AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0380011528.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380011528.01.T01 MTR_3g006010 92.964 469 33 0 1 469 1 469 0.0 877
MsG0380011528.01.T01 MTR_3g006100 85.511 352 51 0 118 469 1 352 0.0 629
MsG0380011528.01.T01 MTR_3g006120 85.511 352 51 0 118 469 1 352 0.0 628
MsG0380011528.01.T01 MTR_3g006180 84.570 337 52 0 131 467 1 337 0.0 590
MsG0380011528.01.T01 MTR_3g006140 68.466 352 111 0 114 465 19 370 0.0 513
MsG0380011528.01.T01 MTR_4g133490 68.497 346 107 2 121 466 2 345 9.87e-164 466
MsG0380011528.01.T01 MTR_6g091830 47.303 482 208 10 1 466 1 452 7.47e-143 417
MsG0380011528.01.T01 MTR_6g092140 47.095 482 209 10 1 466 1 452 1.73e-141 414
MsG0380011528.01.T01 MTR_4g133320 67.846 311 88 2 161 466 2 305 7.78e-140 404
MsG0380011528.01.T01 MTR_3g068220 57.263 358 140 4 118 466 1 354 1.39e-132 387
MsG0380011528.01.T01 MTR_3g045700 57.224 353 141 5 118 466 1 347 1.85e-128 376
MsG0380011528.01.T01 MTR_7g083950 48.701 462 183 10 11 466 16 429 2.86e-128 379
MsG0380011528.01.T01 MTR_7g070100 55.814 344 148 4 124 466 7 347 5.40e-121 357
MsG0380011528.01.T01 MTR_6g088340 42.050 478 201 10 6 466 12 430 2.21e-112 338
MsG0380011528.01.T01 MTR_1g100280 51.420 352 135 6 121 466 13 334 1.03e-106 320
MsG0380011528.01.T01 MTR_6g011110 56.884 276 107 3 200 466 2 274 1.14e-99 300
MsG0380011528.01.T01 MTR_1g109340 59.524 252 94 3 219 466 105 352 5.55e-92 283
MsG0380011528.01.T01 MTR_1g109340 29.054 148 53 4 8 155 10 105 1.30e-11 66.2
MsG0380011528.01.T01 MTR_3g085910 47.352 321 110 4 123 433 5 276 7.69e-92 280
MsG0380011528.01.T01 MTR_3g086480 58.984 256 99 4 207 461 3 253 1.68e-87 268
MsG0380011528.01.T01 MTR_1g109520 60.131 153 57 1 318 466 22 174 5.26e-55 181
MsG0380011528.01.T01 MTR_1g089085 53.020 149 65 3 113 260 31 175 3.91e-44 153
MsG0380011528.01.T01 MTR_1g089620 58.209 134 53 1 292 425 30 160 2.63e-42 152
MsG0380011528.01.T01 MTR_1g012330 65.833 120 41 0 200 319 2 121 5.91e-42 150
MsG0380011528.01.T01 MTR_3g006105 74.490 98 24 1 1 97 1 98 1.16e-41 147
MsG0380011528.01.T01 MTR_3g006105 38.739 111 38 1 4 114 95 175 7.41e-12 64.3
MsG0380011528.01.T01 MTR_3g006125 77.320 97 21 1 1 96 82 178 1.23e-37 138
MsG0380011528.01.T01 MTR_3g006125 41.071 112 36 1 4 115 176 257 1.76e-14 73.6
MsG0380011528.01.T01 MTR_3g006185 75.258 97 24 0 1 97 1 97 2.45e-36 132
MsG0380011528.01.T01 MTR_3g006185 41.964 112 35 1 4 115 94 175 4.24e-16 76.6
MsG0380011528.01.T01 MTR_1g109090 48.551 138 70 1 109 245 4 141 5.06e-35 128
MsG0380011528.01.T01 MTR_1g106050 53.271 107 48 1 121 225 2 108 9.01e-30 113
MsG0380011528.01.T01 MTR_3g006150 61.798 89 30 1 1 89 1 85 2.30e-27 107
MsG0380011528.01.T01 MTR_3g006150 49.315 73 37 0 2 74 84 156 1.30e-13 68.9
MsG0380011528.01.T01 MTR_0128s0040 42.537 134 75 2 150 283 3 134 3.49e-27 106
MsG0380011528.01.T01 MTR_6g023220 27.458 295 206 5 130 422 22 310 1.15e-26 110
MsG0380011528.01.T01 MTR_1g093300 53.398 103 48 0 293 395 1 103 4.04e-26 103
MsG0380011528.01.T01 MTR_3g006065 59.551 89 32 1 1 89 1 85 6.03e-25 102
MsG0380011528.01.T01 MTR_3g006065 49.315 73 37 0 2 74 84 156 1.12e-13 69.7
MsG0380011528.01.T01 MTR_6g091850 44.330 97 48 2 375 465 1 97 1.91e-22 92.0
MsG0380011528.01.T01 MTR_1g104940 52.809 89 39 2 3 91 9 94 5.23e-21 89.0
MsG0380011528.01.T01 MTR_1g104960 53.846 78 35 1 6 83 11 87 3.57e-18 82.4
MsG0380011528.01.T01 MTR_1g104960 45.455 77 41 1 7 83 98 173 7.51e-13 67.0
MsG0380011528.01.T01 MTR_1g104937 46.512 86 43 2 6 91 10 92 3.56e-16 74.7
MsG0380011528.01.T01 MTR_8g062700 52.500 80 37 1 2 81 36 114 6.97e-16 81.3
MsG0380011528.01.T01 MTR_8g062700 52.500 80 37 1 2 81 36 114 7.22e-16 81.3
MsG0380011528.01.T01 MTR_5g036670 53.247 77 35 1 2 78 37 112 1.16e-15 80.5
MsG0380011528.01.T01 MTR_1g105010 40.449 89 52 1 2 90 10 97 2.38e-15 72.8
MsG0380011528.01.T01 MTR_1g105955 50.704 71 34 1 6 76 93 162 5.35e-14 70.5
MsG0380011528.01.T01 MTR_1g105960 47.561 82 41 2 9 90 2 81 6.73e-14 68.2
MsG0380011528.01.T01 MTR_6g008970 45.783 83 44 1 2 84 57 138 2.21e-13 73.2
MsG0380011528.01.T01 MTR_4g133470 37.209 129 71 3 7 135 11 129 3.24e-13 69.7
MsG0380011528.01.T01 MTR_4g133300 36.923 130 72 3 6 135 10 129 1.03e-12 68.6
