TGG - Chr2:72390016-72390035 None:intergenic 30.0%
TGAATATGTTTGCAAGTACA+TGG - Chr2:72391013-72391032 None:intergenic 30.0%
TGGAATGAAATGAAATGGAA+TGG - Chr2:72390021-72390040 None:intergenic 30.0%
TTAAGGATCTAACAATCATG+AGG + Chr2:72391464-72391483 MsG0280010619.01.T01:intron 30.0%
TTGTTAGATCCTTAACATCA+TGG - Chr2:72391459-72391478 None:intergenic 30.0%
! AAATTCATCAAATGCTGCTT+GGG + Chr2:72390443-72390462 MsG0280010619.01.T01:CDS 30.0%
! AAGGTCATTAAAGAGTACAT+TGG + Chr2:72387559-72387578 MsG0280010619.01.T01:intron 30.0%
! AATGTGTATGACACTTGTTA+AGG - Chr2:72387743-72387762 None:intergenic 30.0%
! AGGTCATTAAAGAGTACATT+GGG + Chr2:72387560-72387579 MsG0280010619.01.T01:intron 30.0%
! ATAGGAGAATTTTCAATCCA+AGG - Chr2:72390612-72390631 None:intergenic 30.0%
! ATTTTCGCTAATGTCTCTAA+AGG - Chr2:72387802-72387821 None:intergenic 30.0%
! GTATGATTTTTCCATCATCA+GGG + Chr2:72391928-72391947 MsG0280010619.01.T01:CDS 30.0%
! GTTTTGCTTATAATAGTGAC+CGG + Chr2:72392639-72392658 MsG0280010619.01.T01:intron 30.0%
! TATGATTTTTCCATCATCAG+GGG + Chr2:72391929-72391948 MsG0280010619.01.T01:CDS 30.0%
! TGTATGATTTTTCCATCATC+AGG + Chr2:72391927-72391946 MsG0280010619.01.T01:CDS 30.0%
! TGTTTTACTTGAAATGGCAA+AGG + Chr2:72389938-72389957 MsG0280010619.01.T01:intron 30.0%
! TTAGAGTGCTAACACTTATT+TGG + Chr2:72392954-72392973 MsG0280010619.01.T01:intron 30.0%
! TTTCAAATTTTCTTTGCGCT+TGG + Chr2:72386885-72386904 MsG0280010619.01.T01:intron 30.0%
! TTTCTCTTGGTATCTCATTT+TGG - Chr2:72392216-72392235 None:intergenic 30.0%
! TTTTACGTGGGTATCAAAAT+AGG - Chr2:72388091-72388110 None:intergenic 30.0%
!! AAAGGTAGATTTGTTAAAGC+AGG + Chr2:72393138-72393157 MsG0280010619.01.T01:CDS 30.0%
!! CCAATGATTCAATTTTGATG+AGG - Chr2:72389816-72389835 None:intergenic 30.0%
!! TCTTTTTGGTATAAGCCATT+GGG - Chr2:72386958-72386977 None:intergenic 30.0%
!! TTCGAGTTTTCTTTTTCTCT+TGG - Chr2:72392229-72392248 None:intergenic 30.0%
!!! AGTGAGTTACTCTTGTTTTT+GGG - Chr2:72387058-72387077 None:intergenic 30.0%
!!! TCACAATGTTGTTTTCTGAT+CGG + Chr2:72386927-72386946 MsG0280010619.01.T01:intron 30.0%
!!! TTTTTTTGGGTACAAATTGG+TGG - Chr2:72389202-72389221 None:intergenic 30.0%
AAGCTGCTAAAATGAGTTAC+TGG + Chr2:72388735-72388754 MsG0280010619.01.T01:intron 35.0%
AAGGATCTAACAATCATGAG+GGG + Chr2:72391466-72391485 MsG0280010619.01.T01:intron 35.0%
ACGTAAATATTGAGGAAGCA+CGG - Chr2:72387825-72387844 None:intergenic 35.0%
ACGTTTGTGGTGAAAAACTA+TGG - Chr2:72389120-72389139 None:intergenic 35.0%
ACTTCTGATTGAAGATTGTC+CGG + Chr2:72389557-72389576 MsG0280010619.01.T01:intron 35.0%
ACTTGAAATGGCAAAGGATA+AGG + Chr2:72389944-72389963 MsG0280010619.01.T01:intron 35.0%
AGAATGCTAAAGATGGGATT+TGG + Chr2:72387140-72387159 MsG0280010619.01.T01:intron 35.0%
AGATACCCACGTAAATATTG+AGG - Chr2:72387833-72387852 None:intergenic 35.0%
ATAATGATATACACGTGCAG+CGG - Chr2:72388816-72388835 None:intergenic 35.0%
ATCGCATTGGGAATCAAATT+TGG + Chr2:72392160-72392179 MsG0280010619.01.T01:CDS 35.0%
