AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0380012100.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380012100.01.T01 MTR_7g102890 72.289 83 23 0 130 212 178 260 1.06e-33 121
MsG0380012100.01.T01 MTR_5g012450 50.485 103 51 0 111 213 84 186 1.28e-30 111
MsG0380012100.01.T01 MTR_3g031290 61.798 89 34 0 125 213 194 282 3.36e-29 110
MsG0380012100.01.T01 MTR_8g037820 57.143 84 36 0 130 213 95 178 2.61e-27 102
MsG0380012100.01.T01 MTR_2g040320 57.831 83 35 0 130 212 25 107 4.51e-26 97.4
MsG0380012100.01.T01 MTR_2g087750 61.039 77 30 0 137 213 46 122 7.62e-25 94.7
MsG0380012100.01.T01 MTR_1g073170 88.000 50 6 0 1 50 5 54 2.23e-24 97.1
MsG0380012100.01.T01 MTR_3g068165 49.438 89 45 0 125 213 18 106 7.46e-23 89.0
MsG0380012100.01.T01 MTR_5g080210 48.193 83 43 0 130 212 102 184 2.46e-19 82.0
MsG0380012100.01.T01 MTR_4g061240 44.048 84 47 0 130 213 123 206 1.24e-18 80.9
MsG0380012100.01.T01 MTR_5g041190 52.174 69 33 0 145 213 146 214 1.36e-17 78.2
MsG0380012100.01.T01 MTR_2g079500 58.108 74 31 0 58 131 105 178 4.48e-17 79.3
MsG0380012100.01.T01 MTR_5g054960 53.623 69 32 0 131 199 47 115 5.28e-17 74.7
MsG0380012100.01.T01 MTR_2g104350 45.783 83 45 0 131 213 160 242 3.83e-16 74.7
MsG0380012100.01.T01 MTR_1g045610 62.000 50 19 0 1 50 6 55 1.53e-15 73.6
MsG0380012100.01.T01 MTR_5g054985 42.697 89 51 0 124 212 40 128 1.96e-15 70.5
MsG0380012100.01.T01 MTR_2g089160 43.820 89 50 0 124 212 131 219 4.96e-15 71.2
MsG0380012100.01.T01 MTR_7g013900 36.458 96 57 1 121 212 16 111 7.84e-15 68.2
MsG0380012100.01.T01 MTR_5g025040 39.024 82 50 0 131 212 76 157 8.47e-15 69.3
MsG0380012100.01.T01 MTR_4g097730 42.857 84 48 0 129 212 128 211 9.03e-15 70.5
MsG0380012100.01.T01 MTR_1g055370 36.250 80 51 0 131 210 57 136 1.74e-14 68.2
MsG0380012100.01.T01 MTR_2g031500 42.857 70 40 0 134 203 54 123 5.86e-13 63.5
MsG0380012100.01.T01 MTR_4g062340 51.724 58 28 0 155 212 2 59 1.09e-12 61.2
MsG0380012100.01.T01 MTR_5g014380 31.325 83 57 0 130 212 138 220 2.18e-12 64.3
MsG0380012100.01.T01 MTR_8g078210 36.585 82 52 0 131 212 25 106 2.34e-12 61.6
MsG0380012100.01.T01 MTR_7g022630 50.000 56 28 0 157 212 44 99 3.60e-12 60.8
MsG0380012100.01.T01 MTR_4g079520 34.118 85 56 0 129 213 15 99 6.17e-12 60.1
MsG0380012100.01.T01 MTR_5g036930 34.568 81 53 0 131 211 31 111 6.84e-12 62.4
MsG0380012100.01.T01 MTR_5g056220 38.462 78 48 0 135 212 1 78 1.89e-11 58.9
MsG0380012100.01.T01 MTR_2g095160 40.506 79 45 1 137 213 99 177 5.93e-11 59.3
MsG0380012100.01.T01 MTR_7g052100 39.286 84 51 0 129 212 147 230 6.98e-11 60.1
MsG0380012100.01.T01 MTR_4g054990 50.000 60 30 0 130 189 81 140 9.67e-11 58.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380012100.01.T01 AT5G53760 82.927 41 7 0 91 131 146 186 2.01e-15 74.7
MsG0380012100.01.T01 AT5G53760 82.927 41 7 0 91 131 146 186 2.01e-15 74.7
MsG0380012100.01.T01 AT1G26700 78.049 41 9 0 91 131 141 181 7.51e-15 73.2
MsG0380012100.01.T01 AT1G26700 78.049 41 9 0 91 131 141 181 7.51e-15 73.2
MsG0380012100.01.T01 AT4G13480 73.684 38 10 0 13 50 3 40 2.08e-12 64.7
MsG0380012100.01.T01 AT3G24310 71.053 38 11 0 13 50 15 52 2.70e-12 64.7

Find 45 sgRNAs with CRISPR-Local

Find 359 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TAAGATTTGGACTTTGGTTT+TGG 0.240189 3:-10907311 MsG0380012100.01.T01:intron
AACTCTGTCTCTAGGCTTGC+AGG 0.288324 3:-10907998 MsG0380012100.01.T01:intron
CATATATAAGATTTGGACTT+TGG 0.347190 3:-10907317 MsG0380012100.01.T01:intron
CAATGCTCAAACAAGCTAAA+AGG 0.360116 3:+10902081 None:intergenic
AAGGTTAAATTGTTATCTTT+AGG 0.363619 3:-10902161 MsG0380012100.01.T01:CDS
CAATGGCTAACAACATTGTT+AGG 0.367062 3:+10905725 None:intergenic
TGTTGTTGTCTCTTTGTTTG+TGG 0.371787 3:-10907225 MsG0380012100.01.T01:CDS
GTGTAATAGAAGAAGATAGA+TGG 0.374122 3:-10908096 MsG0380012100.01.T01:CDS
AACTTCAATTCCTTGGTTGT+TGG 0.407946 3:-10902186 MsG0380012100.01.T01:CDS
TAATATGGCTCCTTTGTACC+TGG 0.428641 3:-10902253 MsG0380012100.01.T01:CDS
TAAATTGTTATCTTTAGGTT+GGG 0.433027 3:-10902156 MsG0380012100.01.T01:CDS
TATAAAAGAACCAAGGTCAT+TGG 0.439838 3:-10907267 MsG0380012100.01.T01:CDS
TTAAATTGTTATCTTTAGGT+TGG 0.441191 3:-10902157 MsG0380012100.01.T01:CDS
GAAGAAGATAGATGGAAGAA+AGG 0.456762 3:-10908088 MsG0380012100.01.T01:CDS
ATGTTGTAACTTCAATTCCT+TGG 0.462240 3:-10902193 MsG0380012100.01.T01:CDS
GAACCATTTGTTCCGTATGA+AGG 0.465040 3:-10905808 MsG0380012100.01.T01:CDS
AGACCTTCATACGGAACAAA+TGG 0.486625 3:+10905805 None:intergenic
CATTGGCCTTGACTCCTACC+TGG 0.508072 3:-10907250 MsG0380012100.01.T01:CDS
AGCAGCATGGTGAAGGCAGA+TGG 0.518000 3:-10908021 MsG0380012100.01.T01:CDS
AATTCCTTGGTTGTTGGACA+AGG 0.524339 3:-10902180 MsG0380012100.01.T01:CDS
TCCTTTGTACCTGGGTTGTG+TGG 0.540878 3:-10902244 MsG0380012100.01.T01:CDS
