Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0280011239.01.T01 | XP_003597642.1 | 90.226 | 399 | 19 | 2 | 1 | 386 | 1 | 392 | 0 | 687 |
MsG0280011239.01.T02 | XP_003597642.1 | 93.484 | 399 | 19 | 1 | 1 | 399 | 1 | 392 | 0 | 723 |
MsG0280011239.01.T05 | XP_003597642.1 | 93.75 | 64 | 4 | 0 | 1 | 64 | 329 | 392 | 5.79E-33 | 126 |
MsG0280011239.01.T04 | XP_003597642.1 | 95.327 | 107 | 5 | 0 | 1 | 107 | 286 | 392 | 3.01E-56 | 189 |
MsG0280011239.01.T03 | XP_003597642.1 | 96.094 | 128 | 5 | 0 | 1 | 128 | 265 | 392 | 2.31E-82 | 256 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0280011239.01.T01 | Q8S3D2 | 55.822 | 292 | 100 | 10 | 105 | 378 | 86 | 366 | 2.00E-84 | 264 |
MsG0280011239.01.T02 | Q8S3D2 | 55.326 | 291 | 116 | 8 | 105 | 391 | 86 | 366 | 2.44E-84 | 265 |
MsG0280011239.01.T03 | Q8S3D2 | 74.797 | 123 | 27 | 2 | 1 | 120 | 245 | 366 | 1.77E-55 | 180 |
MsG0280011239.01.T04 | Q8S3D2 | 72.549 | 102 | 25 | 1 | 1 | 99 | 265 | 366 | 2.27E-42 | 145 |
MsG0280011239.01.T05 | Q8S3D2 | 61.017 | 59 | 20 | 1 | 1 | 56 | 308 | 366 | 7.17E-14 | 67 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0280011239.01.T01 | G7IHW4 | 90.226 | 399 | 19 | 2 | 1 | 386 | 1 | 392 | 0.0 | 687 |
MsG0280011239.01.T02 | G7IHW4 | 93.484 | 399 | 19 | 1 | 1 | 399 | 1 | 392 | 0.0 | 723 |
MsG0280011239.01.T03 | G7IHW4 | 96.094 | 128 | 5 | 0 | 1 | 128 | 265 | 392 | 1.11e-82 | 256 |
MsG0280011239.01.T04 | G7IHW4 | 95.327 | 107 | 5 | 0 | 1 | 107 | 286 | 392 | 1.44e-56 | 189 |
MsG0280011239.01.T05 | G7IHW4 | 93.750 | 64 | 4 | 0 | 1 | 64 | 329 | 392 | 2.77e-33 | 126 |
Gene ID | Type | Classification |
---|---|---|
MsG0280011239.01.T03 | TF | bHLH |
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0280011239.01.T01 | MTR_2g100490 | 90.226 | 399 | 19 | 2 | 1 | 386 | 1 | 392 | 0.0 | 687 |
MsG0280011239.01.T01 | MTR_8g015450 | 52.847 | 439 | 122 | 21 | 1 | 375 | 1 | 418 | 6.57e-105 | 316 |
MsG0280011239.01.T01 | MTR_3g101810 | 62.366 | 93 | 34 | 1 | 255 | 347 | 143 | 234 | 8.68e-35 | 129 |
MsG0280011239.01.T01 | MTR_8g093500 | 62.366 | 93 | 34 | 1 | 256 | 348 | 87 | 178 | 6.10e-34 | 127 |
MsG0280011239.01.T01 | MTR_5g017210 | 61.682 | 107 | 39 | 2 | 245 | 350 | 98 | 203 | 1.69e-28 | 112 |
MsG0280011239.01.T01 | MTR_7g069590 | 52.941 | 68 | 32 | 0 | 290 | 357 | 32 | 99 | 8.83e-20 | 85.5 |
MsG0280011239.01.T01 | MTR_1g018090 | 62.963 | 54 | 20 | 0 | 293 | 346 | 283 | 336 | 9.18e-17 | 81.3 |
MsG0280011239.01.T01 | MTR_5g079500 | 58.929 | 56 | 23 | 0 | 291 | 346 | 225 | 280 | 4.39e-16 | 78.6 |
MsG0280011239.01.T01 | MTR_1g106460 | 49.254 | 67 | 34 | 0 | 280 | 346 | 234 | 300 | 6.73e-16 | 78.6 |
MsG0280011239.01.T01 | MTR_5g005110 | 55.357 | 56 | 25 | 0 | 291 | 346 | 231 | 286 | 2.11e-15 | 77.0 |
MsG0280011239.01.T01 | MTR_1g106470 | 55.357 | 56 | 25 | 0 | 291 | 346 | 203 | 258 | 3.64e-15 | 75.5 |
MsG0280011239.01.T01 | MTR_3g103030 | 50.794 | 63 | 31 | 0 | 284 | 346 | 229 | 291 | 1.01e-14 | 74.7 |
MsG0280011239.01.T01 | MTR_2g067000 | 58.491 | 53 | 22 | 0 | 295 | 347 | 168 | 220 | 1.20e-13 | 71.2 |
MsG0280011239.01.T01 | MTR_1g060700 | 59.259 | 54 | 22 | 0 | 294 | 347 | 357 | 410 | 1.35e-13 | 72.4 |
MsG0280011239.01.T01 | MTR_4g131160 | 55.357 | 56 | 25 | 0 | 291 | 346 | 206 | 261 | 1.87e-13 | 71.6 |
MsG0280011239.01.T01 | MTR_4g131160 | 55.357 | 56 | 25 | 0 | 291 | 346 | 203 | 258 | 1.90e-13 | 71.6 |
MsG0280011239.01.T01 | MTR_1g080890 | 55.357 | 56 | 25 | 0 | 291 | 346 | 200 | 255 | 5.98e-13 | 69.7 |
MsG0280011239.01.T01 | MTR_1g106480 | 52.941 | 51 | 24 | 0 | 296 | 346 | 81 | 131 | 1.15e-12 | 65.9 |
MsG0280011239.01.T02 | MTR_2g100490 | 93.484 | 399 | 19 | 1 | 1 | 399 | 1 | 392 | 0.0 | 723 |
MsG0280011239.01.T02 | MTR_8g015450 | 51.522 | 460 | 109 | 22 | 1 | 388 | 1 | 418 | 2.39e-106 | 320 |
MsG0280011239.01.T02 | MTR_3g101810 | 52.679 | 112 | 52 | 1 | 268 | 379 | 143 | 253 | 1.05e-34 | 129 |
MsG0280011239.01.T02 | MTR_8g093500 | 62.366 | 93 | 34 | 1 | 269 | 361 | 87 | 178 | 8.11e-34 | 127 |
MsG0280011239.01.T02 | MTR_5g017210 | 61.682 | 107 | 39 | 2 | 258 | 363 | 98 | 203 | 2.09e-28 | 112 |
MsG0280011239.01.T02 | MTR_7g069590 | 52.941 | 68 | 32 | 0 | 303 | 370 | 32 | 99 | 9.47e-20 | 85.9 |
MsG0280011239.01.T02 | MTR_1g018090 | 62.963 | 54 | 20 | 0 | 306 | 359 | 283 | 336 | 9.97e-17 | 81.3 |
