AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0280010733.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280010733.01.T01 MTR_2g090365 95.513 156 7 0 42 197 298 453 2.85e-112 328
MsG0280010733.01.T01 MTR_2g078310 67.105 152 48 1 43 194 40 189 4.12e-63 195
MsG0280010733.01.T01 MTR_3g117270 57.047 149 61 2 45 192 44 190 9.22e-57 178
MsG0280010733.01.T01 MTR_3g117270 57.047 149 61 2 45 192 44 190 1.30e-56 178
MsG0280010733.01.T01 MTR_3g117280 52.500 160 73 2 38 196 15 172 1.38e-53 170
MsG0280010733.01.T01 MTR_3g117270 61.667 120 45 1 45 163 44 163 6.33e-49 157
MsG0280010733.01.T01 MTR_3g117270 61.667 120 45 1 45 163 44 163 8.48e-49 156
MsG0280010733.01.T01 MTR_5g097190 40.476 126 65 4 79 195 20 144 3.18e-20 87.0
MsG0280010733.01.T01 MTR_2g090360 82.222 45 3 1 1 40 421 465 1.61e-15 74.3
MsG0280010733.01.T01 MTR_2g090360 82.222 45 3 1 1 40 441 485 2.11e-15 73.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280010733.01.T01 AT4G22140 63.816 152 53 1 43 194 48 197 7.04e-66 202
MsG0280010733.01.T01 AT4G22140 63.816 152 53 1 43 194 48 197 9.84e-66 202
MsG0280010733.01.T01 AT4G22140 63.816 152 53 1 43 194 48 197 9.84e-66 202
MsG0280010733.01.T01 AT4G39100 51.124 178 83 3 21 197 19 193 2.60e-57 180
MsG0280010733.01.T01 AT4G04260 58.553 152 60 2 43 194 10 158 5.56e-53 168
MsG0280010733.01.T01 AT4G04260 58.553 152 60 2 43 194 23 171 9.41e-53 168
MsG0280010733.01.T01 AT4G39100 54.483 145 64 2 21 164 19 162 3.55e-48 155
MsG0280010733.01.T01 AT4G04260 61.000 100 39 0 43 142 41 140 1.10e-35 122

Find 45 sgRNAs with CRISPR-Local

Find 139 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAAATGTTCACCTGATTTAA+AGG 0.193987 2:+74023940 MsG0280010733.01.T01:CDS
TCCTGAGAATTTGGTGAGTA+TGG 0.208742 2:+74022010 MsG0280010733.01.T01:CDS
AAAGGCATGCCCACGCATTT+AGG 0.253844 2:-74023875 None:intergenic
AGTACAGAATTAAAATTTAC+AGG 0.253996 2:-74022089 None:intergenic
GCGTTGCCATCCTGAGAATT+TGG 0.319880 2:+74022001 MsG0280010733.01.T01:CDS
TTCACCTGATTTAAAGGATT+AGG 0.322143 2:+74023946 MsG0280010733.01.T01:CDS
TCACCTGATTTAAAGGATTA+GGG 0.322613 2:+74023947 MsG0280010733.01.T01:CDS
ACGATTACTTTAGCAGGTTC+TGG 0.332292 2:+74023435 MsG0280010733.01.T01:CDS
ATTAACCTATCCGGGTTATA+AGG 0.334701 2:-74023629 None:intergenic
TTATAACCCGGATAGGTTAA+TGG 0.355817 2:+74023631 MsG0280010733.01.T01:CDS
AATCAGAGGATGGAGGAAAC+TGG 0.360912 2:+74022062 MsG0280010733.01.T01:CDS
GATTTCATTGCTTCATCAAA+AGG 0.383487 2:-74023893 None:intergenic
ACTTACACTTCAACGCGTTC+AGG 0.403385 2:-74023485 None:intergenic