TATGTCAAGCAGCATGGTGA+AGG 0.550639 3:-10908028 MsG0380012100.01.T01:CDS
ATAGATGGAAGAAAGGACCT+TGG 0.553968 3:-10908081 MsG0380012100.01.T01:CDS
GCAGATGGAACTCTGTCTCT+AGG 0.556467 3:-10908006 MsG0380012100.01.T01:CDS
CAAAGAGACAACAACAGACC+AGG 0.561537 3:+10907232 None:intergenic
ATGTATTCATGTATGATGGA+AGG 0.568242 3:-10908133 None:intergenic
AATATGGCTCCTTTGTACCT+GGG 0.576686 3:-10902252 MsG0380012100.01.T01:CDS
GGAGTCAAGGCCAATGACCT+TGG 0.579754 3:+10907257 None:intergenic
TTGTCTTCCTCAGTAGTCCA+AGG 0.591695 3:+10908064 None:intergenic
AACAGACCAGGTAGGAGTCA+AGG 0.593722 3:+10907244 None:intergenic
TGTATGATGGAAGGAAACAT+TGG 0.602395 3:-10908124 MsG0380012100.01.T01:CDS
AAGGTCTAGAGCAGTTGCAT+CGG 0.615697 3:-10905789 MsG0380012100.01.T01:CDS
ATTGAGTATGTCAAGCAGCA+TGG 0.618335 3:-10908034 MsG0380012100.01.T01:CDS
TCCACACAACCCAGGTACAA+AGG 0.620883 3:+10902243 None:intergenic
TCGTTCGTTCCACACAACCC+AGG 0.620892 3:+10902235 None:intergenic
TGATGGAAGGAAACATTGGA+TGG 0.634058 3:-10908120 MsG0380012100.01.T01:CDS
TTAACCTTGTCCAACAACCA+AGG 0.636632 3:+10902176 None:intergenic
AACTGCTCTAGACCTTCATA+CGG 0.646375 3:+10905796 None:intergenic
GAAAGGACCTTGGACTACTG+AGG 0.653020 3:-10908071 MsG0380012100.01.T01:CDS
TTTACACATATGACAAGTGG+TGG 0.654318 3:-10902302 MsG0380012100.01.T01:CDS
CAGTTTACACATATGACAAG+TGG 0.658176 3:-10902305 MsG0380012100.01.T01:CDS
ACAATATCTCACCTTCACAA+TGG 0.660813 3:+10905708 None:intergenic
GAGACAACAACAGACCAGGT+AGG 0.678369 3:+10907236 None:intergenic
AATGTTGTTAGCCATTGTGA+AGG 0.689234 3:-10905719 MsG0380012100.01.T01:intron
CAGAAACTATAAAAGAACCA+AGG 0.694698 3:-10907274 MsG0380012100.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAACTAAAAAAAAATCATA+GGG + Chr3:10907330-10907349 None:intergenic 10.0%
!! TATAACTAAAAAAAAATCAT+AGG + Chr3:10907331-10907350 None:intergenic 10.0%
!!! TTTTAATGTTATTACTAATA+TGG - Chr3:10903682-10903701 MsG0380012100.01.T01:intron 10.0%
!! AAACATCTATATAAAATCAT+AGG + Chr3:10907296-10907315 None:intergenic 15.0%
!! AACATCTATATAAAATCATA+GGG + Chr3:10907295-10907314 None:intergenic 15.0%
!! AATAACTTAAATAGCTTAAA+AGG + Chr3:10904561-10904580 None:intergenic 15.0%
!! AATCATAATTTACACATTAT+TGG - Chr3:10906484-10906503 MsG0380012100.01.T01:intron 15.0%
!! AATGAGTTCAATATTAAAAT+TGG - Chr3:10902369-10902388 MsG0380012100.01.T01:intron 15.0%
!! AATTTAGAAAACTAAAGATT+AGG + Chr3:10902401-10902420 None:intergenic 15.0%
!! ATAATTAAGATGAAACTAAT+TGG + Chr3:10906524-10906543 None:intergenic 15.0%
!! ATCTATTTAATGATAACTTA+AGG + Chr3:10907747-10907766 None:intergenic 15.0%
!! GTAAATTATGATTACATATT+AGG + Chr3:10906477-10906496 None:intergenic 15.0%
!! TAACTAAAAAAAAATCATAG+GGG + Chr3:10907329-10907348 None:intergenic 15.0%
!! TCAATACATCAAATTAAAAA+AGG + Chr3:10903317-10903336 None:intergenic 15.0%
!! TCTATTTAATGATAACTTAA+GGG + Chr3:10907746-10907765 None:intergenic 15.0%
!! TTAATCATATATAAGTCTTA+CGG - Chr3:10903350-10903369 MsG0380012100.01.T01:intron 15.0%
!! TTTATAAAAAAAGATGGAAA+AGG - Chr3:10906088-10906107 MsG0380012100.01.T01:intron 15.0%
!!! AAATTAAGCTTTTAAATTTG+TGG - Chr3:10902416-10902435 MsG0380012100.01.T01:intron 15.0%
!!! ATTGGTTTTTTTTTTTTTGA+AGG - Chr3:10904810-10904829 MsG0380012100.01.T01:intron 15.0%
!!! TAATTATTATGATATTTTCC+TGG - Chr3:10906537-10906556 MsG0380012100.01.T01:intron 15.0%
!!! TATTATTGAAGTGATTTTTA+TGG - Chr3:10905063-10905082 MsG0380012100.01.T01:intron 15.0%
!!! TTGGTTTTTTTTTTTTTGAA+GGG - Chr3:10904811-10904830 MsG0380012100.01.T01:intron 15.0%
!!! TTTTAGTCAAAAGTATAAAA+TGG - Chr3:10907373-10907392 MsG0380012100.01.T01:intron 15.0%
!! AAAACTATCACATTGTAATT+TGG + Chr3:10905500-10905519 None:intergenic 20.0%
!! AAGGTTAAATTGTTATCTTT+AGG - Chr3:10908036-10908055 MsG0380012100.01.T01:CDS 20.0%
!! ACAAAAATGTGTATAAAGTT+TGG + Chr3:10902232-10902251 None:intergenic 20.0%
!! ACATCTATATAAAATCATAG+GGG + Chr3:10907294-10907313 None:intergenic 20.0%
!! AGTACTTCTAAATTGATTAT+AGG - Chr3:10905160-10905179 MsG0380012100.01.T01:intron 20.0%
!! ATATTAGTTGCAAAAACAAA+CGG + Chr3:10907930-10907949 None:intergenic 20.0%
!! ATTTCTCCATAAAAAAAGTA+TGG + Chr3:10907574-10907593 None:intergenic 20.0%
!! ATTTGATATGTTATGAATCA+TGG - Chr3:10907048-10907067 MsG0380012100.01.T01:intron 20.0%
!! GTACTTCTAAATTGATTATA+GGG - Chr3:10905161-10905180 MsG0380012100.01.T01:intron 20.0%
!! GTGTGTTTATATAACAATAT+CGG - Chr3:10907229-10907248 MsG0380012100.01.T01:CDS 20.0%
!! TAATCATATATAAGTCTTAC+GGG - Chr3:10903351-10903370 MsG0380012100.01.T01:intron 20.0%
!! TATGTTAAATTTGAATGCAA+AGG + Chr3:10905453-10905472 None:intergenic 20.0%
!! TCATAATATTTCCGATTATT+TGG - Chr3:10907867-10907886 MsG0380012100.01.T01:intron 20.0%
!! TCTCTTTATATATTATACAC+TGG - Chr3:10906312-10906331 MsG0380012100.01.T01:intron 20.0%