MsG0380011528.01.T01 MTR_8g062350 48.052 77 39 1 2 78 8 83 1.10e-12 67.4
MsG0380011528.01.T01 MTR_1g104980 44.828 87 46 2 14 100 76 160 1.27e-12 66.6
MsG0380011528.01.T01 MTR_1g104980 50.000 56 28 0 23 78 13 68 5.07e-11 62.0
MsG0380011528.01.T01 MTR_2g097830 40.625 96 52 2 6 101 68 158 1.78e-12 65.9
MsG0380011528.01.T01 MTR_7g013380 41.558 77 44 1 8 83 185 261 4.04e-12 67.4
MsG0380011528.01.T01 MTR_3g006000 49.296 71 34 2 5 74 4 73 8.49e-12 61.2
MsG0380011528.01.T01 MTR_6g008995 43.750 80 44 1 2 81 31 109 2.12e-11 66.2
MsG0380011528.01.T01 MTR_1g091047 47.297 74 36 3 1 72 1 73 3.43e-11 59.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380011528.01.T01 AT5G15025 48.235 85 39 2 4 88 43 122 1.72e-16 76.3
MsG0380011528.01.T01 AT1G70060 48.837 86 40 2 2 87 8 89 5.20e-15 78.6
MsG0380011528.01.T01 AT1G70060 48.837 86 40 2 2 87 8 89 5.20e-15 78.6
MsG0380011528.01.T01 AT1G24190 46.753 77 40 1 2 78 8 83 1.75e-13 73.6
MsG0380011528.01.T01 AT3G01320 48.193 83 41 2 2 84 51 131 1.86e-13 73.6
MsG0380011528.01.T01 AT3G01320 48.193 83 41 2 2 84 51 131 1.89e-13 73.6
MsG0380011528.01.T01 AT1G24190 46.753 77 40 1 2 78 8 83 1.91e-13 73.6
MsG0380011528.01.T01 AT1G24190 46.753 77 40 1 2 78 8 83 1.91e-13 73.6
MsG0380011528.01.T01 AT1G59890 50.704 71 34 1 8 78 45 114 1.30e-12 70.9
MsG0380011528.01.T01 AT1G59890 50.704 71 34 1 8 78 45 114 1.31e-12 70.9
MsG0380011528.01.T01 AT1G59890 50.704 71 34 1 8 78 45 114 1.39e-12 70.9
MsG0380011528.01.T01 AT1G59890 50.704 71 34 1 8 78 45 114 1.43e-12 70.9
MsG0380011528.01.T01 AT5G15020 46.753 77 40 1 2 78 46 121 2.16e-12 70.1
MsG0380011528.01.T01 AT5G15020 46.753 77 40 1 2 78 46 121 2.27e-12 70.1
MsG0380011528.01.T01 AT1G24200 48.611 72 36 1 5 76 11 81 6.42e-12 65.1
MsG0380011528.01.T01 AT1G70030 43.210 81 45 1 2 82 16 95 8.10e-12 62.8
MsG0380011528.01.T01 AT1G24230 44.928 69 38 0 5 73 11 79 2.85e-11 63.9
MsG0380011528.01.T01 AT1G70030 43.210 81 45 1 2 82 16 95 2.93e-11 61.6
MsG0380011528.01.T01 AT1G10450 49.296 71 35 1 8 78 84 153 3.08e-11 66.6
MsG0380011528.01.T01 AT1G10450 49.296 71 35 1 8 78 33 102 3.32e-11 66.2
MsG0380011528.01.T01 AT1G10450 49.296 71 35 1 8 78 33 102 3.32e-11 66.2
MsG0380011528.01.T01 AT1G70030 43.210 81 45 1 2 82 5 84 4.22e-11 61.6

Find 90 sgRNAs with CRISPR-Local

Find 236 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCTGGTACTTAGCCTATTT+TGG 0.108241 3:-971098 MsG0380011528.01.T01:CDS
ACCTTCTTTCTTCTTGTAAA+TGG 0.145840 3:+971017 None:intergenic
CTATCATGCTTAATGTATTT+TGG 0.196702 3:+970408 None:intergenic
ATATGTAGAATTGACTTTAA+AGG 0.213151 3:+970980 None:intergenic
TACCATGTCTTACTTGCTTT+TGG 0.226717 3:-970951 MsG0380011528.01.T01:CDS
GTCTATCAGTCTCGAAATTT+AGG 0.258049 3:-970870 MsG0380011528.01.T01:CDS
ATTATCTTCTATGTTATTCA+TGG 0.297170 3:+971355 None:intergenic
GGGAGTTTCATAAAACTTAC+TGG 0.299093 3:-971241 MsG0380011528.01.T01:CDS
ACAACATGTAAAGTGTGTTT+AGG 0.310726 3:-970447 MsG0380011528.01.T01:CDS
ATCTCAAAATTAAATCTTCA+TGG 0.311366 3:+973934 None:intergenic
TCAAGAATATCCCAGGAAAA+TGG 0.316158 3:+971329 None:intergenic
GTCGCTTCATGTAAAAGTTC+TGG 0.324062 3:-970903 MsG0380011528.01.T01:CDS
CTCTCCCTTGACGATGCATT+AGG 0.326781 3:-974098 MsG0380011528.01.T01:CDS
CAACATGTAAAGTGTGTTTA+GGG 0.332853 3:-970446 MsG0380011528.01.T01:CDS
TTCCAGCTTGACATAATTCA+TGG 0.341057 3:+970584 None:intergenic
TTTAATAACTAATGGTTCTT+GGG 0.345665 3:+971202 None:intergenic
CAATAACCATGTTACTCATT+TGG 0.348533 3:+970306 None:intergenic
TTTCTTGCGTGTGCAAGAAT+TGG 0.355227 3:-971265 MsG0380011528.01.T01:CDS
CGAAGACGATCAATCAATTC+TGG 0.363197 3:-971115 MsG0380011528.01.T01:CDS
TCTCCCTTGACGATGCATTA+GGG 0.366688 3:-974097 MsG0380011528.01.T01:CDS
TCCGCTAGAACATCCAAAAT+AGG 0.373337 3:+971085 None:intergenic
ATTAAGAGTGTACGAGTTGT+TGG 0.382597 3:-973961 MsG0380011528.01.T01:CDS
AAAGGAAAATGCCTACTTGC+TGG 0.383831 3:-970370 MsG0380011528.01.T01:CDS
GTACGTTTGGATATGAGAAA+AGG 0.418589 3:-974055 MsG0380011528.01.T01:CDS
TTTCAAAACCCCACCTCCTC+GGG 0.423293 3:+970502 None:intergenic
TACATTAAGCATGATAGAAC+TGG 0.424208 3:-970402 MsG0380011528.01.T01:CDS
TGGGTTACATATTTAACAAT+GGG 0.431533 3:-970846 MsG0380011528.01.T01:CDS
