AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0380012657.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380012657.01.T01 MTR_3g028740 97.024 336 6 3 1 332 1 336 0.0 660
MsG0380012657.01.T01 MTR_4g065017 44.110 365 135 12 3 335 1 328 4.44e-81 251
MsG0380012657.01.T01 MTR_2g097910 46.512 344 146 10 3 334 1 318 8.52e-77 239
MsG0380012657.01.T01 MTR_1g085040 78.899 109 23 0 19 127 9 117 1.16e-58 194
MsG0380012657.01.T01 MTR_1g085640 76.147 109 26 0 19 127 9 117 1.52e-57 192
MsG0380012657.01.T01 MTR_8g017440 71.429 112 32 0 18 129 8 119 3.27e-57 189
MsG0380012657.01.T01 MTR_1g112760 59.036 166 60 4 19 180 10 171 3.97e-57 186
MsG0380012657.01.T01 MTR_2g099740 73.394 109 29 0 18 126 8 116 6.18e-57 191
MsG0380012657.01.T01 MTR_3g077110 59.064 171 59 4 19 182 9 175 8.52e-57 189
MsG0380012657.01.T01 MTR_7g110830 76.147 109 26 0 19 127 9 117 1.25e-56 189
MsG0380012657.01.T01 MTR_4g105130 76.852 108 25 0 19 126 9 116 2.82e-56 187
MsG0380012657.01.T01 MTR_8g017540 69.492 118 35 1 9 126 46 162 3.07e-56 189
MsG0380012657.01.T01 MTR_8g017500 57.237 152 61 2 18 169 8 155 4.20e-56 187
MsG0380012657.01.T01 MTR_8g098860 67.273 110 36 0 18 127 8 117 2.20e-54 181
MsG0380012657.01.T01 MTR_8g017390 66.942 121 39 1 18 137 8 128 1.66e-53 183
MsG0380012657.01.T01 MTR_5g010020 69.903 103 31 0 18 120 8 110 2.66e-53 179
MsG0380012657.01.T01 MTR_7g111290 60.403 149 44 2 19 152 9 157 4.62e-53 180
MsG0380012657.01.T01 MTR_2g064160 42.986 221 111 5 18 229 7 221 4.96e-52 175
MsG0380012657.01.T01 MTR_8g017340 71.560 109 30 1 19 126 9 117 5.47e-52 180
MsG0380012657.01.T01 MTR_8g017350 70.642 109 31 1 19 126 9 117 7.44e-51 179
MsG0380012657.01.T01 MTR_1g100667 70.370 108 32 0 19 126 10 117 7.92e-50 168
MsG0380012657.01.T01 MTR_4g073420 34.375 320 151 9 19 325 9 282 2.71e-49 167
MsG0380012657.01.T01 MTR_6g055910 66.055 109 37 0 17 125 9 117 7.25e-48 163
MsG0380012657.01.T01 MTR_2g089620 66.972 109 36 0 18 126 8 116 9.40e-48 164
MsG0380012657.01.T01 MTR_3g074520 65.138 109 38 0 18 126 8 116 1.12e-47 165
MsG0380012657.01.T01 MTR_3g097450 64.815 108 38 0 19 126 9 116 1.23e-47 163
MsG0380012657.01.T01 MTR_5g079670 58.871 124 42 2 3 126 1 115 1.24e-47 160
MsG0380012657.01.T01 MTR_2g011660 67.619 105 34 0 22 126 13 117 1.39e-47 164
MsG0380012657.01.T01 MTR_2g089450 55.303 132 56 1 18 146 8 139 5.40e-47 160
MsG0380012657.01.T01 MTR_4g091490 66.667 105 35 0 22 126 13 117 7.89e-47 163
MsG0380012657.01.T01 MTR_8g095390 59.483 116 47 0 19 134 9 124 9.63e-47 161
MsG0380012657.01.T01 MTR_1g100653 54.615 130 57 1 19 146 9 138 1.56e-46 160
MsG0380012657.01.T01 MTR_7g076740 62.500 112 41 1 18 128 8 119 1.14e-45 158
MsG0380012657.01.T01 MTR_4g082230 64.815 108 38 0 19 126 9 116 1.17e-45 161
MsG0380012657.01.T01 MTR_7g011170 64.815 108 38 0 19 126 9 116 1.23e-45 158
MsG0380012657.01.T01 MTR_6g012690 64.220 109 39 0 18 126 8 116 1.47e-45 159
MsG0380012657.01.T01 MTR_4g082290 65.741 108 37 0 19 126 9 116 2.85e-45 160
MsG0380012657.01.T01 MTR_0251s0050 56.061 132 55 1 19 147 10 141 3.99e-45 156
MsG0380012657.01.T01 MTR_7g115650 62.264 106 40 0 22 127 12 117 4.56e-45 154
MsG0380012657.01.T01 MTR_5g029840 61.905 105 40 0 22 126 12 116 5.40e-45 157
MsG0380012657.01.T01 MTR_8g031360 61.017 118 45 1 10 126 1 118 5.41e-45 156
MsG0380012657.01.T01 MTR_4g102380 61.468 109 42 0 18 126 8 116 5.84e-45 155
MsG0380012657.01.T01 MTR_3g065440 61.818 110 42 0 18 127 8 117 1.31e-44 155
MsG0380012657.01.T01 MTR_4g485530 58.065 124 44 1 3 126 1 116 1.41e-44 152
MsG0380012657.01.T01 MTR_5g078140 57.037 135 52 3 18 146 8 142 1.52e-44 156
MsG0380012657.01.T01 MTR_5g007370 63.303 109 40 0 18 126 8 116 1.66e-44 155
MsG0380012657.01.T01 MTR_4g125520 58.678 121 46 1 19 135 9 129 2.35e-44 155
MsG0380012657.01.T01 MTR_4g478180 61.468 109 42 0 18 126 9 117 3.79e-44 155
MsG0380012657.01.T01 MTR_1g043050 57.364 129 55 0 19 147 9 137 5.10e-44 152
MsG0380012657.01.T01 MTR_6g009430 57.798 109 46 0 18 126 8 116 6.38e-44 155
MsG0380012657.01.T01 MTR_4g121460 61.111 108 42 0 19 126 9 116 1.60e-43 154
MsG0380012657.01.T01 MTR_0008s0390 62.617 107 40 0 19 125 10 116 2.01e-43 151
MsG0380012657.01.T01 MTR_1g076150 55.556 135 54 1 19 147 9 143 3.10e-43 150
MsG0380012657.01.T01 MTR_7g117730 59.091 110 45 0 18 127 8 117 3.99e-43 150
MsG0380012657.01.T01 MTR_8g020490 61.538 104 40 0 24 127 10 113 5.42e-43 150
MsG0380012657.01.T01 MTR_2g089420 63.889 108 39 0 22 129 11 118 8.94e-43 154
MsG0380012657.01.T01 MTR_8g027345 53.125 128 59 1 19 146 9 135 9.09e-43 150
MsG0380012657.01.T01 MTR_3g461490 62.037 108 41 0 19 126 9 116 9.15e-43 151
MsG0380012657.01.T01 MTR_2g034790 52.273 132 61 1 19 148 9 140 9.61e-43 151
MsG0380012657.01.T01 MTR_7g096930 59.664 119 45 1 19 134 9 127 1.19e-42 150
MsG0380012657.01.T01 MTR_3g083540 59.259 108 44 0 19 126 38 145 2.35e-42 150
MsG0380012657.01.T01 MTR_1g043080 62.963 108 40 0 19 126 9 116 2.76e-42 148
MsG0380012657.01.T01 MTR_0008s0470 48.993 149 72 2 20 166 11 157 5.98e-42 148