!! TGAAAATATATTACTCATCA+AGG - Chr3:10902552-10902571 MsG0380012100.01.T01:intron 20.0%
!! TTAAATTGTTATCTTTAGGT+TGG - Chr3:10908040-10908059 MsG0380012100.01.T01:CDS 20.0%
!! TTAGTTTATGTAGAGTAAAA+AGG + Chr3:10902632-10902651 None:intergenic 20.0%
!! TTTCTTCTTTATCTCTTAAA+AGG - Chr3:10904096-10904115 MsG0380012100.01.T01:intron 20.0%
!!! ATTCATTTTCAACACTTTTA+AGG - Chr3:10904730-10904749 MsG0380012100.01.T01:intron 20.0%
!!! GAGATTTTGATATAAAGTTT+CGG + Chr3:10906296-10906315 None:intergenic 20.0%
!!! GGTTATATTTTTTTTTTCTG+TGG - Chr3:10903439-10903458 MsG0380012100.01.T01:intron 20.0%
!!! GTGTATTACTTTTTTTTGAA+AGG + Chr3:10905870-10905889 None:intergenic 20.0%
!!! TAAATTGTTATCTTTAGGTT+GGG - Chr3:10908041-10908060 MsG0380012100.01.T01:CDS 20.0%
!!! TAATTTGCTCATTTTTTCTT+GGG - Chr3:10906658-10906677 MsG0380012100.01.T01:intron 20.0%
!!! TATTACTTTTTTTTGAAAGG+TGG + Chr3:10905867-10905886 None:intergenic 20.0%
!!! TATTAGTATTAATCCCTTTT+TGG - Chr3:10906414-10906433 MsG0380012100.01.T01:intron 20.0%
!!! TCTAGCTAATTTCTTTTTTT+TGG - Chr3:10905402-10905421 MsG0380012100.01.T01:intron 20.0%
!!! TGTCATTTAAAGAAAACATA+GGG + Chr3:10907686-10907705 None:intergenic 20.0%
!!! TTCATTTTCAACACTTTTAA+GGG - Chr3:10904731-10904750 MsG0380012100.01.T01:intron 20.0%
!!! TTTCTCCATAAAAAAAGTAT+GGG + Chr3:10907573-10907592 None:intergenic 20.0%
!!! TTTTGAATAAACTATTCCTT+TGG - Chr3:10903399-10903418 MsG0380012100.01.T01:intron 20.0%
! AAAAATAATAGTGCTCCAAA+AGG + Chr3:10905266-10905285 None:intergenic 25.0%
! AGTCAAAATTCACTGAAAAT+TGG - Chr3:10902315-10902334 MsG0380012100.01.T01:intron 25.0%
! ATTCAAAAACCCTTACAAAA+GGG + Chr3:10903387-10903406 None:intergenic 25.0%
! ATTTAATGATAACTTAAGGG+AGG + Chr3:10907743-10907762 None:intergenic 25.0%
! CAAAAAAAATAGCTGCAAAT+AGG - Chr3:10906228-10906247 MsG0380012100.01.T01:intron 25.0%
! CAAAGTCCAAATCTTATATA+TGG + Chr3:10902882-10902901 None:intergenic 25.0%
! CATATATAAGATTTGGACTT+TGG - Chr3:10902880-10902899 MsG0380012100.01.T01:intron 25.0%
! CTTTATATACAAAAAAGTGG+AGG - Chr3:10902796-10902815 MsG0380012100.01.T01:intron 25.0%
! GACCTTTATATACAAAAAAG+TGG - Chr3:10902793-10902812 MsG0380012100.01.T01:intron 25.0%
! GTCATTTAAAGAAAACATAG+GGG + Chr3:10907685-10907704 None:intergenic 25.0%
! TAACATATCAAATCCTAGAT+AGG + Chr3:10907041-10907060 None:intergenic 25.0%
! TATTCAAAAACCCTTACAAA+AGG + Chr3:10903388-10903407 None:intergenic 25.0%
! TGTACTGCATTTATTTGTAA+GGG - Chr3:10903247-10903266 MsG0380012100.01.T01:intron 25.0%
! TGTTAATCTATGTAGTTGTA+GGG - Chr3:10903067-10903086 MsG0380012100.01.T01:intron 25.0%
! TTAGCAAAATGCCTTAAAAA+TGG + Chr3:10903125-10903144 None:intergenic 25.0%
!! AATATATTTTCATCTCCATG+AGG + Chr3:10902544-10902563 None:intergenic 25.0%
!! AATGTTTTATGATGTAGTGT+CGG + Chr3:10906725-10906744 None:intergenic 25.0%
!! AATTATCATTTCCTTTTGTC+TGG - Chr3:10905349-10905368 MsG0380012100.01.T01:intron 25.0%
!! GTTTATGGATTAACTAACTT+TGG + Chr3:10902284-10902303 None:intergenic 25.0%
!! TTTAAAACAAAGACTAGATG+TGG - Chr3:10905536-10905555 MsG0380012100.01.T01:intron 25.0%
!! TTTAGTCTTCATCATAAACA+TGG + Chr3:10906047-10906066 None:intergenic 25.0%
!!! AAAACAACCATGTTTGTTTT+TGG - Chr3:10908072-10908091 MsG0380012100.01.T01:CDS 25.0%
!!! AAAACAGATGTTGATAACTT+AGG + Chr3:10907778-10907797 None:intergenic 25.0%
!!! AAACAGATGTTGATAACTTA+GGG + Chr3:10907777-10907796 None:intergenic 25.0%
!!! AGAAGTTTGTTCCATTTTTA+AGG - Chr3:10903111-10903130 MsG0380012100.01.T01:intron 25.0%
!!! AGTGATCAATTTTTTTGCAA+TGG - Chr3:10906999-10907018 MsG0380012100.01.T01:intron 25.0%
!!! ATTGTTCTCATAGTTTGTTT+CGG + Chr3:10903552-10903571 None:intergenic 25.0%
!!! CTAATTTGCTCATTTTTTCT+TGG - Chr3:10906657-10906676 MsG0380012100.01.T01:intron 25.0%
!!! CTATTTGCAGCTATTTTTTT+TGG + Chr3:10906230-10906249 None:intergenic 25.0%
!!! CTCCACTTTTTTGTATATAA+AGG + Chr3:10902798-10902817 None:intergenic 25.0%
!!! CTTTTCCCATACTTTTTTTA+TGG - Chr3:10907565-10907584 MsG0380012100.01.T01:intron 25.0%
!!! GCAATTTGTTATGTTTTTCA+GGG - Chr3:10904362-10904381 MsG0380012100.01.T01:intron 25.0%
!!! GGATTGCTTTTTTTTTTTTC+CGG + Chr3:10907164-10907183 None:intergenic 25.0%
!!! GTAGTTTTATTAGAAATGTG+AGG - Chr3:10905199-10905218 MsG0380012100.01.T01:intron 25.0%
!!! GTCTTTGTTTTAAATTGATG+CGG + Chr3:10905530-10905549 None:intergenic 25.0%
!!! GTGTCATTTAAAGAAAACAT+AGG + Chr3:10907687-10907706 None:intergenic 25.0%
!!! GTGTCTATTTTAAAACTAGA+GGG + Chr3:10907717-10907736 None:intergenic 25.0%
!!! GTTTGTTTTTGCAACTAATA+TGG - Chr3:10907929-10907948 MsG0380012100.01.T01:intron 25.0%
!!! TCTTTACTTTTGATACACAA+TGG - Chr3:10902758-10902777 MsG0380012100.01.T01:intron 25.0%