ATTCTTCAATTAATGCGTCC+TGG - Chr2:72386574-72386593 None:intergenic 35.0%
ATTGAAACCTTCACATAGAC+CGG - Chr2:72391493-72391512 None:intergenic 35.0%
ATTTGAAAGTCCTCACAACT+TGG - Chr2:72386873-72386892 None:intergenic 35.0%
CAAATTCATCAAATGCTGCT+TGG + Chr2:72390442-72390461 MsG0280010619.01.T01:CDS 35.0%
CAAGGTTCATATTTGACACA+TGG - Chr2:72390594-72390613 None:intergenic 35.0%
CACTTTCTCCTTAACAACAT+AGG + Chr2:72388125-72388144 MsG0280010619.01.T01:intron 35.0%
CATGTGTCAAATATGAACCT+TGG + Chr2:72390592-72390611 MsG0280010619.01.T01:CDS 35.0%
CATTGGGAATCAAATTTGGA+GGG + Chr2:72392164-72392183 MsG0280010619.01.T01:CDS 35.0%
CATTGTGAAGTTACATAAGC+AGG - Chr2:72386915-72386934 None:intergenic 35.0%
CCATTTCATTTCATTCCATC+AGG + Chr2:72390023-72390042 MsG0280010619.01.T01:intron 35.0%
CCTGATGGAATGAAATGAAA+TGG - Chr2:72390026-72390045 None:intergenic 35.0%
CTAGTAGATGATATGAAGCA+CGG - Chr2:72389660-72389679 None:intergenic 35.0%
CTCTCACTCATTTACCAATA+TGG + Chr2:72391054-72391073 MsG0280010619.01.T01:intron 35.0%
CTGCTTTCACCATTTATGTT+AGG - Chr2:72392089-72392108 None:intergenic 35.0%
GAATTTGCATCAACCAAATG+TGG - Chr2:72390429-72390448 None:intergenic 35.0%
GGATCAACAAATTTGATGCA+GGG + Chr2:72391957-72391976 MsG0280010619.01.T01:CDS 35.0%
GTATCAAATGCGTTGAAAAG+AGG + Chr2:72386177-72386196 MsG0280010619.01.T01:CDS 35.0%
GTCTTGTGAATGGAAATCAT+AGG - Chr2:72390851-72390870 None:intergenic 35.0%
GTTAATGACGTTCAAAGTTG+TGG - Chr2:72392436-72392455 None:intergenic 35.0%
TAACGCACAATCTAGAAGTT+CGG - Chr2:72392117-72392136 None:intergenic 35.0%
TAAGATAGCACACCAATGAT+TGG + Chr2:72390936-72390955 MsG0280010619.01.T01:intron 35.0%
TCTATGTGAAGGTTTCAATG+TGG + Chr2:72391494-72391513 MsG0280010619.01.T01:intron 35.0%
TGCTTCCTCAATATTTACGT+GGG + Chr2:72387825-72387844 MsG0280010619.01.T01:intron 35.0%
TGGATCAACAAATTTGATGC+AGG + Chr2:72391956-72391975 MsG0280010619.01.T01:CDS 35.0%
TGTGTGCAGTTTGAATTTGA+TGG - Chr2:72390639-72390658 None:intergenic 35.0%
TGTGTTCAATATACATCCTC+CGG + Chr2:72392509-72392528 MsG0280010619.01.T01:intron 35.0%
TGTTGAAAACGAGTAAGAGA+TGG - Chr2:72388914-72388933 None:intergenic 35.0%
TTAGATAAGTCTGCCAAAGA+GGG - Chr2:72390399-72390418 None:intergenic 35.0%
TTCATCTTTGACATGAGCTT+GGG + Chr2:72386829-72386848 MsG0280010619.01.T01:intron 35.0%
TTCTCCTTAACAACATAGGA+GGG + Chr2:72388129-72388148 MsG0280010619.01.T01:intron 35.0%
TTCTTCAATTAATGCGTCCT+GGG - Chr2:72386573-72386592 None:intergenic 35.0%
TTGGTACAACAAATCAGGTT+TGG + Chr2:72393060-72393079 MsG0280010619.01.T01:intron 35.0%
TTGTAACAGCAACGTTTCTT+GGG + Chr2:72389440-72389459 MsG0280010619.01.T01:intron 35.0%
TTTCATCTTTGACATGAGCT+TGG + Chr2:72386828-72386847 MsG0280010619.01.T01:intron 35.0%
TTTCTCCTTAACAACATAGG+AGG + Chr2:72388128-72388147 MsG0280010619.01.T01:intron 35.0%
TTTGAAAGTCCTCACAACTT+GGG - Chr2:72386872-72386891 None:intergenic 35.0%
! ATCTAAGATTTGGCCACATT+TGG + Chr2:72390413-72390432 MsG0280010619.01.T01:CDS 35.0%
! TCTAAAGTCACGCATATGAT+TGG - Chr2:72391768-72391787 None:intergenic 35.0%