CACAGCACCATTAACCTATC+CGG 0.404617 2:-74023638 None:intergenic
AGTCCCTAATCCTTTAAATC+AGG 0.432271 2:-74023950 None:intergenic
AAAACATACGCGTCCTTCAA+TGG 0.453876 2:-74023291 None:intergenic
CCCATACTCACCAAATTCTC+AGG 0.460854 2:-74022011 None:intergenic
GTGCTAACGATTACTTTAGC+AGG 0.480077 2:+74023429 MsG0280010733.01.T01:CDS
AGGATAATATGAACAGAATG+AGG 0.500778 2:+74023234 MsG0280010733.01.T01:CDS
CGTCCTTCAATGGTTTCCTC+AGG 0.503827 2:-74023281 None:intergenic
CATAGTGCTGACACAATTGA+AGG 0.525786 2:+74023356 MsG0280010733.01.T01:CDS
TACATGAAGCTTGAAGTTGT+AGG 0.537934 2:+74023407 MsG0280010733.01.T01:CDS
CCTGAGAATTTGGTGAGTAT+GGG 0.549796 2:+74022011 MsG0280010733.01.T01:CDS
CGACCTGAGGAAACCATTGA+AGG 0.551081 2:+74023278 MsG0280010733.01.T01:CDS
ATCAGAGGATGGAGGAAACT+GGG 0.556538 2:+74022063 MsG0280010733.01.T01:CDS
GGTAAGTATTAATCAGAGGA+TGG 0.560622 2:+74022052 MsG0280010733.01.T01:CDS
GAATGAGGGTCTATGTAAGA+AGG 0.562196 2:+74023249 MsG0280010733.01.T01:CDS
CCGTGTGGAAAAGATTGAGC+AGG 0.565789 2:+74023214 MsG0280010733.01.T01:CDS
CAGGTACCATCCTAAATGCG+TGG 0.581382 2:+74023865 MsG0280010733.01.T01:intron
ACAGCACCATTAACCTATCC+GGG 0.588194 2:-74023637 None:intergenic
AGATGCCTTATAACCCGGAT+AGG 0.594661 2:+74023624 MsG0280010733.01.T01:CDS
GCATGCCCACGCATTTAGGA+TGG 0.615056 2:-74023871 None:intergenic
GGGAGTCAGAGGCGATCTTG+TGG 0.617629 2:+74022031 MsG0280010733.01.T01:CDS
TTGGTGAGTATGGGAGTCAG+AGG 0.623193 2:+74022020 MsG0280010733.01.T01:CDS
ATGTGAGATGCCTTATAACC+CGG 0.623493 2:+74023619 MsG0280010733.01.T01:CDS
TACTCACCAAATTCTCAGGA+TGG 0.623583 2:-74022007 None:intergenic
AAGTATTAATCAGAGGATGG+AGG 0.627703 2:+74022055 MsG0280010733.01.T01:CDS
AGGTACCATCCTAAATGCGT+GGG 0.636148 2:+74023866 MsG0280010733.01.T01:intron
TGTGTGGAAGTTGCAATCAA+AGG 0.645860 2:+74023657 MsG0280010733.01.T01:CDS
GGATAATATGAACAGAATGA+GGG 0.654950 2:+74023235 MsG0280010733.01.T01:CDS
TTGTGGTAAGTATTAATCAG+AGG 0.660821 2:+74022048 MsG0280010733.01.T01:CDS
ATAGTGCTGACACAATTGAA+GGG 0.668881 2:+74023357 MsG0280010733.01.T01:CDS
CAAACCAATCATAGCCCGTG+TGG 0.703357 2:+74023199 MsG0280010733.01.T01:CDS
AAGAAGGTATTATCGACCTG+AGG 0.704026 2:+74023265 MsG0280010733.01.T01:CDS
GATAGGTTAATGGTGCTGTG+TGG 0.736018 2:+74023641 MsG0280010733.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAGTTAAAGAAAATAAAAA+AGG + Chr2:74022511-74022530 MsG0280010733.01.T01:intron 10.0%
!! GAAAAATTAATTAGGTTTAA+TGG - Chr2:74022602-74022621 None:intergenic 15.0%
!!! AAACCTAATTAATTTTTCAT+AGG + Chr2:74022604-74022623 MsG0280010733.01.T01:intron 15.0%
!! AAAAAAAAAAAACGTTATGC+TGG - Chr2:74022395-74022414 None:intergenic 20.0%