TCAGCATTAAAATGTACGTT+TGG 0.431544 3:-974068 MsG0380011528.01.T01:CDS
AGGAAAAGAATTTCTTATCA+TGG 0.433315 3:+971171 None:intergenic
CTTTCAAAACCCCACCTCCT+CGG 0.433713 3:+970501 None:intergenic
TAAACACACTTTACATGTTG+TGG 0.439177 3:+970449 None:intergenic
TTATGTCAAGCTGGAAACTT+TGG 0.444741 3:-970577 MsG0380011528.01.T01:CDS
AGTTTGATTTCATATTTAGT+TGG 0.445957 3:+973897 None:intergenic
TACGTTTGGATATGAGAAAA+GGG 0.447772 3:-974054 MsG0380011528.01.T01:CDS
TATGTCAAGCTGGAAACTTT+GGG 0.448977 3:-970576 MsG0380011528.01.T01:CDS
CTAAGGTTGGTTTGCTGTGA+TGG 0.466197 3:-970672 MsG0380011528.01.T01:CDS
TTCATATTTAGTTGGCAAGA+AGG 0.469109 3:+973905 None:intergenic
ATCAGTCTCGAAATTTAGGT+TGG 0.469659 3:-970866 MsG0380011528.01.T01:CDS
CATTGAGCAACCCGAGGAGG+TGG 0.479312 3:-970512 MsG0380011528.01.T01:CDS
ATATGAAATCAAACTTCCAT+TGG 0.479714 3:-973889 MsG0380011528.01.T01:CDS
AGCGGATATTTGATCATGAA+AGG 0.482955 3:-971068 MsG0380011528.01.T01:CDS
TCAGTCTCGAAATTTAGGTT+GGG 0.489379 3:-970865 MsG0380011528.01.T01:CDS
AAAATGCCTACTTGCTGGAT+TGG 0.490737 3:-970365 MsG0380011528.01.T01:CDS
GTAAACATTCAATATTTCCT+CGG 0.492474 3:+970623 None:intergenic
ACAAAGTCAACAACCTTCCA+TGG 0.493618 3:+970819 None:intergenic
CAAGTTGAGTACACCTATGA+TGG 0.493731 3:+970758 None:intergenic
CTTGCGTGTGCAAGAATTGG+AGG 0.496446 3:-971262 MsG0380011528.01.T01:CDS
TCCATTTACAAGAAGAAAGA+AGG 0.500617 3:-971018 MsG0380011528.01.T01:CDS
GCGGATATTTGATCATGAAA+GGG 0.505605 3:-971067 MsG0380011528.01.T01:CDS
AACCATGAATTATGTCAAGC+TGG 0.505920 3:-970586 MsG0380011528.01.T01:CDS
TCGGTCAGCTATGCTGATGA+AGG 0.509137 3:+971151 None:intergenic
GTCACCAACGAGGCCATCAT+AGG 0.512536 3:-970771 MsG0380011528.01.T01:CDS
ACAAATTATGAAGGATTACA+AGG 0.516015 3:-974012 MsG0380011528.01.T01:CDS
AATCACACCTTCAGTTCAGC+TGG 0.522086 3:-973793 MsG0380011528.01.T01:CDS
CATCACAGCAAACCAACCTT+AGG 0.526937 3:+970673 None:intergenic
TTGGGTTACATATTTAACAA+TGG 0.536465 3:-970847 MsG0380011528.01.T01:CDS
GGCTGAAAGAATTGATGCTA+GGG 0.536935 3:-973991 MsG0380011528.01.T01:CDS
AGGCTGAAAGAATTGATGCT+AGG 0.540522 3:-973992 MsG0380011528.01.T01:CDS
GGAAATATTGAATGTTTACA+AGG 0.540759 3:-970619 MsG0380011528.01.T01:CDS
TGTTGTGGATGAAAGATTGA+TGG 0.544678 3:+970464 None:intergenic
ATTTAACAATGGGAAATCCA+TGG 0.556723 3:-970836 MsG0380011528.01.T01:CDS
CTTTAGACATCAACGATATG+AGG 0.560266 3:-970340 MsG0380011528.01.T01:CDS
ATTGAGCAACCCGAGGAGGT+GGG 0.576609 3:-970511 MsG0380011528.01.T01:CDS
AATGACATCAAGAATATCCC+AGG 0.580432 3:+971322 None:intergenic
AGTGGTTCATATTGAGTCCG+AGG 0.581618 3:-970640 MsG0380011528.01.T01:CDS
CCAGTGTCCAGCTGAACTGA+AGG 0.581775 3:+973786 None:intergenic
CCTTCAGTTCAGCTGGACAC+TGG 0.584057 3:-973786 MsG0380011528.01.T01:intron
TCATCGTCATCACGATCCAA+TGG 0.590882 3:+973873 None:intergenic
TAACATCTACGTCACACCTA+AGG 0.591743 3:-970689 MsG0380011528.01.T01:CDS
TTGCGTGTGCAAGAATTGGA+GGG 0.591841 3:-971261 MsG0380011528.01.T01:CDS
AACAATGGGAAATCCATGGA+AGG 0.592110 3:-970832 MsG0380011528.01.T01:CDS
ACACGCAAGAAAATTGAAAG+AGG 0.594871 3:+971276 None:intergenic
TGTGACGTAGATGTTACATC+GGG 0.598252 3:+970696 None:intergenic
TTGAGCAACCCGAGGAGGTG+GGG 0.604707 3:-970510 MsG0380011528.01.T01:CDS
TAACCCTAATGCATCGTCAA+GGG 0.606424 3:+974094 None:intergenic
ATCTACGTCACACCTAAGGT+TGG 0.610481 3:-970685 MsG0380011528.01.T01:CDS
TACACCTATGATGGCCTCGT+TGG 0.610836 3:+970767 None:intergenic
TAGACATCAACGATATGAGG+TGG 0.615065 3:-970337 MsG0380011528.01.T01:CDS
AAAGCACCAATCCAGCAAGT+AGG 0.620337 3:+970359 None:intergenic
CGGATATTTGATCATGAAAG+GGG 0.623275 3:-971066 MsG0380011528.01.T01:CDS
GTGTGACGTAGATGTTACAT+CGG 0.623306 3:+970695 None:intergenic
TTAACCCTAATGCATCGTCA+AGG 0.624879 3:+974093 None:intergenic
AGAGTGTACGAGTTGTTGGA+CGG 0.625456 3:-973957 MsG0380011528.01.T01:CDS
TAGAACTGGAGTTCCTCCAA+AGG 0.630462 3:-970388 MsG0380011528.01.T01:CDS
TGCCAAAAGCAAGTAAGACA+TGG 0.647599 3:+970949 None:intergenic
ATGCATTGAGCAACCCGAGG+AGG 0.674436 3:-970515 MsG0380011528.01.T01:CDS
AACATGTAAAGTGTGTTTAG+GGG 0.701783 3:-970445 MsG0380011528.01.T01:CDS
GACGATGATGAAGAACAAGA+TGG 0.708057 3:-973858 MsG0380011528.01.T01:CDS
TCTATGCATTGAGCAACCCG+AGG 0.716401 3:-970518 MsG0380011528.01.T01:CDS