MsG0380012657.01.T01 MTR_7g087130 51.773 141 63 2 19 156 9 147 2.22e-41 148
MsG0380012657.01.T01 MTR_7g035075 53.982 113 52 0 22 134 14 126 2.73e-41 144
MsG0380012657.01.T01 MTR_4g100720 59.813 107 43 0 19 125 10 116 2.99e-41 143
MsG0380012657.01.T01 MTR_1g017000 49.612 129 55 2 18 136 8 136 4.86e-41 145
MsG0380012657.01.T01 MTR_6g006030 53.448 116 54 0 12 127 4 119 1.74e-40 142
MsG0380012657.01.T01 MTR_1g110460 53.982 113 52 0 15 127 19 131 2.43e-40 144
MsG0380012657.01.T01 MTR_2g067420 61.165 103 40 0 18 120 10 112 2.45e-40 145
MsG0380012657.01.T01 MTR_1g045610 60.000 105 42 0 23 127 22 126 2.66e-40 143
MsG0380012657.01.T01 MTR_7g010210 56.410 117 48 1 18 131 8 124 7.37e-40 144
MsG0380012657.01.T01 MTR_7g010210 56.410 117 48 1 18 131 8 124 9.11e-40 142
MsG0380012657.01.T01 MTR_1g073170 51.639 122 59 0 17 138 15 136 1.21e-39 141
MsG0380012657.01.T01 MTR_3g052430 54.630 108 49 0 20 127 39 146 6.22e-39 145
MsG0380012657.01.T01 MTR_4g063100 53.982 113 52 0 23 135 8 120 7.11e-39 139
MsG0380012657.01.T01 MTR_0140s0030 38.889 180 100 1 19 198 10 179 8.69e-39 141
MsG0380012657.01.T01 MTR_0489s0020 38.889 180 100 1 19 198 10 179 8.69e-39 141
MsG0380012657.01.T01 MTR_3g052450 52.727 110 52 0 18 127 36 145 9.46e-39 145
MsG0380012657.01.T01 MTR_5g042030 59.048 105 43 0 22 126 7 111 1.36e-38 139
MsG0380012657.01.T01 MTR_3g039990 55.357 112 50 0 19 130 10 121 1.62e-38 140
MsG0380012657.01.T01 MTR_1g086510 53.175 126 58 1 3 127 1 126 1.78e-38 138
MsG0380012657.01.T01 MTR_0008s0280 48.092 131 68 0 17 147 7 137 2.15e-38 137
MsG0380012657.01.T01 MTR_1g062940 56.075 107 47 0 22 128 6 112 3.03e-38 136
MsG0380012657.01.T01 MTR_3g011610 55.140 107 48 0 22 128 37 143 3.54e-38 143
MsG0380012657.01.T01 MTR_1g021230 56.481 108 47 0 22 129 57 164 3.60e-38 142
MsG0380012657.01.T01 MTR_6g012180 58.252 103 43 0 18 120 8 110 3.86e-38 139
MsG0380012657.01.T01 MTR_0063s0090 46.154 143 73 1 18 160 8 146 5.44e-38 136
MsG0380012657.01.T01 MTR_5g014990 55.455 110 48 1 18 126 8 117 6.34e-38 138
MsG0380012657.01.T01 MTR_1g017140 56.364 110 47 1 18 126 8 117 7.70e-38 139
MsG0380012657.01.T01 MTR_8g042410 54.206 107 49 0 22 128 37 143 9.93e-38 142
MsG0380012657.01.T01 MTR_4g057635 55.455 110 48 1 18 126 8 117 1.14e-37 138
MsG0380012657.01.T01 MTR_6g090405 44.375 160 85 3 18 173 8 167 3.27e-37 135
MsG0380012657.01.T01 MTR_3g103570 53.636 110 50 1 18 126 8 117 5.04e-37 137
MsG0380012657.01.T01 MTR_7g109320 57.851 121 51 0 19 139 9 129 5.69e-37 137
MsG0380012657.01.T01 MTR_1g086530 53.774 106 49 0 22 127 33 138 1.63e-36 134
MsG0380012657.01.T01 MTR_7g102110 48.760 121 61 1 18 137 8 128 2.05e-36 133
MsG0380012657.01.T01 MTR_2g095520 55.769 104 45 1 18 120 8 111 3.82e-36 134
MsG0380012657.01.T01 MTR_2g096380 45.985 137 70 1 19 151 3 139 6.34e-36 130
MsG0380012657.01.T01 MTR_2g088170 53.636 110 51 0 19 128 26 135 3.24e-35 134
MsG0380012657.01.T01 MTR_5g078910 55.660 106 45 2 22 126 7 111 5.51e-35 130
MsG0380012657.01.T01 MTR_4g097570 55.340 103 45 1 18 119 8 110 1.82e-34 129
MsG0380012657.01.T01 MTR_0197s0010 49.138 116 59 0 27 142 6 121 1.87e-34 127
MsG0380012657.01.T01 MTR_5g079120 48.000 125 62 1 5 126 41 165 2.01e-34 129
MsG0380012657.01.T01 MTR_5g079220 47.581 124 62 1 6 126 2 125 3.18e-34 127
MsG0380012657.01.T01 MTR_4g128670 53.846 104 47 1 18 120 8 111 3.24e-34 129
MsG0380012657.01.T01 MTR_7g111290 84.848 66 10 0 54 119 2 67 3.71e-34 129
MsG0380012657.01.T01 MTR_2g033170 55.660 106 47 0 22 127 24 129 4.98e-34 128
MsG0380012657.01.T01 MTR_0247s0040 53.774 106 49 0 18 123 3 108 5.18e-34 124
MsG0380012657.01.T01 MTR_5g062790 46.774 124 62 2 23 145 10 130 9.02e-34 127
MsG0380012657.01.T01 MTR_0193s0090 39.891 183 98 4 18 197 3 176 9.78e-34 124
MsG0380012657.01.T01 MTR_8g060940 53.333 105 49 0 18 122 3 107 1.02e-33 125
MsG0380012657.01.T01 MTR_5g079290 50.427 117 55 3 11 126 7 121 1.56e-33 125
MsG0380012657.01.T01 MTR_4g097570 54.808 104 45 2 18 119 8 111 6.79e-33 124
MsG0380012657.01.T01 MTR_5g078800 52.381 105 50 0 22 126 7 111 9.36e-33 123
MsG0380012657.01.T01 MTR_7g017260 45.455 132 70 1 18 147 21 152 1.02e-32 123
MsG0380012657.01.T01 MTR_1g083630 52.336 107 51 0 21 127 11 117 1.48e-32 128
MsG0380012657.01.T01 MTR_5g088640 48.305 118 57 2 23 139 13 127 2.31e-32 122
MsG0380012657.01.T01 MTR_5g088080 48.305 118 57 2 23 139 13 127 2.44e-32 122
MsG0380012657.01.T01 MTR_5g088150 48.305 118 57 2 23 139 13 127 2.44e-32 122
MsG0380012657.01.T01 MTR_5g488210 48.305 118 57 2 23 139 13 127 2.44e-32 122
MsG0380012657.01.T01 MTR_5g488170 47.458 118 58 2 23 139 13 127 5.95e-32 120
MsG0380012657.01.T01 MTR_5g078950 51.402 107 50 2 18 123 3 108 7.08e-32 121
MsG0380012657.01.T01 MTR_4g123040 49.580 119 57 1 9 127 14 129 8.39e-32 122
MsG0380012657.01.T01 MTR_5g078930 53.465 101 47 0 23 123 10 110 2.17e-31 118
MsG0380012657.01.T01 MTR_5g078860 49.524 105 53 0 22 126 7 111 2.45e-31 120
MsG0380012657.01.T01 MTR_4g063100 59.756 82 33 0 54 135 10 91 2.51e-31 118