!!! TGCAATTTGTTATGTTTTTC+AGG - Chr3:10904361-10904380 MsG0380012100.01.T01:intron 25.0%
!!! TGTCTATTTTAAAACTAGAG+GGG + Chr3:10907716-10907735 None:intergenic 25.0%
!!! TTGAGTTGAAAAAAGGAAAA+TGG + Chr3:10904875-10904894 None:intergenic 25.0%
!!! TTGGGAACAAATTTTTTACA+AGG - Chr3:10906676-10906695 MsG0380012100.01.T01:intron 25.0%
!!! TTTTGCAATGGTTTTGTTTA+TGG - Chr3:10907011-10907030 MsG0380012100.01.T01:intron 25.0%
!!! TTTTTTCCGGATAATTTTGT+TGG + Chr3:10907151-10907170 None:intergenic 25.0%
AAAAAGATGGAAAAGGAAGA+AGG - Chr3:10906095-10906114 MsG0380012100.01.T01:intron 30.0%
AAAAGATGGAAAAGGAAGAA+GGG - Chr3:10906096-10906115 MsG0380012100.01.T01:intron 30.0%
AAACTAATTGGAACCAATGA+AGG + Chr3:10906512-10906531 None:intergenic 30.0%
AACAATCGACATTTGTTTGT+GGG - Chr3:10903566-10903585 MsG0380012100.01.T01:intron 30.0%
AATATGTTACACCCTCATAA+TGG - Chr3:10906945-10906964 MsG0380012100.01.T01:intron 30.0%
AATATTGAACTCATTCCATC+AGG + Chr3:10902364-10902383 None:intergenic 30.0%
AATCAACCTTAGTACATGTA+CGG + Chr3:10904301-10904320 None:intergenic 30.0%
ACCACACTTAAATATTTGCT+AGG + Chr3:10903183-10903202 None:intergenic 30.0%
ACTAAATTATAGTTCGCACA+TGG + Chr3:10905894-10905913 None:intergenic 30.0%
AGTCCAAATCTTATATATGG+AGG + Chr3:10902879-10902898 None:intergenic 30.0%
ATGTTGTAACTTCAATTCCT+TGG - Chr3:10908004-10908023 MsG0380012100.01.T01:CDS 30.0%
CAGAAACTATAAAAGAACCA+AGG - Chr3:10902923-10902942 MsG0380012100.01.T01:intron 30.0%
CATTCATAATCCTTATCATG+CGG - Chr3:10902587-10902606 MsG0380012100.01.T01:intron 30.0%
CTGTACTGCATTTATTTGTA+AGG - Chr3:10903246-10903265 MsG0380012100.01.T01:intron 30.0%
CTTATGAATCAAAGAGAAAC+TGG + Chr3:10902715-10902734 None:intergenic 30.0%
CTTTGATGGAATGCAAATAT+TGG + Chr3:10904175-10904194 None:intergenic 30.0%
GACTTGAATAACTCAGTTTA+TGG + Chr3:10902299-10902318 None:intergenic 30.0%
GCTCTATTATACAACTTTGA+TGG + Chr3:10904189-10904208 None:intergenic 30.0%
GTCCAAATCTTATATATGGA+GGG + Chr3:10902878-10902897 None:intergenic 30.0%
GTGTAATAGAAGAAGATAGA+TGG - Chr3:10902101-10902120 MsG0380012100.01.T01:CDS 30.0%
GTGTTAATCTATGTAGTTGT+AGG - Chr3:10903066-10903085 MsG0380012100.01.T01:intron 30.0%
TAGAGTAAAAAGGCAATTCT+TGG + Chr3:10902622-10902641 None:intergenic 30.0%
TATAAAAGAACCAAGGTCAT+TGG - Chr3:10902930-10902949 MsG0380012100.01.T01:intron 30.0%
TATAAGCAGTATTCAAACAG+TGG - Chr3:10905426-10905445 MsG0380012100.01.T01:intron 30.0%
TATACCACAAAACGATTCAT+TGG - Chr3:10904792-10904811 MsG0380012100.01.T01:intron 30.0%
TATATACCGTACATGTACTA+AGG - Chr3:10904292-10904311 MsG0380012100.01.T01:intron 30.0%
TCAGATTAGTAAACTGTAGT+GGG - Chr3:10904945-10904964 MsG0380012100.01.T01:intron 30.0%
TGATAAAGAAGGATGTTGAA+TGG - Chr3:10904236-10904255 MsG0380012100.01.T01:intron 30.0%
TGTAAACTGCACCAAATAAT+CGG + Chr3:10907881-10907900 None:intergenic 30.0%
TGTCATAGAGTTACCAAAAA+GGG + Chr3:10906430-10906449 None:intergenic 30.0%
TGTTTGCCAACAAAATTATC+CGG - Chr3:10907142-10907161 MsG0380012100.01.T01:intron 30.0%
TTAAATTCACCTACCATTAG+TGG + Chr3:10903960-10903979 None:intergenic 30.0%
TTGTCATAGAGTTACCAAAA+AGG + Chr3:10906431-10906450 None:intergenic 30.0%
! AAAACCAATGAATCGTTTTG+TGG + Chr3:10904799-10904818 None:intergenic 30.0%
! AAGAGAAACTGGTTTAATAG+AGG + Chr3:10902704-10902723 None:intergenic 30.0%
! AGATCTGAGATTGATAAAGA+AGG - Chr3:10904225-10904244 MsG0380012100.01.T01:intron 30.0%
! ATGAATCGTTTTGTGGTATA+AGG + Chr3:10904792-10904811 None:intergenic 30.0%
! GGCATGTTGATTATGTAATA+TGG - Chr3:10905726-10905745 MsG0380012100.01.T01:CDS 30.0%
! TATATTTTGTTCATGAGACC+AGG + Chr3:10906558-10906577 None:intergenic 30.0%
! TCTTTTCATGAATCAAGACT+TGG - Chr3:10906581-10906600 MsG0380012100.01.T01:intron 30.0%
! TGGATACAAAGTACTATGTT+AGG + Chr3:10902264-10902283 None:intergenic 30.0%
! TTATGAGGGTGTAACATATT+CGG + Chr3:10906945-10906964 None:intergenic 30.0%
!! AACAGATGTTGATAACTTAG+GGG + Chr3:10907776-10907795 None:intergenic 30.0%
!! CATAGGATATGTTGTTTCTT+TGG - Chr3:10906371-10906390 MsG0380012100.01.T01:intron 30.0%
!! CTTGAGTTTGAGTTGAAAAA+AGG + Chr3:10904882-10904901 None:intergenic 30.0%
!! TAAGATTTGGACTTTGGTTT+TGG - Chr3:10902886-10902905 MsG0380012100.01.T01:intron 30.0%
!!! AGTGTGGTTAGATTCTTTTT+TGG - Chr3:10903195-10903214 MsG0380012100.01.T01:intron 30.0%
!!! AGTTTTAAACACACTAGACT+AGG - Chr3:10902503-10902522 MsG0380012100.01.T01:intron 30.0%
!!! CTTTTTTCAACTCAAACTCA+AGG - Chr3:10904880-10904899 MsG0380012100.01.T01:intron 30.0%
!!! GCTATTTTTTTTGGTAGTGA+TGG + Chr3:10906221-10906240 None:intergenic 30.0%
!!! GGTGTCTATTTTAAAACTAG+AGG + Chr3:10907718-10907737 None:intergenic 30.0%
AAAAACCCTTACAAAAGGGA+AGG + Chr3:10903383-10903402 None:intergenic 35.0%
AAAATCATAGGGGAAGTCAT+AGG + Chr3:10907284-10907303 None:intergenic 35.0%