!! AGTACAGAATTAAAATTTAC+AGG - Chr2:74022092-74022111 None:intergenic 20.0%
!! TAATCCTCAAATATTACAAA+CGG - Chr2:74022321-74022340 None:intergenic 20.0%
!! TAATGTTATATAGCATATCA+TGG + Chr2:74022214-74022233 MsG0280010733.01.T01:intron 20.0%
!! TGTATAATGAATTATTATGC+AGG + Chr2:74023704-74023723 MsG0280010733.01.T01:intron 20.0%
!!! AAACACTGATATTTTTTTCT+AGG + Chr2:74023510-74023529 MsG0280010733.01.T01:intron 20.0%
!!! AACACTGATATTTTTTTCTA+GGG + Chr2:74023511-74023530 MsG0280010733.01.T01:intron 20.0%
!!! ATTTTACTTTTATGTTTCGA+AGG + Chr2:74023588-74023607 MsG0280010733.01.T01:intron 20.0%
! AAAAGGAACAAATACACAAT+CGG + Chr2:74022703-74022722 MsG0280010733.01.T01:intron 25.0%
! AAAATGTTCACCTGATTTAA+AGG + Chr2:74023940-74023959 MsG0280010733.01.T01:CDS 25.0%
! AAGTAGATAGTTCAAAAACA+TGG + Chr2:74022830-74022849 MsG0280010733.01.T01:intron 25.0%
! AATCCTCAAATATTACAAAC+GGG - Chr2:74022320-74022339 None:intergenic 25.0%
! ATATCAATTATTGTGAGGAA+AGG + Chr2:74022433-74022452 MsG0280010733.01.T01:intron 25.0%
! ATGCTATATAACATTATTGC+CGG - Chr2:74022210-74022229 None:intergenic 25.0%
! CGAATATATCAATTATTGTG+AGG + Chr2:74022428-74022447 MsG0280010733.01.T01:intron 25.0%
! CTGCCTATGAAAAATTAATT+AGG - Chr2:74022610-74022629 None:intergenic 25.0%
! GAAATATTTCAATTTCTTGC+AGG + Chr2:74023846-74023865 MsG0280010733.01.T01:intron 25.0%
!! ATCAAAGGTAAATTGGATTT+TGG + Chr2:74023672-74023691 MsG0280010733.01.T01:intron 25.0%
!! ATTTGAAGCAATTTGCTTAA+CGG - Chr2:74022787-74022806 None:intergenic 25.0%
!! TCAAAGGTAAATTGGATTTT+GGG + Chr2:74023673-74023692 MsG0280010733.01.T01:intron 25.0%
!! TTCTTTTGAATAGATTCATG+TGG - Chr2:74022466-74022485 None:intergenic 25.0%
!!! ACACTGATATTTTTTTCTAG+GGG + Chr2:74023512-74023531 MsG0280010733.01.T01:intron 25.0%
!!! ATTTTAATTCTGTACTTGAG+AGG + Chr2:74022096-74022115 MsG0280010733.01.T01:CDS 25.0%
AAAAGGAATTACCTAATCGA+TGG + Chr2:74022528-74022547 MsG0280010733.01.T01:intron 30.0%
AGATCTGTAAGGAAATAAAC+TGG - Chr2:74023819-74023838 None:intergenic 30.0%
AGGATAATATGAACAGAATG+AGG + Chr2:74023234-74023253 MsG0280010733.01.T01:CDS 30.0%
AGTTGCAATCAAAGGTAAAT+TGG + Chr2:74023665-74023684 MsG0280010733.01.T01:intron 30.0%
ATCCTCAAATATTACAAACG+GGG - Chr2:74022319-74022338 None:intergenic 30.0%
GATTTCATTGCTTCATCAAA+AGG - Chr2:74023896-74023915 None:intergenic 30.0%
GGATAATATGAACAGAATGA+GGG + Chr2:74023235-74023254 MsG0280010733.01.T01:CDS 30.0%
TAGAATGTACAAAGTTCGAT+AGG + Chr2:74022119-74022138 MsG0280010733.01.T01:intron 30.0%
TGAATGTATGATGCCAAATA+AGG - Chr2:74023731-74023750 None:intergenic 30.0%