MsG0380012657.01.T01 MTR_0001s0360 51.887 106 49 2 22 126 7 111 3.65e-31 119
MsG0380012657.01.T01 MTR_6g055910 71.831 71 20 0 55 125 18 88 8.12e-31 118
MsG0380012657.01.T01 MTR_5g007300 58.947 95 37 1 4 98 48 140 1.18e-30 114
MsG0380012657.01.T01 MTR_8g006470 49.074 108 54 1 18 124 6 113 1.64e-29 115
MsG0380012657.01.T01 MTR_4g029540 49.573 117 56 3 22 137 10 124 3.12e-29 114
MsG0380012657.01.T01 MTR_4g094982 41.566 166 76 4 24 169 5 169 4.30e-29 114
MsG0380012657.01.T01 MTR_5g088610 44.355 124 65 2 23 145 10 130 5.58e-29 115
MsG0380012657.01.T01 MTR_4g019370 56.311 103 42 2 24 125 38 138 7.33e-29 115
MsG0380012657.01.T01 MTR_3g463400 43.307 127 70 2 9 135 118 242 1.35e-28 115
MsG0380012657.01.T01 MTR_4g128190 50.962 104 37 2 22 124 11 101 1.55e-28 111
MsG0380012657.01.T01 MTR_5g070020 41.880 117 67 1 9 125 107 222 3.33e-28 113
MsG0380012657.01.T01 MTR_5g016510 38.503 187 83 5 24 180 5 189 3.97e-28 112
MsG0380012657.01.T01 MTR_2g096380 49.020 102 48 1 54 151 19 120 6.26e-28 109
MsG0380012657.01.T01 MTR_3g101290 53.636 110 50 1 16 125 29 137 3.57e-27 107
MsG0380012657.01.T01 MTR_5g049190 46.018 113 60 1 18 130 13 124 4.07e-27 107
MsG0380012657.01.T01 MTR_3g077650 30.147 272 168 8 4 272 168 420 2.85e-26 109
MsG0380012657.01.T01 MTR_6g015455 50.980 102 49 1 24 125 5 105 4.01e-26 110
MsG0380012657.01.T01 MTR_1g085880 51.887 106 49 2 21 124 10 115 4.25e-26 103
MsG0380012657.01.T01 MTR_7g061330 50.000 106 52 1 21 126 110 214 1.03e-25 108
MsG0380012657.01.T01 MTR_7g461410 50.000 106 52 1 21 126 110 214 1.03e-25 108
MsG0380012657.01.T01 MTR_1g057980 46.729 107 55 2 22 128 78 182 1.34e-25 105
MsG0380012657.01.T01 MTR_7g061330 50.000 106 52 1 21 126 74 178 1.38e-25 108
MsG0380012657.01.T01 MTR_3g045430 42.991 107 61 0 20 126 11 117 1.54e-25 104
MsG0380012657.01.T01 MTR_1g085770 51.887 106 49 2 21 124 10 115 2.45e-25 104
MsG0380012657.01.T01 MTR_5g041570 42.149 121 69 1 11 131 121 240 2.63e-25 106
MsG0380012657.01.T01 MTR_5g082910 51.515 99 47 1 24 122 19 116 4.11e-25 103
MsG0380012657.01.T01 MTR_3g110028 49.057 106 53 1 21 126 82 186 4.41e-25 107
MsG0380012657.01.T01 MTR_7g035350 46.087 115 55 3 24 138 225 332 1.01e-24 104
MsG0380012657.01.T01 MTR_7g451170 43.590 117 59 2 9 125 182 291 5.02e-24 102
MsG0380012657.01.T01 MTR_4g105660 43.925 107 59 1 19 125 175 280 5.22e-24 102
MsG0380012657.01.T01 MTR_6g074860 47.525 101 52 1 24 124 4 103 5.40e-24 99.4
MsG0380012657.01.T01 MTR_7g037260 44.037 109 59 2 24 132 145 251 7.95e-24 101
MsG0380012657.01.T01 MTR_4g088015 44.144 111 60 2 24 134 221 329 2.86e-23 100
MsG0380012657.01.T01 MTR_6g027360 42.991 107 58 2 20 125 74 178 5.64e-23 97.8
MsG0380012657.01.T01 MTR_6g027340 39.823 113 65 2 16 127 8 118 9.77e-23 94.7
MsG0380012657.01.T01 MTR_1g026870 45.283 106 57 1 21 126 82 186 9.98e-23 100
MsG0380012657.01.T01 MTR_4g082040 40.336 119 70 1 9 127 90 207 1.01e-22 99.0
MsG0380012657.01.T01 MTR_6g027370 41.026 117 67 2 12 127 86 201 4.53e-22 96.3
MsG0380012657.01.T01 MTR_7g450950 39.062 128 68 3 5 129 144 264 7.19e-22 95.5
MsG0380012657.01.T01 MTR_5g010650 46.939 98 51 1 22 119 108 204 1.49e-21 95.9
MsG0380012657.01.T01 MTR_7g037130 40.708 113 64 2 24 134 145 256 9.02e-21 92.4
MsG0380012657.01.T01 MTR_3g089045 44.762 105 55 2 24 127 16 118 3.70e-19 87.0
MsG0380012657.01.T01 MTR_7g086960 42.727 110 61 2 17 125 81 189 6.04e-18 84.3
MsG0380012657.01.T01 MTR_5g038910 36.296 135 78 3 27 154 29 162 9.15e-18 84.3
MsG0380012657.01.T01 MTR_8g017480 66.667 45 15 0 18 62 8 52 1.46e-17 76.3
MsG0380012657.01.T01 MTR_5g038910 36.296 135 78 3 27 154 29 162 1.87e-17 83.6
MsG0380012657.01.T01 MTR_0023s0210 45.679 81 44 0 18 98 3 83 3.23e-17 76.3
MsG0380012657.01.T01 MTR_7g061550 37.895 95 57 1 27 119 10 104 6.91e-16 78.6
MsG0380012657.01.T01 MTR_8g468380 37.624 101 62 1 27 127 25 124 3.03e-15 77.0
MsG0380012657.01.T01 MTR_4g063100 51.786 56 27 0 80 135 1 56 5.92e-15 72.8
MsG0380012657.01.T01 MTR_6g055910 63.043 46 17 0 80 125 2 47 1.03e-13 70.1
MsG0380012657.01.T01 MTR_2g096380 47.368 57 30 0 80 136 1 57 1.37e-12 65.9
MsG0380012657.01.T01 MTR_1g008970 37.079 89 56 0 44 132 110 198 3.53e-12 66.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380012657.01.T01 AT3G08500 44.290 359 155 9 1 335 1 338 1.65e-76 239
MsG0380012657.01.T01 AT5G12870 78.400 125 25 1 3 127 1 123 2.34e-69 219
MsG0380012657.01.T01 AT4G01680 77.982 109 24 0 19 127 9 117 5.47e-59 191
MsG0380012657.01.T01 AT5G26660 53.226 186 71 2 19 204 9 178 2.57e-58 193
MsG0380012657.01.T01 AT4G01680 77.982 109 24 0 19 127 9 117 2.89e-58 192
MsG0380012657.01.T01 AT3G13890 74.312 109 28 0 18 126 8 116 5.65e-58 192
MsG0380012657.01.T01 AT1G09540 76.147 109 26 0 19 127 9 117 6.06e-58 192
MsG0380012657.01.T01 AT1G57560 75.000 108 27 0 19 126 9 116 9.19e-57 187
MsG0380012657.01.T01 AT1G57560 75.000 108 27 0 19 126 9 116 1.08e-56 186
MsG0380012657.01.T01 AT1G63910 68.182 110 35 0 18 127 8 117 2.60e-55 186
