AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0380012456.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380012456.01.T01 MTR_3g023750 86.772 378 16 2 11 354 16 393 0.0 647
MsG0380012456.01.T01 MTR_5g097950 60.262 229 61 2 156 354 268 496 1.93e-80 254
MsG0380012456.01.T01 MTR_5g097950 46.230 305 122 8 75 346 37 332 4.90e-65 214
MsG0380012456.01.T01 MTR_5g097950 60.262 229 61 2 156 354 304 532 2.97e-80 254
MsG0380012456.01.T01 MTR_5g097950 46.230 305 122 8 75 346 73 368 4.91e-65 215
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380012456.01.T01 AT5G61190 26.800 250 123 8 112 344 289 495 9.85e-16 79.3
MsG0380012456.01.T01 AT5G61190 36.066 122 60 3 231 352 299 402 8.68e-14 73.2
MsG0380012456.01.T01 AT5G61190 32.215 149 83 3 204 352 272 402 8.03e-14 73.2
MsG0380012456.01.T01 AT5G61190 32.215 149 83 3 204 352 178 308 9.65e-14 73.2
MsG0380012456.01.T01 AT5G61190 32.215 149 83 3 204 352 178 308 9.65e-14 73.2
MsG0380012456.01.T01 AT5G61190 32.215 149 83 3 204 352 272 402 9.67e-14 73.2
MsG0380012456.01.T01 AT5G61190 32.215 149 83 3 204 352 272 402 9.89e-14 73.2
MsG0380012456.01.T01 AT5G61190 32.215 149 83 3 204 352 272 402 1.01e-13 73.2
MsG0380012456.01.T01 AT5G61190 32.215 149 83 3 204 352 272 402 1.05e-13 72.8
MsG0380012456.01.T01 AT5G61190 32.215 149 83 3 204 352 272 402 1.07e-13 72.8
MsG0380012456.01.T01 AT5G61190 32.215 149 83 3 204 352 272 402 1.10e-13 72.8
MsG0380012456.01.T01 AT5G61190 32.215 149 83 3 204 352 272 402 1.10e-13 72.8

Find 93 sgRNAs with CRISPR-Local

Find 297 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCACCATAGCAGCATGTTTC+TGG 0.170828 3:+16758780 None:intergenic
TCTGATGCCTTCTTTGGTTT+TGG 0.255884 3:+16758929 None:intergenic
ACTTATTACTGTTTGTGTTT+TGG 0.270098 3:-16758604 MsG0380012456.01.T01:three_prime_UTR
TCAAGTTCTGATGCCTTCTT+TGG 0.279559 3:+16758923 None:intergenic
GCCACCGCCAATACTTTAAT+CGG 0.330296 3:-16758980 MsG0380012456.01.T01:CDS
GCAGAATCAACCTGTTTCTT+AGG 0.337690 3:+16761044 None:intergenic
TGGGAGGTGTAAAGAGAAAC+AGG 0.338861 3:+16763032 None:intergenic
ATGCAGTTTCTCATTGCTAA+TGG 0.344909 3:-16758682 MsG0380012456.01.T01:three_prime_UTR
AAGTTCCTGTAACAAGTAAA+AGG 0.352035 3:+16758623 None:intergenic
AACCAACAGATTATCAGAAT+TGG 0.358398 3:-16763010 MsG0380012456.01.T01:CDS
CGCTTGAATTCGGCAATAGA+TGG 0.359328 3:+16759190 None:intergenic
TTGTTGTTGAGGGTACATTT+TGG 0.361006 3:+16763178 None:intergenic
AACACCGTTACGCTTGAATT+CGG 0.361255 3:+16759180 None:intergenic
AAGCTTTGGTGACTTTGGTT+TGG 0.371601 3:+16761258 None:intergenic
CACGCAGAAGGTAAACTTGC+AGG 0.393751 3:+16761338 None:intergenic
GCAATCCGAGCCTAAGAAAC+AGG 0.404268 3:-16761054 MsG0380012456.01.T01:CDS
TCTCAAAGCTTTGGTGACTT+TGG 0.404347 3:+16761253 None:intergenic
ATACAAGGACAAGCGTTAAT+TGG 0.404953 3:-16761089 MsG0380012456.01.T01:CDS
AGGGTTGTTGTTGTTGCTGC+TGG 0.409176 3:+16763132 None:intergenic
TTGTTGCTGCTGGAAATTGT+AGG 0.411429 3:+16763142 None:intergenic
ACATGGCCACCACAAATTTA+CGG 0.411957 3:-16761308 MsG0380012456.01.T01:CDS
CACTTCACATCTCAAAGCTT+TGG 0.420423 3:+16761244 None:intergenic
GGAGGATGAAGTGAAGGATC+GGG 0.426441 3:+16763095 None:intergenic
ATCGGGGAATGATGAATAGT+AGG 0.433805 3:+16763112 None:intergenic
GCAAGATTAATTGTAACAGC+AGG 0.443520 3:-16759096 MsG0380012456.01.T01:CDS
AATTCTGATAATCTGTTGGT+TGG 0.449153 3:+16763012 None:intergenic
GTCTCATTGCCGTAAATTTG+TGG 0.452046 3:+16761299 None:intergenic
GTTGCCTTGATGTCTAATAA+TGG 0.452518 3:-16759220 MsG0380012456.01.T01:CDS
TAAAGTATTGGCGGTGGCGG+TGG 0.459433 3:+16758985 None:intergenic
TGTTATCTAGACTTTGAGAC+AGG 0.465251 3:-16758714 MsG0380012456.01.T01:three_prime_UTR
ATCAACCTGTTTCTTAGGCT+CGG 0.472485 3:+16761049 None:intergenic
GGTGAAAATTGAAAACTGTC+TGG 0.474169 3:+16758810 None:intergenic
ATTCTGATAATCTGTTGGTT+GGG 0.474326 3:+16763013 None:intergenic
TTGTGGCCCGATTAAAGTAT+TGG 0.478867 3:+16758973 None:intergenic
CTTCTAATATTGCAGGCTGT+TGG 0.480500 3:-16761386 MsG0380012456.01.T01:intron
GGCTCGGATTGCTTGACTAC+AGG 0.482010 3:+16761065 None:intergenic
TTTGCAAGTGGGTCAGTGCC+AGG 0.495030 3:+16763074 None:intergenic
TCGGGGAATGATGAATAGTA+GGG 0.499824 3:+16763113 None:intergenic
GAGCTTGATATTGTTGTTGA+GGG 0.501352 3:+16763168 None:intergenic
TGAGCTTGATATTGTTGTTG+AGG 0.506291 3:+16763167 None:intergenic
TTGGTGACTTTGGTTTGGTT+AGG 0.506602 3:+16761263 None:intergenic