TTATTATGCAGGACCTTATT+TGG + Chr2:74023715-74023734 MsG0280010733.01.T01:intron 30.0%
TTGTGGTAAGTATTAATCAG+AGG + Chr2:74022048-74022067 MsG0280010733.01.T01:CDS 30.0%
TTTCTGTCATAAGATCTGTA+AGG - Chr2:74023830-74023849 None:intergenic 30.0%
! TTTGAAGCAATTTGCTTAAC+GGG - Chr2:74022786-74022805 None:intergenic 30.0%
!! TTTAAGAAGTATTGCTGTGT+TGG + Chr2:74023784-74023803 MsG0280010733.01.T01:intron 30.0%
!!! GTTTTAAATTGCACTGATTG+TGG - Chr2:74023076-74023095 None:intergenic 30.0%
AAGTATTAATCAGAGGATGG+AGG + Chr2:74022055-74022074 MsG0280010733.01.T01:CDS 35.0%
ATAGTAAAGTGCACATTGCT+AGG - Chr2:74022259-74022278 None:intergenic 35.0%
ATTAACCTATCCGGGTTATA+AGG - Chr2:74023632-74023651 None:intergenic 35.0%
GGTAAGTATTAATCAGAGGA+TGG + Chr2:74022052-74022071 MsG0280010733.01.T01:CDS 35.0%
TACATGAAGCTTGAAGTTGT+AGG + Chr2:74023407-74023426 MsG0280010733.01.T01:CDS 35.0%
TCCTCAAATATTACAAACGG+GGG - Chr2:74022318-74022337 None:intergenic 35.0%
TCTGTTTGAATAACAGTGTC+CGG + Chr2:74022188-74022207 MsG0280010733.01.T01:intron 35.0%
TTATAACCCGGATAGGTTAA+TGG + Chr2:74023631-74023650 MsG0280010733.01.T01:CDS 35.0%
! CGTATGTTTTCATGGAGATA+AGG + Chr2:74023304-74023323 MsG0280010733.01.T01:CDS 35.0%
! TCTGGTACAATGCTTTTACT+GGG + Chr2:74023453-74023472 MsG0280010733.01.T01:CDS 35.0%
! TTCTGGTACAATGCTTTTAC+TGG + Chr2:74023452-74023471 MsG0280010733.01.T01:CDS 35.0%
!! ATAGTGCTGACACAATTGAA+GGG + Chr2:74023357-74023376 MsG0280010733.01.T01:CDS 35.0%
AAAACATACGCGTCCTTCAA+TGG - Chr2:74023294-74023313 None:intergenic 40.0%
AAAGTTCGATAGGTCTCCAT+AGG + Chr2:74022129-74022148 MsG0280010733.01.T01:intron 40.0%
AAGTTCGATAGGTCTCCATA+GGG + Chr2:74022130-74022149 MsG0280010733.01.T01:intron 40.0%
ACGATTACTTTAGCAGGTTC+TGG + Chr2:74023435-74023454 MsG0280010733.01.T01:CDS 40.0%
AGAACATAATGGCGACAACA+AGG + Chr2:74022674-74022693 MsG0280010733.01.T01:intron 40.0%
AGGAACAAATACACAATCGG+AGG + Chr2:74022706-74022725 MsG0280010733.01.T01:intron 40.0%
ATGTGAGATGCCTTATAACC+CGG + Chr2:74023619-74023638 MsG0280010733.01.T01:CDS 40.0%
ATTGCAGTGCAATGTTGAAG+AGG - Chr2:74022910-74022929 None:intergenic 40.0%
CAGCAACCTACAGAACATAA+TGG + Chr2:74022663-74022682 MsG0280010733.01.T01:intron 40.0%
CTATGTAAACGACGCTGATA+TGG - Chr2:74023110-74023129 None:intergenic 40.0%
GAATGAGGGTCTATGTAAGA+AGG + Chr2:74023249-74023268 MsG0280010733.01.T01:CDS 40.0%
GTGCTAACGATTACTTTAGC+AGG + Chr2:74023429-74023448 MsG0280010733.01.T01:CDS 40.0%
TACTCACCAAATTCTCAGGA+TGG - Chr2:74022010-74022029 None:intergenic 40.0%