AAATCATAGGGGAAGTCATA+GGG + Chr3:10907283-10907302 None:intergenic 35.0%
AACTTCAATTCCTTGGTTGT+TGG - Chr3:10908011-10908030 MsG0380012100.01.T01:CDS 35.0%
AACTTTCTTAACTAGTGTCC+CGG + Chr3:10907418-10907437 None:intergenic 35.0%
AAGAAGGATGTTGAATGGAA+TGG - Chr3:10904241-10904260 MsG0380012100.01.T01:intron 35.0%
AAGGCGAAAAAAAGTAAGTG+AGG - Chr3:10903596-10903615 MsG0380012100.01.T01:intron 35.0%
AATCCCACACTCATTAAAAG+GGG + Chr3:10905238-10905257 None:intergenic 35.0%
AATGATAACTTAAGGGAGGT+TGG + Chr3:10907739-10907758 None:intergenic 35.0%
AATGTTGTTAGCCATTGTGA+AGG - Chr3:10904478-10904497 MsG0380012100.01.T01:intron 35.0%
AATTTAGTGCAAAGTAGCAC+TGG - Chr3:10905906-10905925 MsG0380012100.01.T01:intron 35.0%
ACAATATCTCACCTTCACAA+TGG + Chr3:10904492-10904511 None:intergenic 35.0%
AGTGCCAAAATGAGAAGATT+TGG - Chr3:10903753-10903772 MsG0380012100.01.T01:intron 35.0%
ATATGGTATTTCATGTGACG+TGG - Chr3:10905743-10905762 MsG0380012100.01.T01:CDS 35.0%
ATTGCAATCAATGTTCCTCA+TGG - Chr3:10902526-10902545 MsG0380012100.01.T01:intron 35.0%
ATTTAGTGCAAAGTAGCACT+GGG - Chr3:10905907-10905926 MsG0380012100.01.T01:intron 35.0%
CAATCCCACACTCATTAAAA+GGG + Chr3:10905239-10905258 None:intergenic 35.0%
CAATGCTCAAACAAGCTAAA+AGG + Chr3:10908119-10908138 None:intergenic 35.0%
CAATGGCTAACAACATTGTT+AGG + Chr3:10904475-10904494 None:intergenic 35.0%
CAGATCAGAATTCATACCAA+AGG + Chr3:10903418-10903437 None:intergenic 35.0%
CAGATTAGTAAACTGTAGTG+GGG - Chr3:10904946-10904965 MsG0380012100.01.T01:intron 35.0%
CAGTTTACACATATGACAAG+TGG - Chr3:10907892-10907911 MsG0380012100.01.T01:intron 35.0%
CTCAGATTAGTAAACTGTAG+TGG - Chr3:10904944-10904963 MsG0380012100.01.T01:intron 35.0%
GAACAATCGACATTTGTTTG+TGG - Chr3:10903565-10903584 MsG0380012100.01.T01:intron 35.0%
GAAGAAGATAGATGGAAGAA+AGG - Chr3:10902109-10902128 MsG0380012100.01.T01:CDS 35.0%
GAGAAAAATTCCGCATGATA+AGG + Chr3:10902600-10902619 None:intergenic 35.0%
GCAAACTTATCAAACACCAT+GGG - Chr3:10904916-10904935 MsG0380012100.01.T01:intron 35.0%
GCCTAGCAAATATTTAAGTG+TGG - Chr3:10903179-10903198 MsG0380012100.01.T01:intron 35.0%
GTACATTCAAAGTCATGTCT+GGG + Chr3:10905106-10905125 None:intergenic 35.0%
GTGCCAAAATGAGAAGATTT+GGG - Chr3:10903754-10903773 MsG0380012100.01.T01:intron 35.0%
GTTCATCAAGTTTCAGCATA+TGG + Chr3:10902660-10902679 None:intergenic 35.0%
TCAATCCCACACTCATTAAA+AGG + Chr3:10905240-10905259 None:intergenic 35.0%
TCTTGGATGCTTCTAATGTT+TGG - Chr3:10904845-10904864 MsG0380012100.01.T01:intron 35.0%
TGCAAACTTATCAAACACCA+TGG - Chr3:10904915-10904934 MsG0380012100.01.T01:intron 35.0%
TGCAGATAACAGGAATTGAA+AGG - Chr3:10902852-10902871 MsG0380012100.01.T01:intron 35.0%
TGGTATAAGGAAATGGATCA+AGG + Chr3:10904779-10904798 None:intergenic 35.0%
TGTACATTCAAAGTCATGTC+TGG + Chr3:10905107-10905126 None:intergenic 35.0%
TGTTTATGGTAGACCTATCT+AGG - Chr3:10907025-10907044 MsG0380012100.01.T01:intron 35.0%
TTGAGTGCCAAAAACAAACA+TGG + Chr3:10908082-10908101 None:intergenic 35.0%
TTGGTATGAATTCTGATCTG+TGG - Chr3:10903418-10903437 MsG0380012100.01.T01:intron 35.0%
TTTACACATATGACAAGTGG+TGG - Chr3:10907895-10907914 MsG0380012100.01.T01:intron 35.0%
TTTATGAGTCTTAGACCTGA+TGG - Chr3:10902346-10902365 MsG0380012100.01.T01:intron 35.0%
TTTGTTTGTGGGATGTGATA+AGG - Chr3:10903577-10903596 MsG0380012100.01.T01:intron 35.0%
! AGTTTTACAGTTCAGCAGTA+CGG - Chr3:10903928-10903947 MsG0380012100.01.T01:intron 35.0%
! CGTTTTGTGGTATAAGGAAA+TGG + Chr3:10904786-10904805 None:intergenic 35.0%
! CTTATCAGCAATGCTCTAAA+AGG + Chr3:10905300-10905319 None:intergenic 35.0%
! CTTCCCAAATCTTCTCATTT+TGG + Chr3:10903760-10903779 None:intergenic 35.0%
! CTTTTACTGCTCTATGCTAA+CGG - Chr3:10904329-10904348 MsG0380012100.01.T01:intron 35.0%
! GCTTTTAAATTTGTGGATGC+TGG - Chr3:10902423-10902442 MsG0380012100.01.T01:intron 35.0%
! GTATCAGAGGTTAAGTTTTC+AGG + Chr3:10906768-10906787 None:intergenic 35.0%
! GTTCAACTTTTGCTTCGTTA+TGG - Chr3:10907804-10907823 MsG0380012100.01.T01:intron 35.0%
! TACTAATATGGAGCACCATA+AGG - Chr3:10903694-10903713 MsG0380012100.01.T01:intron 35.0%
! TAGCAAAGTCAATAGCCTTA+TGG + Chr3:10903712-10903731 None:intergenic 35.0%
! TATGAGGGTGTAACATATTC+GGG + Chr3:10906944-10906963 None:intergenic 35.0%
! TCATTTCCTTTTGTCTGGTA+TGG - Chr3:10905354-10905373 MsG0380012100.01.T01:intron 35.0%
! TGTTGTTGTCTCTTTGTTTG+TGG - Chr3:10902972-10902991 MsG0380012100.01.T01:intron 35.0%
! TTGACTTTGCTATGATGATG+TGG - Chr3:10903720-10903739 MsG0380012100.01.T01:intron 35.0%
! TTTTCAACTCAAACTCAAGG+TGG - Chr3:10904883-10904902 MsG0380012100.01.T01:intron 35.0%
! TTTTCTTCTCTGATCAACAC+TGG + Chr3:10904532-10904551 None:intergenic 35.0%
!! AGAACAAAGTTTTGATGAGC+AGG + Chr3:10905809-10905828 None:intergenic 35.0%
!! CACATTATTGGTTCCTTCAT+TGG - Chr3:10906496-10906515 MsG0380012100.01.T01:intron 35.0%