MsG0280011239.01.T02 | MTR_5g079500 | 58.929 | 56 | 23 | 0 | 304 | 359 | 225 | 280 | 4.94e-16 | 78.6 |
MsG0280011239.01.T02 | MTR_1g106460 | 49.254 | 67 | 34 | 0 | 293 | 359 | 234 | 300 | 7.94e-16 | 78.2 |
MsG0280011239.01.T02 | MTR_5g005110 | 55.357 | 56 | 25 | 0 | 304 | 359 | 231 | 286 | 2.48e-15 | 77.0 |
MsG0280011239.01.T02 | MTR_1g106470 | 55.357 | 56 | 25 | 0 | 304 | 359 | 203 | 258 | 4.21e-15 | 75.5 |
MsG0280011239.01.T02 | MTR_3g103030 | 50.794 | 63 | 31 | 0 | 297 | 359 | 229 | 291 | 1.13e-14 | 74.7 |
MsG0280011239.01.T02 | MTR_2g067000 | 58.491 | 53 | 22 | 0 | 308 | 360 | 168 | 220 | 1.28e-13 | 71.2 |
MsG0280011239.01.T02 | MTR_1g060700 | 59.259 | 54 | 22 | 0 | 307 | 360 | 357 | 410 | 1.55e-13 | 72.4 |
MsG0280011239.01.T02 | MTR_4g131160 | 55.357 | 56 | 25 | 0 | 304 | 359 | 203 | 258 | 2.18e-13 | 71.6 |
MsG0280011239.01.T02 | MTR_4g131160 | 55.357 | 56 | 25 | 0 | 304 | 359 | 206 | 261 | 2.28e-13 | 71.6 |
MsG0280011239.01.T02 | MTR_1g080890 | 55.357 | 56 | 25 | 0 | 304 | 359 | 200 | 255 | 7.25e-13 | 69.7 |
MsG0280011239.01.T02 | MTR_1g106480 | 52.941 | 51 | 24 | 0 | 309 | 359 | 81 | 131 | 1.15e-12 | 65.9 |
MsG0280011239.01.T05 | MTR_2g100490 | 93.750 | 64 | 4 | 0 | 1 | 64 | 329 | 392 | 7.01e-37 | 126 |
MsG0280011239.01.T05 | MTR_8g015450 | 79.245 | 53 | 10 | 1 | 1 | 53 | 367 | 418 | 1.47e-21 | 85.9 |
MsG0280011239.01.T04 | MTR_2g100490 | 95.327 | 107 | 5 | 0 | 1 | 107 | 286 | 392 | 3.64e-60 | 189 |
MsG0280011239.01.T04 | MTR_8g015450 | 85.263 | 95 | 13 | 1 | 2 | 96 | 325 | 418 | 2.96e-42 | 143 |
MsG0280011239.01.T04 | MTR_8g093500 | 71.014 | 69 | 20 | 0 | 1 | 69 | 110 | 178 | 1.30e-30 | 109 |
MsG0280011239.01.T04 | MTR_3g101810 | 70.588 | 68 | 20 | 0 | 1 | 68 | 167 | 234 | 1.73e-30 | 109 |
MsG0280011239.01.T04 | MTR_5g017210 | 74.648 | 71 | 18 | 0 | 1 | 71 | 133 | 203 | 1.21e-23 | 91.3 |
MsG0280011239.01.T04 | MTR_7g069590 | 52.941 | 68 | 32 | 0 | 11 | 78 | 32 | 99 | 1.58e-22 | 85.9 |
MsG0280011239.01.T04 | MTR_1g018090 | 62.963 | 54 | 20 | 0 | 14 | 67 | 283 | 336 | 1.11e-18 | 79.7 |
MsG0280011239.01.T04 | MTR_5g079500 | 58.929 | 56 | 23 | 0 | 12 | 67 | 225 | 280 | 6.41e-18 | 77.0 |
MsG0280011239.01.T04 | MTR_1g106460 | 49.254 | 67 | 34 | 0 | 1 | 67 | 234 | 300 | 1.28e-17 | 76.3 |
MsG0280011239.01.T04 | MTR_5g005110 | 55.357 | 56 | 25 | 0 | 12 | 67 | 231 | 286 | 5.50e-17 | 74.7 |
MsG0280011239.01.T04 | MTR_1g106470 | 55.357 | 56 | 25 | 0 | 12 | 67 | 203 | 258 | 9.59e-17 | 73.6 |
MsG0280011239.01.T04 | MTR_3g103030 | 50.794 | 63 | 31 | 0 | 5 | 67 | 229 | 291 | 2.32e-16 | 72.8 |
MsG0280011239.01.T04 | MTR_1g060700 | 59.259 | 54 | 22 | 0 | 15 | 68 | 357 | 410 | 1.95e-15 | 70.9 |
MsG0280011239.01.T04 | MTR_2g067000 | 58.491 | 53 | 22 | 0 | 16 | 68 | 168 | 220 | 3.84e-15 | 69.3 |
MsG0280011239.01.T04 | MTR_4g131160 | 55.357 | 56 | 25 | 0 | 12 | 67 | 203 | 258 | 5.26e-15 | 69.3 |
MsG0280011239.01.T04 | MTR_4g131160 | 55.357 | 56 | 25 | 0 | 12 | 67 | 206 | 261 | 5.34e-15 | 69.3 |
MsG0280011239.01.T04 | MTR_1g080890 | 55.357 | 56 | 25 | 0 | 12 | 67 | 200 | 255 | 1.30e-14 | 68.2 |
MsG0280011239.01.T04 | MTR_1g106480 | 58.696 | 46 | 19 | 0 | 22 | 67 | 86 | 131 | 6.49e-14 | 63.9 |
MsG0280011239.01.T04 | MTR_2g089070 | 46.429 | 56 | 30 | 0 | 15 | 70 | 146 | 201 | 8.28e-13 | 62.8 |
MsG0280011239.01.T04 | MTR_4g033295 | 49.206 | 63 | 31 | 1 | 6 | 67 | 119 | 181 | 6.45e-12 | 59.3 |
MsG0280011239.01.T03 | MTR_2g100490 | 96.094 | 128 | 5 | 0 | 1 | 128 | 265 | 392 | 2.80e-86 | 256 |
MsG0280011239.01.T03 | MTR_8g015450 | 79.339 | 121 | 19 | 3 | 1 | 117 | 300 | 418 | 1.36e-51 | 169 |
MsG0280011239.01.T03 | MTR_3g101810 | 64.045 | 89 | 31 | 1 | 1 | 89 | 147 | 234 | 7.76e-36 | 124 |
MsG0280011239.01.T03 | MTR_8g093500 | 64.444 | 90 | 31 | 1 | 1 | 90 | 90 | 178 | 9.17e-36 | 124 |
MsG0280011239.01.T03 | MTR_5g017210 | 67.391 | 92 | 29 | 1 | 1 | 92 | 113 | 203 | 1.43e-29 | 107 |
MsG0280011239.01.T03 | MTR_7g069590 | 52.941 | 68 | 32 | 0 | 32 | 99 | 32 | 99 | 3.93e-22 | 85.9 |
MsG0280011239.01.T03 | MTR_1g018090 | 62.963 | 54 | 20 | 0 | 35 | 88 | 283 | 336 | 2.92e-18 | 79.3 |
MsG0280011239.01.T03 | MTR_5g079500 | 58.929 | 56 | 23 | 0 | 33 | 88 | 225 | 280 | 1.81e-17 | 76.6 |
MsG0280011239.01.T03 | MTR_1g106460 | 49.254 | 67 | 34 | 0 | 22 | 88 | 234 | 300 | 4.24e-17 | 75.9 |