MsG0380012657.01.T01 AT3G13890 68.644 118 28 1 18 126 8 125 5.71e-55 184
MsG0380012657.01.T01 AT4G01680 70.248 121 24 1 19 127 9 129 9.24e-55 183
MsG0380012657.01.T01 AT3G12720 68.519 108 34 0 19 126 19 126 4.97e-52 175
MsG0380012657.01.T01 AT4G05100 64.103 117 42 0 10 126 1 117 8.02e-50 170
MsG0380012657.01.T01 AT4G21440 67.593 108 35 0 19 126 9 116 2.31e-48 167
MsG0380012657.01.T01 AT2G16720 66.667 108 36 0 19 126 9 116 3.50e-48 164
MsG0380012657.01.T01 AT5G54230 67.619 105 34 0 22 126 12 116 8.42e-48 164
MsG0380012657.01.T01 AT3G48920 45.263 190 92 2 18 195 14 203 9.96e-48 162
MsG0380012657.01.T01 AT4G38620 45.213 188 85 5 19 203 9 181 1.23e-47 163
MsG0380012657.01.T01 AT4G34990 59.350 123 49 1 24 145 14 136 2.23e-47 162
MsG0380012657.01.T01 AT1G22640 64.815 108 38 0 19 126 9 116 2.53e-47 161
MsG0380012657.01.T01 AT5G10280 65.421 107 37 0 20 126 10 116 6.94e-47 162
MsG0380012657.01.T01 AT3G01140 64.220 109 39 0 18 126 8 116 1.05e-46 162
MsG0380012657.01.T01 AT4G28110 63.303 109 40 0 18 126 8 116 1.12e-46 160
MsG0380012657.01.T01 AT5G15310 53.472 144 62 2 22 164 12 151 3.06e-46 158
MsG0380012657.01.T01 AT3G01140 64.220 109 39 0 18 126 51 159 3.51e-46 162
MsG0380012657.01.T01 AT5G65230 62.385 109 41 0 18 126 8 116 4.08e-46 160
MsG0380012657.01.T01 AT5G52600 55.385 130 57 1 19 147 9 138 4.54e-46 156
MsG0380012657.01.T01 AT4G09460 62.037 108 41 0 19 126 9 116 4.56e-46 157
MsG0380012657.01.T01 AT5G14750 47.126 174 75 4 3 165 1 168 4.81e-46 156
MsG0380012657.01.T01 AT5G60890 61.321 106 41 0 22 127 12 117 4.86e-46 159
MsG0380012657.01.T01 AT3G61250 64.220 109 39 0 18 126 8 116 6.46e-46 159
MsG0380012657.01.T01 AT4G12350 57.812 128 53 1 18 144 8 135 7.03e-46 158
MsG0380012657.01.T01 AT5G15310 52.703 148 65 2 18 164 8 151 7.45e-46 159
MsG0380012657.01.T01 AT5G15310 52.703 148 65 2 18 164 8 151 7.84e-46 159
MsG0380012657.01.T01 AT2G31180 62.281 114 43 0 19 132 9 122 7.96e-46 157
MsG0380012657.01.T01 AT1G74430 65.714 105 36 0 22 126 12 116 3.09e-45 156
MsG0380012657.01.T01 AT5G56110 63.889 108 39 0 19 126 9 116 3.12e-45 158
MsG0380012657.01.T01 AT3G02940 59.633 109 44 0 18 126 8 116 3.14e-45 157
MsG0380012657.01.T01 AT1G34670 64.762 105 37 0 22 126 12 116 5.99e-45 158
MsG0380012657.01.T01 AT3G02940 59.633 109 44 0 18 126 8 116 6.63e-45 157
MsG0380012657.01.T01 AT3G02940 59.633 109 44 0 18 126 8 116 6.63e-45 157
MsG0380012657.01.T01 AT5G40330 40.191 209 114 4 23 222 13 219 7.29e-45 154
MsG0380012657.01.T01 AT4G25560 67.961 103 33 0 23 125 11 113 7.76e-45 155
MsG0380012657.01.T01 AT3G23250 45.402 174 92 2 19 192 9 179 1.35e-44 155
MsG0380012657.01.T01 AT5G35550 43.204 206 106 4 10 214 1 196 2.80e-44 153
MsG0380012657.01.T01 AT5G52260 59.375 128 45 1 19 139 9 136 3.52e-44 153
MsG0380012657.01.T01 AT1G56160 46.512 172 84 1 18 189 10 173 4.16e-44 154
MsG0380012657.01.T01 AT1G66230 60.909 110 43 0 18 127 8 117 8.10e-44 153
MsG0380012657.01.T01 AT5G16770 60.952 105 41 0 22 126 12 116 1.29e-43 154
MsG0380012657.01.T01 AT5G16770 60.952 105 41 0 22 126 12 116 1.29e-43 154
MsG0380012657.01.T01 AT4G22680 53.571 140 62 2 18 156 8 145 1.42e-43 152
MsG0380012657.01.T01 AT5G61420 61.905 105 40 0 22 126 12 116 2.93e-43 154
MsG0380012657.01.T01 AT5G16770 60.952 105 41 0 22 126 12 116 3.17e-43 153
MsG0380012657.01.T01 AT5G16770 60.952 105 41 0 22 126 12 116 3.17e-43 153
MsG0380012657.01.T01 AT1G35515 57.407 108 46 0 19 126 9 116 3.22e-43 149
MsG0380012657.01.T01 AT5G07700 61.905 105 40 0 22 126 12 116 3.76e-43 153
MsG0380012657.01.T01 AT5G07700 61.905 105 40 0 22 126 12 116 3.76e-43 153
MsG0380012657.01.T01 AT1G06180 63.889 108 39 0 19 126 9 116 3.94e-43 150
MsG0380012657.01.T01 AT2G47460 61.111 108 42 0 19 126 9 116 4.92e-43 153
MsG0380012657.01.T01 AT1G79180 47.531 162 82 2 18 176 10 171 6.16e-43 151
MsG0380012657.01.T01 AT1G18570 61.905 105 40 0 22 126 13 117 6.80e-43 152
MsG0380012657.01.T01 AT5G16600 60.000 110 44 0 18 127 8 117 1.20e-42 151
MsG0380012657.01.T01 AT5G07690 61.905 105 40 0 22 126 12 116 1.47e-42 151
MsG0380012657.01.T01 AT1G16490 57.018 114 49 0 18 131 10 123 2.93e-42 149
MsG0380012657.01.T01 AT3G62610 59.259 108 44 0 19 126 9 116 3.59e-42 150
MsG0380012657.01.T01 AT5G49330 61.111 108 42 0 19 126 9 116 4.37e-42 150
MsG0380012657.01.T01 AT3G27920 51.220 123 60 0 21 143 13 135 5.83e-42 146
MsG0380012657.01.T01 AT3G13540 42.169 166 95 1 18 182 19 184 8.21e-42 147
MsG0380012657.01.T01 AT3G27810 49.206 126 64 0 19 144 17 142 8.25e-42 146
MsG0380012657.01.T01 AT5G14340 51.007 149 70 2 18 165 20 166 2.03e-41 146
MsG0380012657.01.T01 AT4G17785 59.048 105 43 0 22 126 13 117 2.17e-41 148
MsG0380012657.01.T01 AT5G62320 41.848 184 95 3 10 185 1 180 2.22e-41 145
MsG0380012657.01.T01 AT4G17785 59.048 105 43 0 22 126 13 117 2.67e-41 148
MsG0380012657.01.T01 AT3G28470 62.136 103 39 0 18 120 8 110 4.67e-41 147
MsG0380012657.01.T01 AT3G01530 54.054 111 51 0 22 132 25 135 7.72e-41 143
MsG0380012657.01.T01 AT3G24310 56.034 116 51 0 23 138 19 134 8.38e-41 145