!! CTACATTTTGATCAGCAACA+GGG - Chr3:10904990-10905009 MsG0380012100.01.T01:intron 35.0%
!! GAACTTGATTTGCAGATAAC+AGG - Chr3:10902842-10902861 MsG0380012100.01.T01:intron 35.0%
!! TATAATGTCCTCTAGAGTTC+CGG + Chr3:10904043-10904062 None:intergenic 35.0%
!! TCTACATTTTGATCAGCAAC+AGG - Chr3:10904989-10905008 MsG0380012100.01.T01:intron 35.0%
!!! CTTTTAGCTTGTTTGAGCAT+TGG - Chr3:10908117-10908136 MsG0380012100.01.T01:CDS 35.0%
!!! TTGTTTTTGGCACTCAAAGT+TGG - Chr3:10908085-10908104 MsG0380012100.01.T01:CDS 35.0%
AAAACCTTTGCTTGAAGCTG+TGG - Chr3:10903488-10903507 MsG0380012100.01.T01:intron 40.0%
AACAACATATCCTATGCCAG+TGG + Chr3:10906367-10906386 None:intergenic 40.0%
AATATGGCTCCTTTGTACCT+GGG - Chr3:10907945-10907964 MsG0380012100.01.T01:intron 40.0%
AATATTCCAACACTGACGAG+TGG - Chr3:10906799-10906818 MsG0380012100.01.T01:intron 40.0%
AATTCCTTGGTTGTTGGACA+AGG - Chr3:10908017-10908036 MsG0380012100.01.T01:CDS 40.0%
ACTTTCTTAACTAGTGTCCC+GGG + Chr3:10907417-10907436 None:intergenic 40.0%
AGACCTTCATACGGAACAAA+TGG + Chr3:10904395-10904414 None:intergenic 40.0%
AGTCACAGTAGCCATTATGA+GGG + Chr3:10906959-10906978 None:intergenic 40.0%
AGTTGTAGGGAAAAGTTGCA+TGG - Chr3:10903080-10903099 MsG0380012100.01.T01:intron 40.0%
ATAGATGGAAGAAAGGACCT+TGG - Chr3:10902116-10902135 MsG0380012100.01.T01:CDS 40.0%
ATATTCCAACACTGACGAGT+GGG - Chr3:10906800-10906819 MsG0380012100.01.T01:intron 40.0%
ATTGAGTATGTCAAGCAGCA+TGG - Chr3:10902163-10902182 MsG0380012100.01.T01:CDS 40.0%
GAACCATTTGTTCCGTATGA+AGG - Chr3:10904389-10904408 MsG0380012100.01.T01:intron 40.0%
GCGAAAAAAAGTAAGTGAGG+CGG - Chr3:10903599-10903618 MsG0380012100.01.T01:intron 40.0%
GGCCCTCCATATATAAGATT+TGG - Chr3:10902873-10902892 MsG0380012100.01.T01:intron 40.0%
GTGTAACATATTCGGGAAGT+AGG + Chr3:10906937-10906956 None:intergenic 40.0%
TAATATGGCTCCTTTGTACC+TGG - Chr3:10907944-10907963 MsG0380012100.01.T01:intron 40.0%
TACATGCCATACCAGACAAA+AGG + Chr3:10905363-10905382 None:intergenic 40.0%
TATAACGCATACCTCTTTGC+AGG + Chr3:10904276-10904295 None:intergenic 40.0%
TATTGTCAGTATGCCATCCA+TGG + Chr3:10905775-10905794 None:intergenic 40.0%
TCAATCTCAGATCTAGTGCA+CGG + Chr3:10904219-10904238 None:intergenic 40.0%
TGAGAAGATTTGGGAAGACA+AGG - Chr3:10903763-10903782 MsG0380012100.01.T01:intron 40.0%
TGATGGAAGGAAACATTGGA+TGG - Chr3:10902077-10902096 MsG0380012100.01.T01:CDS 40.0%
TTAACCTTGTCCAACAACCA+AGG + Chr3:10908024-10908043 None:intergenic 40.0%
TTTAGTGCAAAGTAGCACTG+GGG - Chr3:10905908-10905927 MsG0380012100.01.T01:intron 40.0%
TTTGTGCTTACTGCTACATC+TGG - Chr3:10904141-10904160 MsG0380012100.01.T01:intron 40.0%
! AACTGCTCTAGACCTTCATA+CGG + Chr3:10904404-10904423 None:intergenic 40.0%
! ACCAAACCTTCCCTTTTGTA+AGG - Chr3:10903374-10903393 MsG0380012100.01.T01:intron 40.0%
! AGTAAACTGTAGTGGGGAAA+CGG - Chr3:10904952-10904971 MsG0380012100.01.T01:intron 40.0%
! ATGTCCCCTTTTAATGAGTG+TGG - Chr3:10905231-10905250 MsG0380012100.01.T01:intron 40.0%
! CCAAACCTTCCCTTTTGTAA+GGG - Chr3:10903375-10903394 MsG0380012100.01.T01:intron 40.0%
! TCGGACAGAACAACTTTTCT+TGG + Chr3:10906277-10906296 None:intergenic 40.0%
! TGTCCCCTTTTAATGAGTGT+GGG - Chr3:10905232-10905251 MsG0380012100.01.T01:intron 40.0%
! TTTTGCTTCGTTATGGCAGA+AGG - Chr3:10907811-10907830 MsG0380012100.01.T01:intron 40.0%
!! ATGGAGTTGGTATGTGTATC+CGG - Chr3:10904021-10904040 MsG0380012100.01.T01:intron 40.0%
!! TTTTTGGCACTCAAAGTTGG+TGG - Chr3:10908088-10908107 MsG0380012100.01.T01:CDS 40.0%
!!! GCATCGGTTCATTTTTGTCA+TGG - Chr3:10904424-10904443 MsG0380012100.01.T01:intron 40.0%
AAAAAAGTAAGTGAGGCGGC+AGG - Chr3:10903603-10903622 MsG0380012100.01.T01:intron 45.0%
AAAAAGTAAGTGAGGCGGCA+GGG - Chr3:10903604-10903623 MsG0380012100.01.T01:intron 45.0%
AAAGTTAACTAGTGCCCCCA+AGG + Chr3:10907549-10907568 None:intergenic 45.0%
AACATGTCATCTCCTCTGCA+CGG - Chr3:10904654-10904673 MsG0380012100.01.T01:intron 45.0%
AGCTGTGGACAAGATGAAAG+AGG - Chr3:10903503-10903522 MsG0380012100.01.T01:intron 45.0%
AGTGGCAGAAACTCGATTGT+GGG - Chr3:10906860-10906879 MsG0380012100.01.T01:intron 45.0%
ATGTGTATCCGGAACTCTAG+AGG - Chr3:10904032-10904051 MsG0380012100.01.T01:intron 45.0%
CAAAGAGACAACAACAGACC+AGG + Chr3:10902968-10902987 None:intergenic 45.0%
CAGTCACAGTAGCCATTATG+AGG + Chr3:10906960-10906979 None:intergenic 45.0%
CCCTTACAAAAGGGAAGGTT+TGG + Chr3:10903378-10903397 None:intergenic 45.0%
CGTTGGAAGTGAAATCTGAC+TGG + Chr3:10906338-10906357 None:intergenic 45.0%
CTCATAATGGCTACTGTGAC+TGG - Chr3:10906958-10906977 MsG0380012100.01.T01:intron 45.0%
CTGGTATGGCATGTAGAACA+TGG - Chr3:10905368-10905387 MsG0380012100.01.T01:intron 45.0%
CTTTCTTAACTAGTGTCCCG+GGG + Chr3:10907416-10907435 None:intergenic 45.0%