MsG0280011239.01.T03 | MTR_5g005110 | 57.407 | 54 | 23 | 0 | 35 | 88 | 233 | 286 | 1.37e-16 | 74.3 |
MsG0280011239.01.T03 | MTR_1g106470 | 55.357 | 56 | 25 | 0 | 33 | 88 | 203 | 258 | 3.12e-16 | 73.2 |
MsG0280011239.01.T03 | MTR_3g103030 | 50.794 | 63 | 31 | 0 | 26 | 88 | 229 | 291 | 6.64e-16 | 72.4 |
MsG0280011239.01.T03 | MTR_1g060700 | 59.259 | 54 | 22 | 0 | 36 | 89 | 357 | 410 | 5.29e-15 | 70.5 |
MsG0280011239.01.T03 | MTR_2g067000 | 58.491 | 53 | 22 | 0 | 37 | 89 | 168 | 220 | 1.08e-14 | 68.9 |
MsG0280011239.01.T03 | MTR_4g131160 | 54.386 | 57 | 26 | 0 | 33 | 89 | 206 | 262 | 1.31e-14 | 69.3 |
MsG0280011239.01.T03 | MTR_4g131160 | 54.386 | 57 | 26 | 0 | 33 | 89 | 203 | 259 | 1.32e-14 | 69.3 |
MsG0280011239.01.T03 | MTR_1g080890 | 55.357 | 56 | 25 | 0 | 33 | 88 | 200 | 255 | 3.41e-14 | 67.8 |
MsG0280011239.01.T03 | MTR_1g106480 | 58.696 | 46 | 19 | 0 | 43 | 88 | 86 | 131 | 1.58e-13 | 63.5 |
MsG0280011239.01.T03 | MTR_2g089070 | 46.429 | 56 | 30 | 0 | 36 | 91 | 146 | 201 | 1.77e-12 | 62.8 |
MsG0280011239.01.T03 | MTR_4g033295 | 51.724 | 58 | 27 | 1 | 32 | 88 | 124 | 181 | 1.66e-11 | 58.9 |
MsG0280011239.01.T03 | MTR_7g110810 | 41.333 | 75 | 31 | 2 | 21 | 86 | 192 | 262 | 9.70e-11 | 58.2 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0280011239.01.T01 | AT3G21330 | 55.822 | 292 | 100 | 10 | 105 | 378 | 86 | 366 | 2.03e-85 | 264 |
MsG0280011239.01.T01 | AT4G00120 | 61.798 | 89 | 33 | 1 | 259 | 347 | 88 | 175 | 1.57e-29 | 113 |
MsG0280011239.01.T01 | AT3G50330 | 52.941 | 136 | 60 | 4 | 214 | 347 | 49 | 182 | 5.95e-26 | 104 |
MsG0280011239.01.T01 | AT5G67060 | 64.130 | 92 | 32 | 1 | 256 | 347 | 83 | 173 | 7.40e-26 | 104 |
MsG0280011239.01.T01 | AT5G67060 | 64.130 | 92 | 32 | 1 | 256 | 347 | 95 | 185 | 7.83e-26 | 104 |
MsG0280011239.01.T01 | AT5G09750 | 62.366 | 93 | 34 | 1 | 256 | 348 | 92 | 183 | 4.18e-24 | 99.8 |
MsG0280011239.01.T01 | AT5G01305 | 57.353 | 68 | 29 | 0 | 282 | 349 | 35 | 102 | 1.62e-20 | 88.2 |
MsG0280011239.01.T01 | AT1G66470 | 39.450 | 109 | 64 | 1 | 238 | 346 | 151 | 257 | 6.63e-17 | 80.9 |
MsG0280011239.01.T01 | AT5G37800 | 46.067 | 89 | 40 | 1 | 266 | 346 | 175 | 263 | 8.94e-17 | 80.9 |
MsG0280011239.01.T01 | AT5G43175 | 46.269 | 67 | 36 | 0 | 280 | 346 | 128 | 194 | 3.00e-16 | 77.8 |
MsG0280011239.01.T01 | AT4G33880 | 53.226 | 62 | 29 | 0 | 285 | 346 | 267 | 328 | 4.60e-16 | 79.3 |
MsG0280011239.01.T01 | AT2G14760 | 53.226 | 62 | 29 | 0 | 285 | 346 | 238 | 299 | 7.39e-16 | 78.2 |
MsG0280011239.01.T01 | AT1G27740 | 50.000 | 62 | 31 | 0 | 285 | 346 | 168 | 229 | 6.54e-15 | 74.3 |
MsG0280011239.01.T01 | AT4G30980 | 54.545 | 66 | 29 | 1 | 282 | 346 | 127 | 192 | 1.13e-14 | 74.7 |
MsG0280011239.01.T01 | AT2G24260 | 57.143 | 56 | 24 | 0 | 291 | 346 | 42 | 97 | 1.54e-14 | 73.2 |
MsG0280011239.01.T01 | AT4G30980 | 54.545 | 66 | 29 | 1 | 282 | 346 | 175 | 240 | 1.60e-14 | 74.7 |
MsG0280011239.01.T01 | AT2G24260 | 57.143 | 56 | 24 | 0 | 291 | 346 | 145 | 200 | 2.81e-14 | 73.9 |
MsG0280011239.01.T01 | AT5G58010 | 49.275 | 69 | 34 | 1 | 279 | 346 | 93 | 161 | 6.57e-13 | 69.3 |
MsG0280011239.01.T01 | AT2G14760 | 44.000 | 75 | 29 | 1 | 285 | 346 | 238 | 312 | 1.03e-12 | 68.9 |
MsG0280011239.01.T02 | AT3G21330 | 55.326 | 291 | 116 | 8 | 105 | 391 | 86 | 366 | 2.49e-85 | 265 |
MsG0280011239.01.T02 | AT4G00120 | 61.798 | 89 | 33 | 1 | 272 | 360 | 88 | 175 | 1.87e-29 | 113 |
MsG0280011239.01.T02 | AT3G50330 | 52.941 | 136 | 60 | 4 | 227 | 360 | 49 | 182 | 6.62e-26 | 105 |
MsG0280011239.01.T02 | AT5G67060 | 64.130 | 92 | 32 | 1 | 269 | 360 | 83 | 173 | 1.02e-25 | 104 |
MsG0280011239.01.T02 | AT5G67060 | 64.130 | 92 | 32 | 1 | 269 | 360 | 95 | 185 | 1.10e-25 | 104 |
MsG0280011239.01.T02 | AT5G09750 | 62.366 | 93 | 34 | 1 | 269 | 361 | 92 | 183 | 4.86e-24 | 99.8 |
MsG0280011239.01.T02 | AT5G01305 | 57.353 | 68 | 29 | 0 | 295 | 362 | 35 | 102 | 1.76e-20 | 88.2 |
MsG0280011239.01.T02 | AT1G66470 | 39.450 | 109 | 64 | 1 | 251 | 359 | 151 | 257 | 6.25e-17 | 81.3 |
MsG0280011239.01.T02 | AT5G37800 | 46.067 | 89 | 40 | 1 | 279 | 359 | 175 | 263 | 1.08e-16 | 80.5 |
MsG0280011239.01.T02 | AT5G43175 | 46.269 | 67 | 36 | 0 | 293 | 359 | 128 | 194 | 3.38e-16 | 77.8 |
MsG0280011239.01.T02 | AT4G33880 | 53.226 | 62 | 29 | 0 | 298 | 359 | 267 | 328 | 5.34e-16 | 79.0 |
MsG0280011239.01.T02 | AT2G14760 | 53.226 | 62 | 29 | 0 | 298 | 359 | 238 | 299 | 8.08e-16 | 78.2 |