! TGGCAGACTTATCTAAGATT+TGG + Chr2:72390403-72390422 MsG0280010619.01.T01:CDS 35.0%
! TGGTAATTTGAGGTTTCCTT+CGG + Chr2:72388354-72388373 MsG0280010619.01.T01:intron 35.0%
!! AAGCTCTATGTGAGTTTTGT+GGG + Chr2:72390119-72390138 MsG0280010619.01.T01:intron 35.0%
!! AATGAGTGAGAGTATTAGTG+TGG - Chr2:72391046-72391065 None:intergenic 35.0%
!! ATGTTCGACGCTATTTTGAA+TGG + Chr2:72388442-72388461 MsG0280010619.01.T01:intron 35.0%
!! CGGTAATTTTTAAGGAGCAA+GGG + Chr2:72388200-72388219 MsG0280010619.01.T01:intron 35.0%
!! GGATCAACATGTGTTTTAGA+GGG + Chr2:72388230-72388249 MsG0280010619.01.T01:intron 35.0%
!! GTCTTTTTGGTATAAGCCAT+TGG - Chr2:72386959-72386978 None:intergenic 35.0%
!! TGAAATGGAATGGATTGGAT+CGG - Chr2:72390011-72390030 None:intergenic 35.0%
!! TGGTGGTGGTTATTAATTCA+TGG - Chr2:72389185-72389204 None:intergenic 35.0%
!! TTGACTTGGTACAACAAATC+AGG + Chr2:72393055-72393074 MsG0280010619.01.T01:intron 35.0%
!!! GAGTGAGTTACTCTTGTTTT+TGG - Chr2:72387059-72387078 None:intergenic 35.0%
!!! GATCAACATGTGTTTTAGAG+GGG + Chr2:72388231-72388250 MsG0280010619.01.T01:intron 35.0%
AAAACTTATGTGGGTCGAAG+AGG - Chr2:72390912-72390931 None:intergenic 40.0%
AACTGAGTTCCTTAAGCATG+CGG + Chr2:72391096-72391115 MsG0280010619.01.T01:intron 40.0%
AATGGAAATCATAGGCACAC+TGG - Chr2:72390843-72390862 None:intergenic 40.0%
AATTCATGACCGCATGCTTA+AGG - Chr2:72391108-72391127 None:intergenic 40.0%
ACAAAATACAACCACGGAGA+TGG + Chr2:72391579-72391598 MsG0280010619.01.T01:intron 40.0%
ACAATTTATGATCGACGCAG+CGG - Chr2:72390290-72390309 None:intergenic 40.0%
ACGAAATCAAAACCTTCGGT+TGG - Chr2:72390704-72390723 None:intergenic 40.0%
ACTGCCACAAAATACAACCA+CGG + Chr2:72391573-72391592 MsG0280010619.01.T01:intron 40.0%
AGGATCTAACAATCATGAGG+GGG + Chr2:72391467-72391486 MsG0280010619.01.T01:intron 40.0%
ATAGCAAGCAAACTGGTTGA+TGG - Chr2:72387366-72387385 None:intergenic 40.0%
ATAGTAGCAACAAGCAAGGT+AGG - Chr2:72389312-72389331 None:intergenic 40.0%
ATCATGGTGTAAGTGCATAG+TGG + Chr2:72389861-72389880 MsG0280010619.01.T01:intron 40.0%
ATGATGCTTTGGCTAACAAG+TGG - Chr2:72388540-72388559 None:intergenic 40.0%
CAACATGTGTATGCCACATA+AGG + Chr2:72388929-72388948 MsG0280010619.01.T01:intron 40.0%
CCAACTTTGTCACACCATAT+TGG - Chr2:72391071-72391090 None:intergenic 40.0%
CCAATATGGTGTGACAAAGT+TGG + Chr2:72391068-72391087 MsG0280010619.01.T01:intron 40.0%
CCATATAGTAGCAACAAGCA+AGG - Chr2:72389316-72389335 None:intergenic 40.0%
CCTGTTTAAGTCGACATTCA+TGG + Chr2:72392786-72392805 MsG0280010619.01.T01:intron 40.0%
CGAAATTACACTTATCGCAG+AGG - Chr2:72390254-72390273 None:intergenic 40.0%
CTCTAACATAGCAAGCAAAC+TGG - Chr2:72387373-72387392 None:intergenic 40.0%
CTCTCTGTCAAGTTTGTGAT+TGG + Chr2:72390310-72390329 MsG0280010619.01.T01:CDS 40.0%
CTTAGATAAGTCTGCCAAAG+AGG - Chr2:72390400-72390419 None:intergenic 40.0%
GATACAAGAAAACGCGTGAA+AGG + Chr2:72393120-72393139 MsG0280010619.01.T01:CDS 40.0%
GCATTGGGAATCAAATTTGG+AGG + Chr2:72392163-72392182 MsG0280010619.01.T01:CDS 40.0%