MsG0380012657.01.T01 AT4G13480 56.757 111 48 0 23 133 7 117 9.75e-41 144
MsG0380012657.01.T01 AT5G40350 49.180 122 62 0 20 141 15 136 9.99e-41 143
MsG0380012657.01.T01 AT3G30210 58.333 108 45 0 23 130 28 135 1.65e-40 144
MsG0380012657.01.T01 AT1G68320 41.143 175 88 2 21 195 18 177 1.68e-40 144
MsG0380012657.01.T01 AT3G12820 58.716 109 45 0 18 126 10 118 1.74e-40 143
MsG0380012657.01.T01 AT3G47600 51.128 133 64 1 18 149 8 140 4.22e-40 144
MsG0380012657.01.T01 AT1G74080 60.000 105 42 0 22 126 12 116 4.40e-40 144
MsG0380012657.01.T01 AT2G26960 54.386 114 52 0 11 124 9 122 4.86e-40 147
MsG0380012657.01.T01 AT1G18710 58.095 105 44 0 22 126 12 116 7.36e-40 142
MsG0380012657.01.T01 AT1G08810 56.881 109 47 0 18 126 8 116 7.78e-40 142
MsG0380012657.01.T01 AT5G26660 50.000 156 62 2 49 204 8 147 9.25e-40 143
MsG0380012657.01.T01 AT5G55020 57.547 106 45 0 22 127 26 131 1.49e-39 147
MsG0380012657.01.T01 AT4G26930 57.282 103 44 0 22 124 19 121 2.24e-39 144
MsG0380012657.01.T01 AT2G32460 54.206 107 49 0 22 128 18 124 2.80e-39 145
MsG0380012657.01.T01 AT2G32460 54.206 107 49 0 22 128 6 112 3.01e-39 145
MsG0380012657.01.T01 AT1G74650 57.407 108 46 0 19 126 9 116 4.14e-39 142
MsG0380012657.01.T01 AT3G28910 54.310 116 53 0 18 133 8 123 4.46e-39 142
MsG0380012657.01.T01 AT3G11440 49.593 123 62 0 6 128 25 147 6.42e-39 144
MsG0380012657.01.T01 AT5G62470 54.386 114 52 0 19 132 9 122 6.88e-39 142
MsG0380012657.01.T01 AT2G47190 36.179 246 130 6 20 254 18 247 1.05e-38 139
MsG0380012657.01.T01 AT5G06100 55.140 107 48 0 22 128 32 138 1.63e-38 143
MsG0380012657.01.T01 AT1G48000 57.009 107 46 0 21 127 31 137 1.65e-38 138
MsG0380012657.01.T01 AT3G49690 56.364 110 47 1 18 126 8 117 2.00e-38 139
MsG0380012657.01.T01 AT3G11440 49.593 123 62 0 6 128 25 147 2.73e-38 144
MsG0380012657.01.T01 AT3G11440 49.593 123 62 0 6 128 25 147 2.73e-38 144
MsG0380012657.01.T01 AT3G11440 49.593 123 62 0 6 128 25 147 2.73e-38 144
MsG0380012657.01.T01 AT5G06100 55.140 107 48 0 22 128 32 138 5.28e-38 142
MsG0380012657.01.T01 AT5G06100 55.140 107 48 0 22 128 32 138 5.28e-38 142
MsG0380012657.01.T01 AT5G06100 55.140 107 48 0 22 128 32 138 5.28e-38 142
MsG0380012657.01.T01 AT5G06100 55.140 107 48 0 22 128 32 138 5.28e-38 142
MsG0380012657.01.T01 AT5G23000 55.455 110 48 1 18 126 8 117 1.35e-37 138
MsG0380012657.01.T01 AT5G65790 55.455 110 48 1 18 126 8 117 1.38e-37 139
MsG0380012657.01.T01 AT1G25340 50.820 122 60 0 12 133 8 129 1.61e-37 136
MsG0380012657.01.T01 AT5G57620 55.455 110 48 1 18 126 8 117 2.11e-37 137
MsG0380012657.01.T01 AT1G79180 40.000 195 81 3 18 176 10 204 2.70e-37 137
MsG0380012657.01.T01 AT5G62470 54.386 114 51 1 19 132 9 121 4.57e-37 137
MsG0380012657.01.T01 AT3G06490 55.172 116 52 0 12 127 9 124 3.47e-36 134
MsG0380012657.01.T01 AT4G37780 37.264 212 118 4 18 218 8 215 7.49e-36 132
MsG0380012657.01.T01 AT2G36890 52.727 110 51 1 18 126 8 117 1.41e-35 132
MsG0380012657.01.T01 AT5G59780 48.305 118 61 0 19 136 5 122 1.72e-35 130
MsG0380012657.01.T01 AT3G53200 53.211 109 51 0 22 130 9 117 2.13e-35 129
MsG0380012657.01.T01 AT3G46130 50.877 114 56 0 23 136 10 123 2.47e-35 130
MsG0380012657.01.T01 AT2G36890 48.819 127 63 2 1 126 33 158 2.49e-35 132
MsG0380012657.01.T01 AT5G35550 42.458 179 92 2 9 187 12 179 1.30e-33 125
MsG0380012657.01.T01 AT1G66370 47.015 134 61 2 22 148 8 138 4.70e-33 124
MsG0380012657.01.T01 AT5G49620 53.774 106 49 0 22 127 26 131 7.33e-33 124
MsG0380012657.01.T01 AT1G25340 48.361 122 58 1 12 133 8 124 1.14e-32 123
MsG0380012657.01.T01 AT1G25340 48.361 122 58 1 12 133 8 124 2.19e-32 123
MsG0380012657.01.T01 AT5G14750 50.420 119 46 3 58 165 18 134 5.72e-32 118
MsG0380012657.01.T01 AT2G26950 47.706 109 56 1 19 127 13 120 2.62e-31 122
MsG0380012657.01.T01 AT3G47600 49.573 117 54 2 34 149 22 134 7.41e-31 120
MsG0380012657.01.T01 AT1G66380 54.808 104 47 0 22 125 8 111 9.55e-31 114
MsG0380012657.01.T01 AT3G27810 53.333 90 42 0 55 144 4 93 2.72e-30 114
MsG0380012657.01.T01 AT3G12820 72.464 69 19 0 58 126 2 70 2.75e-30 114
MsG0380012657.01.T01 AT1G56650 49.180 122 56 1 22 137 8 129 5.39e-30 115
MsG0380012657.01.T01 AT3G60460 50.926 108 52 1 18 124 7 114 6.87e-30 116
MsG0380012657.01.T01 AT1G66390 56.190 105 44 2 22 125 8 111 2.42e-29 114
MsG0380012657.01.T01 AT5G49620 47.500 120 49 1 22 127 26 145 3.14e-29 115
MsG0380012657.01.T01 AT5G40350 52.809 89 42 0 53 141 3 91 3.46e-29 111
MsG0380012657.01.T01 AT3G46130 55.422 83 37 0 54 136 9 91 5.67e-29 112
MsG0380012657.01.T01 AT5G59780 56.098 82 36 0 55 136 20 101 1.04e-28 111
MsG0380012657.01.T01 AT3G46130 56.098 82 36 0 55 136 20 101 1.32e-28 111
MsG0380012657.01.T01 AT5G40360 45.833 120 62 3 7 126 142 258 1.66e-28 114
MsG0380012657.01.T01 AT3G53200 59.211 76 31 0 55 130 9 84 3.44e-27 107
MsG0380012657.01.T01 AT4G18770 44.628 121 65 2 19 138 212 331 4.06e-27 111
MsG0380012657.01.T01 AT2G39880 52.212 113 52 2 13 125 40 150 6.04e-27 110
MsG0380012657.01.T01 AT3G27785 47.222 108 54 2 19 125 184 289 1.72e-26 109