TAAGAAACACTTGAAGAACT+TGG 0.514681 3:-16759047 MsG0380012456.01.T01:CDS
GAAGGAGGAGCTGCAGTTGA+TGG 0.516170 3:-16758872 MsG0380012456.01.T01:CDS
TATCTGATGGGTTCAGATTG+AGG 0.517150 3:+16762981 None:intergenic
ATCCAATTCTGATAATCTGT+TGG 0.517632 3:+16763008 None:intergenic
TCTTATGAAAGTCACATAGC+TGG 0.520481 3:-16761194 MsG0380012456.01.T01:CDS
GAATTCAAGCGTAACGGTGT+TGG 0.521387 3:-16759178 MsG0380012456.01.T01:CDS
CGATCAACCAAAACCAAAGA+AGG 0.523246 3:-16758936 MsG0380012456.01.T01:CDS
ACATGCTGCTATGGTGAAGA+AGG 0.523999 3:-16758774 MsG0380012456.01.T01:CDS
TTCGCATGAGATGCAATAGT+AGG 0.525742 3:+16761134 None:intergenic
CCACCGCCAATACTTTAATC+GGG 0.529234 3:-16758979 MsG0380012456.01.T01:CDS
TGTTGCTGCTGGAAATTGTA+GGG 0.532481 3:+16763143 None:intergenic
CTTCTGCGTGGAATGGTACA+TGG 0.535273 3:-16761325 MsG0380012456.01.T01:CDS
AAGAAGGCAGGGTCAGTCAC+TGG 0.535623 3:-16758758 MsG0380012456.01.T01:CDS
AATGCCATTATTAGACATCA+AGG 0.537375 3:+16759216 None:intergenic
ATCTACATTACACACTTAGC+TGG 0.537529 3:-16759070 MsG0380012456.01.T01:CDS
GCTGCTATGGTGAAGAAGGC+AGG 0.537781 3:-16758770 MsG0380012456.01.T01:CDS
AGGAGGATGAAGTGAAGGAT+CGG 0.538657 3:+16763094 None:intergenic
AAAAGCTGCTAAGAAAATCA+AGG 0.540668 3:-16759146 MsG0380012456.01.T01:CDS
CAGCATGTTTCTGGCCAACA+AGG 0.542850 3:+16758789 None:intergenic
ACTTACAAGATCATATCTGA+TGG 0.547707 3:+16762968 None:intergenic
AGTTTACCTTCTGCGTGGAA+TGG 0.550393 3:-16761332 MsG0380012456.01.T01:CDS
CAAGATTAATTGTAACAGCA+GGG 0.550872 3:-16759095 MsG0380012456.01.T01:CDS
AAAGATGTTGAATTTGCAAG+TGG 0.552202 3:+16763062 None:intergenic
GATCCTTCACTTCATCCTCC+TGG 0.560778 3:-16763092 MsG0380012456.01.T01:CDS
TGGCCCGATTAAAGTATTGG+CGG 0.561570 3:+16758976 None:intergenic
CCCGATTAAAGTATTGGCGG+TGG 0.562704 3:+16758979 None:intergenic
GATTAAAGTATTGGCGGTGG+CGG 0.568603 3:+16758982 None:intergenic
AATTTACGGCAATGAGACTA+CGG 0.572919 3:-16761294 MsG0380012456.01.T01:CDS
GAAACAGGTTGATTCTGCAA+CGG 0.579888 3:-16761039 MsG0380012456.01.T01:intron
TTGATGTCTAATAATGGCAT+TGG 0.582144 3:-16759214 MsG0380012456.01.T01:CDS
CTGATAATCTGTTGGTTGGG+AGG 0.583814 3:+16763016 None:intergenic
GTCAAAGAAACGTAAAGTTG+TGG 0.587310 3:-16758894 MsG0380012456.01.T01:CDS
ATCGGGCCACAAGAAAAGCC+AGG 0.590094 3:-16758962 MsG0380012456.01.T01:CDS
GTGCCAGGAGGATGAAGTGA+AGG 0.595047 3:+16763089 None:intergenic
ACTGACACAAGTAGTATACA+AGG 0.597057 3:-16761104 MsG0380012456.01.T01:CDS
TGGCCAGAAACATGCTGCTA+TGG 0.598112 3:-16758783 MsG0380012456.01.T01:CDS
CATGTACCATTCCACGCAGA+AGG 0.601401 3:+16761326 None:intergenic
CTGCTATGGTGAAGAAGGCA+GGG 0.613128 3:-16758769 MsG0380012456.01.T01:CDS
TCAAGGTTGCTCAATCTGCA+TGG 0.613642 3:-16759129 MsG0380012456.01.T01:CDS
CTTACAAGATCATATCTGAT+GGG 0.617080 3:+16762969 None:intergenic
AAGAAACGTAAAGTTGTGGA+AGG 0.617548 3:-16758890 MsG0380012456.01.T01:CDS
AAGATGTTGAATTTGCAAGT+GGG 0.632167 3:+16763063 None:intergenic
AAACGTAAAGTTGTGGAAGG+AGG 0.636655 3:-16758887 MsG0380012456.01.T01:CDS
TCATTGCCGTAAATTTGTGG+TGG 0.641593 3:+16761302 None:intergenic
CTGCAAGTTTACCTTCTGCG+TGG 0.655416 3:-16761337 MsG0380012456.01.T01:CDS
ATTAGCAATGAGAAACTGCA+TGG 0.657962 3:+16758684 None:intergenic
GAGGATGAAGTGAAGGATCG+GGG 0.663139 3:+16763096 None:intergenic
AATGTGCACTTTATGCAATG+TGG 0.676620 3:-16758843 MsG0380012456.01.T01:CDS
GTTATCTAGACTTTGAGACA+GGG 0.681460 3:-16758713 MsG0380012456.01.T01:three_prime_UTR
ATTGCCGAATTCAAGCGTAA+CGG 0.711887 3:-16759184 MsG0380012456.01.T01:CDS
GCAAGTGGGTCAGTGCCAGG+AGG 0.726366 3:+16763077 None:intergenic
GAGGTGTAAAGAGAAACAGG+AGG 0.834614 3:+16763035 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAATAAATAAATATCATATG+TGG - Chr3:16762160-16762179 MsG0380012456.01.T01:intron 10.0%
!!! AAAAACAATTTTTAAAAATG+TGG - Chr3:16760145-16760164 MsG0380012456.01.T01:intron 10.0%
!! AAAAGTGAGAATAATAAAAT+AGG - Chr3:16760272-16760291 MsG0380012456.01.T01:intron 15.0%
!! AAAGTGAGAATAATAAAATA+GGG - Chr3:16760273-16760292 MsG0380012456.01.T01:intron 15.0%
!! AATATTAAAAGGATGAAAAT+TGG - Chr3:16761041-16761060 MsG0380012456.01.T01:CDS 15.0%
!! ATACAAGAGAAATATTTAAT+TGG - Chr3:16761968-16761987 MsG0380012456.01.T01:intron 15.0%
!! CATATAATGTAAATAGAATT+GGG - Chr3:16760228-16760247 MsG0380012456.01.T01:intron 15.0%
!! TAATACAAATAATTGTCAAA+TGG - Chr3:16759957-16759976 MsG0380012456.01.T01:intron 15.0%