GCGTAGACAACTTGGTTTAA+TGG + Chr2:72388274-72388293 MsG0280010619.01.T01:intron 40.0%
GGAAAATCAACAAATACGCG+TGG - Chr2:72387888-72387907 None:intergenic 40.0%
GTAATCCTCTGTGTTTGTGT+CGG - Chr2:72389586-72389605 None:intergenic 40.0%
GTCTTTGCTTGCATTGTGAT+GGG + Chr2:72390181-72390200 MsG0280010619.01.T01:CDS 40.0%
GTGCTTCCTCAATATTTACG+TGG + Chr2:72387824-72387843 MsG0280010619.01.T01:intron 40.0%
GTTATGGCGATGATTATCCA+CGG + Chr2:72387322-72387341 MsG0280010619.01.T01:intron 40.0%
GTTGTAACAGCAACGTTTCT+TGG + Chr2:72389439-72389458 MsG0280010619.01.T01:intron 40.0%
TATAGGTGAACCACCTTATG+TGG - Chr2:72388945-72388964 None:intergenic 40.0%
TCAAGGATGCCATGATGTTA+AGG + Chr2:72391447-72391466 MsG0280010619.01.T01:intron 40.0%
TCAAGTTTGATAGACACCGA+AGG - Chr2:72388373-72388392 None:intergenic 40.0%
TGAATATCATGTACACCCTC+CGG - Chr2:72392661-72392680 None:intergenic 40.0%
TGCTTATAATAGTGACCGGA+GGG + Chr2:72392643-72392662 MsG0280010619.01.T01:intron 40.0%
TGTAACAGCAACGTTTCTTG+GGG + Chr2:72389441-72389460 MsG0280010619.01.T01:intron 40.0%
TTGCTTATAATAGTGACCGG+AGG + Chr2:72392642-72392661 MsG0280010619.01.T01:intron 40.0%
TTGCTTATAATAGTGACCGG+AGG - Chr2:72392661-72392642 None:intergenic 40.0%
! AAAGAATGGCTTCGTTGGTT+TGG + Chr2:72390542-72390561 MsG0280010619.01.T01:CDS 40.0%
! ACCAACGAAGCCATTCTTTT+CGG - Chr2:72390541-72390560 None:intergenic 40.0%
! ATCTCCGTGGTTGTATTTTG+TGG - Chr2:72391580-72391599 None:intergenic 40.0%
! CCTTGCTTGTTGCTACTATA+TGG + Chr2:72389313-72389332 MsG0280010619.01.T01:CDS 40.0%
! GAAGCTCTATGTGAGTTTTG+TGG + Chr2:72390118-72390137 MsG0280010619.01.T01:intron 40.0%
! TATTGACTACTATGTGTCCG+TGG - Chr2:72387342-72387361 None:intergenic 40.0%
! TCATGTTCGAGTCTTGTGAA+TGG - Chr2:72390861-72390880 None:intergenic 40.0%
! TCTGCTCCAAATGTTGATTG+CGG - Chr2:72390515-72390534 None:intergenic 40.0%
! TGACTGCTACATTTTGTGAC+TGG - Chr2:72391642-72391661 None:intergenic 40.0%
! TGCGGGTTGTATAAATGTGA+TGG + Chr2:72388684-72388703 MsG0280010619.01.T01:intron 40.0%
! TTAGGCAAAGCACTAGTACT+AGG - Chr2:72390474-72390493 None:intergenic 40.0%
!! AGCTCTATGTGAGTTTTGTG+GGG + Chr2:72390120-72390139 MsG0280010619.01.T01:intron 40.0%
!! CCATGAATGTCGACTTAAAC+AGG - Chr2:72392789-72392808 None:intergenic 40.0%
!! GCGGTAATTTTTAAGGAGCA+AGG + Chr2:72388199-72388218 MsG0280010619.01.T01:intron 40.0%
!! GGGATCAACATGTGTTTTAG+AGG + Chr2:72388229-72388248 MsG0280010619.01.T01:intron 40.0%
!! TTAAGGAGCAAGGGTGTTAT+GGG + Chr2:72388209-72388228 MsG0280010619.01.T01:intron 40.0%
!! TTTAAGGAGCAAGGGTGTTA+TGG + Chr2:72388208-72388227 MsG0280010619.01.T01:intron 40.0%
!! TTTTGGGTACAAATTGGTGG+TGG - Chr2:72389199-72389218 None:intergenic 40.0%
!!! CGGTCACTGATTTCAGTTTT+AGG - Chr2:72390492-72390511 None:intergenic 40.0%
AAATACAACCACGGAGATGG+AGG + Chr2:72391582-72391601 MsG0280010619.01.T01:intron 45.0%
AATGTGGCTAGAAACATCCC+AGG + Chr2:72386553-72386572 MsG0280010619.01.T01:intron 45.0%