TCCCCCGTTTGTAATATTTG+AGG + Chr2:74022314-74022333 MsG0280010733.01.T01:intron 40.0%
TGGTGTGGTTACGAATAATG+TGG - Chr2:74022963-74022982 None:intergenic 40.0%
TGTGTGGAAGTTGCAATCAA+AGG + Chr2:74023657-74023676 MsG0280010733.01.T01:CDS 40.0%
TTATGTTCTGTAGGTTGCTG+CGG - Chr2:74022663-74022682 None:intergenic 40.0%
TTGTCGCCATTATGTTCTGT+AGG - Chr2:74022672-74022691 None:intergenic 40.0%
! AAGCAATTTGCTTAACGGGA+AGG - Chr2:74022782-74022801 None:intergenic 40.0%
! AGTTTGCTCCACAGTTGTTA+GGG - Chr2:74022998-74023017 None:intergenic 40.0%
! CCTGAGAATTTGGTGAGTAT+GGG + Chr2:74022011-74022030 MsG0280010733.01.T01:CDS 40.0%
! CTGGTACAATGCTTTTACTG+GGG + Chr2:74023454-74023473 MsG0280010733.01.T01:CDS 40.0%
! GCTTCAAATCGTTCCTTTTG+CGG + Chr2:74022798-74022817 MsG0280010733.01.T01:intron 40.0%
! TAAAATCGACGCCATCGATT+AGG - Chr2:74022542-74022561 None:intergenic 40.0%
! TCCACAGTTGTTAGGGTTTT+GGG - Chr2:74022991-74023010 None:intergenic 40.0%
! TCCTGAGAATTTGGTGAGTA+TGG + Chr2:74022010-74022029 MsG0280010733.01.T01:CDS 40.0%
!! AAGAAGGTATTATCGACCTG+AGG + Chr2:74023265-74023284 MsG0280010733.01.T01:CDS 40.0%
!! CATAGTGCTGACACAATTGA+AGG + Chr2:74023356-74023375 MsG0280010733.01.T01:CDS 40.0%
!! CGCATTCTGTTTCTGAGAAA+GGG - Chr2:74022640-74022659 None:intergenic 40.0%
!! TAAGGAGAGAAGGGTTTTGA+GGG - Chr2:74022757-74022776 None:intergenic 40.0%
AATCAGAGGATGGAGGAAAC+TGG + Chr2:74022062-74022081 MsG0280010733.01.T01:CDS 45.0%
ACAGCACCATTAACCTATCC+GGG - Chr2:74023640-74023659 None:intergenic 45.0%
ACTTACACTTCAACGCGTTC+AGG - Chr2:74023488-74023507 None:intergenic 45.0%
ACTTCACTCGATTCCGCAAA+AGG - Chr2:74022814-74022833 None:intergenic 45.0%
AGATGCCTTATAACCCGGAT+AGG + Chr2:74023624-74023643 MsG0280010733.01.T01:CDS 45.0%
AGGTACCATCCTAAATGCGT+GGG + Chr2:74023866-74023885 MsG0280010733.01.T01:intron 45.0%
AGTTCGATAGGTCTCCATAG+GGG + Chr2:74022131-74022150 MsG0280010733.01.T01:intron 45.0%
ATAATGGCGACAACAAGGCA+AGG + Chr2:74022679-74022698 MsG0280010733.01.T01:intron 45.0%
ATCAGAGGATGGAGGAAACT+GGG + Chr2:74022063-74022082 MsG0280010733.01.T01:CDS 45.0%
ATTACCTCTAACGACCGTGT+TGG - Chr2:74022734-74022753 None:intergenic 45.0%
CACAGCACCATTAACCTATC+CGG - Chr2:74023641-74023660 None:intergenic 45.0%
CCCATACTCACCAAATTCTC+AGG - Chr2:74022014-74022033 None:intergenic 45.0%
CTGCCATAACAGCGAAATTG+CGG - Chr2:74022887-74022906 None:intergenic 45.0%
TAATGGCGACAACAAGGCAA+GGG + Chr2:74022680-74022699 MsG0280010733.01.T01:intron 45.0%
! CAGTTTGCTCCACAGTTGTT+AGG - Chr2:74022999-74023018 None:intergenic 45.0%
! CCACAGTTGTTAGGGTTTTG+GGG - Chr2:74022990-74023009 None:intergenic 45.0%