!! TATAATATCAATTGTTAATC+AGG - Chr3:16761714-16761733 MsG0380012456.01.T01:intron 15.0%
!! TCATATAATGTAAATAGAAT+TGG - Chr3:16760227-16760246 MsG0380012456.01.T01:intron 15.0%
!! TTAATACAAATAATGTCAAA+TGG - Chr3:16759704-16759723 MsG0380012456.01.T01:intron 15.0%
!!! ACTGTTATTTTTATCTTAAT+TGG - Chr3:16761105-16761124 MsG0380012456.01.T01:CDS 15.0%
!!! TTTTATTTTAATGTAAGTCA+TGG + Chr3:16761003-16761022 None:intergenic 15.0%
!! AAAAAATACTTGTTTGTTCA+AGG + Chr3:16762310-16762329 None:intergenic 20.0%
!! AAATTCAAAACCATAACATA+AGG + Chr3:16760323-16760342 None:intergenic 20.0%
!! AATTCAAAACAACAATCAAA+AGG + Chr3:16758845-16758864 None:intergenic 20.0%
!! AATTCAAAACCATAACATAA+GGG + Chr3:16760322-16760341 None:intergenic 20.0%
!! AGGTTATCTATATATACAAA+TGG + Chr3:16762118-16762137 None:intergenic 20.0%
!! ATTCAAAACAACAATCAAAA+GGG + Chr3:16758844-16758863 None:intergenic 20.0%
!! ATTTGAAAACTAAGATCAAA+AGG + Chr3:16759023-16759042 None:intergenic 20.0%
!! CATTTATTAATTAACTCTGT+AGG - Chr3:16761179-16761198 MsG0380012456.01.T01:CDS 20.0%
!! CTACAGAGTTAATTAATAAA+TGG + Chr3:16761181-16761200 None:intergenic 20.0%
!! TTTGAAAACTAAGATCAAAA+GGG + Chr3:16759022-16759041 None:intergenic 20.0%
!!! AATTACATTATCCTTTTGTA+AGG - Chr3:16760858-16760877 MsG0380012456.01.T01:intron 20.0%
!!! ACCAAGTAAAAATAGTTTTT+TGG - Chr3:16762206-16762225 MsG0380012456.01.T01:intron 20.0%
!!! CATAATTAGGGTTTTAAAAT+AGG - Chr3:16759489-16759508 MsG0380012456.01.T01:intron 20.0%
!!! CCAAGTAAAAATAGTTTTTT+GGG - Chr3:16762207-16762226 MsG0380012456.01.T01:intron 20.0%
!!! CTTAATTAGGGTTTTTAAAA+TGG - Chr3:16759253-16759272 MsG0380012456.01.T01:intron 20.0%
!!! GAATAAGTTGAATACAATAA+TGG + Chr3:16761946-16761965 None:intergenic 20.0%
!!! GGTTTTTAAAAGTTGAAAAA+AGG + Chr3:16761801-16761820 None:intergenic 20.0%
!!! GTTATGGTTTTGAATTTTAT+TGG - Chr3:16760326-16760345 MsG0380012456.01.T01:intron 20.0%
!!! TTTCTTATGTTTTTTCATCT+GGG - Chr3:16758884-16758903 MsG0380012456.01.T01:CDS 20.0%
!!! TTTTCTTATGTTTTTTCATC+TGG - Chr3:16758883-16758902 MsG0380012456.01.T01:CDS 20.0%
! AACAAAAAAAATGAGCAACT+TGG + Chr3:16762461-16762480 None:intergenic 25.0%
! ACAAAAAAAATGAGCAACTT+GGG + Chr3:16762460-16762479 None:intergenic 25.0%
! ATACAAATAATGTCAAATGG+TGG - Chr3:16759707-16759726 MsG0380012456.01.T01:intron 25.0%
! CTATATATACAAATGGAGTT+TGG + Chr3:16762111-16762130 None:intergenic 25.0%
! CTTATCTATAGATATACATC+CGG + Chr3:16762402-16762421 None:intergenic 25.0%
! GACAGAACAAGAATATTAAA+AGG - Chr3:16761030-16761049 MsG0380012456.01.T01:intron 25.0%
! GTATGAAAATAAGAGAATCA+TGG + Chr3:16761329-16761348 None:intergenic 25.0%
! TAACTGTTCAAATGTTTCAA+AGG + Chr3:16762138-16762157 None:intergenic 25.0%
! TTATCTATAGATATACATCC+GGG + Chr3:16762401-16762420 None:intergenic 25.0%
!! AACAACAATAGTCTTTTAGT+AGG - Chr3:16761658-16761677 MsG0380012456.01.T01:intron 25.0%
!! ACTTATTACTGTTTGTGTTT+TGG - Chr3:16763174-16763193 MsG0380012456.01.T01:CDS 25.0%
!! TCATAATTGGGGTTTTTAAA+TGG - Chr3:16759392-16759411 MsG0380012456.01.T01:intron 25.0%
!!! ATGAAATAGTGGATAAGTTT+TGG - Chr3:16759168-16759187 MsG0380012456.01.T01:CDS 25.0%
!!! CCCAAAAAACTATTTTTACT+TGG + Chr3:16762210-16762229 None:intergenic 25.0%
!!! TCATAGTTAGGGTTTTAAAA+TGG - Chr3:16759296-16759315 MsG0380012456.01.T01:intron 25.0%
!!! TTACATGCATTTTAGCTAAA+TGG + Chr3:16761205-16761224 None:intergenic 25.0%
!!! TTCATTTTAACGTAGTTGTT+TGG - Chr3:16758986-16759005 MsG0380012456.01.T01:CDS 25.0%
!!! TTTTAAAATGGACATGATTG+TGG - Chr3:16759265-16759284 MsG0380012456.01.T01:intron 25.0%
!!! TTTTGGGTTCATAATTTTGA+CGG - Chr3:16762223-16762242 MsG0380012456.01.T01:intron 25.0%
!!! TTTTGTTGTTTTACCCTATT+GGG - Chr3:16762474-16762493 MsG0380012456.01.T01:intron 25.0%
!!! TTTTTGTTGTTTTACCCTAT+TGG - Chr3:16762473-16762492 MsG0380012456.01.T01:intron 25.0%
AAAAGCTGCTAAGAAAATCA+AGG - Chr3:16762632-16762651 MsG0380012456.01.T01:intron 30.0%
AAAGATGTTGAATTTGCAAG+TGG + Chr3:16758719-16758738 None:intergenic 30.0%
AACAATGAGGACCTTATATA+CGG - Chr3:16762247-16762266 MsG0380012456.01.T01:intron 30.0%
AACACAACACTAAACTCATT+TGG + Chr3:16761473-16761492 None:intergenic 30.0%
AACCAACAGATTATCAGAAT+TGG - Chr3:16758768-16758787 MsG0380012456.01.T01:CDS 30.0%
AAGAAGAAGAAACATACAAG+TGG + Chr3:16759896-16759915 None:intergenic 30.0%
AAGATGAATGATGATAGTCA+GGG - Chr3:16760172-16760191 MsG0380012456.01.T01:intron 30.0%