ACAATGCAAGCAAAGACGAG+CGG - Chr2:72390178-72390197 None:intergenic 45.0%
ACATTGAGGCGTAGACAACT+TGG + Chr2:72388266-72388285 MsG0280010619.01.T01:intron 45.0%
AGCCTTTACGCAATGCAGTA+TGG + Chr2:72386202-72386221 MsG0280010619.01.T01:CDS 45.0%
AGGTGCTCTTCCATACACAT+CGG - Chr2:72391141-72391160 None:intergenic 45.0%
ATATGCGTCTCGCAAAGCAA+GGG + Chr2:72393095-72393114 MsG0280010619.01.T01:CDS 45.0%
ATTCTATTCCTCCATCTCCG+TGG - Chr2:72391593-72391612 None:intergenic 45.0%
CACTTACCAAACCGAGAATG+TGG - Chr2:72389478-72389497 None:intergenic 45.0%
CAGAATTCTCCCAAGTTGTG+AGG + Chr2:72386860-72386879 MsG0280010619.01.T01:intron 45.0%
CATGTGTATGCCACATAAGG+TGG + Chr2:72388932-72388951 MsG0280010619.01.T01:intron 45.0%
CCTCAGAGTCAAACTCATTC+AGG + Chr2:72392047-72392066 MsG0280010619.01.T01:CDS 45.0%
CCTGAATGAGTTTGACTCTG+AGG - Chr2:72392050-72392069 None:intergenic 45.0%
CGACATTCATGGACAATCAC+AGG + Chr2:72392797-72392816 MsG0280010619.01.T01:intron 45.0%
CGTCTTTGCTTGCATTGTGA+TGG + Chr2:72390180-72390199 MsG0280010619.01.T01:CDS 45.0%
CTCTTAACACAGCTACCTGA+TGG - Chr2:72390041-72390060 None:intergenic 45.0%
CTTAACAACATAGGAGGGCA+GGG + Chr2:72388134-72388153 MsG0280010619.01.T01:intron 45.0%
GAGACAGAGAATTTGCAGAG+TGG - Chr2:72390212-72390231 None:intergenic 45.0%
GAGCAGAAACCCGAAAAGAA+TGG + Chr2:72390528-72390547 MsG0280010619.01.T01:CDS 45.0%
GATTCACCAGGATGAAACAC+TGG - Chr2:72392143-72392162 None:intergenic 45.0%
GGTTTGGCGAATGACAAGTT+GGG + Chr2:72390558-72390577 MsG0280010619.01.T01:CDS 45.0%
GTAACAGCAACGTTTCTTGG+GGG + Chr2:72389442-72389461 MsG0280010619.01.T01:intron 45.0%
GTCCATACTGCATTGCGTAA+AGG - Chr2:72386207-72386226 None:intergenic 45.0%
TAGCAGTCACATTGAGACTG+CGG + Chr2:72391653-72391672 MsG0280010619.01.T01:intron 45.0%
TCAAGACTCAAACCAACCGA+AGG + Chr2:72390689-72390708 MsG0280010619.01.T01:CDS 45.0%
TCATCCTGGTGAATCGCATT+GGG + Chr2:72392148-72392167 MsG0280010619.01.T01:CDS 45.0%
TTACCTCCAGTGTTTCATCC+TGG + Chr2:72392134-72392153 MsG0280010619.01.T01:CDS 45.0%
TTCATCCTGGTGAATCGCAT+TGG + Chr2:72392147-72392166 MsG0280010619.01.T01:CDS 45.0%
TTCTGATCGGATCAACCCAA+TGG + Chr2:72386940-72386959 MsG0280010619.01.T01:intron 45.0%
! AGGTGCTTTAGTTCATGTGC+AGG + Chr2:72386757-72386776 MsG0280010619.01.T01:intron 45.0%
! ATTTTTCCATCATCAGGGGC+TGG + Chr2:72391933-72391952 MsG0280010619.01.T01:CDS 45.0%
! CCAACGAAGCCATTCTTTTC+GGG - Chr2:72390540-72390559 None:intergenic 45.0%
! GGTGCTTTAGTTCATGTGCA+GGG + Chr2:72386758-72386777 MsG0280010619.01.T01:intron 45.0%
! GTGCTACTCACTTTCTACAC+TGG + Chr2:72390369-72390388 MsG0280010619.01.T01:CDS 45.0%
! GTTTTCTATGTGCGATACGC+AGG + Chr2:72386674-72386693 MsG0280010619.01.T01:intron 45.0%
! TGGTTTGGCGAATGACAAGT+TGG + Chr2:72390557-72390576 MsG0280010619.01.T01:CDS 45.0%
! TGTTGAGTTGTCCTCTAACG+TGG - Chr2:72389145-72389164 None:intergenic 45.0%
! TTGATGCAGGGCATCAACAA+TGG + Chr2:72391969-72391988 MsG0280010619.01.T01:CDS 45.0%
!! ATGGATTGGATCGGATTGGA+CGG - Chr2:72390002-72390021 None:intergenic 45.0%
