AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0280011153.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280011153.01.T01 MTR_2g099740 91.341 358 22 5 31 381 46 401 0.0 600
MsG0280011153.01.T01 MTR_8g017500 46.221 344 130 19 31 367 46 341 4.94e-66 213
MsG0280011153.01.T01 MTR_8g017440 60.748 214 64 12 31 236 46 247 4.14e-62 203
MsG0280011153.01.T01 MTR_8g017390 51.399 286 102 16 31 305 47 306 6.99e-62 206
MsG0280011153.01.T01 MTR_8g017540 47.840 324 121 18 31 351 92 370 1.01e-61 203
MsG0280011153.01.T01 MTR_8g017340 52.113 284 110 17 31 305 47 313 1.35e-61 206
MsG0280011153.01.T01 MTR_8g017350 52.113 284 110 17 31 305 47 313 3.45e-60 205
MsG0280011153.01.T01 MTR_2g064160 71.429 91 26 0 31 121 45 135 2.20e-39 142
MsG0280011153.01.T01 MTR_1g112760 50.000 156 65 3 31 178 47 197 6.42e-39 139
MsG0280011153.01.T01 MTR_4g105130 77.500 80 18 0 31 110 46 125 2.74e-38 141
MsG0280011153.01.T01 MTR_3g028740 72.414 87 22 1 17 101 40 126 3.58e-38 140
MsG0280011153.01.T01 MTR_4g065017 51.049 143 59 3 21 160 39 173 5.31e-38 139
MsG0280011153.01.T01 MTR_3g077110 76.250 80 19 0 31 110 46 125 2.08e-37 138
MsG0280011153.01.T01 MTR_7g110830 67.045 88 29 0 31 118 46 133 1.10e-36 137
MsG0280011153.01.T01 MTR_2g097910 72.289 83 21 1 21 101 42 124 1.42e-36 135
MsG0280011153.01.T01 MTR_1g085040 67.045 88 29 0 31 118 46 133 2.46e-36 136
MsG0280011153.01.T01 MTR_8g098860 62.766 94 30 1 11 104 31 119 6.11e-36 134
MsG0280011153.01.T01 MTR_1g085640 64.773 88 31 0 31 118 46 133 1.13e-35 134
MsG0280011153.01.T01 MTR_7g076740 67.500 80 26 0 31 110 47 126 8.57e-34 127
MsG0280011153.01.T01 MTR_8g031360 50.893 112 46 1 31 142 48 150 2.20e-33 126
MsG0280011153.01.T01 MTR_5g007370 66.250 80 27 0 31 110 46 125 2.49e-33 126
MsG0280011153.01.T01 MTR_8g095390 64.286 84 30 0 27 110 42 125 2.91e-33 126
MsG0280011153.01.T01 MTR_3g097450 61.111 90 35 0 27 116 42 131 4.08e-33 125
MsG0280011153.01.T01 MTR_3g074520 66.250 80 27 0 31 110 46 125 4.22e-33 127
MsG0280011153.01.T01 MTR_4g073420 54.455 101 41 1 10 110 30 125 4.77e-33 125
MsG0280011153.01.T01 MTR_5g029840 59.341 91 30 1 31 121 46 129 4.78e-33 126
MsG0280011153.01.T01 MTR_5g010020 63.529 85 26 1 11 95 31 110 6.67e-33 126
MsG0280011153.01.T01 MTR_4g485530 67.073 82 27 0 27 108 42 123 1.43e-32 121
MsG0280011153.01.T01 MTR_5g079670 64.634 82 29 0 27 108 41 122 1.45e-32 122
MsG0280011153.01.T01 MTR_2g011660 60.440 91 29 1 31 121 47 130 1.80e-32 125
MsG0280011153.01.T01 MTR_4g091490 55.046 109 35 2 31 139 47 141 1.81e-32 125
MsG0280011153.01.T01 MTR_4g478180 65.000 80 28 0 31 110 47 126 1.83e-32 125
MsG0280011153.01.T01 MTR_7g111290 70.930 86 25 0 31 116 4 89 2.82e-32 124
MsG0280011153.01.T01 MTR_4g121460 36.041 197 96 4 31 213 46 226 5.15e-32 124
MsG0280011153.01.T01 MTR_2g089620 52.778 108 44 1 31 131 46 153 6.62e-32 123
MsG0280011153.01.T01 MTR_7g111290 70.930 86 25 0 31 116 46 131 1.31e-31 123
MsG0280011153.01.T01 MTR_6g012690 44.000 150 62 4 31 160 46 193 3.19e-31 122
MsG0280011153.01.T01 MTR_7g115650 69.014 71 22 0 31 101 46 116 6.62e-31 117
MsG0280011153.01.T01 MTR_7g011170 50.442 113 46 2 31 143 46 148 6.87e-31 120
MsG0280011153.01.T01 MTR_4g082290 65.000 80 28 0 31 110 46 125 8.04e-31 122
MsG0280011153.01.T01 MTR_7g035075 65.753 73 25 0 27 99 44 116 1.39e-30 116
MsG0280011153.01.T01 MTR_2g034790 67.606 71 23 0 31 101 46 116 1.43e-30 119
MsG0280011153.01.T01 MTR_1g100653 69.014 71 22 0 31 101 46 116 1.51e-30 119
MsG0280011153.01.T01 MTR_1g100667 70.423 71 21 0 31 101 47 117 1.74e-30 118
MsG0280011153.01.T01 MTR_2g089450 66.216 74 25 0 31 104 46 119 1.75e-30 117
MsG0280011153.01.T01 MTR_7g117730 66.197 71 24 0 31 101 46 116 3.43e-30 117
MsG0280011153.01.T01 MTR_6g006030 60.759 79 31 0 27 105 44 122 4.01e-30 115
MsG0280011153.01.T01 MTR_4g102380 63.750 80 29 0 31 110 46 125 4.43e-30 117
MsG0280011153.01.T01 MTR_4g125520 67.606 71 23 0 31 101 46 116 4.50e-30 117
MsG0280011153.01.T01 MTR_1g110460 62.162 74 28 0 27 100 56 129 5.50e-30 117
MsG0280011153.01.T01 MTR_3g065440 65.000 80 28 0 31 110 46 125 5.56e-30 117
MsG0280011153.01.T01 MTR_5g078140 65.000 80 28 0 31 110 46 125 5.62e-30 117
MsG0280011153.01.T01 MTR_4g100720 57.609 92 33 1 31 122 47 132 5.78e-30 114
MsG0280011153.01.T01 MTR_1g043050 66.667 72 24 0 31 102 46 117 7.15e-30 115
MsG0280011153.01.T01 MTR_4g082230 63.750 80 29 0 31 110 46 125 8.44e-30 119
MsG0280011153.01.T01 MTR_0251s0050 66.197 71 24 0 31 101 47 117 9.26e-30 116
MsG0280011153.01.T01 MTR_1g076150 69.014 71 22 0 31 101 46 116 1.11e-29 115
MsG0280011153.01.T01 MTR_3g461490 61.176 85 33 0 31 115 46 130 1.31e-29 117
MsG0280011153.01.T01 MTR_1g017000 61.644 73 28 0 31 103 47 119 2.29e-29 114
MsG0280011153.01.T01 MTR_6g009430 61.250 80 31 0 31 110 46 125 3.63e-29 115
MsG0280011153.01.T01 MTR_3g083540 58.750 80 33 0 31 110 75 154 3.64e-29 115
MsG0280011153.01.T01 MTR_4g063100 64.286 70 25 0 31 100 12 81 3.90e-29 113
MsG0280011153.01.T01 MTR_8g027345 66.197 71 24 0 31 101 46 116 4.25e-29 115
MsG0280011153.01.T01 MTR_6g055910 68.571 70 22 0 31 100 19 88 5.08e-29 113
MsG0280011153.01.T01 MTR_1g043080 65.278 72 25 0 31 102 46 117 5.25e-29 113
MsG0280011153.01.T01 MTR_0008s0390 65.278 72 25 0 31 102 47 118 5.73e-29 114
MsG0280011153.01.T01 MTR_1g045610 67.143 70 23 0 31 100 55 124 5.73e-29 113
MsG0280011153.01.T01 MTR_4g063100 64.286 70 25 0 31 100 41 110 6.82e-29 113
MsG0280011153.01.T01 MTR_2g089420 65.278 72 25 0 31 102 45 116 7.94e-29 117
MsG0280011153.01.T01 MTR_2g067420 70.769 65 19 0 31 95 48 112 1.70e-28 114
MsG0280011153.01.T01 MTR_8g020490 62.667 75 28 0 27 101 38 112 1.85e-28 112
MsG0280011153.01.T01 MTR_6g055910 68.571 70 22 0 31 100 48 117 2.53e-28 112