TATATATGTTGTCACCAACG+AGG 0.759362 3:-970781 MsG0380011528.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATAAAATTATTTATATTTTT+AGG - Chr3:971816-971835 MsG0380011528.01.T01:intron 0.0%
!! ATTGAAATTTAATAATAGAA+AGG - Chr3:970977-970996 MsG0380011528.01.T01:CDS 10.0%
!!! AATGTTTACAAAATATTTTT+TGG + Chr3:971211-971230 None:intergenic 10.0%
!!! TCTTTATCTTATTATTTTTA+AGG - Chr3:972543-972562 MsG0380011528.01.T01:intron 10.0%
!!! TTCTAAAAAATTTATATTTG+AGG + Chr3:973696-973715 None:intergenic 10.0%
!! AAATCATTTCATATTGAAAT+TGG - Chr3:972701-972720 MsG0380011528.01.T01:intron 15.0%
!! CAAATATTCTACATATTATA+AGG - Chr3:972768-972787 MsG0380011528.01.T01:intron 15.0%
!!! AAATATACAAAATTTGGTTT+TGG + Chr3:972846-972865 None:intergenic 15.0%
!!! AAATATAGAATAATTGGTTT+TGG - Chr3:972650-972669 MsG0380011528.01.T01:intron 15.0%
!!! AACCAAAAAAATATTTTTAC+AGG - Chr3:972877-972896 MsG0380011528.01.T01:intron 15.0%
!!! AACCAAAAAAATATTTTTAC+AGG + Chr3:972896-972877 None:intergenic 15.0%
!!! ACCAAAAAAATATTTTTACA+GGG - Chr3:972878-972897 MsG0380011528.01.T01:intron 15.0%
!!! ACCAAAAAAATATTTTTACA+GGG + Chr3:972897-972878 None:intergenic 15.0%
!!! TAAGACTTTTTAATAACTAA+TGG + Chr3:973233-973252 None:intergenic 15.0%
!!! TATATAAAGTGTCAATAAAT+TGG - Chr3:970801-970820 MsG0380011528.01.T01:CDS 15.0%
!!! TTATTTTTAAGGCTTAAATA+TGG - Chr3:972554-972573 MsG0380011528.01.T01:intron 15.0%
!!! TTTACAAAATATTTTTTGGA+TGG + Chr3:971207-971226 None:intergenic 15.0%
!! AACTATTCACATTAAAATGT+TGG - Chr3:972480-972499 MsG0380011528.01.T01:intron 20.0%
!! AGATAAAATAGATAATCCTA+TGG + Chr3:971289-971308 None:intergenic 20.0%
!! AGGACTAAAATGAATATTAT+AGG + Chr3:972729-972748 None:intergenic 20.0%
!! AGTACTAAAAAAATGATTAG+GGG - Chr3:971442-971461 MsG0380011528.01.T01:intron 20.0%
!! ATCTCAAAATTAAATCTTCA+TGG + Chr3:970493-970512 None:intergenic 20.0%
!! ATTATATTCCCAAAGAAAAA+TGG + Chr3:972509-972528 None:intergenic 20.0%
!! ATTATCTTCTATGTTATTCA+TGG + Chr3:973072-973091 None:intergenic 20.0%
!! GAGTACTAAAAAAATGATTA+GGG - Chr3:971441-971460 MsG0380011528.01.T01:intron 20.0%
!! GGACTAAAATGAATATTATA+GGG + Chr3:972728-972747 None:intergenic 20.0%
!! TTTAATAACTAATGGTTCTT+GGG + Chr3:973225-973244 None:intergenic 20.0%
!!! AAATTGATTCATATTGGATT+TGG + Chr3:972795-972814 None:intergenic 20.0%
!!! ACCAAATTTTGTATATTTTC+AGG - Chr3:972848-972867 MsG0380011528.01.T01:intron 20.0%
!!! AGTTTGATTTCATATTTAGT+TGG + Chr3:970530-970549 None:intergenic 20.0%
!!! ATAGTTTATTATCCCATTTT+CGG + Chr3:972466-972485 None:intergenic 20.0%
!!! ATATGTAGAATTGACTTTAA+AGG + Chr3:973447-973466 None:intergenic 20.0%
!!! ATATTTTTAGGCAAATTCTA+TGG - Chr3:971828-971847 MsG0380011528.01.T01:intron 20.0%
!!! ATCTTTTCTACAAATTATGA+AGG - Chr3:970403-970422 MsG0380011528.01.T01:CDS 20.0%
!!! ATTTTTCTTTGGGAATATAA+TGG - Chr3:972508-972527 MsG0380011528.01.T01:intron 20.0%
!!! CAATATGAAATGATTTTACA+AGG + Chr3:972697-972716 None:intergenic 20.0%
!!! CAATATGAATCAATTTTACA+AGG - Chr3:972799-972818 MsG0380011528.01.T01:intron 20.0%
!!! CCAAATTTTGTATATTTTCA+GGG - Chr3:972849-972868 MsG0380011528.01.T01:intron 20.0%
!!! CTCATATGCTATTTATTTTT+AGG - Chr3:971639-971658 MsG0380011528.01.T01:intron 20.0%
!!! CTTGTAAAATTGATTCATAT+TGG + Chr3:972801-972820 None:intergenic 20.0%
!!! TCCCTGTAAAAATATTTTTT+TGG - Chr3:972614-972633 MsG0380011528.01.T01:intron 20.0%
!!! TCCCTGTAAAAATATTTTTT+TGG + Chr3:972633-972614 None:intergenic 20.0%
!!! TTATTTTTAGGCAAATTCTA+TGG - Chr3:971651-971670 MsG0380011528.01.T01:intron 20.0%
!!! TTTTAATAACTAATGGTTCT+TGG + Chr3:973226-973245 None:intergenic 20.0%
!!! TTTTTCTTTGGGAATATAAT+GGG - Chr3:972509-972528 MsG0380011528.01.T01:intron 20.0%
! AACTTACTGGAAAAAATTCT+TGG - Chr3:973196-973215 MsG0380011528.01.T01:intron 25.0%
! AATATTTCTTTCCACCTATT+CGG - Chr3:972311-972330 MsG0380011528.01.T01:intron 25.0%
! ACAAATTATGAAGGATTACA+AGG - Chr3:970412-970431 MsG0380011528.01.T01:CDS 25.0%
! ACCAATTATTCTATATTTGC+AGG + Chr3:972648-972667 None:intergenic 25.0%
! AGGAAAAGAATTTCTTATCA+TGG + Chr3:973256-973275 None:intergenic 25.0%
! AGGATTAAAACAAAATACGA+AGG + Chr3:972677-972696 None:intergenic 25.0%
! ATATGAAATCAAACTTCCAT+TGG - Chr3:970535-970554 MsG0380011528.01.T01:CDS 25.0%