AAGATGTTGAATTTGCAAGT+GGG + Chr3:16758718-16758737 None:intergenic 30.0%
AAGTTCCTGTAACAAGTAAA+AGG + Chr3:16763158-16763177 None:intergenic 30.0%
AATGCCATTATTAGACATCA+AGG + Chr3:16762565-16762584 None:intergenic 30.0%
AATGGCGTGATTATCATAAT+TGG - Chr3:16759379-16759398 MsG0380012456.01.T01:intron 30.0%
AATGTGAAGTTCTGTTAAGT+GGG - Chr3:16759217-16759236 MsG0380012456.01.T01:CDS 30.0%
AATTCTGATAATCTGTTGGT+TGG + Chr3:16758769-16758788 None:intergenic 30.0%
ACTTACAAGATCATATCTGA+TGG + Chr3:16758813-16758832 None:intergenic 30.0%
ATAATTCAGGGATAACAGAA+GGG - Chr3:16761742-16761761 MsG0380012456.01.T01:intron 30.0%
ATAGGACAATATGGATATCA+TGG - Chr3:16760044-16760063 MsG0380012456.01.T01:intron 30.0%
ATCCAATTCTGATAATCTGT+TGG + Chr3:16758773-16758792 None:intergenic 30.0%
ATGAAGACAAAGGCTATAAA+TGG - Chr3:16761430-16761449 MsG0380012456.01.T01:intron 30.0%
ATGGCGTGATTATCATAATT+GGG - Chr3:16759380-16759399 MsG0380012456.01.T01:intron 30.0%
ATTAGGGTTTGCAAAAGAAA+GGG - Chr3:16759447-16759466 MsG0380012456.01.T01:intron 30.0%
CAAGATTAATTGTAACAGCA+GGG - Chr3:16762683-16762702 MsG0380012456.01.T01:intron 30.0%
CATATATCAAACATCTTGCT+GGG - Chr3:16760801-16760820 MsG0380012456.01.T01:intron 30.0%
CTTACAAGATCATATCTGAT+GGG + Chr3:16758812-16758831 None:intergenic 30.0%
GAAAATAAGAGAATCATGGT+GGG + Chr3:16761325-16761344 None:intergenic 30.0%
GATATCCATATTGTCCTATT+CGG + Chr3:16760043-16760062 None:intergenic 30.0%
GATGTCTAGTTATGAAATAG+TGG - Chr3:16759157-16759176 MsG0380012456.01.T01:CDS 30.0%
GTGAGAATAATAAAATAGGG+AGG - Chr3:16760276-16760295 MsG0380012456.01.T01:intron 30.0%
GTTGGAATTCGTCTTAATTA+GGG - Chr3:16759241-16759260 MsG0380012456.01.T01:intron 30.0%
TAAAATGCATGTAAGATAGC+TGG - Chr3:16761211-16761230 MsG0380012456.01.T01:CDS 30.0%
TAAGAAACACTTGAAGAACT+TGG - Chr3:16762731-16762750 MsG0380012456.01.T01:intron 30.0%
TAATGTGAAGTTCTGTTAAG+TGG - Chr3:16759216-16759235 MsG0380012456.01.T01:CDS 30.0%
TCAAATCCAAAAATCGATGT+CGG - Chr3:16762762-16762781 MsG0380012456.01.T01:intron 30.0%
TCTTAGAAATTCCATACTTC+CGG - Chr3:16762084-16762103 MsG0380012456.01.T01:intron 30.0%
TGAAAATAAGAGAATCATGG+TGG + Chr3:16761326-16761345 None:intergenic 30.0%
TGACGTGATTGTCATAATTA+GGG - Chr3:16759477-16759496 MsG0380012456.01.T01:intron 30.0%
TGATTTGATCCCTTATGTTA+TGG - Chr3:16760310-16760329 MsG0380012456.01.T01:intron 30.0%
TTCAATGCTTCTAATATTGC+AGG - Chr3:16760385-16760404 MsG0380012456.01.T01:intron 30.0%
TTGATGTCTAATAATGGCAT+TGG - Chr3:16762564-16762583 MsG0380012456.01.T01:intron 30.0%
TTTAGTAGGAGTAGATTACA+TGG - Chr3:16761672-16761691 MsG0380012456.01.T01:intron 30.0%
TTTCTTCTTCTTTGTTAACG+TGG - Chr3:16759904-16759923 MsG0380012456.01.T01:intron 30.0%
! ATTCTGATAATCTGTTGGTT+GGG + Chr3:16758768-16758787 None:intergenic 30.0%
! GTTTTCAATTTTCACCTTGT+TGG - Chr3:16762975-16762994 MsG0380012456.01.T01:CDS 30.0%
!! AGTATTTTAAGTCGTGATTG+CGG + Chr3:16759628-16759647 None:intergenic 30.0%
!! CAACTTTTAAAAACCATTGC+CGG - Chr3:16761806-16761825 MsG0380012456.01.T01:intron 30.0%
!! GGAAATAAAAAGTGTTCTTC+TGG - Chr3:16761405-16761424 MsG0380012456.01.T01:intron 30.0%
!! TATAGCCTTTTACTTGTTAC+AGG - Chr3:16763150-16763169 MsG0380012456.01.T01:CDS 30.0%
!! TATTCGGTGTTTGCAATAAT+GGG + Chr3:16760027-16760046 None:intergenic 30.0%
!! TGCAAAATCTAGAGTGATTT+TGG - Chr3:16761296-16761315 MsG0380012456.01.T01:CDS 30.0%
!! TTCTTAGCAGCTTTTTGAAA+TGG + Chr3:16762627-16762646 None:intergenic 30.0%
!! TTGTTTGTTATCAGTTATCC+CGG - Chr3:16762380-16762399 MsG0380012456.01.T01:intron 30.0%
AAACACCGAATAGGACAATA+TGG - Chr3:16760035-16760054 MsG0380012456.01.T01:intron 35.0%
AAGAAACGTAAAGTTGTGGA+AGG - Chr3:16762888-16762907 MsG0380012456.01.T01:intron 35.0%
AAGACAAAGGCTATAAATGG+AGG - Chr3:16761433-16761452 MsG0380012456.01.T01:intron 35.0%
AATCAGGTCTCCATAATTCA+GGG - Chr3:16761730-16761749 MsG0380012456.01.T01:intron 35.0%
AATGTGCACTTTATGCAATG+TGG - Chr3:16762935-16762954 MsG0380012456.01.T01:intron 35.0%
AATTTACGGCAATGAGACTA+CGG - Chr3:16760484-16760503 MsG0380012456.01.T01:intron 35.0%
ACTCAGAAACATTCCACTAA+TGG + Chr3:16762515-16762534 None:intergenic 35.0%
ACTGACACAAGTAGTATACA+AGG - Chr3:16760674-16760693 MsG0380012456.01.T01:intron 35.0%
AGAACCATGAACAAGAGAAT+AGG + Chr3:16761080-16761099 None:intergenic 35.0%