MsG0380012657.01.T01 AT5G67300 50.000 102 50 1 24 125 6 106 2.56e-26 107
MsG0380012657.01.T01 AT3G55730 44.595 148 77 3 19 166 52 194 1.77e-25 106
MsG0380012657.01.T01 AT5G58850 39.200 125 75 1 22 146 103 226 2.63e-25 106
MsG0380012657.01.T01 AT4G37260 51.961 102 48 1 24 125 13 113 3.28e-25 104
MsG0380012657.01.T01 AT3G50060 44.715 123 66 2 24 146 6 126 3.45e-25 103
MsG0380012657.01.T01 AT5G11050 40.164 122 71 2 24 144 105 225 4.73e-25 105
MsG0380012657.01.T01 AT3G09230 52.427 103 48 1 24 126 55 156 7.04e-25 104
MsG0380012657.01.T01 AT5G02320 46.729 107 56 1 21 127 64 169 1.52e-24 104
MsG0380012657.01.T01 AT5G02320 46.729 107 56 1 21 127 124 229 1.69e-24 105
MsG0380012657.01.T01 AT5G02320 46.729 107 56 1 21 127 124 229 1.69e-24 105
MsG0380012657.01.T01 AT1G69560 39.516 124 72 2 5 127 88 209 3.68e-24 101
MsG0380012657.01.T01 AT1G69560 39.516 124 72 2 5 127 104 225 4.24e-24 101
MsG0380012657.01.T01 AT3G09370 49.038 104 52 1 22 125 133 235 4.44e-24 103
MsG0380012657.01.T01 AT3G09370 49.038 104 52 1 22 125 128 230 4.72e-24 103
MsG0380012657.01.T01 AT3G09370 49.038 104 52 1 22 125 141 243 6.37e-24 103
MsG0380012657.01.T01 AT2G25230 40.496 121 69 2 17 137 19 136 9.92e-24 98.6
MsG0380012657.01.T01 AT5G11510 47.170 106 55 1 21 126 78 182 1.23e-23 103
MsG0380012657.01.T01 AT5G11510 47.170 106 55 1 21 126 78 182 1.23e-23 103
MsG0380012657.01.T01 AT5G11510 47.170 106 55 1 21 126 78 182 1.23e-23 103
MsG0380012657.01.T01 AT5G11510 47.170 106 55 1 21 126 78 182 1.39e-23 102
MsG0380012657.01.T01 AT5G11510 47.170 106 55 1 21 126 78 182 1.45e-23 102
MsG0380012657.01.T01 AT3G23250 43.200 125 68 2 68 192 1 122 2.38e-23 97.4
MsG0380012657.01.T01 AT1G22640 69.492 59 18 0 68 126 1 59 2.75e-23 96.3
MsG0380012657.01.T01 AT2G23290 49.020 102 51 1 24 125 13 113 4.78e-23 98.2
MsG0380012657.01.T01 AT1G66380 61.111 72 28 0 54 125 7 78 7.48e-23 92.4
MsG0380012657.01.T01 AT1G17950 47.059 102 53 1 24 125 5 105 9.51e-23 96.3
MsG0380012657.01.T01 AT5G14750 45.872 109 46 3 68 165 1 107 1.11e-22 92.8
MsG0380012657.01.T01 AT5G14750 45.872 109 46 3 68 165 1 107 1.11e-22 92.8
MsG0380012657.01.T01 AT1G26780 42.342 111 61 2 22 131 96 204 4.20e-22 95.1
MsG0380012657.01.T01 AT1G26780 42.342 111 61 2 22 131 96 204 5.01e-22 96.3
MsG0380012657.01.T01 AT4G33450 36.090 133 84 1 7 139 2 133 2.29e-21 92.4
MsG0380012657.01.T01 AT4G32730 43.396 106 59 1 21 126 84 188 2.74e-21 95.9
MsG0380012657.01.T01 AT4G32730 43.396 106 59 1 21 126 84 188 2.75e-21 95.9
MsG0380012657.01.T01 AT4G32730 43.396 106 59 1 21 126 84 188 2.75e-21 95.9
MsG0380012657.01.T01 AT4G32730 43.396 106 59 1 21 126 84 188 2.75e-21 95.9
MsG0380012657.01.T01 AT4G32730 43.396 106 59 1 21 126 84 188 2.75e-21 95.9
MsG0380012657.01.T01 AT5G17800 36.508 126 79 1 12 137 81 205 3.40e-20 90.5
MsG0380012657.01.T01 AT1G73410 46.154 104 55 1 24 127 6 108 3.53e-20 89.0
MsG0380012657.01.T01 AT1G71030 56.061 66 29 0 61 126 5 70 6.14e-20 86.7
MsG0380012657.01.T01 AT2G02820 41.584 101 58 1 27 127 33 132 6.26e-20 89.7
MsG0380012657.01.T01 AT2G02820 41.584 101 58 1 27 127 33 132 6.97e-20 90.9
MsG0380012657.01.T01 AT3G29020 33.846 130 85 1 24 153 65 193 7.82e-20 87.8
MsG0380012657.01.T01 AT1G73410 46.154 104 55 1 24 127 6 108 7.89e-20 87.0
MsG0380012657.01.T01 AT1G71030 56.061 66 29 0 61 126 19 84 8.69e-20 86.7
MsG0380012657.01.T01 AT2G02820 41.584 101 58 1 27 127 33 132 9.88e-20 90.5
MsG0380012657.01.T01 AT1G18960 42.857 105 53 4 24 126 10 109 1.96e-19 88.2
MsG0380012657.01.T01 AT3G29020 33.846 130 85 1 24 153 67 195 2.30e-19 87.8
MsG0380012657.01.T01 AT5G40430 36.937 111 67 3 17 127 47 154 2.90e-19 86.7
MsG0380012657.01.T01 AT4G00540 41.284 109 60 2 22 127 101 208 1.43e-18 86.7
MsG0380012657.01.T01 AT4G00540 41.284 109 60 2 22 127 99 206 2.17e-18 86.3
MsG0380012657.01.T01 AT1G66380 50.633 79 39 0 22 100 8 86 5.15e-18 79.3
MsG0380012657.01.T01 AT1G14350 40.594 101 59 1 27 127 28 127 1.55e-17 84.0
MsG0380012657.01.T01 AT1G14350 40.594 101 59 1 27 127 28 127 1.55e-17 84.0
MsG0380012657.01.T01 AT5G39700 33.884 121 79 1 19 139 51 170 9.08e-15 72.4
MsG0380012657.01.T01 AT2G37630 31.783 129 85 2 27 152 7 135 1.13e-14 74.7
MsG0380012657.01.T01 AT4G25560 71.111 45 13 0 81 125 3 47 2.25e-14 72.0
MsG0380012657.01.T01 AT5G59780 47.368 57 30 0 80 136 1 57 4.06e-14 70.1
MsG0380012657.01.T01 AT3G46130 48.214 56 29 0 81 136 2 57 7.25e-14 70.1
MsG0380012657.01.T01 AT1G14350 46.774 62 33 0 66 127 23 84 9.33e-13 69.3
MsG0380012657.01.T01 AT1G14350 46.774 62 33 0 66 127 23 84 9.33e-13 69.3
MsG0380012657.01.T01 AT3G28910 55.319 47 21 0 87 133 1 47 2.28e-11 63.9
MsG0380012657.01.T01 AT1G74650 62.500 40 15 0 87 126 1 40 3.27e-11 63.5

Find 139 sgRNAs with CRISPR-Local

Find 239 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCACATTATAATCACCAATT+AGG 0.155481 3:-21987505 None:intergenic
ACTTGTCTTTGTTTATATTT+TGG 0.168716 3:-21988355 None:intergenic
ACTTGTGTTAAACAACTATT+TGG 0.180604 3:-21987344 None:intergenic