! ATGGTACACTCAATATATTT+AGG - Chr3:971670-971689 MsG0380011528.01.T01:intron 25.0%
! ATGTTTCAATTGCTATACAT+TGG - Chr3:972433-972452 MsG0380011528.01.T01:intron 25.0%
! ATTTAATTCCAAAGTTTCAG+AGG + Chr3:971525-971544 None:intergenic 25.0%
! CCAATTATTCTATATTTGCA+GGG + Chr3:972647-972666 None:intergenic 25.0%
! CCCTGAAAATATACAAAATT+TGG + Chr3:972852-972871 None:intergenic 25.0%
! GGAAATATTGAATGTTTACA+AGG - Chr3:973805-973824 MsG0380011528.01.T01:CDS 25.0%
! GTAAACATTCAATATTTCCT+CGG + Chr3:973804-973823 None:intergenic 25.0%
! TACACTTTCAATAGCAATAT+AGG + Chr3:972251-972270 None:intergenic 25.0%
! TGATAGATTATAGCAAAAAG+CGG + Chr3:970763-970782 None:intergenic 25.0%
! TGGGTTACATATTTAACAAT+GGG - Chr3:973578-973597 MsG0380011528.01.T01:intron 25.0%
! TGTATACTGTCACTAAAAAT+AGG + Chr3:972953-972972 None:intergenic 25.0%
! TTAAGGCTTAAATATGGAAA+TGG - Chr3:972560-972579 MsG0380011528.01.T01:intron 25.0%
! TTGGGTTACATATTTAACAA+TGG - Chr3:973577-973596 MsG0380011528.01.T01:intron 25.0%
!! ATCTTTGGAGAATTAAAAGT+AGG - Chr3:971089-971108 MsG0380011528.01.T01:CDS 25.0%
!! CTATCATGCTTAATGTATTT+TGG + Chr3:974019-974038 None:intergenic 25.0%
!! GCATTTTATTGTTCTAACTA+AGG - Chr3:971470-971489 MsG0380011528.01.T01:intron 25.0%
!! GGAGTACTAAAAAAATGATT+AGG - Chr3:971440-971459 MsG0380011528.01.T01:intron 25.0%
!! TAGTTGATGTAACAAAGATA+TGG - Chr3:971404-971423 MsG0380011528.01.T01:intron 25.0%
!! TAGTTTATTATCCCATTTTC+GGG + Chr3:972465-972484 None:intergenic 25.0%
!! TCTTTGGAGAATTAAAAGTA+GGG - Chr3:971090-971109 MsG0380011528.01.T01:CDS 25.0%
!! TTCATGCATTTTATGTCTAT+AGG - Chr3:971121-971140 MsG0380011528.01.T01:CDS 25.0%
!!! ACAAGTTGATGTTATATCTT+TGG - Chr3:971074-971093 MsG0380011528.01.T01:CDS 25.0%
AAACTTTGTGATCAAATCTC+GGG - Chr3:971013-971032 MsG0380011528.01.T01:CDS 30.0%
AACATGTAAAGTGTGTTTAG+GGG - Chr3:973979-973998 MsG0380011528.01.T01:CDS 30.0%
AATATAGGAGGGAATTTCTA+CGG + Chr3:972236-972255 None:intergenic 30.0%
AATTTAAAGAGTGAGTGTAC+CGG + Chr3:971700-971719 None:intergenic 30.0%
ACAACATGTAAAGTGTGTTT+AGG - Chr3:973977-973996 MsG0380011528.01.T01:CDS 30.0%
ACACATGTCAAGTAGAATAA+TGG + Chr3:970675-970694 None:intergenic 30.0%
ACCTTCTTTCTTCTTGTAAA+TGG + Chr3:973410-973429 None:intergenic 30.0%
ACTTTCAATAGCAATATAGG+AGG + Chr3:972248-972267 None:intergenic 30.0%
AGAAGTGAGTGTAAGATTAA+GGG - Chr3:970844-970863 MsG0380011528.01.T01:CDS 30.0%
AGGACTAAAACAAAATACCA+AGG - Chr3:972819-972838 MsG0380011528.01.T01:intron 30.0%
ATATGACATTGATCAACCAT+AGG - Chr3:971270-971289 MsG0380011528.01.T01:CDS 30.0%
ATCAACTAAAAAACACACAG+TGG + Chr3:971392-971411 None:intergenic 30.0%
ATGTCAAGTAGAATAATGGT+AGG + Chr3:970671-970690 None:intergenic 30.0%
ATTTAACAATGGGAAATCCA+TGG - Chr3:973588-973607 MsG0380011528.01.T01:intron 30.0%
CAAAATGTCAGATATTTGCA+GGG - Chr3:972909-972928 MsG0380011528.01.T01:intron 30.0%
CAAACTTTGTGATCAAATCT+CGG - Chr3:971012-971031 MsG0380011528.01.T01:CDS 30.0%
CAACATGTAAAGTGTGTTTA+GGG - Chr3:973978-973997 MsG0380011528.01.T01:CDS 30.0%
CCCTGCAAATATAGAATAAT+TGG - Chr3:972644-972663 MsG0380011528.01.T01:intron 30.0%
CTCATAGTTTAACGATAAGT+TGG - Chr3:970903-970922 MsG0380011528.01.T01:CDS 30.0%
CTTTCAATAGCAATATAGGA+GGG + Chr3:972247-972266 None:intergenic 30.0%
TAAACACACTTTACATGTTG+TGG + Chr3:973978-973997 None:intergenic 30.0%
TACATTAAGCATGATAGAAC+TGG - Chr3:974022-974041 MsG0380011528.01.T01:CDS 30.0%
TACGTTTGGATATGAGAAAA+GGG - Chr3:970370-970389 MsG0380011528.01.T01:CDS 30.0%
TCAGCATTAAAATGTACGTT+TGG - Chr3:970356-970375 MsG0380011528.01.T01:CDS 30.0%
TCCATTTACAAGAAGAAAGA+AGG - Chr3:973406-973425 MsG0380011528.01.T01:intron 30.0%
TGAATGTTCTCAATTATGAG+TGG + Chr3:972023-972042 None:intergenic 30.0%
TGATGTAACAAAGATATGGA+AGG - Chr3:971408-971427 MsG0380011528.01.T01:intron 30.0%
TTAGGGGAAATCTTGTAAAT+TGG - Chr3:970942-970961 MsG0380011528.01.T01:CDS 30.0%
TTCATATTTAGTTGGCAAGA+AGG + Chr3:970522-970541 None:intergenic 30.0%
TTCTCTCAATACAATAACGA+TGG + Chr3:970828-970847 None:intergenic 30.0%
! AAATTATGAAGCAAGAGTAC+CGG - Chr3:972188-972207 MsG0380011528.01.T01:intron 30.0%
! AAGATAATTGTCCATTTTCC+TGG - Chr3:973084-973103 MsG0380011528.01.T01:intron 30.0%
! AGATAATTGTCCATTTTCCT+GGG - Chr3:973085-973104 MsG0380011528.01.T01:intron 30.0%