MsG0280011153.01.T01 MTR_8g042410 65.714 70 24 0 31 100 71 140 3.31e-28 116
MsG0280011153.01.T01 MTR_5g042030 61.250 80 31 0 31 110 41 120 4.42e-28 112
MsG0280011153.01.T01 MTR_7g096930 64.789 71 25 0 31 101 46 116 5.82e-28 111
MsG0280011153.01.T01 MTR_0008s0470 62.500 72 27 0 31 102 47 118 1.01e-27 110
MsG0280011153.01.T01 MTR_1g073170 64.286 70 25 0 31 100 54 123 1.46e-27 109
MsG0280011153.01.T01 MTR_3g011610 64.286 70 25 0 31 100 71 140 1.64e-27 114
MsG0280011153.01.T01 MTR_2g096380 47.573 103 48 2 31 129 21 121 1.76e-27 108
MsG0280011153.01.T01 MTR_1g086510 61.644 73 28 0 28 100 52 124 1.92e-27 109
MsG0280011153.01.T01 MTR_0197s0010 61.972 71 27 0 31 101 35 105 2.09e-27 108
MsG0280011153.01.T01 MTR_3g052430 64.286 70 25 0 31 100 75 144 2.89e-27 113
MsG0280011153.01.T01 MTR_4g057635 57.895 76 32 0 31 106 47 122 3.16e-27 110
MsG0280011153.01.T01 MTR_2g096380 47.573 103 48 2 31 129 40 140 4.10e-27 108
MsG0280011153.01.T01 MTR_7g010210 64.789 71 25 0 31 101 46 116 4.14e-27 110
MsG0280011153.01.T01 MTR_7g010210 64.789 71 25 0 31 101 46 116 4.30e-27 108
MsG0280011153.01.T01 MTR_1g017140 61.644 73 28 0 31 103 47 119 4.51e-27 110
MsG0280011153.01.T01 MTR_5g014990 59.459 74 30 0 31 104 47 120 4.85e-27 109
MsG0280011153.01.T01 MTR_7g087130 63.380 71 26 0 31 101 46 116 4.90e-27 110
MsG0280011153.01.T01 MTR_3g052450 62.857 70 26 0 31 100 74 143 5.20e-27 112
MsG0280011153.01.T01 MTR_1g021230 64.286 70 25 0 31 100 91 160 1.30e-26 110
MsG0280011153.01.T01 MTR_3g039990 42.969 128 56 3 31 142 47 173 2.44e-26 107
MsG0280011153.01.T01 MTR_3g103570 57.534 73 31 0 31 103 47 119 2.45e-26 108
MsG0280011153.01.T01 MTR_0008s0280 60.870 69 27 0 31 99 46 114 5.51e-26 104
MsG0280011153.01.T01 MTR_1g086530 58.571 70 29 0 31 100 67 136 7.17e-26 105
MsG0280011153.01.T01 MTR_0140s0030 59.155 71 29 0 31 101 47 117 1.15e-25 106
MsG0280011153.01.T01 MTR_0489s0020 59.155 71 29 0 31 101 47 117 1.15e-25 106
MsG0280011153.01.T01 MTR_6g090405 41.667 144 66 3 31 161 47 185 1.50e-25 104
MsG0280011153.01.T01 MTR_7g102110 58.904 73 30 0 31 103 47 119 2.51e-25 103
MsG0280011153.01.T01 MTR_0063s0090 42.623 122 59 3 31 147 46 161 4.02e-25 102
MsG0280011153.01.T01 MTR_7g109320 59.091 88 34 1 31 118 46 131 5.21e-25 104
MsG0280011153.01.T01 MTR_5g078910 57.143 77 33 0 27 103 37 113 5.23e-25 103
MsG0280011153.01.T01 MTR_7g017260 55.556 81 36 0 24 104 54 134 5.45e-25 103
MsG0280011153.01.T01 MTR_1g062940 47.959 98 41 2 4 101 23 110 7.27e-25 101
MsG0280011153.01.T01 MTR_6g012180 64.615 65 23 0 31 95 46 110 8.34e-25 103
MsG0280011153.01.T01 MTR_5g079120 45.763 118 57 2 31 142 95 211 8.75e-25 103
MsG0280011153.01.T01 MTR_2g088170 67.143 70 23 0 31 100 63 132 1.22e-24 105
MsG0280011153.01.T01 MTR_5g079290 53.846 78 36 0 27 104 47 124 2.07e-24 101
MsG0280011153.01.T01 MTR_5g079220 55.128 78 35 0 27 104 51 128 4.95e-24 100
MsG0280011153.01.T01 MTR_0001s0360 55.128 78 35 0 27 104 37 114 4.97e-24 100
MsG0280011153.01.T01 MTR_4g097570 64.062 64 23 0 31 94 48 111 1.10e-23 100
MsG0280011153.01.T01 MTR_4g097570 64.062 64 23 0 31 94 47 110 1.14e-23 100
MsG0280011153.01.T01 MTR_2g095520 57.971 69 29 0 27 95 43 111 1.22e-23 100
MsG0280011153.01.T01 MTR_8g006470 61.429 70 26 1 31 99 44 113 3.72e-23 98.2
MsG0280011153.01.T01 MTR_5g078800 56.944 72 31 0 31 102 41 112 8.85e-23 97.1
MsG0280011153.01.T01 MTR_4g128670 58.462 65 27 0 31 95 47 111 1.07e-22 98.2
MsG0280011153.01.T01 MTR_8g060940 57.746 71 30 0 27 97 37 107 1.27e-22 95.9
MsG0280011153.01.T01 MTR_0247s0040 58.824 68 28 0 31 98 41 108 1.39e-22 94.0
MsG0280011153.01.T01 MTR_1g083630 36.932 176 87 5 31 183 46 220 1.41e-22 100
MsG0280011153.01.T01 MTR_5g078930 38.849 139 73 2 31 157 43 181 1.53e-22 95.1
MsG0280011153.01.T01 MTR_5g078950 55.556 72 32 0 27 98 37 108 1.99e-22 95.9
MsG0280011153.01.T01 MTR_5g078860 54.167 72 33 0 31 102 41 112 3.69e-22 95.9
MsG0280011153.01.T01 MTR_2g033170 58.904 73 30 0 27 99 54 126 3.73e-22 96.3
MsG0280011153.01.T01 MTR_0193s0090 55.556 72 32 0 31 102 41 112 8.96e-22 92.8
MsG0280011153.01.T01 MTR_4g029540 60.000 70 27 1 31 99 44 113 1.24e-21 94.4
MsG0280011153.01.T01 MTR_3g463400 37.069 116 52 2 6 100 118 233 1.64e-21 95.9
MsG0280011153.01.T01 MTR_4g123040 59.722 72 29 0 28 99 55 126 3.34e-21 93.6
MsG0280011153.01.T01 MTR_4g094982 45.918 98 47 1 33 124 38 135 9.28e-21 91.3
MsG0280011153.01.T01 MTR_4g128190 51.429 70 33 1 31 99 32 101 1.15e-20 90.5
MsG0280011153.01.T01 MTR_5g088080 51.429 70 33 1 31 99 46 115 1.86e-20 90.5
MsG0280011153.01.T01 MTR_5g088150 51.429 70 33 1 31 99 46 115 1.86e-20 90.5
MsG0280011153.01.T01 MTR_5g488210 51.429 70 33 1 31 99 46 115 1.86e-20 90.5
MsG0280011153.01.T01 MTR_5g088640 51.429 70 33 1 31 99 46 115 2.04e-20 90.5
MsG0280011153.01.T01 MTR_5g488170 51.429 70 33 1 31 99 46 115 2.81e-20 89.4
MsG0280011153.01.T01 MTR_1g057980 41.121 107 47 3 33 124 113 218 2.99e-20 90.5
MsG0280011153.01.T01 MTR_5g070020 34.454 119 57 2 3 100 104 222 3.68e-20 91.3
MsG0280011153.01.T01 MTR_5g062790 48.101 79 39 2 31 108 43 120 9.77e-20 89.0
MsG0280011153.01.T01 MTR_4g019370 52.113 71 34 0 33 103 71 141 1.11e-19 89.7
MsG0280011153.01.T01 MTR_3g045430 47.126 87 46 0 31 117 47 133 1.27e-19 88.6
MsG0280011153.01.T01 MTR_5g016510 34.028 144 63 3 33 155 38 170 2.05e-19 88.2
MsG0280011153.01.T01 MTR_7g035350 54.545 66 30 0 33 98 258 323 2.50e-19 89.7
MsG0280011153.01.T01 MTR_7g061330 56.522 69 30 0 33 101 146 214 3.66e-19 89.7
MsG0280011153.01.T01 MTR_7g461410 56.522 69 30 0 33 101 146 214 3.66e-19 89.7
MsG0280011153.01.T01 MTR_3g101290 45.098 102 48 1 33 134 70 163 3.98e-19 85.9
MsG0280011153.01.T01 MTR_3g110028 48.235 85 43 1 33 117 118 201 4.45e-19 89.7