ATTAGTTCTTGTTCATTAAT+TGG 0.192848 3:-21987170 None:intergenic
TGATGATCATTATGGGATTT+TGG 0.196511 3:+21987400 MsG0380012657.01.T01:CDS
ATAGAAAGTCTAAGAGAAAT+TGG 0.210756 3:-21988193 None:intergenic
ATTCATTTCCACTCCATTCT+TGG 0.254594 3:+21985400 MsG0380012657.01.T01:CDS
GGCAATATGGTTGATGATAT+TGG 0.254643 3:+21987368 MsG0380012657.01.T01:CDS
CAATTGAAATTTGCTATAAA+AGG 0.254737 3:+21988045 MsG0380012657.01.T01:three_prime_UTR
CTTCATAGTGATGATCATTA+TGG 0.268893 3:+21987392 MsG0380012657.01.T01:CDS
CACATTATAATCACCAATTA+GGG 0.286005 3:-21987504 None:intergenic
TAAAATACCTTATGGAATCT+TGG 0.317280 3:+21988303 MsG0380012657.01.T01:three_prime_UTR
TAGATTAATCTAATGGCTAT+AGG 0.317469 3:+21987993 MsG0380012657.01.T01:three_prime_UTR
ATTTCTCTGTTTGAATTTAA+CGG 0.322359 3:+21987837 MsG0380012657.01.T01:three_prime_UTR
GCAATATGGTTGATGATATT+GGG 0.322671 3:+21987369 MsG0380012657.01.T01:CDS
AACTCCAATGAGGACTTGTT+TGG 0.324640 3:+21987584 MsG0380012657.01.T01:CDS
TATTATTGAAGTGGTTGTTA+TGG 0.328348 3:-21987532 None:intergenic
TTGTTAGACAACAAGGAAAA+TGG 0.336500 3:-21987284 None:intergenic
CAGGTAGACGTGCTGCAATT+TGG 0.342428 3:-21986992 None:intergenic
AGGTAGACGTGCTGCAATTT+GGG 0.345262 3:-21986991 None:intergenic
GGAAATCAAGAGGAGGAAAT+AGG 0.348548 3:-21987681 None:intergenic
TTTAACACAAGTTGGCAATA+TGG 0.356129 3:+21987355 MsG0380012657.01.T01:CDS
TATCTACCACAACATACAAT+TGG 0.357750 3:-21988449 None:intergenic
AATGAGGACTTGTTTGGGTT+TGG 0.361066 3:+21987590 MsG0380012657.01.T01:CDS
TCCACTCCATTCTTGGCAAC+AGG 0.366668 3:+21985407 MsG0380012657.01.T01:CDS
TTTCTCCTTGAATATCTTTG+TGG 0.371969 3:+21987919 MsG0380012657.01.T01:three_prime_UTR
TGGAGTAGAGTTGTTGTTGT+TGG 0.373139 3:-21987075 None:intergenic
AATTTGCTATAAAAGGTAGA+TGG 0.376460 3:+21988052 MsG0380012657.01.T01:three_prime_UTR
AAGAATGGGAGAATGGGATT+TGG 0.378844 3:+21987637 MsG0380012657.01.T01:CDS
GAAGATAAGAGTGCCCTAAT+TGG 0.381814 3:+21987491 MsG0380012657.01.T01:CDS
CTACAGCCGGCTGCACCTTA+AGG 0.383201 3:-21987791 None:intergenic
AAAATTCTTTATTTCATTGT+CGG 0.387116 3:-21987021 None:intergenic
CAGAGGGGACAAGGGGTGAT+TGG 0.388262 3:-21987736 None:intergenic
TGCATTCTTTGTGCCCTTGT+GGG 0.388916 3:+21988535 MsG0380012657.01.T01:three_prime_UTR
TTGTTTGGGTTTGGAAGTCA+TGG 0.392597 3:+21987599 MsG0380012657.01.T01:CDS
GTGAAGATTAAGAGAAATCA+AGG 0.400765 3:-21988162 None:intergenic
ACTCCAATGAGGACTTGTTT+GGG 0.403680 3:+21987585 MsG0380012657.01.T01:CDS
ACAAGGAAAATGGATCAAAT+TGG 0.406250 3:-21987274 None:intergenic
AAAATACCTTATGGAATCTT+GGG 0.410847 3:+21988304 MsG0380012657.01.T01:three_prime_UTR
TTCATAGTGATGATCATTAT+GGG 0.411437 3:+21987393 MsG0380012657.01.T01:CDS
GCAGTGACTAAAATACCTTA+TGG 0.416544 3:+21988295 MsG0380012657.01.T01:three_prime_UTR
TCCGAAGTGTCACTGTTGTT+TGG 0.430031 3:-21987101 None:intergenic
AAAACTTAAGAATGGGAGAA+TGG 0.437647 3:+21987630 MsG0380012657.01.T01:CDS
AATTTAACGGTACGTACAAC+CGG 0.438874 3:+21987850 MsG0380012657.01.T01:three_prime_UTR
CAAAGATATTCAAGGAGAAA+AGG 0.439458 3:-21987916 None:intergenic
TAACTAAAGGACAAGGTTGT+TGG 0.440286 3:+21985254 MsG0380012657.01.T01:CDS
TCTTATGAAGAAGCACTTTG+AGG 0.443236 3:-21985061 None:intergenic
GCAAGCTAAGGAAAGGGTTA+TGG 0.448835 3:+21985194 MsG0380012657.01.T01:CDS
AATGTACCTGTTGCCAAGAA+TGG 0.449357 3:-21985413 None:intergenic
AAACTTAAGAATGGGAGAAT+GGG 0.456783 3:+21987631 MsG0380012657.01.T01:CDS
GAACTAAAGACAAGAAAGAA+TGG 0.462003 3:-21988330 None:intergenic
AAACCCAAACAAGTCCTCAT+TGG 0.462806 3:-21987588 None:intergenic
CTCTCTCTCTAATGCAAATG+AGG 0.464940 3:+21985125 MsG0380012657.01.T01:exon
GAGGAAACCTGATTTGATCA+TGG 0.466267 3:+21985144 MsG0380012657.01.T01:CDS
AATAGTTGTTTAACACAAGT+TGG 0.469190 3:+21987347 MsG0380012657.01.T01:CDS
GTAAAAGTTGCCGTCTTCGT+TGG 0.474947 3:+21985314 MsG0380012657.01.T01:CDS
ATACTCTACAACGAACCTTA+AGG 0.480367 3:+21987776 MsG0380012657.01.T01:three_prime_UTR
ATGCTAATTCTACTTTCTAG+TGG 0.482535 3:-21987467 None:intergenic
GAGAGAGATCAGAGGGGACA+AGG 0.483920 3:-21987745 None:intergenic
GAAAATGGATCAAATTGGTC+AGG 0.485864 3:-21987269 None:intergenic
GATTTCCACAAAGATATTCA+AGG 0.489134 3:-21987924 None:intergenic
AATGGGAGAATGGGATTTGG+AGG 0.489531 3:+21987640 MsG0380012657.01.T01:CDS
TTCAAATGAAATGTGAATAG+TGG 0.489585 3:+21988629 MsG0380012657.01.T01:three_prime_UTR
AGAGATAGAAAGACTTTGAA+AGG 0.490896 3:-21988105 None:intergenic
ACCAACTTCTCATCTTCCTC+AGG 0.492614 3:-21985220 None:intergenic
ATCTACCACAACATACAATT+GGG 0.496280 3:-21988448 None:intergenic
TGAAGCAACTATTATTGAAG+TGG 0.497587 3:-21987541 None:intergenic
ACATATATGTATGAAACAAA+AGG 0.497809 3:-21988378 None:intergenic
AATGCGCCGCGCTTAAGATC+AGG 0.500512 3:-21985352 None:intergenic
CAATTTAGAGAGAGATCAGA+GGG 0.503448 3:-21987752 None:intergenic
CAAATTGCAGCACGTCTACC+TGG 0.503672 3:+21986993 MsG0380012657.01.T01:CDS
CAAAAGAGGCAAATAAATGT+AGG 0.507043 3:+21988666 MsG0380012657.01.T01:three_prime_UTR
GCAAGGAGAAAACTTAAGAA+TGG 0.509485 3:+21987622 MsG0380012657.01.T01:CDS
ACCTGAGGAAGATGAGAAGT+TGG 0.511218 3:+21985219 MsG0380012657.01.T01:CDS