! AGATATGGAAGGTATATCTT+TGG - Chr3:971419-971438 MsG0380011528.01.T01:intron 30.0%
! ATAATAGAAAGGTACACGAT+TGG - Chr3:970988-971007 MsG0380011528.01.T01:CDS 30.0%
! CTTTGGAGAATTAAAAGTAG+GGG - Chr3:971091-971110 MsG0380011528.01.T01:CDS 30.0%
! TCTTCGAGTGATAAACTTTT+CGG + Chr3:973295-973314 None:intergenic 30.0%
!! AGTTTAACGATAAGTTGGTA+GGG - Chr3:970908-970927 MsG0380011528.01.T01:CDS 30.0%
!! TAGTTTAACGATAAGTTGGT+AGG - Chr3:970907-970926 MsG0380011528.01.T01:CDS 30.0%
!!! ATTGCCTTATTTTATGCTTC+GGG - Chr3:973875-973894 MsG0380011528.01.T01:CDS 30.0%
!!! CATTGCCTTATTTTATGCTT+CGG - Chr3:973874-973893 MsG0380011528.01.T01:CDS 30.0%
!!! CATTTTAGTCCTTGTTTTGA+GGG - Chr3:972737-972756 MsG0380011528.01.T01:intron 30.0%
!!! TCATTTTAGTCCTTGTTTTG+AGG - Chr3:972736-972755 MsG0380011528.01.T01:intron 30.0%
AACCATGAATTATGTCAAGC+TGG - Chr3:973838-973857 MsG0380011528.01.T01:CDS 35.0%
AATAGCATATGAGTATGAGC+TGG + Chr3:971632-971651 None:intergenic 35.0%
AATGACATCAAGAATATCCC+AGG + Chr3:973105-973124 None:intergenic 35.0%
ACACGCAAGAAAATTGAAAG+AGG + Chr3:973151-973170 None:intergenic 35.0%
AGAATGTTAATTTCCCTCTG+AGG - Chr3:972393-972412 MsG0380011528.01.T01:intron 35.0%
AGCGGATATTTGATCATGAA+AGG - Chr3:973356-973375 MsG0380011528.01.T01:intron 35.0%
ATCACAACAATGACAAGGTT+AGG + Chr3:973037-973056 None:intergenic 35.0%
ATCAGTCTCGAAATTTAGGT+TGG - Chr3:973558-973577 MsG0380011528.01.T01:intron 35.0%
CAAAACACCAGATATTTGCA+GGG + Chr3:972587-972606 None:intergenic 35.0%
CCAAAATGTCAGATATTTGC+AGG - Chr3:972908-972927 MsG0380011528.01.T01:intron 35.0%
CGAGATTTGATCACAAAGTT+TGG + Chr3:971014-971033 None:intergenic 35.0%
CGGATATTTGATCATGAAAG+GGG - Chr3:973358-973377 MsG0380011528.01.T01:intron 35.0%
CTCAATATATTTAGGCGTAC+CGG - Chr3:971678-971697 MsG0380011528.01.T01:intron 35.0%
CTTTAGACATCAACGATATG+AGG - Chr3:974084-974103 MsG0380011528.01.T01:CDS 35.0%
GAGAAGTGAGTGTAAGATTA+AGG - Chr3:970843-970862 MsG0380011528.01.T01:CDS 35.0%
GAGAATTAAAAGTAGGGGTT+TGG - Chr3:971096-971115 MsG0380011528.01.T01:CDS 35.0%
GCGGATATTTGATCATGAAA+GGG - Chr3:973357-973376 MsG0380011528.01.T01:intron 35.0%
GGGAGTTTCATAAAACTTAC+TGG - Chr3:973183-973202 MsG0380011528.01.T01:intron 35.0%
GTACGTTTGGATATGAGAAA+AGG - Chr3:970369-970388 MsG0380011528.01.T01:CDS 35.0%
GTCTATCAGTCTCGAAATTT+AGG - Chr3:973554-973573 MsG0380011528.01.T01:intron 35.0%
TATATATGTTGTCACCAACG+AGG - Chr3:973643-973662 MsG0380011528.01.T01:intron 35.0%
TATGTCAAGCTGGAAACTTT+GGG - Chr3:973848-973867 MsG0380011528.01.T01:CDS 35.0%
TCAAGAATATCCCAGGAAAA+TGG + Chr3:973098-973117 None:intergenic 35.0%
TGTCATTGTTGTGATACACA+GGG - Chr3:973042-973061 MsG0380011528.01.T01:intron 35.0%
TGTGTATCACAACAATGACA+AGG + Chr3:973042-973061 None:intergenic 35.0%
TGTTGTGGATGAAAGATTGA+TGG + Chr3:973963-973982 None:intergenic 35.0%
TTATGTCAAGCTGGAAACTT+TGG - Chr3:973847-973866 MsG0380011528.01.T01:CDS 35.0%
TTCCAGCTTGACATAATTCA+TGG + Chr3:973843-973862 None:intergenic 35.0%
TTGTCATTGTTGTGATACAC+AGG - Chr3:973041-973060 MsG0380011528.01.T01:intron 35.0%
! ATAGCAATTTTCATCCTCAG+AGG + Chr3:972410-972429 None:intergenic 35.0%
! ATTAAGAGTGTACGAGTTGT+TGG - Chr3:970463-970482 MsG0380011528.01.T01:CDS 35.0%
! CACTTTGCATTTGTTGAGTA+TGG - Chr3:970880-970899 MsG0380011528.01.T01:CDS 35.0%
! CCTGCAAATATCTGACATTT+TGG + Chr3:972911-972930 None:intergenic 35.0%
! TACCATGTCTTACTTGCTTT+TGG - Chr3:973473-973492 MsG0380011528.01.T01:intron 35.0%
! TAGCAATTTTCATCCTCAGA+GGG + Chr3:972409-972428 None:intergenic 35.0%
! TCAGTCTCGAAATTTAGGTT+GGG - Chr3:973559-973578 MsG0380011528.01.T01:intron 35.0%
! TTCTGGTACTTAGCCTATTT+TGG - Chr3:973326-973345 MsG0380011528.01.T01:intron 35.0%
!! GAATGAGAAGTATTCTGAGT+TGG + Chr3:971317-971336 None:intergenic 35.0%
!! GATAGTTTCCTCTGAAACTT+TGG - Chr3:971514-971533 MsG0380011528.01.T01:intron 35.0%
!! GATTTTAGTCCCTCAAAACA+AGG + Chr3:972749-972768 None:intergenic 35.0%
!! GTTGGTCACCATTTTTCTTT+GGG - Chr3:972498-972517 MsG0380011528.01.T01:intron 35.0%
!! TGTTGGTCACCATTTTTCTT+TGG - Chr3:972497-972516 MsG0380011528.01.T01:intron 35.0%
!!! CAAAATTTGGTTTTGGTCCT+TGG + Chr3:972839-972858 None:intergenic 35.0%
!!! TTGCCTTATTTTATGCTTCG+GGG - Chr3:973876-973895 MsG0380011528.01.T01:CDS 35.0%