MsG0280011239.01.T02 | AT1G27740 | 50.000 | 62 | 31 | 0 | 298 | 359 | 168 | 229 | 8.03e-15 | 74.3 |
MsG0280011239.01.T02 | AT4G30980 | 54.545 | 66 | 29 | 1 | 295 | 359 | 127 | 192 | 1.27e-14 | 74.7 |
MsG0280011239.01.T02 | AT4G30980 | 54.545 | 66 | 29 | 1 | 295 | 359 | 175 | 240 | 1.83e-14 | 74.7 |
MsG0280011239.01.T02 | AT2G24260 | 57.143 | 56 | 24 | 0 | 304 | 359 | 42 | 97 | 1.92e-14 | 73.2 |
MsG0280011239.01.T02 | AT2G24260 | 57.143 | 56 | 24 | 0 | 304 | 359 | 145 | 200 | 3.37e-14 | 73.6 |
MsG0280011239.01.T02 | AT5G58010 | 49.275 | 69 | 34 | 1 | 292 | 359 | 93 | 161 | 7.41e-13 | 69.3 |
MsG0280011239.01.T02 | AT2G14760 | 44.000 | 75 | 29 | 1 | 298 | 359 | 238 | 312 | 1.15e-12 | 68.9 |
MsG0280011239.01.T05 | AT3G21330 | 61.017 | 59 | 20 | 1 | 1 | 56 | 308 | 366 | 7.31e-15 | 67.0 |
MsG0280011239.01.T04 | AT3G21330 | 72.549 | 102 | 25 | 1 | 1 | 99 | 265 | 366 | 2.31e-43 | 145 |
MsG0280011239.01.T04 | AT4G00120 | 57.955 | 88 | 35 | 1 | 3 | 90 | 110 | 195 | 1.97e-28 | 102 |
MsG0280011239.01.T04 | AT5G01305 | 51.852 | 81 | 36 | 1 | 3 | 80 | 35 | 115 | 9.90e-24 | 89.7 |
MsG0280011239.01.T04 | AT3G50330 | 78.462 | 65 | 14 | 0 | 4 | 68 | 118 | 182 | 1.51e-22 | 88.2 |
MsG0280011239.01.T04 | AT5G09750 | 72.464 | 69 | 19 | 0 | 1 | 69 | 115 | 183 | 4.31e-22 | 86.7 |
MsG0280011239.01.T04 | AT5G67060 | 76.923 | 65 | 15 | 0 | 4 | 68 | 109 | 173 | 4.49e-22 | 86.7 |
MsG0280011239.01.T04 | AT5G67060 | 76.923 | 65 | 15 | 0 | 4 | 68 | 121 | 185 | 4.53e-22 | 87.0 |
MsG0280011239.01.T04 | AT5G43175 | 46.269 | 67 | 36 | 0 | 1 | 67 | 128 | 194 | 6.53e-18 | 75.9 |
MsG0280011239.01.T04 | AT5G37800 | 61.111 | 54 | 21 | 0 | 14 | 67 | 210 | 263 | 1.11e-17 | 76.3 |
MsG0280011239.01.T04 | AT4G33880 | 53.226 | 62 | 29 | 0 | 6 | 67 | 267 | 328 | 1.17e-17 | 76.6 |
MsG0280011239.01.T04 | AT1G66470 | 53.846 | 65 | 30 | 0 | 3 | 67 | 193 | 257 | 1.66e-17 | 75.9 |
MsG0280011239.01.T04 | AT1G27740 | 50.000 | 62 | 31 | 0 | 6 | 67 | 168 | 229 | 1.25e-16 | 72.8 |
MsG0280011239.01.T04 | AT2G14760 | 55.172 | 58 | 26 | 0 | 12 | 69 | 244 | 301 | 3.55e-16 | 72.4 |
MsG0280011239.01.T04 | AT2G24260 | 57.143 | 56 | 24 | 0 | 12 | 67 | 42 | 97 | 4.43e-16 | 71.2 |
MsG0280011239.01.T04 | AT4G30980 | 54.545 | 66 | 29 | 1 | 3 | 67 | 127 | 192 | 6.86e-16 | 71.6 |
MsG0280011239.01.T04 | AT4G30980 | 53.731 | 67 | 30 | 1 | 3 | 68 | 175 | 241 | 7.56e-16 | 71.6 |
MsG0280011239.01.T04 | AT2G24260 | 57.143 | 56 | 24 | 0 | 12 | 67 | 145 | 200 | 6.81e-15 | 68.9 |
MsG0280011239.01.T04 | AT5G58010 | 49.254 | 67 | 33 | 1 | 2 | 67 | 95 | 161 | 1.42e-13 | 65.1 |
MsG0280011239.01.T04 | AT2G14760 | 45.070 | 71 | 26 | 1 | 12 | 69 | 244 | 314 | 8.78e-13 | 63.2 |
MsG0280011239.01.T03 | AT3G21330 | 74.797 | 123 | 27 | 2 | 1 | 120 | 245 | 366 | 1.81e-56 | 180 |
MsG0280011239.01.T03 | AT4G00120 | 53.153 | 111 | 49 | 2 | 1 | 111 | 88 | 195 | 1.49e-31 | 111 |
MsG0280011239.01.T03 | AT3G50330 | 66.292 | 89 | 29 | 1 | 1 | 89 | 95 | 182 | 2.96e-27 | 100 |
MsG0280011239.01.T03 | AT5G67060 | 65.169 | 89 | 30 | 1 | 1 | 89 | 86 | 173 | 3.82e-27 | 100 |
MsG0280011239.01.T03 | AT5G67060 | 65.169 | 89 | 30 | 1 | 1 | 89 | 98 | 185 | 4.30e-27 | 100 |
MsG0280011239.01.T03 | AT5G09750 | 64.444 | 90 | 31 | 1 | 1 | 90 | 95 | 183 | 6.65e-26 | 97.4 |
MsG0280011239.01.T03 | AT5G01305 | 51.852 | 81 | 36 | 1 | 24 | 101 | 35 | 115 | 2.16e-23 | 89.7 |
MsG0280011239.01.T03 | AT1G66470 | 45.783 | 83 | 45 | 0 | 6 | 88 | 175 | 257 | 2.13e-18 | 79.0 |
MsG0280011239.01.T03 | AT5G37800 | 47.059 | 85 | 37 | 1 | 12 | 88 | 179 | 263 | 5.87e-18 | 77.8 |
MsG0280011239.01.T03 | AT5G43175 | 46.269 | 67 | 36 | 0 | 22 | 88 | 128 | 194 | 1.75e-17 | 75.5 |
MsG0280011239.01.T03 | AT4G33880 | 53.226 | 62 | 29 | 0 | 27 | 88 | 267 | 328 | 3.78e-17 | 76.3 |
MsG0280011239.01.T03 | AT2G14760 | 53.226 | 62 | 29 | 0 | 27 | 88 | 238 | 299 | 5.46e-17 | 75.5 |
MsG0280011239.01.T03 | AT1G27740 | 48.438 | 64 | 33 | 0 | 27 | 90 | 168 | 231 | 2.95e-16 | 72.8 |
MsG0280011239.01.T03 | AT2G24260 | 56.140 | 57 | 25 | 0 | 33 | 89 | 42 | 98 | 1.04e-15 | 71.2 |
MsG0280011239.01.T03 | AT4G30980 | 53.731 | 67 | 30 | 1 | 24 | 89 | 127 | 193 | 1.50e-15 | 71.2 |
MsG0280011239.01.T03 | AT4G30980 | 53.731 | 67 | 30 | 1 | 24 | 89 | 175 | 241 | 1.78e-15 | 71.6 |