AGACAAAGGCTATAAATGGA+GGG - Chr3:16761434-16761453 MsG0380012456.01.T01:intron 35.0%
ATACAAGGACAAGCGTTAAT+TGG - Chr3:16760689-16760708 MsG0380012456.01.T01:intron 35.0%
ATCTACATTACACACTTAGC+TGG - Chr3:16762708-16762727 MsG0380012456.01.T01:intron 35.0%
ATGAGTTTAGTGTTGTGTTG+CGG - Chr3:16761474-16761493 MsG0380012456.01.T01:intron 35.0%
ATGCAGTTTCTCATTGCTAA+TGG - Chr3:16763096-16763115 MsG0380012456.01.T01:CDS 35.0%
ATTAGCAATGAGAAACTGCA+TGG + Chr3:16763097-16763116 None:intergenic 35.0%
CATAATTCAGGGATAACAGA+AGG - Chr3:16761741-16761760 MsG0380012456.01.T01:intron 35.0%
CATTATTGCAAACACCGAAT+AGG - Chr3:16760026-16760045 MsG0380012456.01.T01:intron 35.0%
CGTTGGAATTCGTCTTAATT+AGG - Chr3:16759240-16759259 MsG0380012456.01.T01:intron 35.0%
CTTAGAAATTCCATACTTCC+GGG - Chr3:16762085-16762104 MsG0380012456.01.T01:intron 35.0%
CTTCTGTTATCCCTGAATTA+TGG + Chr3:16761743-16761762 None:intergenic 35.0%
GAAGATGAATGATGATAGTC+AGG - Chr3:16760171-16760190 MsG0380012456.01.T01:intron 35.0%
GATTAGGGTTTGCAAAAGAA+AGG - Chr3:16759446-16759465 MsG0380012456.01.T01:intron 35.0%
GCAAGATTAATTGTAACAGC+AGG - Chr3:16762682-16762701 MsG0380012456.01.T01:intron 35.0%
GCATATATCAAACATCTTGC+TGG - Chr3:16760800-16760819 MsG0380012456.01.T01:intron 35.0%
GCTATCCATATTGTCCTATT+CGG + Chr3:16759790-16759809 None:intergenic 35.0%
GGGTTTAGCTAATTAACTCT+AGG - Chr3:16761155-16761174 MsG0380012456.01.T01:CDS 35.0%
GGTGAAAATTGAAAACTGTC+TGG + Chr3:16762971-16762990 None:intergenic 35.0%
GTCAAAGAAACGTAAAGTTG+TGG - Chr3:16762884-16762903 MsG0380012456.01.T01:intron 35.0%
GTGACGTGATTGTCATAATT+AGG - Chr3:16759476-16759495 MsG0380012456.01.T01:intron 35.0%
GTTGCCTTGATGTCTAATAA+TGG - Chr3:16762558-16762577 MsG0380012456.01.T01:intron 35.0%
TAATCAGGTCTCCATAATTC+AGG - Chr3:16761729-16761748 MsG0380012456.01.T01:intron 35.0%
TAGCTAGACACTACTGAAAT+CGG + Chr3:16761579-16761598 None:intergenic 35.0%
TCTTATGAAAGTCACATAGC+TGG - Chr3:16760584-16760603 MsG0380012456.01.T01:intron 35.0%
TGGCGTGATTATCATAATTG+GGG - Chr3:16759381-16759400 MsG0380012456.01.T01:intron 35.0%
TGTACCTATTCTCTTGTTCA+TGG - Chr3:16761073-16761092 MsG0380012456.01.T01:CDS 35.0%
TTAGGGTTTGCAAAAGAAAG+GGG - Chr3:16759448-16759467 MsG0380012456.01.T01:intron 35.0%
TTATCTTAATTGGACCCACA+AGG - Chr3:16761115-16761134 MsG0380012456.01.T01:CDS 35.0%
! GAGCTTGATATTGTTGTTGA+GGG + Chr3:16758613-16758632 None:intergenic 35.0%
! TGAGCTTGATATTGTTGTTG+AGG + Chr3:16758614-16758633 None:intergenic 35.0%
!! AGAGTATCGTGAAACAATAG+TGG + Chr3:16759682-16759701 None:intergenic 35.0%
!! CTATTCGGTGTTGTCAATAA+CGG + Chr3:16759775-16759794 None:intergenic 35.0%
!! CTATTCGGTGTTTGCAATAA+TGG + Chr3:16760028-16760047 None:intergenic 35.0%
!! GTTATCTAGACTTTGAGACA+GGG - Chr3:16763065-16763084 MsG0380012456.01.T01:CDS 35.0%
!! TAATTTTGACGGCAACAATG+AGG - Chr3:16762234-16762253 MsG0380012456.01.T01:intron 35.0%
!! TGTTATCTAGACTTTGAGAC+AGG - Chr3:16763064-16763083 MsG0380012456.01.T01:CDS 35.0%
!! TTGTTGTTGAGGGTACATTT+TGG + Chr3:16758603-16758622 None:intergenic 35.0%
!!! CTATAAATGGAGGGCATTTT+GGG - Chr3:16761443-16761462 MsG0380012456.01.T01:intron 35.0%
!!! CTTCTTTGGTTTTGGTTGAT+CGG + Chr3:16762844-16762863 None:intergenic 35.0%
!!! TTGAGGGTACATTTTGGTTT+TGG + Chr3:16758597-16758616 None:intergenic 35.0%
AAACGTAAAGTTGTGGAAGG+AGG - Chr3:16762891-16762910 MsG0380012456.01.T01:intron 40.0%
AACACCGTTACGCTTGAATT+CGG + Chr3:16762601-16762620 None:intergenic 40.0%
ACATGGCCACCACAAATTTA+CGG - Chr3:16760470-16760489 MsG0380012456.01.T01:intron 40.0%
AGCTAGACACTACTGAAATC+GGG + Chr3:16761578-16761597 None:intergenic 40.0%
ATAACTAGAAGCCAAACTCG+TGG - Chr3:16759831-16759850 MsG0380012456.01.T01:intron 40.0%
ATCCACTGCGAAAAAGTTAC+TGG - Chr3:16761384-16761403 MsG0380012456.01.T01:intron 40.0%
ATCGGGGAATGATGAATAGT+AGG + Chr3:16758669-16758688 None:intergenic 40.0%
ATGGAACGATACTGCAATTC+TGG - Chr3:16759411-16759430 MsG0380012456.01.T01:intron 40.0%
ATTACTGTGAGTGTTTCACG+TGG - Chr3:16760077-16760096 MsG0380012456.01.T01:intron 40.0%
ATTGCCGAATTCAAGCGTAA+CGG - Chr3:16762594-16762613 MsG0380012456.01.T01:intron 40.0%
ATTGTCTGCGATATAGAGCA+AGG + Chr3:16760920-16760939 None:intergenic 40.0%
CAACACCGAATAGGACAATA+TGG - Chr3:16759782-16759801 MsG0380012456.01.T01:intron 40.0%
CACTTCACATCTCAAAGCTT+TGG + Chr3:16760537-16760556 None:intergenic 40.0%