AAAGGAAAATGCCTACTTGC+TGG - Chr3:974054-974073 MsG0380011528.01.T01:CDS 40.0%
AAATGGTCCCTGCAAATATC+TGG - Chr3:972577-972596 MsG0380011528.01.T01:intron 40.0%
AACAATGGGAAATCCATGGA+AGG - Chr3:973592-973611 MsG0380011528.01.T01:intron 40.0%
AAGATTTCCCCTAAACCTTG+AGG + Chr3:970936-970955 None:intergenic 40.0%
ACAAAGTCAACAACCTTCCA+TGG + Chr3:973608-973627 None:intergenic 40.0%
ACTCATAAAGTGAGGTGTAC+CGG + Chr3:972210-972229 None:intergenic 40.0%
AGATTTCCCCTAAACCTTGA+GGG + Chr3:970935-970954 None:intergenic 40.0%
AGGCTGAAAGAATTGATGCT+AGG - Chr3:970432-970451 MsG0380011528.01.T01:CDS 40.0%
AGTGTATGAACATTCGCGTT+AGG - Chr3:972265-972284 MsG0380011528.01.T01:intron 40.0%
ATTGGCATGATCCCGAAAAT+GGG - Chr3:972451-972470 MsG0380011528.01.T01:intron 40.0%
CCAAAACACCAGATATTTGC+AGG + Chr3:972588-972607 None:intergenic 40.0%
CGAAGACGATCAATCAATTC+TGG - Chr3:973309-973328 MsG0380011528.01.T01:intron 40.0%
GACGATGATGAAGAACAAGA+TGG - Chr3:970566-970585 MsG0380011528.01.T01:CDS 40.0%
GGCTGAAAGAATTGATGCTA+GGG - Chr3:970433-970452 MsG0380011528.01.T01:CDS 40.0%
GTCATTGTTGTGATACACAG+GGG - Chr3:973043-973062 MsG0380011528.01.T01:intron 40.0%
GTCGCTTCATGTAAAAGTTC+TGG - Chr3:973521-973540 MsG0380011528.01.T01:intron 40.0%
GTGTGACGTAGATGTTACAT+CGG + Chr3:973732-973751 None:intergenic 40.0%
TAACATCTACGTCACACCTA+AGG - Chr3:973735-973754 MsG0380011528.01.T01:intron 40.0%
TAACCCTAATGCATCGTCAA+GGG + Chr3:970333-970352 None:intergenic 40.0%
TACGGTACACTCATAAAGTG+AGG + Chr3:972218-972237 None:intergenic 40.0%
TAGACATCAACGATATGAGG+TGG - Chr3:974087-974106 MsG0380011528.01.T01:CDS 40.0%
TCCGCTAGAACATCCAAAAT+AGG + Chr3:973342-973361 None:intergenic 40.0%
TGCCAAAAGCAAGTAAGACA+TGG + Chr3:973478-973497 None:intergenic 40.0%
TGTGACGTAGATGTTACATC+GGG + Chr3:973731-973750 None:intergenic 40.0%
TTAACCCTAATGCATCGTCA+AGG + Chr3:970334-970353 None:intergenic 40.0%
TTCCCCCGAAGCATAAAATA+AGG + Chr3:973882-973901 None:intergenic 40.0%
TTTCTTGCGTGTGCAAGAAT+TGG - Chr3:973159-973178 MsG0380011528.01.T01:intron 40.0%
TTTCTTTCCACCTATTCGGA+AGG - Chr3:972315-972334 MsG0380011528.01.T01:intron 40.0%
! AAAATGCCTACTTGCTGGAT+TGG - Chr3:974059-974078 MsG0380011528.01.T01:CDS 40.0%
! AAGTAGGCATTTTCCTTTGG+AGG + Chr3:974052-974071 None:intergenic 40.0%
! AGCAAGTAGGCATTTTCCTT+TGG + Chr3:974055-974074 None:intergenic 40.0%
! CAAGTTGAGTACACCTATGA+TGG + Chr3:973669-973688 None:intergenic 40.0%
! CCTGCAAATATCTGGTGTTT+TGG - Chr3:972585-972604 MsG0380011528.01.T01:intron 40.0%
!! GCCTATTTTGGATGTTCTAG+CGG - Chr3:973338-973357 MsG0380011528.01.T01:intron 40.0%
!! GTCTTACTTGCTTTTGGCAA+AGG - Chr3:973479-973498 MsG0380011528.01.T01:intron 40.0%
!!! CTGTGATGGACAACTTTTAG+TGG - Chr3:973766-973785 MsG0380011528.01.T01:intron 40.0%
!!! TGCCTTATTTTATGCTTCGG+GGG - Chr3:973877-973896 MsG0380011528.01.T01:CDS 40.0%
AATCACACCTTCAGTTCAGC+TGG - Chr3:970631-970650 MsG0380011528.01.T01:CDS 45.0%
AGAGTGTACGAGTTGTTGGA+CGG - Chr3:970467-970486 MsG0380011528.01.T01:CDS 45.0%
AGTGGTTCATATTGAGTCCG+AGG - Chr3:973784-973803 MsG0380011528.01.T01:intron 45.0%
ATCTACGTCACACCTAAGGT+TGG - Chr3:973739-973758 MsG0380011528.01.T01:intron 45.0%
CATCACAGCAAACCAACCTT+AGG + Chr3:973754-973773 None:intergenic 45.0%
CATTGGCATGATCCCGAAAA+TGG - Chr3:972450-972469 MsG0380011528.01.T01:intron 45.0%
CGTCTTCTTACCTTCCGAAT+AGG + Chr3:972328-972347 None:intergenic 45.0%
CTTCTTACCTTCCGAATAGG+TGG + Chr3:972325-972344 None:intergenic 45.0%
TAGAACTGGAGTTCCTCCAA+AGG - Chr3:974036-974055 MsG0380011528.01.T01:CDS 45.0%
TCATCGTCATCACGATCCAA+TGG + Chr3:970554-970573 None:intergenic 45.0%
TCTCCCTTGACGATGCATTA+GGG - Chr3:970327-970346 MsG0380011528.01.T01:CDS 45.0%
TTGCGTGTGCAAGAATTGGA+GGG - Chr3:973163-973182 MsG0380011528.01.T01:intron 45.0%
! AAAGCACCAATCCAGCAAGT+AGG + Chr3:974068-974087 None:intergenic 45.0%
!! ACTTGCTTTTGGCAAAGGCT+CGG - Chr3:973484-973503 MsG0380011528.01.T01:intron 45.0%
!! CTAAGGTTGGTTTGCTGTGA+TGG - Chr3:973752-973771 MsG0380011528.01.T01:intron 45.0%
!!! AAATAAAAAAACATATATTT+TGG - Chr3:972980-972999 MsG0380011528.01.T01:intron 5.0%
CTCTCCCTTGACGATGCATT+AGG - Chr3:970326-970345 MsG0380011528.01.T01:CDS 50.0%