!! TGGAATGGATTGGATCGGAT+TGG - Chr2:72390006-72390025 None:intergenic 45.0%
!! TTGGCTTTATCCCTTGCTTG+AGG - Chr2:72392197-72392216 None:intergenic 45.0%
!!! ATGTGTTTTAGAGGGGATCG+AGG + Chr2:72388238-72388257 MsG0280010619.01.T01:intron 45.0%
!!! ATAATTTTCTTATTTTTTTA+AGG + Chr2:72389015-72389034 MsG0280010619.01.T01:intron 5.0%
!!! CTAAAAAAATATTTTATAAA+CGG - Chr2:72391688-72391707 None:intergenic 5.0%
AAGCAAAGACGAGCGGAATC+AGG - Chr2:72390171-72390190 None:intergenic 50.0%
CACAAACGTTGCCACGTTAG+AGG + Chr2:72389131-72389150 MsG0280010619.01.T01:intron 50.0%
CCCAACGAGGCAAAAGGAAA+CGG + Chr2:72388307-72388326 MsG0280010619.01.T01:intron 50.0%
CCCGAAAAGAATGGCTTCGT+TGG + Chr2:72390537-72390556 MsG0280010619.01.T01:CDS 50.0%
CCTGCCCTCCTATGTTGTTA+AGG - Chr2:72388136-72388155 None:intergenic 50.0%
CCTTAACAACATAGGAGGGC+AGG + Chr2:72388133-72388152 MsG0280010619.01.T01:intron 50.0%
CGATTCCTGACCGATGTGTA+TGG + Chr2:72391128-72391147 MsG0280010619.01.T01:intron 50.0%
CTCTAACGTGGCAACGTTTG+TGG - Chr2:72389133-72389152 None:intergenic 50.0%
CTCTTCCATACACATCGGTC+AGG - Chr2:72391136-72391155 None:intergenic 50.0%
CTGCAAATTCTCTGTCTCGC+AGG + Chr2:72390214-72390233 MsG0280010619.01.T01:CDS 50.0%
GATATGCGTCTCGCAAAGCA+AGG + Chr2:72393094-72393113 MsG0280010619.01.T01:CDS 50.0%
GATTCCCAATGCGATTCACC+AGG - Chr2:72392155-72392174 None:intergenic 50.0%
GGCATGCTTCTGTTGCAACT+AGG - Chr2:72392017-72392036 None:intergenic 50.0%
GGGATTCCACATTCTCGGTT+TGG + Chr2:72389469-72389488 MsG0280010619.01.T01:CDS 50.0%
GTAGCAGGCGTGATACATGA+TGG - Chr2:72388602-72388621 None:intergenic 50.0%
TCACATTGAGACTGCGGTAG+AGG + Chr2:72391659-72391678 MsG0280010619.01.T01:intron 50.0%
TCACCAGGATGAAACACTGG+AGG - Chr2:72392140-72392159 None:intergenic 50.0%
TCTAACAATCATGAGGGGGC+CGG + Chr2:72391471-72391490 MsG0280010619.01.T01:intron 50.0%
TCTGTGTTTGTGTCGGACAC+CGG - Chr2:72389579-72389598 None:intergenic 50.0%
TGACCGCCGCAATCAACATT+TGG + Chr2:72390506-72390525 MsG0280010619.01.T01:CDS 50.0%
TTACACTTTCAGCAAGCGCG+AGG + Chr2:72386737-72386756 MsG0280010619.01.T01:intron 50.0%
! ACCGTTTCCTTTTGCCTCGT+TGG - Chr2:72388311-72388330 None:intergenic 50.0%
! CCGTTTCCTTTTGCCTCGTT+GGG - Chr2:72388310-72388329 None:intergenic 50.0%
! CTACACTGGTTGTCCCTCTT+TGG + Chr2:72390383-72390402 MsG0280010619.01.T01:CDS 50.0%
! GCAACAGAAGCATGCCTCTA+GGG + Chr2:72392021-72392040 MsG0280010619.01.T01:CDS 50.0%
! GCTCCAAATGTTGATTGCGG+CGG - Chr2:72390512-72390531 None:intergenic 50.0%
! GGATCGAGGAGAGTACATTG+AGG + Chr2:72388252-72388271 MsG0280010619.01.T01:intron 50.0%
! GTAGCGGGATTCCACATTCT+CGG + Chr2:72389464-72389483 MsG0280010619.01.T01:CDS 50.0%
! TGACTCTGAGGAAACCCTAG+AGG - Chr2:72392038-72392057 None:intergenic 50.0%
! TGCAACAGAAGCATGCCTCT+AGG + Chr2:72392020-72392039 MsG0280010619.01.T01:CDS 50.0%
!! CTTTTGCCTCGTTGGGTTGT+GGG - Chr2:72388303-72388322 None:intergenic 50.0%
AACAACATAGGAGGGCAGGG+TGG + Chr2:72388137-72388156 MsG0280010619.01.T01:intron 55.0%