! CCTGCTCAATCTTTTCCACA+CGG - Chr2:74023217-74023236 None:intergenic 45.0%
! CTCCACAGTTGTTAGGGTTT+TGG - Chr2:74022992-74023011 None:intergenic 45.0%
! CTGCTCAATCTTTTCCACAC+GGG - Chr2:74023216-74023235 None:intergenic 45.0%
! GAAGGACGCGTATGTTTTCA+TGG + Chr2:74023296-74023315 MsG0280010733.01.T01:CDS 45.0%
! GTAAGGAGAGAAGGGTTTTG+AGG - Chr2:74022758-74022777 None:intergenic 45.0%
! TGTGTTTTGCTACGCCATAC+TGG + Chr2:74023170-74023189 MsG0280010733.01.T01:intron 45.0%
! TTGCTTAACGGGAAGGTGTA+AGG - Chr2:74022775-74022794 None:intergenic 45.0%
!! GATAGGTTAATGGTGCTGTG+TGG + Chr2:74023641-74023660 MsG0280010733.01.T01:CDS 45.0%
!! GCGCATTCTGTTTCTGAGAA+AGG - Chr2:74022641-74022660 None:intergenic 45.0%
!! TTGGTTTGTTCCTGCCAGTA+TGG - Chr2:74023187-74023206 None:intergenic 45.0%
!! TTTTCCACACGGGCTATGAT+TGG - Chr2:74023206-74023225 None:intergenic 45.0%
!!! TGTTAGGGTTTTGGGGTAGT+TGG - Chr2:74022983-74023002 None:intergenic 45.0%
CAAACCAATCATAGCCCGTG+TGG + Chr2:74023199-74023218 MsG0280010733.01.T01:CDS 50.0%
CAGCCGCAATTTCGCTGTTA+TGG + Chr2:74022881-74022900 MsG0280010733.01.T01:intron 50.0%
CAGGTACCATCCTAAATGCG+TGG + Chr2:74023865-74023884 MsG0280010733.01.T01:intron 50.0%
CCCCAAAACCCTAACAACTG+TGG + Chr2:74022987-74023006 MsG0280010733.01.T01:intron 50.0%
CCGTGTGGAAAAGATTGAGC+AGG + Chr2:74023214-74023233 MsG0280010733.01.T01:CDS 50.0%
CGAAATTGCGGCTGCAATTG+CGG - Chr2:74022875-74022894 None:intergenic 50.0%
CGACAACAAGGCAAGGGAAA+AGG + Chr2:74022686-74022705 MsG0280010733.01.T01:intron 50.0%
CGACCTGAGGAAACCATTGA+AGG + Chr2:74023278-74023297 MsG0280010733.01.T01:CDS 50.0%
CGTCCTTCAATGGTTTCCTC+AGG - Chr2:74023284-74023303 None:intergenic 50.0%
GACACACATTGCGGTCATTG+TGG - Chr2:74023046-74023065 None:intergenic 50.0%
GCGTTGCCATCCTGAGAATT+TGG + Chr2:74022001-74022020 MsG0280010733.01.T01:CDS 50.0%
TTGGTGAGTATGGGAGTCAG+AGG + Chr2:74022020-74022039 MsG0280010733.01.T01:CDS 50.0%
! AAAGGCATGCCCACGCATTT+AGG - Chr2:74023878-74023897 None:intergenic 50.0%
! GGGAAGGTGTAAGGAGAGAA+GGG - Chr2:74022766-74022785 None:intergenic 50.0%
! TTTTGCTACGCCATACTGGC+AGG + Chr2:74023174-74023193 MsG0280010733.01.T01:intron 50.0%
CGATAGGTCTCCATAGGGGA+TGG + Chr2:74022135-74022154 MsG0280010733.01.T01:intron 55.0%
GCATGCCCACGCATTTAGGA+TGG - Chr2:74023874-74023893 None:intergenic 55.0%
GGATGCTGCGACACACATTG+CGG - Chr2:74023055-74023074 None:intergenic 55.0%
GTCTCCATAGGGGATGGTCA+GGG + Chr2:74022141-74022160 MsG0280010733.01.T01:intron 55.0%
TTCACCCTGACCATCCCCTA+TGG - Chr2:74022148-74022167 None:intergenic 55.0%