CCAGCAATTTGACTATGACA+TGG - Chr3:16761506-16761525 MsG0380012456.01.T01:intron 40.0%
CCATGTCATAGTCAAATTGC+TGG + Chr3:16761509-16761528 None:intergenic 40.0%
CGATCAACCAAAACCAAAGA+AGG - Chr3:16762842-16762861 MsG0380012456.01.T01:intron 40.0%
CGATCTTTCTTGAAAGCTGT+AGG - Chr3:16761898-16761917 MsG0380012456.01.T01:intron 40.0%
CGTGAAACACTCACAGTAAT+AGG + Chr3:16760077-16760096 None:intergenic 40.0%
CGTTATTGACAACACCGAAT+AGG - Chr3:16759773-16759792 MsG0380012456.01.T01:intron 40.0%
CTTCTAATATTGCAGGCTGT+TGG - Chr3:16760392-16760411 MsG0380012456.01.T01:intron 40.0%
GACAGCTATCATTTCCTGTA+TGG + Chr3:16762273-16762292 None:intergenic 40.0%
GAGCAACTTGGGAAAAATGT+AGG + Chr3:16762449-16762468 None:intergenic 40.0%
GCAAATGAAAGGTGAGACAA+TGG - Chr3:16759361-16759380 MsG0380012456.01.T01:intron 40.0%
GCATAATGCACACACTTGTA+TGG - Chr3:16760963-16760982 MsG0380012456.01.T01:intron 40.0%
GTCTCATTGCCGTAAATTTG+TGG + Chr3:16760482-16760501 None:intergenic 40.0%
GTGTTGTCAATAACGGTTTG+CGG + Chr3:16759768-16759787 None:intergenic 40.0%
GTTAATGATTGCCACGAGTT+TGG + Chr3:16759845-16759864 None:intergenic 40.0%
GTTGCACGAAACCTTACAAA+AGG + Chr3:16760872-16760891 None:intergenic 40.0%
TAGCTGGTTATGTGCATGTT+TGG - Chr3:16761227-16761246 MsG0380012456.01.T01:CDS 40.0%
TATACAAATGGAGTTTGGCC+CGG + Chr3:16762106-16762125 None:intergenic 40.0%
TATACCTCTGTAGTTAGCAG+AGG + Chr3:16761638-16761657 None:intergenic 40.0%
TCATTGCCGTAAATTTGTGG+TGG + Chr3:16760479-16760498 None:intergenic 40.0%
TCGGGGAATGATGAATAGTA+GGG + Chr3:16758668-16758687 None:intergenic 40.0%
TGGCGTGATTGTCATGATTA+GGG - Chr3:16759431-16759450 MsG0380012456.01.T01:intron 40.0%
TGGCGTGATTGTCATGTTTA+GGG - Chr3:16759335-16759354 MsG0380012456.01.T01:intron 40.0%
TGTAGCCACAATCACAGTAT+CGG + Chr3:16759515-16759534 None:intergenic 40.0%
TGTTGCTGCTGGAAATTGTA+GGG + Chr3:16758638-16758657 None:intergenic 40.0%
TTAGACATCAAGGCAACCTA+CGG + Chr3:16762555-16762574 None:intergenic 40.0%
TTCCTGTATGGCCGTATATA+AGG + Chr3:16762261-16762280 None:intergenic 40.0%
TTCGCATGAGATGCAATAGT+AGG + Chr3:16760647-16760666 None:intergenic 40.0%
TTGTGGCCCGATTAAAGTAT+TGG + Chr3:16762808-16762827 None:intergenic 40.0%
TTGTTGCTGCTGGAAATTGT+AGG + Chr3:16758639-16758658 None:intergenic 40.0%
! AAGCTTTGGTGACTTTGGTT+TGG + Chr3:16760523-16760542 None:intergenic 40.0%
! ATCAACCTGTTTCTTAGGCT+CGG + Chr3:16760732-16760751 None:intergenic 40.0%
! CAAATGGTGGCTTTTGTTAG+TGG - Chr3:16759720-16759739 MsG0380012456.01.T01:intron 40.0%
! GCAGAATCAACCTGTTTCTT+AGG + Chr3:16760737-16760756 None:intergenic 40.0%
! GTTTAGGGTTCGCAAATGAA+AGG - Chr3:16759350-16759369 MsG0380012456.01.T01:intron 40.0%
! TCAAGTTCTGATGCCTTCTT+TGG + Chr3:16762858-16762877 None:intergenic 40.0%
! TCTCAAAGCTTTGGTGACTT+TGG + Chr3:16760528-16760547 None:intergenic 40.0%
! TCTTCTGGAGATGAAGACAA+AGG - Chr3:16761420-16761439 MsG0380012456.01.T01:intron 40.0%
! TTTTTCGCAGTGGATGAGTA+AGG + Chr3:16761379-16761398 None:intergenic 40.0%
!! GAAACAGGTTGATTCTGCAA+CGG - Chr3:16760739-16760758 MsG0380012456.01.T01:intron 40.0%
!! TATCTGATGGGTTCAGATTG+AGG + Chr3:16758800-16758819 None:intergenic 40.0%
!! TCTGATGCCTTCTTTGGTTT+TGG + Chr3:16762852-16762871 None:intergenic 40.0%
!! TTGGTGACTTTGGTTTGGTT+AGG + Chr3:16760518-16760537 None:intergenic 40.0%
!!! GCTATAAATGGAGGGCATTT+TGG - Chr3:16761442-16761461 MsG0380012456.01.T01:intron 40.0%
!!! TTCCAGTAACTTTTTCGCAG+TGG + Chr3:16761389-16761408 None:intergenic 40.0%
AACCTACGGGTCACAAAAAG+TGG + Chr3:16762541-16762560 None:intergenic 45.0%
AAGGCAAGATAGGATCACTG+TGG - Chr3:16761134-16761153 MsG0380012456.01.T01:CDS 45.0%
AAGTTCTGTTAAGTGGGCGT+TGG - Chr3:16759223-16759242 MsG0380012456.01.T01:CDS 45.0%
ACATGCTGCTATGGTGAAGA+AGG - Chr3:16763004-16763023 MsG0380012456.01.T01:CDS 45.0%
AGAAGATGCTGCTCCAAAAG+GGG + Chr3:16761832-16761851 None:intergenic 45.0%
AGGAGGATGAAGTGAAGGAT+CGG + Chr3:16758687-16758706 None:intergenic 45.0%
AGGCAAGATAGGATCACTGT+GGG - Chr3:16761135-16761154 MsG0380012456.01.T01:CDS 45.0%
AGTGATCCTATCTTGCCTTG+TGG + Chr3:16761133-16761152 None:intergenic 45.0%
AGTTTACCTTCTGCGTGGAA+TGG - Chr3:16760446-16760465 MsG0380012456.01.T01:intron 45.0%
ATAGGCCGATACTGTGATTG+TGG - Chr3:16759507-16759526 MsG0380012456.01.T01:intron 45.0%
ATGGAACGATACCGCAATTG+TGG - Chr3:16759315-16759334 MsG0380012456.01.T01:intron 45.0%