ACCCAGCTCGGATAGTAACG+AGG - Chr2:72390793-72390812 None:intergenic 55.0%
ACCCTCGTTACTATCCGAGC+TGG + Chr2:72390788-72390807 MsG0280010619.01.T01:intron 55.0%
ACTTATCGCAGAGGAGCGAG+CGG - Chr2:72390245-72390264 None:intergenic 55.0%
CAACGTTTCTTGGGGGTAGC+GGG + Chr2:72389449-72389468 MsG0280010619.01.T01:CDS 55.0%
CCACAACCCAACGAGGCAAA+AGG + Chr2:72388301-72388320 MsG0280010619.01.T01:intron 55.0%
CCCAGCTCGGATAGTAACGA+GGG - Chr2:72390792-72390811 None:intergenic 55.0%
CCCTCGTTACTATCCGAGCT+GGG + Chr2:72390789-72390808 MsG0280010619.01.T01:intron 55.0%
GATACGCAGGATCACACGCA+GGG + Chr2:72386687-72386706 MsG0280010619.01.T01:intron 55.0%
GCAACGTTTCTTGGGGGTAG+CGG + Chr2:72389448-72389467 MsG0280010619.01.T01:intron 55.0%
GGGTGCTTGTCCTCAAGCAA+GGG + Chr2:72392184-72392203 MsG0280010619.01.T01:CDS 55.0%
GGGTGGTCTAGACTGTTCGA+TGG + Chr2:72388154-72388173 MsG0280010619.01.T01:intron 55.0%
GGTCGAAGAGGCAATGAGCA+TGG - Chr2:72390900-72390919 None:intergenic 55.0%
GGTGTCCGACACAAACACAG+AGG + Chr2:72389578-72389597 MsG0280010619.01.T01:intron 55.0%
TCGTTACTATCCGAGCTGGG+TGG + Chr2:72390792-72390811 MsG0280010619.01.T01:intron 55.0%
TTATGTGCGTCCACCCAGCT+CGG - Chr2:72390805-72390824 None:intergenic 55.0%
TTTCCATCATCAGGGGCTGG+TGG + Chr2:72391936-72391955 MsG0280010619.01.T01:CDS 55.0%
! AGGGTGCTTGTCCTCAAGCA+AGG + Chr2:72392183-72392202 MsG0280010619.01.T01:CDS 55.0%
! GCGAATGACAAGTTGGGCGA+AGG + Chr2:72390564-72390583 MsG0280010619.01.T01:CDS 55.0%
!! CCTTTTGCCTCGTTGGGTTG+TGG - Chr2:72388304-72388323 None:intergenic 55.0%
!! GGAAGAGCACCTGTTGTGAG+AGG + Chr2:72391149-72391168 MsG0280010619.01.T01:intron 55.0%
AGGGGCTGACCTCTCACAAC+AGG - Chr2:72391161-72391180 None:intergenic 60.0%
CGATACGCAGGATCACACGC+AGG + Chr2:72386686-72386705 MsG0280010619.01.T01:intron 60.0%
CTGGGTGGACGCACATAAGG+CGG + Chr2:72390807-72390826 MsG0280010619.01.T01:intron 60.0%
CTTATCGCAGAGGAGCGAGC+GGG - Chr2:72390244-72390263 None:intergenic 60.0%
GAGCTGGGTGGACGCACATA+AGG + Chr2:72390804-72390823 MsG0280010619.01.T01:intron 60.0%
GATCCACCAGCCCCTGATGA+TGG - Chr2:72391942-72391961 None:intergenic 60.0%
TTATCGCAGAGGAGCGAGCG+GGG - Chr2:72390243-72390262 None:intergenic 60.0%
! CAGGGCGCACTGACCAAGAA+CGG + Chr2:72386776-72386795 MsG0280010619.01.T01:intron 60.0%
! TTGCCTCGTTGGGTTGTGGG+AGG - Chr2:72388300-72388319 None:intergenic 60.0%
ACACGCAGGGTGCGTGTACG+AGG + Chr2:72386700-72386719 MsG0280010619.01.T01:intron 65.0%
CACGCAGGGTGCGTGTACGA+GGG + Chr2:72386701-72386720 MsG0280010619.01.T01:intron 65.0%
GAGGGGGCCGGTCTATGTGA+AGG + Chr2:72391483-72391502 MsG0280010619.01.T01:intron 65.0%
TGGCCTCCCACAACCCAACG+AGG + Chr2:72388294-72388313 MsG0280010619.01.T01:intron 65.0%
Chromosome Type Strat End Strand Name
Chr2 gene 72386165 72393197 72386165 ID=MsG0280010619.01;Name=MsG0280010619.01
Chr2 mRNA 72386165 72393197 72386165 ID=MsG0280010619.01.T01;Parent=MsG0280010619.01;Name=MsG0280010619.01.T01;_AED=0.42;_eAED=0.42;_QI=0|0.2|0.16|0.83|0.4|0.5|6|0|414