MsG0280011153.01.T01 MTR_7g451170 48.529 68 35 0 33 100 224 291 4.54e-19 88.6
MsG0280011153.01.T01 MTR_4g105660 50.000 68 34 0 33 100 213 280 4.66e-19 88.6
MsG0280011153.01.T01 MTR_7g061330 56.522 69 30 0 33 101 110 178 5.12e-19 89.0
MsG0280011153.01.T01 MTR_4g088015 50.746 67 33 0 33 99 254 320 5.26e-19 88.6
MsG0280011153.01.T01 MTR_7g037260 51.471 68 33 0 33 100 178 245 7.22e-19 87.4
MsG0280011153.01.T01 MTR_5g049190 48.529 68 35 0 33 100 52 119 1.71e-18 84.3
MsG0280011153.01.T01 MTR_5g082910 55.385 65 29 0 33 97 52 116 2.51e-18 84.7
MsG0280011153.01.T01 MTR_6g015455 55.882 68 30 0 33 100 38 105 3.59e-18 87.0
MsG0280011153.01.T01 MTR_1g026870 51.389 72 35 0 33 104 118 189 3.78e-18 87.0
MsG0280011153.01.T01 MTR_6g027340 53.846 65 29 1 28 91 43 107 6.95e-18 81.6
MsG0280011153.01.T01 MTR_6g074860 59.016 61 25 0 33 93 37 97 8.07e-18 82.4
MsG0280011153.01.T01 MTR_3g077650 48.529 68 35 0 33 100 214 281 9.67e-18 84.7
MsG0280011153.01.T01 MTR_5g088610 48.571 70 35 1 31 99 43 112 1.12e-17 84.0
MsG0280011153.01.T01 MTR_6g027360 53.846 65 29 1 28 91 105 169 1.19e-17 83.2
MsG0280011153.01.T01 MTR_4g082040 50.000 74 36 1 28 100 132 205 1.51e-17 84.0
MsG0280011153.01.T01 MTR_5g041570 48.649 74 37 1 28 100 161 234 2.06e-17 84.0
MsG0280011153.01.T01 MTR_7g450950 44.444 72 38 1 33 104 190 259 1.73e-16 80.1
MsG0280011153.01.T01 MTR_5g007300 69.767 43 13 0 31 73 98 140 2.52e-15 72.8
MsG0280011153.01.T01 MTR_7g037130 37.000 100 57 2 33 126 178 277 3.30e-15 76.6
MsG0280011153.01.T01 MTR_5g038910 49.231 65 33 0 36 100 62 126 3.69e-15 76.6
MsG0280011153.01.T01 MTR_5g038910 49.231 65 33 0 36 100 62 126 4.29e-15 77.0
MsG0280011153.01.T01 MTR_3g089045 50.000 74 36 1 28 100 43 116 4.76e-15 75.5
MsG0280011153.01.T01 MTR_6g027370 47.059 68 36 0 33 100 132 199 1.63e-14 74.3
MsG0280011153.01.T01 MTR_7g086960 52.459 61 29 0 33 93 122 182 2.38e-14 73.9
MsG0280011153.01.T01 MTR_1g085880 50.000 70 34 1 31 99 46 115 6.48e-14 70.1
MsG0280011153.01.T01 MTR_4g063100 56.522 46 20 0 55 100 1 46 8.94e-14 69.7
MsG0280011153.01.T01 MTR_1g085770 50.000 70 34 1 31 99 46 115 1.47e-13 71.2
MsG0280011153.01.T01 MTR_5g010650 46.032 63 34 0 33 95 143 205 2.26e-13 71.6
MsG0280011153.01.T01 MTR_8g468380 39.583 96 57 1 36 131 58 152 3.03e-13 71.2
MsG0280011153.01.T01 MTR_2g096380 39.241 79 42 2 55 129 1 77 3.46e-13 67.8
MsG0280011153.01.T01 MTR_7g061550 43.750 64 36 0 31 94 41 104 1.33e-12 68.9
MsG0280011153.01.T01 MTR_6g055910 58.696 46 19 0 55 100 2 47 1.44e-12 66.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280011153.01.T01 AT3G13890 58.896 163 53 5 31 182 46 205 6.56e-45 159
MsG0280011153.01.T01 AT3G13890 58.896 163 53 5 31 182 55 214 8.22e-45 158
MsG0280011153.01.T01 AT3G12720 77.500 80 18 0 31 110 56 135 2.68e-39 142
MsG0280011153.01.T01 AT5G12870 72.414 87 22 1 17 101 36 122 2.58e-38 139
MsG0280011153.01.T01 AT1G09540 58.197 122 39 3 6 120 25 141 6.89e-38 140
MsG0280011153.01.T01 AT5G26660 75.000 80 20 0 31 110 15 94 1.43e-37 138
MsG0280011153.01.T01 AT1G57560 63.830 94 34 0 31 124 46 139 4.38e-37 137
MsG0280011153.01.T01 AT3G08500 72.414 87 22 1 17 101 48 134 8.27e-37 137
MsG0280011153.01.T01 AT5G26660 75.000 80 20 0 31 110 46 125 8.79e-37 137
MsG0280011153.01.T01 AT1G57560 71.250 80 23 0 31 110 46 125 1.31e-36 134
MsG0280011153.01.T01 AT4G01680 67.816 87 28 0 31 117 46 132 2.04e-36 133
MsG0280011153.01.T01 AT4G01680 67.816 87 28 0 31 117 46 132 1.08e-35 133
MsG0280011153.01.T01 AT1G63910 64.835 91 27 1 11 101 31 116 1.35e-35 134
MsG0280011153.01.T01 AT4G01680 67.816 87 28 0 31 117 58 144 1.55e-35 133
MsG0280011153.01.T01 AT4G09460 51.200 125 53 2 10 134 30 146 1.87e-35 130
MsG0280011153.01.T01 AT5G54230 63.736 91 26 1 31 121 46 129 8.38e-35 130
MsG0280011153.01.T01 AT1G22640 57.692 104 33 2 10 110 30 125 9.88e-35 129
MsG0280011153.01.T01 AT1G35515 53.211 109 45 2 27 130 42 149 6.09e-34 125
MsG0280011153.01.T01 AT2G16720 50.000 128 57 2 31 151 46 173 6.20e-34 127
MsG0280011153.01.T01 AT4G34990 64.286 84 30 0 27 110 42 125 2.71e-33 125
MsG0280011153.01.T01 AT5G65230 65.000 80 28 0 31 110 46 125 2.74e-33 126
MsG0280011153.01.T01 AT5G10280 62.069 87 33 0 31 117 46 132 2.91e-33 127
MsG0280011153.01.T01 AT4G38620 66.250 80 27 0 31 110 46 125 3.03e-33 125
MsG0280011153.01.T01 AT4G12350 53.571 112 48 1 31 138 46 157 5.78e-33 125
MsG0280011153.01.T01 AT4G21440 61.538 91 28 1 31 121 46 129 7.54e-33 126
MsG0280011153.01.T01 AT3G61250 67.949 78 25 0 31 108 46 123 1.10e-32 124
MsG0280011153.01.T01 AT3G27810 61.250 80 31 0 31 110 5 84 1.23e-32 121
MsG0280011153.01.T01 AT3G27810 59.524 84 34 0 27 110 50 133 2.23e-32 122
MsG0280011153.01.T01 AT4G05100 59.341 91 30 1 31 121 47 130 2.25e-32 124
MsG0280011153.01.T01 AT1G06180 52.066 121 48 2 31 141 46 166 2.26e-32 122
MsG0280011153.01.T01 AT5G15310 50.877 114 49 1 31 144 46 152 2.53e-32 122
MsG0280011153.01.T01 AT5G15310 50.877 114 49 1 31 144 46 152 3.99e-32 124
MsG0280011153.01.T01 AT5G15310 50.877 114 49 1 31 144 46 152 4.58e-32 123
MsG0280011153.01.T01 AT3G02940 62.500 80 30 0 31 110 46 125 8.13e-32 122
MsG0280011153.01.T01 AT3G01140 63.750 80 29 0 31 110 46 125 9.26e-32 123
MsG0280011153.01.T01 AT5G16770 50.893 112 54 1 31 142 46 156 1.33e-31 122
MsG0280011153.01.T01 AT5G16770 50.893 112 54 1 31 142 46 156 1.33e-31 122
MsG0280011153.01.T01 AT3G02940 62.500 80 30 0 31 110 46 125 1.35e-31 122
MsG0280011153.01.T01 AT3G02940 62.500 80 30 0 31 110 46 125 1.35e-31 122
MsG0280011153.01.T01 AT4G17785 61.250 80 31 0 31 110 47 126 1.57e-31 122
MsG0280011153.01.T01 AT3G01140 63.750 80 29 0 31 110 89 168 2.12e-31 123
MsG0280011153.01.T01 AT4G17785 61.250 80 31 0 31 110 47 126 2.14e-31 122