MsG0280011239.01.T03 | AT2G24260 | 56.140 | 57 | 25 | 0 | 33 | 89 | 145 | 201 | 1.84e-15 | 71.6 |
MsG0280011239.01.T03 | AT2G14760 | 44.000 | 75 | 29 | 1 | 27 | 88 | 238 | 312 | 1.07e-13 | 66.6 |
MsG0280011239.01.T03 | AT5G58010 | 49.275 | 69 | 34 | 1 | 21 | 88 | 93 | 161 | 1.55e-13 | 65.9 |
Find 84 sgRNAs with CRISPR-Local
Find 91 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TCTTCTTCTTCTACTGAATT+TGG | 0.150846 | 2:-81364345 | MsG0280011239.01.T02:CDS |
CATCTTGGTTTCTTTGACTT+TGG | 0.197671 | 2:+81364297 | None:intergenic |
ATTTAGGCCGGTGACGAATT+TGG | 0.200299 | 2:-81364136 | MsG0280011239.01.T02:CDS |
GATTTCAATCATGGGAATAT+TGG | 0.228711 | 2:+81363797 | None:intergenic |
GACAATGAAACTGATGAATT+TGG | 0.244336 | 2:+81364231 | None:intergenic |
AATATTGGATGTTGACATTA+GGG | 0.282359 | 2:+81363812 | None:intergenic |
CCAAGGTTCATTCCACAAAA+AGG | 0.291280 | 2:-81364416 | MsG0280011239.01.T02:CDS |
TCCCAACTGTTTCCAGCTCC+TGG | 0.305187 | 2:+81364822 | None:intergenic |
TTCATTTGTGCTATTGCCTC+TGG | 0.321358 | 2:+81364183 | None:intergenic |
GAATATTGGATGTTGACATT+AGG | 0.325949 | 2:+81363811 | None:intergenic |
TTTAGGCCGGTGACGAATTT+GGG | 0.332170 | 2:-81364135 | MsG0280011239.01.T02:CDS |
AAGTGATGGAAAAGCCTAAA+AGG | 0.336703 | 2:-81364107 | MsG0280011239.01.T02:CDS |
AAGGAGAAGGCTATGTTTGT+AGG | 0.339952 | 2:+81363859 | None:intergenic |
TGCCTAGCCGCCACAGTTTG+TGG | 0.350175 | 2:+81364060 | None:intergenic |
CTTGGTTTCTTTGACTTTGG+TGG | 0.356806 | 2:+81364300 | None:intergenic |
GATGATAATGATTTCAATCA+TGG | 0.362071 | 2:+81363788 | None:intergenic |
TGTGCTATTGCCTCTGGATC+AGG | 0.366599 | 2:+81364189 | None:intergenic |
TATATAGAGCTGCAGCATTT+AGG | 0.373879 | 2:-81364152 | MsG0280011239.01.T02:CDS |
CCAATCATACCCTTCACTTT+CGG | 0.383334 | 2:-81364784 | MsG0280011239.01.T02:CDS |
TACATATGGATTGTCTTAGC+TGG | 0.402802 | 2:-81364983 | None:intergenic |
AAACTGATGAATTTGGTTGC+TGG | 0.410865 | 2:+81364238 | None:intergenic |
AACTTTAGTGCAGTTTCCTC+TGG | 0.411517 | 2:-81364552 | MsG0280011239.01.T02:CDS |
GCCGGTGACGAATTTGGGTT+TGG | 0.412280 | 2:-81364130 | MsG0280011239.01.T02:CDS |
GTCTTGCAGAAGATTGTTCC+TGG | 0.420469 | 2:-81364006 | MsG0280011239.01.T02:CDS |
TGCATTCAAGGAACTGGATC+AGG | 0.432172 | 2:-81364487 | MsG0280011239.01.T02:CDS |
CCGAAAGTGAAGGGTATGAT+TGG | 0.436711 | 2:+81364784 | None:intergenic |
GCAGTATGCATTCAAGGAAC+TGG | 0.437343 | 2:-81364493 | MsG0280011239.01.T02:CDS |
ACTAATTCTGTTCAAGATGA+TGG | 0.443976 | 2:-81364618 | MsG0280011239.01.T02:CDS |
CATTGATGCAGTGTCCATCT+TGG | 0.445318 | 2:+81363978 | None:intergenic |
TACTCTTGCTGATTGGTTGG+TGG | 0.446984 | 2:+81364709 | None:intergenic |
CTGTGGCGGCTAGGCAAAGA+AGG | 0.454660 | 2:-81364053 | MsG0280011239.01.T02:CDS |
GGACACTTATTATCCCATCT+TGG | 0.463511 | 2:+81364282 | None:intergenic |
TAGAGCACAAGTCAAAGAAC+TGG | 0.468462 | 2:-81363923 | MsG0280011239.01.T02:CDS |
TTACCTTGATCTGAGGAAGC+TGG | 0.471387 | 2:+81364453 | None:intergenic |
GTAGTAGTACTCTTGCTGAT+TGG | 0.471486 | 2:+81364702 | None:intergenic |
GTCAAAGAACTGGAGAATCT+AGG | 0.474273 | 2:-81363913 | MsG0280011239.01.T02:CDS |
GGTTGAGTGTTCCACAAGAT+TGG | 0.479415 | 2:+81364930 | None:intergenic |
GGACATGCAGTATGCATTCA+AGG | 0.489351 | 2:-81364499 | MsG0280011239.01.T02:CDS |
CATGGGAATTGACTGGTTGA+AGG | 0.490980 | 2:+81363840 | None:intergenic |
TGGTGGGCCATGTTGAAATC+AGG | 0.494073 | 2:+81364726 | None:intergenic |
CAGAAGGTTCAACCAGGAGC+TGG | 0.494279 | 2:-81364834 | MsG0280011239.01.T02:CDS |
ACTCTTGCTGATTGGTTGGT+GGG | 0.498014 | 2:+81364710 | None:intergenic |
GTTCCACAAGATTGGTATGT+TGG | 0.503170 | 2:+81364938 | None:intergenic |
ACCAGGAGCTGGAAACAGTT+GGG | 0.515648 | 2:-81364823 | MsG0280011239.01.T02:CDS |
TAGTACTCTTGCTGATTGGT+TGG | 0.516116 | 2:+81364706 | None:intergenic |
ACATATGGATTGTCTTAGCT+GGG | 0.522229 | 2:-81364982 | None:intergenic |
GAATTTGGGTTTGGAAGTGA+TGG | 0.527963 | 2:-81364121 | MsG0280011239.01.T02:CDS |
TCTCCAGCTTCCTCAGATCA+AGG | 0.534533 | 2:-81364456 | MsG0280011239.01.T02:CDS |
TTACCAACATACCAATCTTG+TGG | 0.535200 | 2:-81364941 | MsG0280011239.01.T02:CDS |
AACCAGGAGCTGGAAACAGT+TGG | 0.539885 | 2:-81364824 | MsG0280011239.01.T02:CDS |
AGAGGCAATAGCACAAATGA+AGG | 0.541238 | 2:-81364181 | MsG0280011239.01.T02:CDS |
CTCTGGATCAGGCTCTTCAA+AGG | 0.548876 | 2:+81364200 | None:intergenic |
ATGATAATGATTTCAATCAT+GGG | 0.556089 | 2:+81363789 | None:intergenic |