CAGAAGATGCTGCTCCAAAA+GGG + Chr3:16761833-16761852 None:intergenic 45.0%
CCACCGCCAATACTTTAATC+GGG - Chr3:16762799-16762818 MsG0380012456.01.T01:intron 45.0%
CGAGTGTGAATGTCTTCATG+TGG - Chr3:16759867-16759886 MsG0380012456.01.T01:intron 45.0%
CTGGCGTGATTGTCATGATT+AGG - Chr3:16759430-16759449 MsG0380012456.01.T01:intron 45.0%
GAAACCAGTGTTGTCAATCG+TGG + Chr3:16762338-16762357 None:intergenic 45.0%
GAATTCAAGCGTAACGGTGT+TGG - Chr3:16762600-16762619 MsG0380012456.01.T01:intron 45.0%
GACCTTATATACGGCCATAC+AGG - Chr3:16762256-16762275 MsG0380012456.01.T01:intron 45.0%
GAGGTGTAAAGAGAAACAGG+AGG + Chr3:16758746-16758765 None:intergenic 45.0%
GCCACCGCCAATACTTTAAT+CGG - Chr3:16762798-16762817 MsG0380012456.01.T01:intron 45.0%
GCTAGACACTACTGAAATCG+GGG + Chr3:16761577-16761596 None:intergenic 45.0%
GTGATCCTATCTTGCCTTGT+GGG + Chr3:16761132-16761151 None:intergenic 45.0%
GTGGCGTGATTGTCATGTTT+AGG - Chr3:16759334-16759353 MsG0380012456.01.T01:intron 45.0%
TAGACATCAAGGCAACCTAC+GGG + Chr3:16762554-16762573 None:intergenic 45.0%
TCAAGGTTGCTCAATCTGCA+TGG - Chr3:16762649-16762668 MsG0380012456.01.T01:intron 45.0%
TCACCATAGCAGCATGTTTC+TGG + Chr3:16763001-16763020 None:intergenic 45.0%
TCAGAAGATGCTGCTCCAAA+AGG + Chr3:16761834-16761853 None:intergenic 45.0%
TGACAATCACGCCACAATTG+CGG + Chr3:16759329-16759348 None:intergenic 45.0%
! CTGAGTTCTGACTTTCACTC+TGG - Chr3:16760355-16760374 MsG0380012456.01.T01:intron 45.0%
! CTGATAATCTGTTGGTTGGG+AGG + Chr3:16758765-16758784 None:intergenic 45.0%
! TGGGAGGTGTAAAGAGAAAC+AGG + Chr3:16758749-16758768 None:intergenic 45.0%
! TTTTACCCTATTGGGCTGCA+AGG - Chr3:16762482-16762501 MsG0380012456.01.T01:intron 45.0%
!! ATGTGCATGTTTGGTGTCAC+TGG - Chr3:16761236-16761255 MsG0380012456.01.T01:CDS 45.0%
!! CTGTAGCGGATATAATGTCG+TGG + Chr3:16761615-16761634 None:intergenic 45.0%
!! GATTAAAGTATTGGCGGTGG+CGG + Chr3:16762799-16762818 None:intergenic 45.0%
!! TGGCCCGATTAAAGTATTGG+CGG + Chr3:16762805-16762824 None:intergenic 45.0%
!! TGTGCATGTTTGGTGTCACT+GGG - Chr3:16761237-16761256 MsG0380012456.01.T01:CDS 45.0%
!!! CTAGTGCCGACATCGATTTT+TGG + Chr3:16762771-16762790 None:intergenic 45.0%
ACAGCCTCTGCTAACTACAG+AGG - Chr3:16761631-16761650 MsG0380012456.01.T01:intron 50.0%
AGATCGTACAAGTCTGTCGC+AGG + Chr3:16761884-16761903 None:intergenic 50.0%
CACGCAGAAGGTAAACTTGC+AGG + Chr3:16760443-16760462 None:intergenic 50.0%
CATGTACCATTCCACGCAGA+AGG + Chr3:16760455-16760474 None:intergenic 50.0%
CGATCCACGATTGACAACAC+TGG - Chr3:16762331-16762350 MsG0380012456.01.T01:intron 50.0%
CTGCAAGTTTACCTTCTGCG+TGG - Chr3:16760441-16760460 MsG0380012456.01.T01:intron 50.0%
CTGCTATGGTGAAGAAGGCA+GGG - Chr3:16763009-16763028 MsG0380012456.01.T01:CDS 50.0%
CTTCTGCGTGGAATGGTACA+TGG - Chr3:16760453-16760472 MsG0380012456.01.T01:intron 50.0%
GAGGATGAAGTGAAGGATCG+GGG + Chr3:16758685-16758704 None:intergenic 50.0%
GATCCTTCACTTCATCCTCC+TGG - Chr3:16758686-16758705 MsG0380012456.01.T01:three_prime_UTR 50.0%
GCAAGGCGTAAAGCCATTAG+TGG - Chr3:16762499-16762518 MsG0380012456.01.T01:intron 50.0%
GCAATCCGAGCCTAAGAAAC+AGG - Chr3:16760724-16760743 MsG0380012456.01.T01:intron 50.0%
GGAGGATGAAGTGAAGGATC+GGG + Chr3:16758686-16758705 None:intergenic 50.0%
GGGTTTGCAAAAGAAAGGGG+AGG - Chr3:16759451-16759470 MsG0380012456.01.T01:intron 50.0%
GTAGTTAGCAGAGGCTGTAG+CGG + Chr3:16761629-16761648 None:intergenic 50.0%
TGGCCAGAAACATGCTGCTA+TGG - Chr3:16762995-16763014 MsG0380012456.01.T01:CDS 50.0%
TGGCGCGACTGTCATAGTTA+GGG - Chr3:16759285-16759304 MsG0380012456.01.T01:intron 50.0%
TTACGCCTTGCAGCCCAATA+GGG + Chr3:16762490-16762509 None:intergenic 50.0%
TTCGATCTCTGCTGCAAACG+AGG - Chr3:16759546-16759565 MsG0380012456.01.T01:intron 50.0%
TTGGACCCACAAGGCAAGAT+AGG - Chr3:16761124-16761143 MsG0380012456.01.T01:CDS 50.0%
TTTACGCCTTGCAGCCCAAT+AGG + Chr3:16762491-16762510 None:intergenic 50.0%
! AGGGTTGTTGTTGTTGCTGC+TGG + Chr3:16758649-16758668 None:intergenic 50.0%
!! CAGCATGTTTCTGGCCAACA+AGG + Chr3:16762992-16763011 None:intergenic 50.0%
!! CCCGATTAAAGTATTGGCGG+TGG + Chr3:16762802-16762821 None:intergenic 50.0%
!!! GACCACTTTTTGTGACCCGT+AGG - Chr3:16762536-16762555 MsG0380012456.01.T01:intron 50.0%
AAGAAGGCAGGGTCAGTCAC+TGG - Chr3:16763020-16763039 MsG0380012456.01.T01:CDS 55.0%
AAGTCTGTCGCAGGTGTGCA+CGG + Chr3:16761875-16761894 None:intergenic 55.0%