MsG0280011153.01.T01 AT5G16770 50.893 112 54 1 31 142 46 156 2.74e-31 121
MsG0280011153.01.T01 AT5G16770 50.893 112 54 1 31 142 46 156 2.74e-31 121
MsG0280011153.01.T01 AT1G34670 50.000 114 53 1 31 144 46 155 3.00e-31 122
MsG0280011153.01.T01 AT2G47460 66.234 77 24 1 31 107 46 120 3.07e-31 122
MsG0280011153.01.T01 AT1G74430 62.500 80 30 0 31 110 46 125 4.18e-31 119
MsG0280011153.01.T01 AT5G40350 63.889 72 26 0 31 102 6 77 4.37e-31 116
MsG0280011153.01.T01 AT5G62320 60.714 84 33 0 31 114 54 137 4.38e-31 119
MsG0280011153.01.T01 AT5G40350 61.842 76 29 0 27 102 47 122 5.66e-31 117
MsG0280011153.01.T01 AT5G60890 67.606 71 23 0 31 101 46 116 8.65e-31 119
MsG0280011153.01.T01 AT5G52600 62.222 90 32 1 13 100 26 115 9.65e-31 116
MsG0280011153.01.T01 AT5G56110 61.176 85 33 0 31 115 46 130 1.00e-30 120
MsG0280011153.01.T01 AT5G14750 65.333 75 26 0 31 105 50 124 1.30e-30 116
MsG0280011153.01.T01 AT3G01530 64.789 71 25 0 31 101 59 129 1.85e-30 116
MsG0280011153.01.T01 AT3G27920 48.276 116 51 2 5 120 30 136 1.90e-30 116
MsG0280011153.01.T01 AT2G31180 70.423 71 21 0 31 101 46 116 2.29e-30 117
MsG0280011153.01.T01 AT5G14750 65.753 73 25 0 33 105 18 90 3.18e-30 114
MsG0280011153.01.T01 AT4G28110 56.044 91 33 1 31 121 46 129 4.24e-30 117
MsG0280011153.01.T01 AT4G22680 65.000 80 28 0 31 110 46 125 4.50e-30 117
MsG0280011153.01.T01 AT5G14340 60.920 87 34 0 31 117 58 144 4.85e-30 117
MsG0280011153.01.T01 AT1G66230 65.000 80 28 0 31 110 46 125 5.94e-30 117
MsG0280011153.01.T01 AT5G16600 54.630 108 47 1 31 136 46 153 1.02e-29 117
MsG0280011153.01.T01 AT3G11440 65.714 70 24 0 31 100 75 144 1.09e-29 119
MsG0280011153.01.T01 AT5G40330 55.435 92 36 1 10 101 30 116 1.58e-29 114
MsG0280011153.01.T01 AT1G18570 60.000 80 32 0 31 110 47 126 1.67e-29 117
MsG0280011153.01.T01 AT1G18710 58.750 80 33 0 31 110 46 125 1.93e-29 115
MsG0280011153.01.T01 AT3G11440 65.714 70 24 0 31 100 75 144 2.45e-29 119
MsG0280011153.01.T01 AT3G11440 65.714 70 24 0 31 100 75 144 2.45e-29 119
MsG0280011153.01.T01 AT3G11440 65.714 70 24 0 31 100 75 144 2.45e-29 119
MsG0280011153.01.T01 AT5G61420 55.952 84 37 0 27 110 42 125 2.56e-29 117
MsG0280011153.01.T01 AT5G07700 60.000 80 32 0 31 110 46 125 3.00e-29 116
MsG0280011153.01.T01 AT5G07700 60.000 80 32 0 31 110 46 125 3.00e-29 116
MsG0280011153.01.T01 AT5G06100 67.143 70 23 0 31 100 66 135 3.05e-29 118
MsG0280011153.01.T01 AT3G23250 62.025 79 28 1 31 109 46 122 3.71e-29 114
MsG0280011153.01.T01 AT2G26960 65.217 69 24 0 31 99 54 122 4.09e-29 117
MsG0280011153.01.T01 AT3G13540 60.256 78 31 0 31 108 57 134 5.05e-29 113
MsG0280011153.01.T01 AT5G06100 67.143 70 23 0 31 100 66 135 5.98e-29 118
MsG0280011153.01.T01 AT5G06100 67.143 70 23 0 31 100 66 135 5.98e-29 118
MsG0280011153.01.T01 AT5G06100 67.143 70 23 0 31 100 66 135 5.98e-29 118
MsG0280011153.01.T01 AT5G06100 67.143 70 23 0 31 100 66 135 5.98e-29 118
MsG0280011153.01.T01 AT3G62610 60.759 79 31 0 31 109 46 124 6.36e-29 115
MsG0280011153.01.T01 AT5G49330 61.538 78 30 0 31 108 46 123 6.71e-29 115
MsG0280011153.01.T01 AT5G07690 57.143 84 36 0 27 110 42 125 6.83e-29 115
MsG0280011153.01.T01 AT5G52260 50.833 120 43 4 31 136 46 163 7.48e-29 113
MsG0280011153.01.T01 AT4G26930 65.217 69 24 0 31 99 53 121 7.84e-29 116
MsG0280011153.01.T01 AT1G25340 59.459 74 30 0 27 100 48 121 8.38e-29 114
MsG0280011153.01.T01 AT1G16490 64.865 74 26 0 31 104 48 121 8.86e-29 113
MsG0280011153.01.T01 AT5G35550 67.606 71 23 0 31 101 51 121 9.46e-29 113
MsG0280011153.01.T01 AT1G56160 67.606 71 23 0 31 101 48 118 1.50e-28 113
MsG0280011153.01.T01 AT5G35550 67.606 71 23 0 31 101 48 118 1.54e-28 112
MsG0280011153.01.T01 AT1G68320 61.429 70 27 0 31 100 53 122 1.87e-28 112
MsG0280011153.01.T01 AT3G30210 57.647 85 33 1 31 112 61 145 2.62e-28 112
MsG0280011153.01.T01 AT2G32460 53.846 91 37 1 10 100 36 121 2.77e-28 115
MsG0280011153.01.T01 AT2G32460 53.846 91 37 1 10 100 24 109 3.31e-28 115
MsG0280011153.01.T01 AT1G48000 60.494 81 30 1 27 105 62 142 3.42e-28 111
MsG0280011153.01.T01 AT1G79180 64.000 75 27 0 27 101 77 151 5.00e-28 112
MsG0280011153.01.T01 AT5G59780 56.098 82 36 0 19 100 9 90 5.25e-28 109
MsG0280011153.01.T01 AT3G12820 62.500 72 27 0 33 104 2 73 8.58e-28 108
MsG0280011153.01.T01 AT1G79180 66.197 71 24 0 31 101 48 118 9.31e-28 111
MsG0280011153.01.T01 AT3G46130 56.098 82 36 0 19 100 9 90 1.08e-27 109
MsG0280011153.01.T01 AT3G46130 62.857 70 26 0 31 100 11 80 1.13e-27 109
MsG0280011153.01.T01 AT4G13480 65.714 70 24 0 31 100 40 109 1.13e-27 110
MsG0280011153.01.T01 AT3G12820 62.162 74 28 0 31 104 48 121 1.51e-27 109
MsG0280011153.01.T01 AT3G24310 64.384 73 26 0 31 103 52 124 1.53e-27 110
MsG0280011153.01.T01 AT5G59780 51.546 97 37 2 4 100 25 111 1.60e-27 108
MsG0280011153.01.T01 AT1G08810 61.333 75 29 0 31 105 46 120 1.65e-27 110
MsG0280011153.01.T01 AT4G37780 60.274 73 29 0 31 103 47 119 1.67e-27 110
MsG0280011153.01.T01 AT3G46130 51.546 97 37 2 4 100 26 112 2.10e-27 109
MsG0280011153.01.T01 AT3G48920 63.768 69 25 0 31 99 52 120 2.22e-27 109
MsG0280011153.01.T01 AT5G55020 64.789 71 25 0 31 101 60 130 2.25e-27 113
MsG0280011153.01.T01 AT5G23000 61.111 72 28 0 31 102 47 118 2.34e-27 110
MsG0280011153.01.T01 AT4G25560 66.667 72 24 0 31 102 44 115 3.13e-27 109
MsG0280011153.01.T01 AT5G57620 59.459 74 30 0 31 104 47 120 3.22e-27 110
MsG0280011153.01.T01 AT3G28470 56.731 104 38 1 31 127 46 149 4.21e-27 110
MsG0280011153.01.T01 AT2G47190 37.410 139 84 2 27 165 50 185 5.58e-27 108
MsG0280011153.01.T01 AT1G74080 56.977 86 37 0 31 116 46 131 6.19e-27 109
MsG0280011153.01.T01 AT1G25340 62.121 66 25 0 35 100 51 116 7.26e-27 108
MsG0280011153.01.T01 AT5G65790 61.111 72 28 0 31 102 47 118 9.20e-27 110