Chr2 exon 72386165 72386233 72386165 ID=MsG0280010619.01.T01:exon:19536;Parent=MsG0280010619.01.T01
Chr2 exon 72389230 72389334 72389230 ID=MsG0280010619.01.T01:exon:19537;Parent=MsG0280010619.01.T01
Chr2 exon 72389449 72389490 72389449 ID=MsG0280010619.01.T01:exon:19538;Parent=MsG0280010619.01.T01
Chr2 exon 72390150 72390710 72390150 ID=MsG0280010619.01.T01:exon:19539;Parent=MsG0280010619.01.T01
Chr2 exon 72391903 72392249 72391903 ID=MsG0280010619.01.T01:exon:19540;Parent=MsG0280010619.01.T01
Chr2 exon 72393077 72393197 72393077 ID=MsG0280010619.01.T01:exon:19541;Parent=MsG0280010619.01.T01
Chr2 CDS 72386165 72386233 72386165 ID=MsG0280010619.01.T01:cds;Parent=MsG0280010619.01.T01
Chr2 CDS 72389230 72389334 72389230 ID=MsG0280010619.01.T01:cds;Parent=MsG0280010619.01.T01
Chr2 CDS 72389449 72389490 72389449 ID=MsG0280010619.01.T01:cds;Parent=MsG0280010619.01.T01
Chr2 CDS 72390150 72390710 72390150 ID=MsG0280010619.01.T01:cds;Parent=MsG0280010619.01.T01
Chr2 CDS 72391903 72392249 72391903 ID=MsG0280010619.01.T01:cds;Parent=MsG0280010619.01.T01
Chr2 CDS 72393077 72393197 72393077 ID=MsG0280010619.01.T01:cds;Parent=MsG0280010619.01.T01
Gene Sequence

>MsG0280010619.01.T01

ATGAAGATCAAAGTATCAAATGCGTTGAAAAGAGGACAGCCTTTACGCAATGCAGTATGGACTTTACTTAAAACCATCATCAATCTTAATGCAACTGCTATATTTCTATACGTCATGTGTATAGTTATAGCTTTCATGTCACACTCAACCTACCTTGCTTGTTGCTACTATATGCAACGTTTCTTGGGGGTAGCGGGATTCCACATTCTCGGTTTGAGCTGTGTTTACTGCAAGCCTGATTCCGCTCGTCTTTGCTTGCATTGTGATGGGATTGTCCACTCTGCAAATTCTCTGTCTCGCAGGCATCCCCGCTCGCTCCTCTGCGATAAGTGTAATTTCGACTCAGCAATCGTCCGCTGCGTCGATCATAAATTGTCTCTCTGTCAAGTTTGTGATTGGAATACAAATGACTGTTTTGTATTGGGACATAAACATGTGCTACTCACTTTCTACACTGGTTGTCCCTCTTTGGCAGACTTATCTAAGATTTGGCCACATTTGGTTGATGCAAATTCATCAAATGCTGCTTGGGAATCACCTAGTACTAGTGCTTTGCCTAAAACTGAAATCAGTGACCGCCGCAATCAACATTTGGAGCAGAAACCCGAAAAGAATGGCTTCGTTGGTTTGGCGAATGACAAGTTGGGCGAAGGAGATCCATGTGTCAAATATGAACCTTGGATTGAAAATTCTCCTATTATTCCATCAAATTCAAACTGCACACAATACTTCAAAGATCAAGCATTTTTATTTAATCAAGACTCAAACCAACCGAAGGCTTCTTCATCAGTTCAACAAGATTGTATGATTTTTCCATCATCAGGGGCTGGTGGATCAACAAATTTGATGCAGGGCATCAACAATGGTGCAAATTGTGCACTTATGACTCCTAGTTGCAACAGAAGCATGCCTCTAGGGTTTCCTCAGAGTCAAACTCATTCAGGCATATCAATTCAATTACCTAACATAAATGGTGAAAGCAGTGTTACCGAACTTCTAGATTGTGCGTTACCTCCAGTGTTTCATCCTGGTGAATCGCATTGGGAATCAAATTTGGAGGGTGCTTGTCCTCAAGCAAGGGATAAAGCCAAAATGAGATACCAAGAGAAAAAGAAAACTCGAACGTTTGGTAAGCAAATAAGATATGCGTCTCGCAAAGCAAGGGCTGATACAAGAAAACGCGTGAAAGGTAGATTTGTTAAAGCAGGTGAAGCATATGACGATCCTCTTTTGAGCGACCACTAA
Protein sequence

>MsG0280010619.01.T01

MKIKVSNALKRGQPLRNAVWTLLKTIINLNATAIFLYVMCIVIAFMSHSTYLACCYYMQRFLGVAGFHILGLSCVYCKPDSARLCLHCDGIVHSANSLSRRHPRSLLCDKCNFDSAIVRCVDHKLSLCQVCDWNTNDCFVLGHKHVLLTFYTGCPSLADLSKIWPHLVDANSSNAAWESPSTSALPKTEISDRRNQHLEQKPEKNGFVGLANDKLGEGDPCVKYEPWIENSPIIPSNSNCTQYFKDQAFLFNQDSNQPKASSSVQQDCMIFPSSGAGGSTNLMQGINNGANCALMTPSCNRSMPLGFPQSQTHSGISIQLPNINGESSVTELLDCALPPVFHPGESHWESNLEGACPQARDKAKMRYQEKKKTRTFGKQIRYASRKARADTRKRVKGRFVKAGEAYDDPLLSDH*