AGATGGGATAATAAGTGTCC+TGG | 0.557228 | 2:-81364279 | MsG0280011239.01.T02:CDS |
GTGTCCATCTTGGTTCCACC+AGG | 0.564056 | 2:+81363988 | None:intergenic |
TAAAATCATTGATAATTCCA+AGG | 0.564539 | 2:-81364433 | MsG0280011239.01.T02:CDS |
TAGTCTCTTGCAAAGTCTTG+TGG | 0.568681 | 2:+81364909 | None:intergenic |
TGTTCCTGGTGGAACCAAGA+TGG | 0.571863 | 2:-81363992 | MsG0280011239.01.T02:CDS |
TCGATATTGACCGAAAGTGA+AGG | 0.573714 | 2:+81364774 | None:intergenic |
GAAGGGAAAGAATAAGTGAG+AGG | 0.579170 | 2:-81364035 | MsG0280011239.01.T02:CDS |
TCCAAACCCAAATTCGTCAC+CGG | 0.582453 | 2:+81364129 | None:intergenic |
ATCCACAAACTGTGGCGGCT+AGG | 0.587768 | 2:-81364062 | MsG0280011239.01.T02:CDS |
AATTGACTGGTTGAAGGAGA+AGG | 0.590555 | 2:+81363846 | None:intergenic |
CAAAGTCAAAGAAACCAAGA+TGG | 0.591227 | 2:-81364296 | MsG0280011239.01.T02:CDS |
GTCAGTGTTACTGTTAGTAG+TGG | 0.594081 | 2:+81364641 | None:intergenic |
CGATATTGACCGAAAGTGAA+GGG | 0.597835 | 2:+81364775 | None:intergenic |
TAGAGCTGCAGCATTTAGGC+CGG | 0.600006 | 2:-81364148 | MsG0280011239.01.T02:CDS |
AAAGTCAAAGAAACCAAGAT+GGG | 0.607623 | 2:-81364295 | MsG0280011239.01.T02:CDS |
GAGAAGGCTATGTTTGTAGG+AGG | 0.619011 | 2:+81363862 | None:intergenic |
CTTTGAAGAGCCTGATCCAG+AGG | 0.622335 | 2:-81364199 | MsG0280011239.01.T02:CDS |
GCCATGTTGAAATCAGGCAG+TGG | 0.628594 | 2:+81364732 | None:intergenic |
TGAGTAGTAATGCTGAAGCA+AGG | 0.639766 | 2:+81364372 | None:intergenic |
TCAAATGCAAGAAATGCAGA+AGG | 0.642036 | 2:-81364850 | MsG0280011239.01.T02:CDS |
AAATTGATATTTGATGAACC+AGG | 0.643576 | 2:+81364261 | None:intergenic |
TTGCAGAAGATTGTTCCTGG+TGG | 0.647074 | 2:-81364003 | MsG0280011239.01.T02:CDS |
ATCAAATGATCCACAAACTG+TGG | 0.655439 | 2:-81364070 | MsG0280011239.01.T02:CDS |
GAAATGCAGAAGGTTCAACC+AGG | 0.659735 | 2:-81364840 | MsG0280011239.01.T02:CDS |
GCGTACAAATGCTAGAAACA+AGG | 0.665015 | 2:-81364520 | MsG0280011239.01.T02:CDS |
AAATGATCCACAAACTGTGG+CGG | 0.666151 | 2:-81364067 | MsG0280011239.01.T02:CDS |
TGTGGCGGCTAGGCAAAGAA+GGG | 0.669512 | 2:-81364052 | MsG0280011239.01.T02:CDS |
GCCACTGCCTGATTTCAACA+TGG | 0.684690 | 2:-81364733 | MsG0280011239.01.T02:CDS |
CTTGTGCTCTAAGAAACTTG+AGG | 0.702293 | 2:+81363935 | None:intergenic |
AGTGGCACATAATTGTCATG+TGG | 0.718463 | 2:+81364750 | None:intergenic |
TGTACGCTCAGATTCACCAG+AGG | 0.725761 | 2:+81364536 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TAAAATCATTGATAATTCCA+AGG | - | Chr2:81364346-81364365 | MsG0280011239.01.T02:CDS | 20.0% |
! | AAATTGATATTTGATGAACC+AGG | + | Chr2:81364521-81364540 | None:intergenic | 25.0% |
! | AATATTGGATGTTGACATTA+GGG | + | Chr2:81364970-81364989 | None:intergenic | 25.0% |
! | AGTTAAAAACACTTGAACTT+GGG | + | Chr2:81363908-81363927 | None:intergenic | 25.0% |
! | TAGTTAAAAACACTTGAACT+TGG | + | Chr2:81363909-81363928 | None:intergenic | 25.0% |
!! | ATCAATATTAGTCCTTTTTG+TGG | + | Chr2:81364378-81364397 | None:intergenic | 25.0% |
!! | ATCTTAACATTCTTCCTTTT+AGG | + | Chr2:81364689-81364708 | None:intergenic | 25.0% |
AAAGTCAAAGAAACCAAGAT+GGG | - | Chr2:81364484-81364503 | MsG0280011239.01.T02:CDS | 30.0% | |
ACTAATTCTGTTCAAGATGA+TGG | - | Chr2:81364161-81364180 | MsG0280011239.01.T02:CDS | 30.0% | |
ACTGCAAAAACAGAAACTTA+TGG | - | Chr2:81364204-81364223 | MsG0280011239.01.T02:CDS | 30.0% | |
GAATATTGGATGTTGACATT+AGG | + | Chr2:81364971-81364990 | None:intergenic | 30.0% | |
GACAATGAAACTGATGAATT+TGG | + | Chr2:81364551-81364570 | None:intergenic | 30.0% | |
TCTTCTTCTTCTACTGAATT+TGG | - | Chr2:81364434-81364453 | MsG0280011239.01.T02:CDS | 30.0% | |
TTTGCAGTCAGAAAAAATCA+TGG | + | Chr2:81364192-81364211 | None:intergenic | 30.0% | |
! | AATGATTTTACCTTGATCTG+AGG | + | Chr2:81364336-81364355 | None:intergenic | 30.0% |
AAAAACACTTGAACTTGGGT+TGG | + | Chr2:81363904-81363923 | None:intergenic | 35.0% | |
AAACTGATGAATTTGGTTGC+TGG | + | Chr2:81364544-81364563 | None:intergenic | 35.0% | |
ATCAAATGATCCACAAACTG+TGG | - | Chr2:81364709-81364728 | MsG0280011239.01.T02:CDS | 35.0% | |
CAAAGTCAAAGAAACCAAGA+TGG | - | Chr2:81364483-81364502 | MsG0280011239.01.T02:CDS | 35.0% | |
TATATAGAGCTGCAGCATTT+AGG | - | Chr2:81364627-81364646 | MsG0280011239.01.T02:CDS | 35.0% | |
TCAAATGCAAGAAATGCAGA+AGG | - | Chr2:81363929-81363948 | MsG0280011239.01.T02:CDS | 35.0% | |