GAAGGGATGATCATTGCTCT+TGG - Chr3:10904828-10904847 MsG0380012100.01.T01:intron 45.0%
GCTGTGGACAAGATGAAAGA+GGG - Chr3:10903504-10903523 MsG0380012100.01.T01:intron 45.0%
GGAAAACCTCAGTAAAGTGG+AGG - Chr3:10902817-10902836 MsG0380012100.01.T01:intron 45.0%
GGAGGAAAACCTCAGTAAAG+TGG - Chr3:10902814-10902833 MsG0380012100.01.T01:intron 45.0%
GGATAGAAACTCCTGCAAAG+AGG - Chr3:10904262-10904281 MsG0380012100.01.T01:intron 45.0%
GTAGGGAAAAGTTGCATGGT+AGG - Chr3:10903084-10903103 MsG0380012100.01.T01:intron 45.0%
GTATTTCATGTGACGTGGTG+TGG - Chr3:10905748-10905767 MsG0380012100.01.T01:CDS 45.0%
GTTCTTCCTCCACTTTACTG+AGG + Chr3:10902826-10902845 None:intergenic 45.0%
TAACCTCTGATACGTTCGAC+TGG - Chr3:10906775-10906794 MsG0380012100.01.T01:intron 45.0%
TAGTACGCTAGCTCAGTGTT+GGG - Chr3:10905705-10905724 MsG0380012100.01.T01:intron 45.0%
TAGTGGCAGAAACTCGATTG+TGG - Chr3:10906859-10906878 MsG0380012100.01.T01:intron 45.0%
TATGTCAAGCAGCATGGTGA+AGG - Chr3:10902169-10902188 MsG0380012100.01.T01:CDS 45.0%
TCACGCAATGGAAGGAGATT+AGG - Chr3:10903824-10903843 MsG0380012100.01.T01:intron 45.0%
TCATCTCCTACTCACAGTAG+TGG - Chr3:10906842-10906861 MsG0380012100.01.T01:intron 45.0%
TTACCAGTCGAACGTATCAG+AGG + Chr3:10906781-10906800 None:intergenic 45.0%
TTACTGCTCTATGCTAACGG+AGG - Chr3:10904332-10904351 MsG0380012100.01.T01:intron 45.0%
TTAGTACGCTAGCTCAGTGT+TGG - Chr3:10905704-10905723 MsG0380012100.01.T01:intron 45.0%
TTGTCCACAGCTTCAAGCAA+AGG + Chr3:10903495-10903514 None:intergenic 45.0%
TTGTCTTCCTCAGTAGTCCA+AGG + Chr3:10902136-10902155 None:intergenic 45.0%
TTTACAGTTCAGCAGTACGG+TGG - Chr3:10903931-10903950 MsG0380012100.01.T01:intron 45.0%
TTTCTGCCACTACTGTGAGT+AGG + Chr3:10906851-10906870 None:intergenic 45.0%
! AAGGTCTAGAGCAGTTGCAT+CGG - Chr3:10904408-10904427 MsG0380012100.01.T01:intron 45.0%
! ACTAATCTGAGACAGACCCA+TGG + Chr3:10904935-10904954 None:intergenic 45.0%
! GGCTACATGACTTGCACTTA+GGG - Chr3:10904752-10904771 MsG0380012100.01.T01:intron 45.0%
! GTAAACTGTAGTGGGGAAAC+GGG - Chr3:10904953-10904972 MsG0380012100.01.T01:intron 45.0%
! GTGTGGGATTGAGATCCTTT+TGG - Chr3:10905248-10905267 MsG0380012100.01.T01:intron 45.0%
!! AAGCATTGATCCTGTGTGCA+AGG + Chr3:10905632-10905651 None:intergenic 45.0%
!! ACGCGAATGGATTGGATTCA+TGG - Chr3:10907835-10907854 MsG0380012100.01.T01:intron 45.0%
!! AGTCTCCTTAACTTGTGCCT+TGG - Chr3:10907529-10907548 MsG0380012100.01.T01:intron 45.0%
!! ATGTAGTGTCGGTTTCTCAC+TGG + Chr3:10906714-10906733 None:intergenic 45.0%
!! CGCGAATGGATTGGATTCAT+GGG - Chr3:10907836-10907855 MsG0380012100.01.T01:intron 45.0%
!! GCGAATGGATTGGATTCATG+GGG - Chr3:10907837-10907856 MsG0380012100.01.T01:intron 45.0%
!! GGCTTTGGGGAATGATATTG+TGG + Chr3:10905611-10905630 None:intergenic 45.0%
!! GTCTCCTTAACTTGTGCCTT+GGG - Chr3:10907530-10907549 MsG0380012100.01.T01:intron 45.0%
!! TCTCCTTAACTTGTGCCTTG+GGG - Chr3:10907531-10907550 MsG0380012100.01.T01:intron 45.0%
!! AAAAAATTATATTAATGAAA+CGG + Chr3:10907620-10907639 None:intergenic 5.0%
!! AATAAATTTATAAAAAAAGA+TGG - Chr3:10906082-10906101 MsG0380012100.01.T01:intron 5.0%
!! TAAAATTAAATAAAGAAAAA+AGG + Chr3:10905687-10905706 None:intergenic 5.0%
!! TGTTAATTATTAAAAATAAT+TGG + Chr3:10906169-10906188 None:intergenic 5.0%
AACAGACCAGGTAGGAGTCA+AGG + Chr3:10902956-10902975 None:intergenic 50.0%
AACCTTAGAAACCCGTGCAG+AGG + Chr3:10904669-10904688 None:intergenic 50.0%
AACGTAGCAACCACTGGCAT+AGG - Chr3:10906354-10906373 MsG0380012100.01.T01:intron 50.0%
AACTCTGTCTCTAGGCTTGC+AGG - Chr3:10902199-10902218 MsG0380012100.01.T01:CDS 50.0%
ACATGTCATCTCCTCTGCAC+GGG - Chr3:10904655-10904674 MsG0380012100.01.T01:intron 50.0%
ACTTCCAACGTAGCAACCAC+TGG - Chr3:10906348-10906367 MsG0380012100.01.T01:intron 50.0%
AGCAGACTGTAGCAGCGAAT+AGG - Chr3:10903848-10903867 MsG0380012100.01.T01:intron 50.0%
AGTACGGTGGATGCCACTAA+TGG - Chr3:10903944-10903963 MsG0380012100.01.T01:intron 50.0%
ATCATGTTAACCCGTGTCCC+CGG - Chr3:10907396-10907415 MsG0380012100.01.T01:intron 50.0%
ATCCTGTGTGCAAGGCTTTG+GGG + Chr3:10905624-10905643 None:intergenic 50.0%
CGAGACTATCACGCAATGGA+AGG - Chr3:10903816-10903835 MsG0380012100.01.T01:intron 50.0%
GAAAGGACCTTGGACTACTG+AGG - Chr3:10902126-10902145 MsG0380012100.01.T01:CDS 50.0%
GAGACAACAACAGACCAGGT+AGG + Chr3:10902964-10902983 None:intergenic 50.0%
GATCCTGTGTGCAAGGCTTT+GGG + Chr3:10905625-10905644 None:intergenic 50.0%
GCAGATGGAACTCTGTCTCT+AGG - Chr3:10902191-10902210 MsG0380012100.01.T01:CDS 50.0%
GTTGCGAAGCGAGAGAAAGA+GGG - Chr3:10905583-10905602 MsG0380012100.01.T01:intron 50.0%
TATGCCAGTGGTTGCTACGT+TGG + Chr3:10906355-10906374 None:intergenic 50.0%
TCCACACAACCCAGGTACAA+AGG + Chr3:10907957-10907976 None:intergenic 50.0%
TCCTTTGTACCTGGGTTGTG+TGG - Chr3:10907953-10907972 MsG0380012100.01.T01:intron 50.0%