MsG0280011153.01.T01 AT3G49690 59.722 72 29 0 31 102 47 118 9.57e-27 108
MsG0280011153.01.T01 AT1G25340 62.121 66 25 0 35 100 51 116 1.25e-26 108
MsG0280011153.01.T01 AT1G74650 60.526 76 30 0 31 106 46 121 1.38e-26 108
MsG0280011153.01.T01 AT3G47600 61.972 71 27 0 31 101 40 110 1.42e-26 108
MsG0280011153.01.T01 AT3G47600 61.972 71 27 0 31 101 46 116 2.16e-26 108
MsG0280011153.01.T01 AT5G62470 61.972 71 27 0 31 101 46 116 5.04e-26 107
MsG0280011153.01.T01 AT3G28910 61.972 71 27 0 31 101 46 116 9.09e-26 106
MsG0280011153.01.T01 AT3G53200 53.947 76 35 0 31 106 10 85 2.01e-25 102
MsG0280011153.01.T01 AT3G53200 46.602 103 45 2 4 106 26 118 2.50e-25 103
MsG0280011153.01.T01 AT5G62470 62.319 69 26 0 33 101 47 115 2.87e-25 105
MsG0280011153.01.T01 AT2G36890 56.164 73 32 0 31 103 47 119 4.00e-25 103
MsG0280011153.01.T01 AT2G36890 56.164 73 32 0 31 103 88 160 6.89e-25 104
MsG0280011153.01.T01 AT1G22640 63.235 68 25 0 43 110 1 68 9.26e-25 100
MsG0280011153.01.T01 AT1G66370 58.571 70 29 0 31 100 42 111 7.38e-24 99.4
MsG0280011153.01.T01 AT3G60460 62.857 70 25 1 31 99 45 114 4.44e-23 98.6
MsG0280011153.01.T01 AT3G06490 62.319 69 26 0 31 99 53 121 1.59e-22 97.4
MsG0280011153.01.T01 AT5G49620 62.319 69 26 0 31 99 60 128 1.63e-22 97.1
MsG0280011153.01.T01 AT1G66380 61.429 70 27 0 31 100 9 78 1.51e-21 89.0
MsG0280011153.01.T01 AT5G14750 62.712 59 22 0 43 101 1 59 4.76e-21 89.0
MsG0280011153.01.T01 AT5G14750 62.712 59 22 0 43 101 1 59 4.76e-21 89.0
MsG0280011153.01.T01 AT2G26950 55.932 59 26 0 37 95 56 114 5.96e-21 93.6
MsG0280011153.01.T01 AT5G40360 44.037 109 52 4 33 139 191 292 6.40e-21 93.2
MsG0280011153.01.T01 AT1G69560 35.065 154 73 6 28 170 134 271 1.72e-20 91.7
MsG0280011153.01.T01 AT1G69560 35.065 154 73 6 28 170 150 287 2.18e-20 91.7
MsG0280011153.01.T01 AT1G66380 61.429 70 27 0 31 100 42 111 2.50e-20 86.7
MsG0280011153.01.T01 AT1G71030 52.703 74 35 0 36 109 5 78 2.67e-20 87.8
MsG0280011153.01.T01 AT3G23250 56.716 67 27 1 43 109 1 65 3.05e-20 89.0
MsG0280011153.01.T01 AT1G71030 52.703 74 35 0 36 109 19 92 3.57e-20 87.8
MsG0280011153.01.T01 AT5G11050 51.351 74 35 1 28 100 132 205 5.71e-20 91.3
MsG0280011153.01.T01 AT1G56650 47.525 101 43 2 31 121 42 142 7.41e-20 88.2
MsG0280011153.01.T01 AT3G09230 56.757 74 30 1 33 106 88 159 1.18e-19 90.1
MsG0280011153.01.T01 AT4G18770 50.725 69 34 0 33 101 250 318 1.60e-19 90.1
MsG0280011153.01.T01 AT2G39880 57.353 68 29 0 33 100 83 150 2.43e-19 89.0
MsG0280011153.01.T01 AT5G58850 48.649 74 37 1 28 100 132 205 2.92e-19 89.4
MsG0280011153.01.T01 AT3G55730 58.824 68 28 0 33 100 89 156 3.07e-19 89.0
MsG0280011153.01.T01 AT3G50060 45.000 100 55 0 33 132 39 138 4.17e-19 87.4
MsG0280011153.01.T01 AT5G49620 51.807 83 26 1 31 99 60 142 4.54e-19 87.4
MsG0280011153.01.T01 AT1G66390 60.000 70 28 0 31 100 42 111 4.90e-19 86.3
MsG0280011153.01.T01 AT3G27785 36.283 113 61 2 33 141 222 327 4.94e-19 88.6
MsG0280011153.01.T01 AT2G25230 46.269 67 36 0 33 99 59 125 2.07e-18 84.0
MsG0280011153.01.T01 AT1G26780 47.436 78 40 1 28 104 125 202 3.70e-18 84.3
MsG0280011153.01.T01 AT5G11510 51.389 72 35 0 33 104 114 185 4.07e-18 87.0
MsG0280011153.01.T01 AT5G11510 51.389 72 35 0 33 104 114 185 4.07e-18 87.0
MsG0280011153.01.T01 AT5G11510 51.389 72 35 0 33 104 114 185 4.07e-18 87.0
MsG0280011153.01.T01 AT1G26780 47.436 78 40 1 28 104 125 202 4.59e-18 85.1
MsG0280011153.01.T01 AT5G11510 51.389 72 35 0 33 104 114 185 4.76e-18 86.7
MsG0280011153.01.T01 AT5G11510 51.389 72 35 0 33 104 114 185 4.94e-18 86.7
MsG0280011153.01.T01 AT1G18960 50.704 71 33 1 31 101 41 109 5.04e-18 84.3
MsG0280011153.01.T01 AT5G02320 52.174 69 33 0 33 101 160 228 6.04e-18 85.9
MsG0280011153.01.T01 AT5G02320 52.174 69 33 0 33 101 160 228 6.04e-18 85.9
MsG0280011153.01.T01 AT5G02320 52.174 69 33 0 33 101 100 168 6.22e-18 85.5
MsG0280011153.01.T01 AT5G67300 52.055 73 35 0 33 105 39 111 1.00e-17 83.6
MsG0280011153.01.T01 AT4G32730 50.000 72 36 0 33 104 120 191 1.04e-17 85.5
MsG0280011153.01.T01 AT4G32730 50.000 72 36 0 33 104 120 191 1.16e-17 85.5
MsG0280011153.01.T01 AT4G32730 50.000 72 36 0 33 104 120 191 1.16e-17 85.5
MsG0280011153.01.T01 AT4G32730 50.000 72 36 0 33 104 120 191 1.16e-17 85.5
MsG0280011153.01.T01 AT4G32730 50.000 72 36 0 33 104 120 191 1.16e-17 85.5
MsG0280011153.01.T01 AT3G09370 52.941 68 32 0 33 100 163 230 1.59e-17 84.3
MsG0280011153.01.T01 AT3G09370 52.941 68 32 0 33 100 168 235 1.71e-17 84.3
MsG0280011153.01.T01 AT4G37260 52.941 68 32 0 33 100 46 113 1.91e-17 82.8
MsG0280011153.01.T01 AT3G09370 52.941 68 32 0 33 100 176 243 2.34e-17 84.0
MsG0280011153.01.T01 AT2G23290 52.941 68 32 0 33 100 46 113 6.28e-17 81.3
MsG0280011153.01.T01 AT4G33450 45.122 82 44 1 33 114 52 132 6.94e-16 77.0
MsG0280011153.01.T01 AT1G17950 44.578 83 36 1 33 105 38 120 1.10e-15 76.6
MsG0280011153.01.T01 AT2G02820 49.231 65 33 0 36 100 66 130 2.42e-15 76.6
MsG0280011153.01.T01 AT3G29020 45.333 75 40 1 28 101 94 168 2.48e-15 76.3
MsG0280011153.01.T01 AT2G02820 47.059 68 36 0 33 100 63 130 2.59e-15 77.4
MsG0280011153.01.T01 AT3G29020 46.377 69 37 0 33 101 98 166 3.10e-15 75.1
MsG0280011153.01.T01 AT2G02820 47.059 68 36 0 33 100 63 130 3.36e-15 77.4
MsG0280011153.01.T01 AT1G14350 49.231 65 33 0 36 100 61 125 3.87e-15 77.0
MsG0280011153.01.T01 AT1G14350 49.231 65 33 0 36 100 61 125 3.87e-15 77.0
MsG0280011153.01.T01 AT5G40430 43.284 67 38 0 33 99 86 152 5.75e-15 74.7
MsG0280011153.01.T01 AT5G17800 49.206 63 32 0 31 93 124 186 1.20e-14 74.7
MsG0280011153.01.T01 AT4G00540 46.377 69 37 0 33 101 139 207 1.31e-14 75.1
MsG0280011153.01.T01 AT1G73410 48.529 68 35 0 33 100 39 106 1.80e-14 72.8
MsG0280011153.01.T01 AT4G00540 46.377 69 37 0 33 101 137 205 2.08e-14 74.7