TTACCAACATACCAATCTTG+TGG | - | Chr2:81363838-81363857 | MsG0280011239.01.T02:CDS | 35.0% | |
! | AAGTGATGGAAAAGCCTAAA+AGG | - | Chr2:81364672-81364691 | MsG0280011239.01.T02:CDS | 35.0% |
! | CATCTTGGTTTCTTTGACTT+TGG | + | Chr2:81364485-81364504 | None:intergenic | 35.0% |
! | TTGACATTAGGGTTTTGCAT+GGG | + | Chr2:81364959-81364978 | None:intergenic | 35.0% |
AAATGATCCACAAACTGTGG+CGG | - | Chr2:81364712-81364731 | MsG0280011239.01.T02:CDS | 40.0% | |
AACTTTAGTGCAGTTTCCTC+TGG | - | Chr2:81364227-81364246 | MsG0280011239.01.T02:CDS | 40.0% | |
AAGGAGAAGGCTATGTTTGT+AGG | + | Chr2:81364923-81364942 | None:intergenic | 40.0% | |
AGAGGCAATAGCACAAATGA+AGG | - | Chr2:81364598-81364617 | MsG0280011239.01.T02:CDS | 40.0% | |
AGATGGGATAATAAGTGTCC+TGG | - | Chr2:81364500-81364519 | MsG0280011239.01.T02:CDS | 40.0% | |
AGTGGCACATAATTGTCATG+TGG | + | Chr2:81364032-81364051 | None:intergenic | 40.0% | |
CCAAGGTTCATTCCACAAAA+AGG | - | Chr2:81364363-81364382 | MsG0280011239.01.T02:CDS | 40.0% | |
CCAATCATACCCTTCACTTT+CGG | - | Chr2:81363995-81364014 | MsG0280011239.01.T02:CDS | 40.0% | |
CGATATTGACCGAAAGTGAA+GGG | + | Chr2:81364007-81364026 | None:intergenic | 40.0% | |
GAAGGGAAAGAATAAGTGAG+AGG | - | Chr2:81364744-81364763 | MsG0280011239.01.T02:CDS | 40.0% | |
GCGTACAAATGCTAGAAACA+AGG | - | Chr2:81364259-81364278 | MsG0280011239.01.T02:CDS | 40.0% | |
GGACACTTATTATCCCATCT+TGG | + | Chr2:81364500-81364519 | None:intergenic | 40.0% | |
GTAGTAGTACTCTTGCTGAT+TGG | + | Chr2:81364080-81364099 | None:intergenic | 40.0% | |
GTCAAAGAACTGGAGAATCT+AGG | - | Chr2:81364866-81364885 | MsG0280011239.01.T02:CDS | 40.0% | |
GTTCCACAAGATTGGTATGT+TGG | + | Chr2:81363844-81363863 | None:intergenic | 40.0% | |
TAGAGCACAAGTCAAAGAAC+TGG | - | Chr2:81364856-81364875 | MsG0280011239.01.T02:CDS | 40.0% | |
TAGTCTCTTGCAAAGTCTTG+TGG | + | Chr2:81363873-81363892 | None:intergenic | 40.0% | |
TCGATATTGACCGAAAGTGA+AGG | + | Chr2:81364008-81364027 | None:intergenic | 40.0% | |
TGAGTAGTAATGCTGAAGCA+AGG | + | Chr2:81364410-81364429 | None:intergenic | 40.0% | |
! | AATTGACTGGTTGAAGGAGA+AGG | + | Chr2:81364936-81364955 | None:intergenic | 40.0% |
! | CCTTTTTGTGGAATGAACCT+TGG | + | Chr2:81364366-81364385 | None:intergenic | 40.0% |
! | CTTGGTTTCTTTGACTTTGG+TGG | + | Chr2:81364482-81364501 | None:intergenic | 40.0% |
! | GAATTTGGGTTTGGAAGTGA+TGG | - | Chr2:81364658-81364677 | MsG0280011239.01.T02:CDS | 40.0% |
! | GTCAGTGTTACTGTTAGTAG+TGG | + | Chr2:81364141-81364160 | None:intergenic | 40.0% |
! | GTTGACATTAGGGTTTTGCA+TGG | + | Chr2:81364960-81364979 | None:intergenic | 40.0% |
! | TAGTACTCTTGCTGATTGGT+TGG | + | Chr2:81364076-81364095 | None:intergenic | 40.0% |
! | TTCATTTGTGCTATTGCCTC+TGG | + | Chr2:81364599-81364618 | None:intergenic | 40.0% |
!! | CTTGTGCTCTAAGAAACTTG+AGG | + | Chr2:81364847-81364866 | None:intergenic | 40.0% |
ATTTAGGCCGGTGACGAATT+TGG | - | Chr2:81364643-81364662 | MsG0280011239.01.T02:CDS | 45.0% | |
CATTGATGCAGTGTCCATCT+TGG | + | Chr2:81364804-81364823 | None:intergenic | 45.0% | |
GAAATGCAGAAGGTTCAACC+AGG | - | Chr2:81363939-81363958 | MsG0280011239.01.T02:CDS | 45.0% | |
GAGAAGGCTATGTTTGTAGG+AGG | + | Chr2:81364920-81364939 | None:intergenic | 45.0% | |
GCAGTATGCATTCAAGGAAC+TGG | - | Chr2:81364286-81364305 | MsG0280011239.01.T02:CDS | 45.0% | |
GGACATGCAGTATGCATTCA+AGG | - | Chr2:81364280-81364299 | MsG0280011239.01.T02:CDS | 45.0% | |
GGTTGAGTGTTCCACAAGAT+TGG | + | Chr2:81363852-81363871 | None:intergenic | 45.0% | |
GTCTTGCAGAAGATTGTTCC+TGG | - | Chr2:81364773-81364792 | MsG0280011239.01.T02:CDS | 45.0% | |
TCCAAACCCAAATTCGTCAC+CGG | + | Chr2:81364653-81364672 | None:intergenic | 45.0% | |
TGCATTCAAGGAACTGGATC+AGG | - | Chr2:81364292-81364311 | MsG0280011239.01.T02:CDS | 45.0% | |
TTACCTTGATCTGAGGAAGC+TGG | + | Chr2:81364329-81364348 | None:intergenic | 45.0% | |
TTGCAGAAGATTGTTCCTGG+TGG | - | Chr2:81364776-81364795 | MsG0280011239.01.T02:CDS | 45.0% | |
TTTAGGCCGGTGACGAATTT+GGG | - | Chr2:81364644-81364663 | MsG0280011239.01.T02:CDS | 45.0% | |
! | ACTCTTGCTGATTGGTTGGT+GGG | + | Chr2:81364072-81364091 | None:intergenic | 45.0% |
! | CATGGGAATTGACTGGTTGA+AGG | + | Chr2:81364942-81364961 | None:intergenic | 45.0% |
! | CCGAAAGTGAAGGGTATGAT+TGG | + | Chr2:81363998-81364017 | None:intergenic | 45.0% |