CTTGCGTGTGCAAGAATTGG+AGG - Chr3:973162-973181 MsG0380011528.01.T01:intron 50.0%
CTTTCAAAACCCCACCTCCT+CGG + Chr3:973926-973945 None:intergenic 50.0%
GCGAATGTTCACACATGAGC+TGG + Chr3:971573-971592 None:intergenic 50.0%
GTAGGGTCCCTCAAGGTTTA+GGG - Chr3:970925-970944 MsG0380011528.01.T01:CDS 50.0%
GTTCACACATGAGCTGGATG+AGG + Chr3:971567-971586 None:intergenic 50.0%
TACACCTATGATGGCCTCGT+TGG + Chr3:973660-973679 None:intergenic 50.0%
TAGGGTCCCTCAAGGTTTAG+GGG - Chr3:970926-970945 MsG0380011528.01.T01:CDS 50.0%
TCGGTCAGCTATGCTGATGA+AGG + Chr3:973276-973295 None:intergenic 50.0%
TCTATGCATTGAGCAACCCG+AGG - Chr3:973906-973925 MsG0380011528.01.T01:CDS 50.0%
TTTCAAAACCCCACCTCCTC+GGG + Chr3:973925-973944 None:intergenic 50.0%
! GGATGAGAAGTGTGCTGAGT+TGG + Chr3:971611-971630 None:intergenic 50.0%
!! TAAGTTGGTAGGGTCCCTCA+AGG - Chr3:970918-970937 MsG0380011528.01.T01:CDS 50.0%
ATGCATTGAGCAACCCGAGG+AGG - Chr3:973909-973928 MsG0380011528.01.T01:CDS 55.0%
ATTGAGCAACCCGAGGAGGT+GGG - Chr3:973913-973932 MsG0380011528.01.T01:CDS 55.0%
CCAGTGTCCAGCTGAACTGA+AGG + Chr3:970641-970660 None:intergenic 55.0%
CCTTCAGTTCAGCTGGACAC+TGG - Chr3:970638-970657 MsG0380011528.01.T01:CDS 55.0%
GGTAGGGTCCCTCAAGGTTT+AGG - Chr3:970924-970943 MsG0380011528.01.T01:CDS 55.0%
GTCACCAACGAGGCCATCAT+AGG - Chr3:973653-973672 MsG0380011528.01.T01:intron 55.0%
! TGCTTTTGGCAAAGGCTCGG+AGG - Chr3:973487-973506 MsG0380011528.01.T01:intron 55.0%
CATTGAGCAACCCGAGGAGG+TGG - Chr3:973912-973931 MsG0380011528.01.T01:CDS 60.0%
TTGAGCAACCCGAGGAGGTG+GGG - Chr3:973914-973933 MsG0380011528.01.T01:CDS 60.0%
Chromosome Type Strat End Strand Name
Chr3 gene 970317 974129 970317 ID=MsG0380011528.01;Name=MsG0380011528.01
Chr3 mRNA 970317 974129 970317 ID=MsG0380011528.01.T01;Parent=MsG0380011528.01;Name=MsG0380011528.01.T01;_AED=0.47;_eAED=0.48;_QI=0|0|0|1|1|1|2|0|469
Chr3 exon 973787 974129 973787 ID=MsG0380011528.01.T01:exon:657;Parent=MsG0380011528.01.T01
Chr3 exon 970317 971383 970317 ID=MsG0380011528.01.T01:exon:656;Parent=MsG0380011528.01.T01
Chr3 CDS 973787 974129 973787 ID=MsG0380011528.01.T01:cds;Parent=MsG0380011528.01.T01
Chr3 CDS 970317 971383 970317 ID=MsG0380011528.01.T01:cds;Parent=MsG0380011528.01.T01
Gene Sequence

>MsG0380011528.01.T01

ATGAAGAATCTCTCCCTTGACGATGCATTAGGGTTAATCTCAGCATTAAAATGTACGTTTGGATATGAGAAAAGGGAAAAATATGAATCTTTTCTACAAATTATGAAGGATTACAAGGCTGAAAGAATTGATGCTAGGGTTGTCAAATTAAGAGTGTACGAGTTGTTGGACGGCCATGAAGATTTAATTTTGAGATTCAACACCTTCTTGCCAACTAAATATGAAATCAAACTTCCATTGGATCGTGATGACGATGATGAAGAACAAGATGGTCGAATGACAAAGACAAATATCAAAGTGCTAAAGAAATATCGAATCACACCTTCAGTTCAGCTGGACACTGGGGAAGCCATGAATAACATAGAAGATAATTGTCCATTTTCCTGGGATATTCTTGATGTCATTTACAGAGATCTAGATTTCGATGACCTCTTTCAATTTTCTTGCGTGTGCAAGAATTGGAGGGAGTTTCATAAAACTTACTGGAAAAAATTCTTGGCATCCCAAGAACCATTAGTTATTAAAAAGTCTTACCATGATAAGAAATTCTTTTCCTTCATCAGCATAGCTGACCGAAAAGTTTATCACTCGAAGACGATCAATCAATTCTGGTACTTAGCCTATTTTGGATGTTCTAGCGGATATTTGATCATGAAAGGGGACAATAATTCTTTTCTGCTATTAAATCCATTTACAAGAAGAAAGAAGGTAATCAATACATCAACCTTTAAAGTCAATTCTACATATTTTGCTTACCATGTCTTACTTGCTTTTGGCAAAGGCTCGGAGGAATTTGTCTTAGTCGCTTCATGTAAAAGTTCTGGCAATTTGTATGTCTATCAGTCTCGAAATTTAGGTTGGGTTACATATTTAACAATGGGAAATCCATGGAAGGTTGTTGACTTTGTTGTGTTGCATAATACTATATATGTTGTCACCAACGAGGCCATCATAGGTGTACTCAACTTGAATTCCTCAAATATAAATTTTTTAGAAATGAAGAGTATGCCCGATGTAACATCTACGTCACACCTAAGGTTGGTTTGCTGTGATGGACAACTTTTAGTGGTTCATATTGAGTCCGAGGAAATATTGAATGTTTACAAGGTAGACTTCTCAACCATGAATTATGTCAAGCTGGAAACTTTGGGTGACATTGCCTTATTTTATGCTTCGGGGGAATACTTCTATGCATTGAGCAACCCGAGGAGGTGGGGTTTTGAAAGCAACTCTTTGTATGCCATCAATCTTTCATCCACAACATGTAAAGTGTGTTTAGGGGATGATAACAGACTGCCAAAATACATTAAGCATGATAGAACTGGAGTTCCTCCAAAGGAAAATGCCTACTTGCTGGATTGGTGCTTTAGACATCAACGATATGAGGTGGATTTTTCTCCAAATGAGTAA
Protein sequence

>MsG0380011528.01.T01

MKNLSLDDALGLISALKCTFGYEKREKYESFLQIMKDYKAERIDARVVKLRVYELLDGHEDLILRFNTFLPTKYEIKLPLDRDDDDEEQDGRMTKTNIKVLKKYRITPSVQLDTGEAMNNIEDNCPFSWDILDVIYRDLDFDDLFQFSCVCKNWREFHKTYWKKFLASQEPLVIKKSYHDKKFFSFISIADRKVYHSKTINQFWYLAYFGCSSGYLIMKGDNNSFLLLNPFTRRKKVINTSTFKVNSTYFAYHVLLAFGKGSEEFVLVASCKSSGNLYVYQSRNLGWVTYLTMGNPWKVVDFVVLHNTIYVVTNEAIIGVLNLNSSNINFLEMKSMPDVTSTSHLRLVCCDGQLLVVHIESEEILNVYKVDFSTMNYVKLETLGDIALFYASGEYFYALSNPRRWGFESNSLYAINLSSTTCKVCLGDDNRLPKYIKHDRTGVPPKENAYLLDWCFRHQRYEVDFSPNE*