TCGGGAAGTAGGTCAGATTG+TGG + Chr3:10906926-10906945 None:intergenic 50.0%
TGATCCTGTGTGCAAGGCTT+TGG + Chr3:10905626-10905645 None:intergenic 50.0%
TGCACGAGACTATCACGCAA+TGG - Chr3:10903812-10903831 MsG0380012100.01.T01:intron 50.0%
TGTTGCGAAGCGAGAGAAAG+AGG - Chr3:10905582-10905601 MsG0380012100.01.T01:intron 50.0%
! CAGAAGGTACGCGAATGGAT+TGG - Chr3:10907827-10907846 MsG0380012100.01.T01:intron 50.0%
! GGGCTACATGACTTGCACTT+AGG - Chr3:10904751-10904770 MsG0380012100.01.T01:intron 50.0%
! TATGGCAGAAGGTACGCGAA+TGG - Chr3:10907822-10907841 MsG0380012100.01.T01:intron 50.0%
!! CTCCTTAACTTGTGCCTTGG+GGG - Chr3:10907532-10907551 MsG0380012100.01.T01:intron 50.0%
!! TTTCAAGAAGAGCGCTGCGA+TGG - Chr3:10904002-10904021 MsG0380012100.01.T01:intron 50.0%
AGCAGCATGGTGAAGGCAGA+TGG - Chr3:10902176-10902195 MsG0380012100.01.T01:CDS 55.0%
ATGTGACGTGGTGTGGTCCA+TGG - Chr3:10905755-10905774 MsG0380012100.01.T01:CDS 55.0%
CACATCCCACTCGTCAGTGT+TGG + Chr3:10906808-10906827 None:intergenic 55.0%
CGGTGGATGCCACTAATGGT+AGG - Chr3:10903948-10903967 MsG0380012100.01.T01:intron 55.0%
CTCCTCTGCACGGGTTTCTA+AGG - Chr3:10904664-10904683 MsG0380012100.01.T01:intron 55.0%
GGAGTCAAGGCCAATGACCT+TGG + Chr3:10902943-10902962 None:intergenic 55.0%
TAACTAGTGTCCCGGGGACA+CGG + Chr3:10907410-10907429 None:intergenic 55.0%
TCATGTTAACCCGTGTCCCC+GGG - Chr3:10907397-10907416 MsG0380012100.01.T01:intron 55.0%
TCGTTCGTTCCACACAACCC+AGG + Chr3:10907965-10907984 None:intergenic 55.0%
TGCCCCCAAGGCACAAGTTA+AGG + Chr3:10907537-10907556 None:intergenic 55.0%
TTCCCCAAAGCCTTGCACAC+AGG - Chr3:10905619-10905638 MsG0380012100.01.T01:intron 55.0%
TTCTGTGGCTGCAGTGACTG+TGG - Chr3:10903454-10903473 MsG0380012100.01.T01:intron 55.0%
!! CATTGGCCTTGACTCCTACC+TGG - Chr3:10902947-10902966 MsG0380012100.01.T01:intron 55.0%
AACTAGTGTCCCGGGGACAC+GGG + Chr3:10907409-10907428 None:intergenic 60.0%
AATCCACCCCGTGCGAAGCA+CGG - Chr3:10907179-10907198 MsG0380012100.01.T01:intron 60.0%
CTGTCAACCCGTGCTTCGCA+CGG + Chr3:10907190-10907209 None:intergenic 60.0%
GACGTGGTGTGGTCCATGGA+TGG - Chr3:10905759-10905778 MsG0380012100.01.T01:CDS 60.0%
TGTCAACCCGTGCTTCGCAC+GGG + Chr3:10907189-10907208 None:intergenic 60.0%
!! GAAGAGCGCTGCGATGGAGT+TGG - Chr3:10904008-10904027 MsG0380012100.01.T01:intron 60.0%
AAGTGAGGCGGCAGGGCTGT+GGG - Chr3:10903611-10903630 MsG0380012100.01.T01:intron 65.0%
ATCCACCCCGTGCGAAGCAC+GGG - Chr3:10907180-10907199 MsG0380012100.01.T01:intron 65.0%
GTCAACCCGTGCTTCGCACG+GGG + Chr3:10907188-10907207 None:intergenic 65.0%
TAAGTGAGGCGGCAGGGCTG+TGG - Chr3:10903610-10903629 MsG0380012100.01.T01:intron 65.0%
AACCCGTGCTTCGCACGGGG+TGG + Chr3:10907185-10907204 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
Chr3 gene 10902076 10908143 10902076 ID=MsG0380012100.01;Name=MsG0380012100.01
Chr3 mRNA 10902076 10908143 10902076 ID=MsG0380012100.01.T01;Parent=MsG0380012100.01;Name=MsG0380012100.01.T01;_AED=0.50;_eAED=0.81;_QI=0|0|0|1|1|1|4|0|213
Chr3 exon 10907999 10908143 10907999 ID=MsG0380012100.01.T01:exon:277;Parent=MsG0380012100.01.T01
Chr3 exon 10907199 10907329 10907199 ID=MsG0380012100.01.T01:exon:276;Parent=MsG0380012100.01.T01
Chr3 exon 10905720 10905836 10905720 ID=MsG0380012100.01.T01:exon:275;Parent=MsG0380012100.01.T01
Chr3 exon 10902076 10902324 10902076 ID=MsG0380012100.01.T01:exon:274;Parent=MsG0380012100.01.T01
Chr3 CDS 10907999 10908143 10907999 ID=MsG0380012100.01.T01:cds;Parent=MsG0380012100.01.T01
Chr3 CDS 10907199 10907329 10907199 ID=MsG0380012100.01.T01:cds;Parent=MsG0380012100.01.T01
Chr3 CDS 10905720 10905836 10905720 ID=MsG0380012100.01.T01:cds;Parent=MsG0380012100.01.T01
Chr3 CDS 10902076 10902324 10902076 ID=MsG0380012100.01.T01:cds;Parent=MsG0380012100.01.T01
Gene Sequence

>MsG0380012100.01.T01

ATGATGGAAGGAAACATTGGATGGAGTGTAATAGAAGAAGATAGATGGAAGAAAGGACCTTGGACTACTGAGGAAGACAAATTTCTCATTGAGTATGTCAAGCAGCATGGTGAAGGCAGATGGAACTCTGTCTCTAGGCTTGCAGATTTGGACTTTGGTTTTGGATACTTCAAGATAGCAGAAACTATAAAAGAACCAAGGTCATTGGCCTTGACTCCTACCTGGTCTGTTGTTGTCTCTTTGTTTGTGGATCACTCAATTAATCGTTTAAGCAATGGTTATGAACCATTTGTTCCGTATGAAGGTCTAGAGCAGTTGCATCGGTTCATTTTTGTCATGGCGATAACACATGTATCTTACAGTCGCCTAACAATGTTGTTAGCCATTGTGAAGTTTACACATATGACAAGTGGTGGTAAAGCTAACCGTTTGTTTTTGCAACTAATATGGCTCCTTTGTACCTGGGTTGTGTGGAACGAACGAAACAATCGTCTATTTAATCATGTTGTAACTTCAATTCCTTGGTTGTTGGACAAGGTTAAATTGTTATCTTTAGGTTGGGTGAAAGCTAAAACAACCATGTTTGTTTTTGGCACTCAAAGTTGGTGGTCAAGCCTTTTAGCTTGTTTGAGCATTGGCTAA
Protein sequence

>MsG0380012100.01.T01

MMEGNIGWSVIEEDRWKKGPWTTEEDKFLIEYVKQHGEGRWNSVSRLADLDFGFGYFKIAETIKEPRSLALTPTWSVVVSLFVDHSINRLSNGYEPFVPYEGLEQLHRFIFVMAITHVSYSRLTMLLAIVKFTHMTSGGKANRLFLQLIWLLCTWVVWNERNNRLFNHVVTSIPWLLDKVKLLSLGWVKAKTTMFVFGTQSWWSSLLACLSIG*