MsG0280011153.01.T01 AT1G73410 48.529 68 35 0 33 100 39 106 3.04e-14 71.6
MsG0280011153.01.T01 AT5G59780 56.522 46 20 0 55 100 1 46 1.12e-13 68.9
MsG0280011153.01.T01 AT3G46130 56.522 46 20 0 55 100 1 46 1.61e-13 68.9
MsG0280011153.01.T01 AT1G14350 50.000 60 30 0 41 100 23 82 3.33e-13 70.9
MsG0280011153.01.T01 AT1G14350 50.000 60 30 0 41 100 23 82 3.33e-13 70.9
MsG0280011153.01.T01 AT4G25560 59.574 47 19 0 56 102 3 49 6.47e-13 67.8
MsG0280011153.01.T01 AT2G37630 43.750 64 36 0 31 94 38 101 6.14e-12 67.0
MsG0280011153.01.T01 AT1G74650 57.778 45 19 0 62 106 1 45 3.25e-11 63.5

Find 65 sgRNAs with CRISPR-Local

Find 123 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GATCAACAATATTATAATTT+TGG 0.069262 2:+80252698 None:intergenic
TTTGATGATGGTACTGTTTC+AGG 0.136664 2:+80252823 None:intergenic
ATTGAACTTCATACTATTCT+AGG 0.151488 2:-80253338 MsG0280011153.01.T01:CDS
ACAAACATAATTATCCTTAA+TGG 0.189462 2:+80252567 None:intergenic
ATTCAGAACATGTAGGAAAT+TGG 0.194258 2:+80252858 None:intergenic
CTTTCAACAGAAGCATTTCT+AGG 0.208632 2:+80253042 None:intergenic
TATAACACCGATCAGTAATT+TGG 0.248867 2:+80252476 None:intergenic
GAAGAAGCAGAAGAAGAAAA+TGG 0.258234 2:+80252538 None:intergenic
GGTACTGTTTCAGGCAATAT+TGG 0.259860 2:+80252832 None:intergenic
TCCACTTGATGATCATTCTT+TGG 0.286980 2:+80252391 None:intergenic
TGCTGCTGCTGCCATGTATT+TGG 0.294783 2:+80252658 None:intergenic
CTTTGAAAGTGAAACCATTA+AGG 0.297586 2:-80252581 MsG0280011153.01.T01:CDS
ATAATGAGGTGAAGAACTTT+TGG 0.303241 2:-80253143 MsG0280011153.01.T01:CDS
ACAACTTGATGATCTTGTTT+TGG 0.311200 2:+80252421 None:intergenic
ACCTCATTATCTGTTCTTCC+TGG 0.311501 2:+80253156 None:intergenic
TTTGATGATCAATACCTTGT+AGG 0.315080 2:+80252917 None:intergenic
TTGGGTTGCAACATCACTTT+TGG 0.326944 2:+80252717 None:intergenic
ATAGGATTGTCATTAAATAA+AGG 0.329117 2:+80253012 None:intergenic
AAACTTCCACGTTTCAAATC+AGG 0.335974 2:+80253386 None:intergenic
TTCAGAACATGTAGGAAATT+GGG 0.367585 2:+80252859 None:intergenic
GATATTGATGATTGGAGTTA+AGG 0.394816 2:+80252989 None:intergenic
GATTGGAGTTGGGATATTGA+TGG 0.413697 2:+80252939 None:intergenic
TAGGATTGTCATTAAATAAA+GGG 0.418843 2:+80253013 None:intergenic
ATGGCCAATGTGTATCTGTT+AGG 0.432969 2:-80254017 MsG0280011153.01.T01:CDS
TTCATACTATTCTAGGCAAC+AGG 0.438465 2:-80253331 MsG0280011153.01.T01:intron
GGATATTGATGGGAAGGTAT+AGG 0.442246 2:+80252950 None:intergenic
GAAGATGTTGTTGTTGAAGA+TGG 0.452097 2:+80252334 None:intergenic
TGATCAATACCTTGTAGGAT+TGG 0.473649 2:+80252922 None:intergenic
TCACTCTCAGATTGATCAGA+TGG 0.481317 2:+80253948 None:intergenic
AGAAAATGTGGCTAAAGAAG+TGG 0.482058 2:+80253077 None:intergenic
ATTGGAGTTGGGATATTGAT+GGG 0.491224 2:+80252940 None:intergenic
TACCTTGTAGGATTGGAGTT+GGG 0.502222 2:+80252929 None:intergenic
ATACCTTGTAGGATTGGAGT+TGG 0.505314 2:+80252928 None:intergenic
TGATGATTGGAGTTAAGGAT+AGG 0.512802 2:+80252994 None:intergenic
ATTTCCAATTAAGGAAGGAT+AGG 0.515169 2:+80252268 None:intergenic
CTTCTTATGAATTAGATACA+TGG 0.518233 2:-80252792 MsG0280011153.01.T01:CDS
TTATCAATATGCCAAATACA+TGG 0.519541 2:-80252669 MsG0280011153.01.T01:CDS
GAGTTGGGATATTGATGGGA+AGG 0.522153 2:+80252944 None:intergenic
AAGAAGCAGAAGAAGAAAAT+GGG 0.524197 2:+80252539 None:intergenic
TTGGATTATTCAGAACATGT+AGG 0.534460 2:+80252851 None:intergenic
GAAGATGGAATATTTGATGA+TGG 0.541879 2:+80252811 None:intergenic
AAAGTGATGATATTGATGAT+TGG 0.543382 2:+80252981 None:intergenic
AACAGATACACATTGGCCAT+TGG 0.545988 2:+80254020 None:intergenic
CAGATAGCAAAGCATTTACC+AGG 0.550164 2:-80253174 MsG0280011153.01.T01:CDS
GTATCTAATTCATAAGAAGA+TGG 0.550316 2:+80252796 None:intergenic
TGTCATGCATGCAGACTTGT+GGG 0.551671 2:+80253986 None:intergenic
TATAATACAGATCATTATCA+AGG 0.551714 2:-80252457 MsG0280011153.01.T01:CDS
ATAATGAGAGCAGCTTCTTG+TGG 0.553720 2:+80253359 None:intergenic
GCATGCATGACACGTGTACA+AGG 0.571961 2:-80253975 MsG0280011153.01.T01:CDS
GAAAATGTGGCTAAAGAAGT+GGG 0.573728 2:+80253078 None:intergenic
ACTGGTTGATAGAATGATAG+TGG 0.574540 2:+80252304 None:intergenic
GAAATTGGGATTATAACTGT+TGG 0.577220 2:+80252873 None:intergenic
TATTGATGGGAAGGTATAGG+TGG 0.579830 2:+80252953 None:intergenic
ATCCCAACTCCAATCCTACA+AGG 0.580405 2:-80252931 MsG0280011153.01.T01:CDS
CACTCTCAGATTGATCAGAT+GGG 0.580480 2:+80253949 None:intergenic
ATGTGTATCTGTTAGGACAT+AGG 0.583263 2:-80254010 MsG0280011153.01.T01:CDS
TCATGATTTCCAATTAAGGA+AGG 0.584972 2:+80252263 None:intergenic
GTGTCATGCATGCAGACTTG+TGG 0.588350 2:+80253985 None:intergenic
ACAGTGAATATCAGAAAATG+TGG 0.592062 2:+80253065 None:intergenic
ACCAGGAAGAACAGATAATG+AGG 0.592167 2:-80253157 MsG0280011153.01.T01:CDS
CTTGCAGGACTGCAGAGATG+TGG 0.599628 2:-80253446 MsG0280011153.01.T01:intron
GTATCAACCAAATTACTGAT+CGG 0.613070 2:-80252483 MsG0280011153.01.T01:CDS
TTAAGACCTGATTTGAAACG+TGG 0.631002 2:-80253392 MsG0280011153.01.T01:CDS
ACCAAAGAATGATCATCAAG+TGG 0.657833 2:-80252392 MsG0280011153.01.T01:CDS
ATGTCCTAACAGATACACAT+TGG 0.705094 2:+80254013 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATCAACAATATTATAATTTT+GGG + Chr2:80253597-80253616 None:intergenic 10.0%
!! ATATAAAAATGAGAATAGAA+TGG + Chr2:80252569-80252588 None:intergenic 15.0%
!! TAATAGAAAGATGAAATTAA+AGG + Chr2:80252634-80252653 None:intergenic 15.0%
!!! AAAAAAAAAAAGGTTGATAA+TGG + Chr2:80252523-80252542 None:intergenic 15.0%
!!! GATCAACAATATTATAATTT+TGG + Chr2:80253598-80253617 None:intergenic 15.0%
!! AAAAGAAAAAGATCCATTAT+AGG - Chr2:80252380-80252399 MsG0280011153.01.T01:CDS 20.0%
!! AAAGAAAAAGATCCATTATA+GGG - Chr2:80252381-80252400 MsG0280011153.01.T01:CDS 20.0%
!! ACAAACATAATTATCCTTAA+TGG + Chr2:80253729-80253748 None:intergenic 20.0%
!! ACTGAACAGAAAAAAAAAAA+AGG + Chr2:80252533-80252552 None:intergenic 20.0%