ATCGGGCCACAAGAAAAGCC+AGG - Chr3:16762816-16762835 MsG0380012456.01.T01:intron 55.0%
GAAGGAGGAGCTGCAGTTGA+TGG - Chr3:16762906-16762925 MsG0380012456.01.T01:intron 55.0%
GCTGCTATGGTGAAGAAGGC+AGG - Chr3:16763008-16763027 MsG0380012456.01.T01:CDS 55.0%
GGCTCGGATTGCTTGACTAC+AGG + Chr3:16760716-16760735 None:intergenic 55.0%
GTGCCAGGAGGATGAAGTGA+AGG + Chr3:16758692-16758711 None:intergenic 55.0%
GTGGCGCGACTGTCATAGTT+AGG - Chr3:16759284-16759303 MsG0380012456.01.T01:intron 55.0%
GTTGCACCGTTGACCACCAT+GGG - Chr3:16761528-16761547 MsG0380012456.01.T01:intron 55.0%
TGGAGTTTGGCCCGGAAGTA+TGG + Chr3:16762098-16762117 None:intergenic 55.0%
TTTGCAAGTGGGTCAGTGCC+AGG + Chr3:16758707-16758726 None:intergenic 55.0%
! AAACCATTGCCGGCCCCTTT+TGG - Chr3:16761816-16761835 MsG0380012456.01.T01:intron 55.0%
!! GCATTTTGACGGAGCACCCA+TGG + Chr3:16761547-16761566 None:intergenic 55.0%
!! TAAAGTATTGGCGGTGGCGG+TGG + Chr3:16762796-16762815 None:intergenic 55.0%
!! TCGGTGCCTGGCTTTTCTTG+TGG + Chr3:16762825-16762844 None:intergenic 55.0%
!! TTTTGACGGAGCACCCATGG+TGG + Chr3:16761544-16761563 None:intergenic 55.0%
!!! GGTTTTGGTTGATCGGTGCC+TGG + Chr3:16762837-16762856 None:intergenic 55.0%
GATGCTGCTCCAAAAGGGGC+CGG + Chr3:16761828-16761847 None:intergenic 60.0%
GGTTGCACCGTTGACCACCA+TGG - Chr3:16761527-16761546 MsG0380012456.01.T01:intron 60.0%
! GGAGCACCCATGGTGGTCAA+CGG + Chr3:16761537-16761556 None:intergenic 60.0%
! GGGGCAGCGCAGCATTTTGA+CGG + Chr3:16761558-16761577 None:intergenic 60.0%
! TGGGAGAAAGCACGCTGCTC+AGG - Chr3:16760820-16760839 MsG0380012456.01.T01:intron 60.0%
GCAAGTGGGTCAGTGCCAGG+AGG + Chr3:16758704-16758723 None:intergenic 65.0%
GCTCCAAAAGGGGCCGGCAA+TGG + Chr3:16761822-16761841 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
Chr3 gene 16758591 16763209 16758591 ID=MsG0380012456.01;Name=MsG0380012456.01
Chr3 mRNA 16758591 16763209 16758591 ID=MsG0380012456.01.T01;Parent=MsG0380012456.01;Name=MsG0380012456.01.T01;_AED=0.49;_eAED=0.49;_QI=14|0.5|0.66|1|1|1|3|163|354
Chr3 exon 16758591 16759242 16758591 ID=MsG0380012456.01.T01:exon:21949;Parent=MsG0380012456.01.T01
Chr3 exon 16761040 16761393 16761040 ID=MsG0380012456.01.T01:exon:21948;Parent=MsG0380012456.01.T01
Chr3 exon 16762974 16763209 16762974 ID=MsG0380012456.01.T01:exon:21947;Parent=MsG0380012456.01.T01
Chr3 five_prime_UTR 16763196 16763209 16763196 ID=MsG0380012456.01.T01:five_prime_utr;Parent=MsG0380012456.01.T01
Chr3 CDS 16762974 16763195 16762974 ID=MsG0380012456.01.T01:cds;Parent=MsG0380012456.01.T01
Chr3 CDS 16761040 16761393 16761040 ID=MsG0380012456.01.T01:cds;Parent=MsG0380012456.01.T01
Chr3 CDS 16758754 16759242 16758754 ID=MsG0380012456.01.T01:cds;Parent=MsG0380012456.01.T01
Chr3 three_prime_UTR 16758591 16758753 16758591 ID=MsG0380012456.01.T01:three_prime_utr;Parent=MsG0380012456.01.T01
Gene Sequence

>MsG0380012456.01.T01

ATGTACCCTCAACAACAATATCAAGCTCAACCCTACAATTTCCAGCAGCAACAACAACAACCCTACTATTCATCATTCCCCGATCCTTCACTTCATCCTCCTGGCACTGACCCACTTGCAAATTCAACATCTTTTGTACCTCCTGTTTCTCTTTACACCTCCCAACCAACAGATTATCAGAATTGGATCGTTCCTCAATCTGAACCCATCAGATATGATCTTGCTGTTGGTTCATCACACGAGACTTCAGCAGCACCTGCAAGTTTACCTTCTGCGTGGAATGGTACATGGCCACCACAAATTTACGGCAATGAGACTACGGCAATGTTGCCTAACCAAACCAAAGTCACCAAAGCTTTGAGATGTGAAGTGTGTAAACTTGATGTCAATAGCAAAGACTCTTATGAAAGTCACATAGCTGGAAAGAAACACAAGAAGAATTTGCAGATACAGACTAATCCTACTATTGCATCTCATGCGAATGTACAAACTGACACAAGTAGTATACAAGGACAAGCGTTAATTGGTCCTGTAGTCAAGCAATCCGAGCCTAAGAAACAGGTTGATTCTGCAACGGTTGCCTTGATGTCTAATAATGGCATTGGTCCATCTATTGCCGAATTCAAGCGTAACGGTGTTGGTCCATTTCAAAAAGCTGCTAAGAAAATCAAGGTTGCTCAATCTGCATGGTGTGAAGTTTGCAAGATTAATTGTAACAGCAGGGATATCTACATTACACACTTAGCTGGTAAGAAACACTTGAAGAACTTGGAGAAACTGTCAAATCCAAAAATCGATGTCGGCACTAGTGCCACCGCCACCGCCAATACTTTAATCGGGCCACAAGAAAAGCCAGGCACCGATCAACCAAAACCAAAGAAGGCATCAGAACTTGATATTGAGTCAAAGAAACGTAAAGTTGTGGAAGGAGGAGCTGCAGTTGATGGTATTAAAATGTGCACTTTATGCAATGTGGTTTGTAATAGCCAGACAGTTTTCAATTTTCACCTTGTTGGCCAGAAACATGCTGCTATGGTGAAGAAGGCAGGGTCAGTCACTGGTTGA
Protein sequence

>MsG0380012456.01.T01

MYPQQQYQAQPYNFQQQQQQPYYSSFPDPSLHPPGTDPLANSTSFVPPVSLYTSQPTDYQNWIVPQSEPIRYDLAVGSSHETSAAPASLPSAWNGTWPPQIYGNETTAMLPNQTKVTKALRCEVCKLDVNSKDSYESHIAGKKHKKNLQIQTNPTIASHANVQTDTSSIQGQALIGPVVKQSEPKKQVDSATVALMSNNGIGPSIAEFKRNGVGPFQKAAKKIKVAQSAWCEVCKINCNSRDIYITHLAGKKHLKNLEKLSNPKIDVGTSATATANTLIGPQEKPGTDQPKPKKASELDIESKKRKVVEGGAAVDGIKMCTLCNVVCNSQTVFNFHLVGQKHAAMVKKAGSVTG*