! CGGGAAGGTGTAAGGAGAGA+AGG - Chr2:74022767-74022786 None:intergenic 55.0%
!! CACAATCGGAGGCACCAACA+CGG + Chr2:74022717-74022736 MsG0280010733.01.T01:intron 55.0%
!!! GGGTTTTGGGGTAGTTGGTG+TGG - Chr2:74022978-74022997 None:intergenic 55.0%
GGCACCAACACGGTCGTTAG+AGG + Chr2:74022727-74022746 MsG0280010733.01.T01:intron 60.0%
GGGAGTCAGAGGCGATCTTG+TGG + Chr2:74022031-74022050 MsG0280010733.01.T01:CDS 60.0%
GGTCTCCATAGGGGATGGTC+AGG + Chr2:74022140-74022159 MsG0280010733.01.T01:intron 60.0%
TGCGGCTGCAATTGCGGTTG+CGG - Chr2:74022869-74022888 None:intergenic 60.0%
GCGGCTGCAATTGCGGTTGC+GGG - Chr2:74022868-74022887 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
Chr2 gene 74021999 74023967 74021999 ID=MsG0280010733.01;Name=MsG0280010733.01
Chr2 mRNA 74021999 74023967 74021999 ID=MsG0280010733.01.T01;Parent=MsG0280010733.01;Name=MsG0280010733.01.T01;_AED=0.47;_eAED=0.47;_QI=0|0|0|1|1|1|4|0|197
Chr2 exon 74021999 74022117 74021999 ID=MsG0280010733.01.T01:exon:7417;Parent=MsG0280010733.01.T01
Chr2 exon 74023196 74023501 74023196 ID=MsG0280010733.01.T01:exon:7418;Parent=MsG0280010733.01.T01
Chr2 exon 74023610 74023678 74023610 ID=MsG0280010733.01.T01:exon:7419;Parent=MsG0280010733.01.T01
Chr2 exon 74023868 74023967 74023868 ID=MsG0280010733.01.T01:exon:7420;Parent=MsG0280010733.01.T01
Chr2 CDS 74021999 74022117 74021999 ID=MsG0280010733.01.T01:cds;Parent=MsG0280010733.01.T01
Chr2 CDS 74023196 74023501 74023196 ID=MsG0280010733.01.T01:cds;Parent=MsG0280010733.01.T01
Chr2 CDS 74023610 74023678 74023610 ID=MsG0280010733.01.T01:cds;Parent=MsG0280010733.01.T01
Chr2 CDS 74023868 74023967 74023868 ID=MsG0280010733.01.T01:cds;Parent=MsG0280010733.01.T01
Gene Sequence

>MsG0280010733.01.T01

ATGCGTTGCCATCCTGAGAATTTGGTGAGTATGGGAGTCAGAGGCGATCTTGTGGTAAGTATTAATCAGAGGATGGAGGAAACTGGGCAGCCTGTAAATTTTAATTCTGTACTTGAGAGGAACAAACCAATCATAGCCCGTGTGGAAAAGATTGAGCAGGATAATATGAACAGAATGAGGGTCTATGTAAGAAGGTATTATCGACCTGAGGAAACCATTGAAGGACGCGTATGTTTTCATGGAGATAAGGAGCTGTTTTTGTCTAATCATTATGATGTTCATAGTGCTGACACAATTGAAGGGAAGTGTTTTGTGCACACTTTGAAGAACTACATGAAGCTTGAAGTTGTAGGTGCTAACGATTACTTTAGCAGGTTCTGGTACAATGCTTTTACTGGGGCTATGACACCTGAACGCGTTGAAGTGTTGTGCAAATGTGAGATGCCTTATAACCCGGATAGGTTAATGGTGCTGTGTGGAAGTTGCAATCAAAGGTACCATCCTAAATGCGTGGGCATGCCTTTTGATGAAGCAATGAAATCAGAACATTTTAGATTTGTTTGTTCAAAATGTTCACCTGATTTAAAGGATTAG
Protein sequence

>MsG0280010733.01.T01

MRCHPENLVSMGVRGDLVVSINQRMEETGQPVNFNSVLERNKPIIARVEKIEQDNMNRMRVYVRRYYRPEETIEGRVCFHGDKELFLSNHYDVHSADTIEGKCFVHTLKNYMKLEVVGANDYFSRFWYNAFTGAMTPERVEVLCKCEMPYNPDRLMVLCGSCNQRYHPKCVGMPFDEAMKSEHFRFVCSKCSPDLKD*