!! ATAGGATTGTCATTAAATAA+AGG + Chr2:80253284-80253303 None:intergenic 20.0%
!! TAGGATTGTCATTAAATAAA+GGG + Chr2:80253283-80253302 None:intergenic 20.0%
!! TATAATACAGATCATTATCA+AGG - Chr2:80253836-80253855 MsG0280011153.01.T01:intron 20.0%
!! TGAAAATAAAGATGAATTAG+AGG + Chr2:80253001-80253020 None:intergenic 20.0%
!! TGTTAATTAGTAAAACCTTA+TGG + Chr2:80253066-80253085 None:intergenic 20.0%
!! TTAGATATTAATCAACCATA+AGG - Chr2:80253048-80253067 MsG0280011153.01.T01:CDS 20.0%
!!! ATTAACAAGAAAGTATGATT+TGG - Chr2:80253079-80253098 MsG0280011153.01.T01:CDS 20.0%
!!! TGATGATTTTCTTGAATATT+TGG + Chr2:80253548-80253567 None:intergenic 20.0%
! ATATAACCATTTGTAACCTA+GGG - Chr2:80252585-80252604 MsG0280011153.01.T01:CDS 25.0%
! ATCAACTACATCACTAATTA+TGG - Chr2:80252796-80252815 MsG0280011153.01.T01:CDS 25.0%
! ATTGAACTTCATACTATTCT+AGG - Chr2:80252955-80252974 MsG0280011153.01.T01:CDS 25.0%
! CTTCTTATGAATTAGATACA+TGG - Chr2:80253501-80253520 MsG0280011153.01.T01:intron 25.0%
! GTATCTAATTCATAAGAAGA+TGG + Chr2:80253500-80253519 None:intergenic 25.0%
! TATATAACCATTTGTAACCT+AGG - Chr2:80252584-80252603 MsG0280011153.01.T01:CDS 25.0%
! TTATCAATATGCCAAATACA+TGG - Chr2:80253624-80253643 MsG0280011153.01.T01:intron 25.0%
!! AAAGATGAAATTAAAGGTGT+AGG + Chr2:80252628-80252647 None:intergenic 25.0%
!! AAAGTGATGATATTGATGAT+TGG + Chr2:80253315-80253334 None:intergenic 25.0%
!! AAGAAAGTATGATTTGGATT+TGG - Chr2:80253085-80253104 MsG0280011153.01.T01:CDS 25.0%
!!! AAAGGTTGATAATGGAATTA+TGG + Chr2:80252515-80252534 None:intergenic 25.0%
AAGAAGCAGAAGAAGAAAAT+GGG + Chr2:80253757-80253776 None:intergenic 30.0%
ACAGTGAATATCAGAAAATG+TGG + Chr2:80253231-80253250 None:intergenic 30.0%
AGAAGTGGTGAATTTAATGT+GGG + Chr2:80252485-80252504 None:intergenic 30.0%
ATTCAGAACATGTAGGAAAT+TGG + Chr2:80253438-80253457 None:intergenic 30.0%
GAAATTGGGATTATAACTGT+TGG + Chr2:80253423-80253442 None:intergenic 30.0%
GAAGATGGAATATTTGATGA+TGG + Chr2:80253485-80253504 None:intergenic 30.0%
GTATCAACCAAATTACTGAT+CGG - Chr2:80253810-80253829 MsG0280011153.01.T01:intron 30.0%
TACATCACTAATTATGGACA+TGG - Chr2:80252802-80252821 MsG0280011153.01.T01:CDS 30.0%
TATAACACCGATCAGTAATT+TGG + Chr2:80253820-80253839 None:intergenic 30.0%
TTCAGAACATGTAGGAAATT+GGG + Chr2:80253437-80253456 None:intergenic 30.0%
TTGGATTATTCAGAACATGT+AGG + Chr2:80253445-80253464 None:intergenic 30.0%
! AAAGGTGTAGGTTGTATTAT+AGG + Chr2:80252616-80252635 None:intergenic 30.0%
! AGTGAGAAGTACACAATAAT+GGG - Chr2:80252703-80252722 MsG0280011153.01.T01:CDS 30.0%
! ATAATGAGGTGAAGAACTTT+TGG - Chr2:80253150-80253169 MsG0280011153.01.T01:CDS 30.0%
! ATGAGTTTTTCATCTTCTTC+TGG + Chr2:80252778-80252797 None:intergenic 30.0%
! CAAAGACTTTTTGCACAATA+GGG + Chr2:80253697-80253716 None:intergenic 30.0%
! CTTTGAAAGTGAAACCATTA+AGG - Chr2:80253712-80253731 MsG0280011153.01.T01:intron 30.0%
! GATATTGATGATTGGAGTTA+AGG + Chr2:80253307-80253326 None:intergenic 30.0%
! TCAAAGACTTTTTGCACAAT+AGG + Chr2:80253698-80253717 None:intergenic 30.0%
! TTTGATGATCAATACCTTGT+AGG + Chr2:80253379-80253398 None:intergenic 30.0%
!! ACAACTTGATGATCTTGTTT+TGG + Chr2:80253875-80253894 None:intergenic 30.0%
AAACTTCCACGTTTCAAATC+AGG + Chr2:80252910-80252929 None:intergenic 35.0%
AACATTTGTAGGCCCTATAA+TGG + Chr2:80252396-80252415 None:intergenic 35.0%
AATAACAGAAGGTGAAAGAG+AGG - Chr2:80252742-80252761 MsG0280011153.01.T01:CDS 35.0%
AATTATGGTGAAGTGAGAAG+TGG + Chr2:80252500-80252519 None:intergenic 35.0%
ACCAAAGAATGATCATCAAG+TGG - Chr2:80253901-80253920 MsG0280011153.01.T01:intron 35.0%
AGAAAATGTGGCTAAAGAAG+TGG + Chr2:80253219-80253238 None:intergenic 35.0%
ATGTCCTAACAGATACACAT+TGG + Chr2:80252283-80252302 None:intergenic 35.0%
ATGTGTATCTGTTAGGACAT+AGG - Chr2:80252283-80252302 MsG0280011153.01.T01:CDS 35.0%
ATTGGAGTTGGGATATTGAT+GGG + Chr2:80253356-80253375 None:intergenic 35.0%
CTAATTATGGACATGGTTGT+TGG - Chr2:80252809-80252828 MsG0280011153.01.T01:CDS 35.0%
CTCACTCTCTTTGAATATCA+AGG + Chr2:80252689-80252708 None:intergenic 35.0%
GAAAAAGTTGCAGATTGAGA+TGG - Chr2:80252869-80252888 MsG0280011153.01.T01:CDS 35.0%
GAAAATGTGGCTAAAGAAGT+GGG + Chr2:80253218-80253237 None:intergenic 35.0%
GAAGAAGCAGAAGAAGAAAA+TGG + Chr2:80253758-80253777 None:intergenic 35.0%
GAGAAGTGGTGAATTTAATG+TGG + Chr2:80252486-80252505 None:intergenic 35.0%
GATCATCATCATCATCATGA+TGG - Chr2:80253788-80253807 MsG0280011153.01.T01:intron 35.0%
TGATCAATACCTTGTAGGAT+TGG + Chr2:80253374-80253393 None:intergenic 35.0%
TGATGATTGGAGTTAAGGAT+AGG + Chr2:80253302-80253321 None:intergenic 35.0%
TGTATTATAGGTTTAGCCCT+AGG + Chr2:80252604-80252623 None:intergenic 35.0%
TTCATACTATTCTAGGCAAC+AGG - Chr2:80252962-80252981 MsG0280011153.01.T01:CDS 35.0%
! AGTATGATTTGGATTTGGAC+AGG - Chr2:80253090-80253109 MsG0280011153.01.T01:CDS 35.0%
! GAAGATGTTGTTGTTGAAGA+TGG + Chr2:80253962-80253981 None:intergenic 35.0%
! GAGTGAGAAGTACACAATAA+TGG - Chr2:80252702-80252721 MsG0280011153.01.T01:CDS 35.0%
! GTGAGAAGTACACAATAATG+GGG - Chr2:80252704-80252723 MsG0280011153.01.T01:CDS 35.0%
! TCCACTTGATGATCATTCTT+TGG + Chr2:80253905-80253924 None:intergenic 35.0%
! TTAAGACCTGATTTGAAACG+TGG - Chr2:80252901-80252920 MsG0280011153.01.T01:CDS 35.0%
!! ACTGGTTGATAGAATGATAG+TGG + Chr2:80253992-80254011 None:intergenic 35.0%
!! CTTTCAACAGAAGCATTTCT+AGG + Chr2:80253254-80253273 None:intergenic 35.0%
!! TTTGATGATGGTACTGTTTC+AGG + Chr2:80253473-80253492 None:intergenic 35.0%
ACCAGGAAGAACAGATAATG+AGG - Chr2:80253136-80253155 MsG0280011153.01.T01:CDS 40.0%
ACCTCATTATCTGTTCTTCC+TGG + Chr2:80253140-80253159 None:intergenic 40.0%
ACTCTTGCTGCAATAACAGA+AGG - Chr2:80252731-80252750 MsG0280011153.01.T01:CDS 40.0%
ATAATGAGAGCAGCTTCTTG+TGG + Chr2:80252937-80252956 None:intergenic 40.0%