! | GGTTTTGCATGGGAATTGAC+TGG | + | Chr2:81364949-81364968 | None:intergenic | 45.0% |
! | TACTCTTGCTGATTGGTTGG+TGG | + | Chr2:81364073-81364092 | None:intergenic | 45.0% |
AACCAGGAGCTGGAAACAGT+TGG | - | Chr2:81363955-81363974 | MsG0280011239.01.T02:CDS | 50.0% | |
ACCAGGAGCTGGAAACAGTT+GGG | - | Chr2:81363956-81363975 | MsG0280011239.01.T02:CDS | 50.0% | |
CTCTGGATCAGGCTCTTCAA+AGG | + | Chr2:81364582-81364601 | None:intergenic | 50.0% | |
GCCACTGCCTGATTTCAACA+TGG | - | Chr2:81364046-81364065 | MsG0280011239.01.T02:CDS | 50.0% | |
GCCATGTTGAAATCAGGCAG+TGG | + | Chr2:81364050-81364069 | None:intergenic | 50.0% | |
TAGAGCTGCAGCATTTAGGC+CGG | - | Chr2:81364631-81364650 | MsG0280011239.01.T02:CDS | 50.0% | |
TCTCCAGCTTCCTCAGATCA+AGG | - | Chr2:81364323-81364342 | MsG0280011239.01.T02:CDS | 50.0% | |
TGTACGCTCAGATTCACCAG+AGG | + | Chr2:81364246-81364265 | None:intergenic | 50.0% | |
TGTTCCTGGTGGAACCAAGA+TGG | - | Chr2:81364787-81364806 | MsG0280011239.01.T02:CDS | 50.0% | |
! | CTTTGAAGAGCCTGATCCAG+AGG | - | Chr2:81364580-81364599 | MsG0280011239.01.T02:CDS | 50.0% |
! | TGGTGGGCCATGTTGAAATC+AGG | + | Chr2:81364056-81364075 | None:intergenic | 50.0% |
! | TGTGCTATTGCCTCTGGATC+AGG | + | Chr2:81364593-81364612 | None:intergenic | 50.0% |
ATCCACAAACTGTGGCGGCT+AGG | - | Chr2:81364717-81364736 | MsG0280011239.01.T02:CDS | 55.0% | |
CAGAAGGTTCAACCAGGAGC+TGG | - | Chr2:81363945-81363964 | MsG0280011239.01.T02:CDS | 55.0% | |
GTGTCCATCTTGGTTCCACC+AGG | + | Chr2:81364794-81364813 | None:intergenic | 55.0% | |
TCCCAACTGTTTCCAGCTCC+TGG | + | Chr2:81363960-81363979 | None:intergenic | 55.0% | |
TGTGGCGGCTAGGCAAAGAA+GGG | - | Chr2:81364727-81364746 | MsG0280011239.01.T02:CDS | 55.0% | |
! | GCCGGTGACGAATTTGGGTT+TGG | - | Chr2:81364649-81364668 | MsG0280011239.01.T02:CDS | 55.0% |
CTGTGGCGGCTAGGCAAAGA+AGG | - | Chr2:81364726-81364745 | MsG0280011239.01.T02:CDS | 60.0% | |
TGCCTAGCCGCCACAGTTTG+TGG | + | Chr2:81364722-81364741 | None:intergenic | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
Chr2 | gene | 81363801 | 81365000 | 81363801 | ID=MsG0280011239.01;Name=MsG0280011239.01 |
Chr2 | mRNA | 81363801 | 81365000 | 81363801 | ID=MsG0280011239.01.T01;Parent=MsG0280011239.01;Name=MsG0280011239.01.T01;_AED=0.02;_eAED=0.02;_QI=0|0|0|1|0|0|2|0|386 |
Chr2 | exon | 81363801 | 81364471 | 81363801 | ID=MsG0280011239.01.T01:exon:12062;Parent=MsG0280011239.01.T01 |
Chr2 | exon | 81364511 | 81365000 | 81364511 | ID=MsG0280011239.01.T01:exon:12061;Parent=MsG0280011239.01.T01 |
Chr2 | CDS | 81364511 | 81365000 | 81364511 | ID=MsG0280011239.01.T01:cds;Parent=MsG0280011239.01.T01 |
Chr2 | CDS | 81363801 | 81364471 | 81363801 | ID=MsG0280011239.01.T01:cds;Parent=MsG0280011239.01.T01 |
Chr2 | mRNA | 81363801 | 81365000 | 81363801 | ID=MsG0280011239.01.T02;Parent=MsG0280011239.01;Name=MsG0280011239.01.T02;_AED=0.00;_eAED=0.00;_QI=0|-1|0|1|-1|1|1|0|399 |
Chr2 | exon | 81363801 | 81365000 | 81363801 | ID=MsG0280011239.01.T02:exon:12063;Parent=MsG0280011239.01.T02 |
Chr2 | CDS | 81363801 | 81365000 | 81363801 | ID=MsG0280011239.01.T02:cds;Parent=MsG0280011239.01.T02 |
Chr2 | mRNA | 81363801 | 81364187 | 81363801 | ID=MsG0280011239.01.T03;Parent=MsG0280011239.01;Name=MsG0280011239.01.T03;_AED=0.35;_eAED=0.35;_QI=0|-1|0|1|-1|0|1|0|128 |
Chr2 | exon | 81363801 | 81364187 | 81363801 | ID=MsG0280011239.01.T03:exon:12064;Parent=MsG0280011239.01.T03 |
Chr2 | CDS | 81363801 | 81364187 | 81363801 | ID=MsG0280011239.01.T03:cds;Parent=MsG0280011239.01.T03 |
Chr2 | mRNA | 81363801 | 81364124 | 81363801 | ID=MsG0280011239.01.T04;Parent=MsG0280011239.01;Name=MsG0280011239.01.T04;_AED=0.38;_eAED=0.38;_QI=0|-1|0|1|-1|0|1|0|107 |
Chr2 | exon | 81363801 | 81364124 | 81363801 | ID=MsG0280011239.01.T04:exon:12065;Parent=MsG0280011239.01.T04 |
Chr2 | CDS | 81363801 | 81364124 | 81363801 | ID=MsG0280011239.01.T04:cds;Parent=MsG0280011239.01.T04 |
Chr2 | mRNA | 81363801 | 81363995 | 81363801 | ID=MsG0280011239.01.T05;Parent=MsG0280011239.01;Name=MsG0280011239.01.T05;_AED=0.44;_eAED=0.44;_QI=0|-1|0|1|-1|0|1|0|64 |
Chr2 | exon | 81363801 | 81363995 | 81363801 | ID=MsG0280011239.01.T05:exon:12066;Parent=MsG0280011239.01.T05 |
Chr2 | CDS | 81363801 | 81363995 | 81363801 | ID=MsG0280011239.01.T05:cds;Parent=MsG0280011239.01.T05 |
Gene Sequence |
Protein sequence |