ATACCTTGTAGGATTGGAGT+TGG + Chr2:80253368-80253387 None:intergenic 40.0%
ATCTGATCAATCTGAGAGTG+AGG - Chr2:80252347-80252366 MsG0280011153.01.T01:CDS 40.0%
ATGGCCAATGTGTATCTGTT+AGG - Chr2:80252276-80252295 MsG0280011153.01.T01:CDS 40.0%
CACTCTCAGATTGATCAGAT+GGG + Chr2:80252347-80252366 None:intergenic 40.0%
CAGTTAGGGTTTGTAGCAAA+GGG + Chr2:80252443-80252462 None:intergenic 40.0%
GATTGGAGTTGGGATATTGA+TGG + Chr2:80253357-80253376 None:intergenic 40.0%
GGTACTGTTTCAGGCAATAT+TGG + Chr2:80253464-80253483 None:intergenic 40.0%
GTTTAGCCCTAGGTTACAAA+TGG + Chr2:80252594-80252613 None:intergenic 40.0%
TAATGTGGGATGATGTACCA+TGG + Chr2:80252471-80252490 None:intergenic 40.0%
TACCTTGTAGGATTGGAGTT+GGG + Chr2:80253367-80253386 None:intergenic 40.0%
TCACTCTCAGATTGATCAGA+TGG + Chr2:80252348-80252367 None:intergenic 40.0%
TCTGATCAATCTGAGAGTGA+GGG - Chr2:80252348-80252367 MsG0280011153.01.T01:CDS 40.0%
! ATGATTTGGATTTGGACAGG+TGG - Chr2:80253093-80253112 MsG0280011153.01.T01:CDS 40.0%
! CAGATAGCAAAGCATTTACC+AGG - Chr2:80253119-80253138 MsG0280011153.01.T01:CDS 40.0%
! CTTTTTGCACAATAGGGTCA+AGG + Chr2:80253691-80253710 None:intergenic 40.0%
! GGATATTGATGGGAAGGTAT+AGG + Chr2:80253346-80253365 None:intergenic 40.0%
! TATTGATGGGAAGGTATAGG+TGG + Chr2:80253343-80253362 None:intergenic 40.0%
! TGATTTGGATTTGGACAGGT+GGG - Chr2:80253094-80253113 MsG0280011153.01.T01:CDS 40.0%
!! ATAGGTTTTGTGAGAGTGAC+TGG + Chr2:80254010-80254029 None:intergenic 40.0%
!! TTGGGTTGCAACATCACTTT+TGG + Chr2:80253579-80253598 None:intergenic 40.0%
ATAGGGCCTACAAATGTTGC+AGG - Chr2:80252398-80252417 MsG0280011153.01.T01:CDS 45.0%
ATCCCAACTCCAATCCTACA+AGG - Chr2:80253362-80253381 MsG0280011153.01.T01:CDS 45.0%
CCAGTTAGGGTTTGTAGCAA+AGG + Chr2:80252444-80252463 None:intergenic 45.0%
CCTTTGCTACAAACCCTAAC+TGG - Chr2:80252441-80252460 MsG0280011153.01.T01:CDS 45.0%
GAAGGTGAAAGAGAGGACTA+TGG - Chr2:80252749-80252768 MsG0280011153.01.T01:CDS 45.0%
GAGTTGGGATATTGATGGGA+AGG + Chr2:80253352-80253371 None:intergenic 45.0%
TAGGGCCTACAAATGTTGCA+GGG - Chr2:80252399-80252418 MsG0280011153.01.T01:CDS 45.0%
TCTGCAGTCCTGCAAGTTTA+GGG + Chr2:80252843-80252862 None:intergenic 45.0%
TGTCACCCTGCAACATTTGT+AGG + Chr2:80252407-80252426 None:intergenic 45.0%
TGTCATGCATGCAGACTTGT+GGG + Chr2:80252310-80252329 None:intergenic 45.0%
!! GGTTGCAACATCACTTTTGG+TGG + Chr2:80253576-80253595 None:intergenic 45.0%
AAACCCTAACTGGTCCACCA+TGG - Chr2:80252451-80252470 MsG0280011153.01.T01:CDS 50.0%
AGCTCTGTCCCTAAACTTGC+AGG - Chr2:80252832-80252851 MsG0280011153.01.T01:CDS 50.0%
CTCTGCAGTCCTGCAAGTTT+AGG + Chr2:80252844-80252863 None:intergenic 50.0%
GCATGCATGACACGTGTACA+AGG - Chr2:80252318-80252337 MsG0280011153.01.T01:CDS 50.0%
GTGTCATGCATGCAGACTTG+TGG + Chr2:80252311-80252330 None:intergenic 50.0%
TGCTGCTGCTGCCATGTATT+TGG + Chr2:80253638-80253657 None:intergenic 50.0%
TGTGGGATGATGTACCATGG+TGG + Chr2:80252468-80252487 None:intergenic 50.0%
!! GTACCATGGTGGACCAGTTA+GGG + Chr2:80252457-80252476 None:intergenic 50.0%
!! TGTACCATGGTGGACCAGTT+AGG + Chr2:80252458-80252477 None:intergenic 50.0%
CTTGCAGGACTGCAGAGATG+TGG - Chr2:80252847-80252866 MsG0280011153.01.T01:CDS 55.0%
Chromosome Type Strat End Strand Name
Chr2 gene 80252276 80254039 80252276 ID=MsG0280011153.01;Name=MsG0280011153.01
Chr2 mRNA 80252276 80254039 80252276 ID=MsG0280011153.01.T01;Parent=MsG0280011153.01;Name=MsG0280011153.01.T01;_AED=0.22;_eAED=0.22;_QI=0|0|0|0.66|1|1|3|0|381
Chr2 exon 80253952 80254039 80253952 ID=MsG0280011153.01.T01:exon:10275;Parent=MsG0280011153.01.T01
Chr2 exon 80253332 80253461 80253332 ID=MsG0280011153.01.T01:exon:10274;Parent=MsG0280011153.01.T01
Chr2 exon 80252276 80253203 80252276 ID=MsG0280011153.01.T01:exon:10273;Parent=MsG0280011153.01.T01
Chr2 CDS 80253952 80254039 80253952 ID=MsG0280011153.01.T01:cds;Parent=MsG0280011153.01.T01
Chr2 CDS 80253332 80253461 80253332 ID=MsG0280011153.01.T01:cds;Parent=MsG0280011153.01.T01
Chr2 CDS 80252276 80253203 80252276 ID=MsG0280011153.01.T01:cds;Parent=MsG0280011153.01.T01
Gene Sequence

>MsG0280011153.01.T01

ATGGCCAATGTGTATCTGTTAGGACATAGGACCCACAAGTCTGCATGCATGACACGTGTACAAGGTAGCCCATCTGATCAATCTGAGAGACTGCAGAGATGTGGAAAAAGTTGCAGATTGAGATGGATAAATTATTTAAGACCTGATTTGAAACGTGGAAGTTTTTCTCCACAAGAAGCTGCTCTCATTATTGAACTTCATACTATTCTAGGCAACAGGTGGGCTCAGATAGCAAAGCATTTACCAGGAAGAACAGATAATGAGGTGAAGAACTTTTGGAATTCAAGCATAAAGAAGAAACTACTTTCACATGATTTTGTTCCCACTTCTTTAGCCACATTTTCTGATATTCACTGTCCTAGAAATGCTTCTGTTGAAAGTTTCTTCCCTTTATTTAATGACAATCCTATCCTTAACTCCAATCATCAATATCATCACTTTGACAACCACCTATACCTTCCCATCAATATCCCAACTCCAATCCTACAAGGTATTGATCATCAAAATGATATCAAAAATATTGATACCAACAGTTATAATCCCAATTTCCTACATGTTCTGAATAATCCAATATTGCCTGAAACAGTACCATCATCAAATATTCCATCTTCTTATGAATTAGATACATGGTCATTAATTCATCATCTCAATCCAAATATTCAAGAAAATCATCAAATCACCACCAAAAGTGATGTTGCAACCCAAAATTATAATATTGTTGATCAGAATTTTATCAATATGCCAAATACATGGCAGCAGCAGCACTATGATAGTAATAGTCATTTAGTGAATCACCTTGACCCTATTGTGCAAAAAGTCTTTGAAAGTGAAACCATTAAGGATAATTATGTTTGTAGCGTCCCATTTTCTTCTTCTGCTTCTTCACAAGAACATGATCATCATCATCATCATGATGGTATCAACCAAATTACTGATCGGTGTTATAATACAGATCATTATCAAGGTGCTATAATTTGTCCAAAACAAGATCATCAAGTTGTTGCTGCACCAAAGAATGATCATCAAGTGGAGTATAACATCGAAGCTCTCATCATGTCATCAATGCCATCTTCAACAACAACATCTTCTTCATCACCACTATCATTCTATCAACCAGTCACTCTCACAAAACCTATCCTTCCTTAA

Protein sequence

>MsG0280011153.01.T01

MANVYLLGHRTHKSACMTRVQGSPSDQSERLQRCGKSCRLRWINYLRPDLKRGSFSPQEAALIIELHTILGNRWAQIAKHLPGRTDNEVKNFWNSSIKKKLLSHDFVPTSLATFSDIHCPRNASVESFFPLFNDNPILNSNHQYHHFDNHLYLPINIPTPILQGIDHQNDIKNIDTNSYNPNFLHVLNNPILPETVPSSNIPSSYELDTWSLIHHLNPNIQENHQITTKSDVATQNYNIVDQNFINMPNTWQQQHYDSNSHLVNHLDPIVQKVFESETIKDNYVCSVPFSSSASSQEHDHHHHHDGINQITDRCYNTDHYQGAIICPKQDHQVVAAPKNDHQVEYNIEALIMSSMPSSTTTSSSSPLSFYQPVTLTKPILP*