TTGCATTCTTTGTGCCCTTG+TGG 0.514381 3:+21988534 MsG0380012657.01.T01:three_prime_UTR
ATAGAGGACGAGATCCTCTT+CGG 0.515443 3:-21988076 None:intergenic
AGAGAGATCAGAGGGGACAA+GGG 0.521321 3:-21987744 None:intergenic
AGGAAACCTGATTTGATCAT+GGG 0.522620 3:+21985145 MsG0380012657.01.T01:CDS
AGTGACATTGCTAGGAATGC+TGG 0.522915 3:+21985277 MsG0380012657.01.T01:CDS
AACTAAAGACAAGAAAGAAT+GGG 0.525033 3:-21988329 None:intergenic
CTTTGAAAGGATTGTCATAG+AGG 0.528220 3:-21988092 None:intergenic
CAAGGAGAAAACTTAAGAAT+GGG 0.528613 3:+21987623 MsG0380012657.01.T01:CDS
ATGAGAAGACATTGACTTGG+TGG 0.533110 3:-21988219 None:intergenic
CAGGTATAGTTGTCTACAGC+CGG 0.536191 3:-21987804 None:intergenic
AACAAGAGCAAGCTAAGGAA+AGG 0.537747 3:+21985187 MsG0380012657.01.T01:CDS
GTGTCACTGTTGTTTGGAGA+TGG 0.538069 3:-21987095 None:intergenic
GTTGTTGGAGTGACATTGCT+AGG 0.540759 3:+21985269 MsG0380012657.01.T01:CDS
ATTTGCTATAAAAGGTAGAT+GGG 0.543046 3:+21988053 MsG0380012657.01.T01:three_prime_UTR
CTAGGAATGCTGGTCTTCAA+AGG 0.546339 3:+21985287 MsG0380012657.01.T01:CDS
TACAACCCAATTGTATGTTG+TGG 0.547350 3:+21988443 MsG0380012657.01.T01:three_prime_UTR
GTGAGATACATGATAACTAA+AGG 0.553840 3:+21985241 MsG0380012657.01.T01:CDS
GAAAACTTGTCATGTCATAA+CGG 0.554873 3:-21987307 None:intergenic
AATGAAAAGACAATTAAACT+TGG 0.554955 3:-21987702 None:intergenic
ACAAGAGCAAGCTAAGGAAA+GGG 0.557354 3:+21985188 MsG0380012657.01.T01:CDS
ACCAAGTCAATGTCTTCTCA+TGG 0.559396 3:+21988221 MsG0380012657.01.T01:three_prime_UTR
ATTACACAAAGTGCTTTACA+AGG 0.561207 3:-21988561 None:intergenic
ATTCATCTTTACAATGCAGC+CGG 0.565105 3:-21987869 None:intergenic
ATGGGAGAATGGGATTTGGA+GGG 0.566954 3:+21987641 MsG0380012657.01.T01:CDS
ATGCATGTGCATGGATTGCA+TGG 0.568158 3:-21987234 None:intergenic
AGTAATTAATCCAACGAAGA+CGG 0.569053 3:-21985324 None:intergenic
TGGGTGCCCAAGATTCCATA+AGG 0.570181 3:-21988310 None:intergenic
GGGTTTGGAAGTCATGGGCA+AGG 0.571571 3:+21987605 MsG0380012657.01.T01:CDS
AACGAACCTTAAGGTGCAGC+CGG 0.573342 3:+21987785 MsG0380012657.01.T01:three_prime_UTR
AGAACTAATGACATTATGCA+TGG 0.576802 3:+21987184 MsG0380012657.01.T01:CDS
CTAATTCTACTTTCTAGTGG+AGG 0.578837 3:-21987464 None:intergenic
TTCAAGGAGAAAAGGAAGAG+TGG 0.581796 3:-21987908 None:intergenic
ATTTCATTGTCGGTACGACC+AGG 0.583529 3:-21987011 None:intergenic
AACCATGGTATGCATGTGCA+TGG 0.586474 3:-21987243 None:intergenic
TCCAAACAACAGTGACACTT+CGG 0.586789 3:+21987100 MsG0380012657.01.T01:CDS
ATGATGAGTTCTTCCTCTTG+TGG 0.593884 3:-21985379 None:intergenic
TCATTTAGAAATGTCAAAAG+AGG 0.599559 3:+21988652 MsG0380012657.01.T01:three_prime_UTR
TGTTTGGGTTTGGAAGTCAT+GGG 0.599593 3:+21987600 MsG0380012657.01.T01:CDS
GAGAGATCAGAGGGGACAAG+GGG 0.603225 3:-21987743 None:intergenic
TTAGCAGTGTTTATAGCACT+AGG 0.605228 3:+21988706 MsG0380012657.01.T01:three_prime_UTR
TAGGTAATACTATACACCGT+TGG 0.605293 3:+21988012 MsG0380012657.01.T01:three_prime_UTR
CAATTGTTGAATTAATCCAA+CGG 0.606586 3:-21988028 None:intergenic
AAAAGGTAGATGGGCCGAAG+AGG 0.611350 3:+21988062 MsG0380012657.01.T01:three_prime_UTR
TCAATTTAGAGAGAGATCAG+AGG 0.614125 3:-21987753 None:intergenic
TGATGATGAAGTTGATGATG+AGG 0.619533 3:-21987210 None:intergenic
AATTAAACTTGGAAATCAAG+AGG 0.628285 3:-21987691 None:intergenic
ACATTAACAAGAGCAAGCTA+AGG 0.643937 3:+21985182 MsG0380012657.01.T01:CDS
CATTGTAAAGATGAATGTAG+AGG 0.647469 3:+21987876 MsG0380012657.01.T01:three_prime_UTR
GCTTTACAAGGAAACCCACA+AGG 0.648903 3:-21988549 None:intergenic
ATAACGGTTGTTAGACAACA+AGG 0.651413 3:-21987291 None:intergenic
ACCATGAGAAGACATTGACT+TGG 0.652709 3:-21988222 None:intergenic
AATGCTGGTCTTCAAAGGTG+TGG 0.659770 3:+21985292 MsG0380012657.01.T01:CDS
ATCCATGCACATGCATACCA+TGG 0.661611 3:+21987241 MsG0380012657.01.T01:CDS
TTGAGACCTGATCTTAAGCG+CGG 0.663731 3:+21985346 MsG0380012657.01.T01:CDS
TCACATTCAAAACTCCAATG+AGG 0.667734 3:+21987574 MsG0380012657.01.T01:CDS
AGGTTGGTACAAATAATCAA+AGG 0.668289 3:+21988596 MsG0380012657.01.T01:three_prime_UTR
ACCTGTTGCCAAGAATGGAG+TGG 0.673651 3:-21985408 None:intergenic
TAAACTTGGAAATCAAGAGG+AGG 0.676931 3:-21987688 None:intergenic
GAAAGGGTTATGGTCACCTG+AGG 0.691016 3:+21985204 MsG0380012657.01.T01:CDS
TACATGATAACTAAAGGACA+AGG 0.710610 3:+21985247 MsG0380012657.01.T01:CDS
AAATTGGTCAGGTAAAACCA+TGG 0.714456 3:-21987258 None:intergenic
GGAAGTAAGAGGGGTCATAG+CGG 0.749256 3:-21987951 None:intergenic
TTATAGCACTAGGAACAATG+TGG 0.760025 3:+21988716 MsG0380012657.01.T01:three_prime_UTR
CTTTACAAGGAAACCCACAA+GGG 0.761370 3:-21988548 None:intergenic
AATTTAGAGAGAGATCAGAG+GGG 0.786735 3:-21987751 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAAATATTTTAAAAAAATTA+AGG - Chr3:21986196-21986215 None:intergenic 0.0%
!!! AAATATTTTAAAAAAATTAA+GGG - Chr3:21986195-21986214 None:intergenic 0.0%
!!! AATATTATATTTTTTTTTTT+TGG + Chr3:21985916-21985935 MsG0380012657.01.T01:intron 0.0%
!!! TTTTTTAAAATATTTTAATT+AGG + Chr3:21986200-21986219 MsG0380012657.01.T01:intron 0.0%
!! AAAGTGAATTAAAAAAATAT+AGG - Chr3:21986620-21986639 None:intergenic 10.0%
!! ATAAATAAAGTTGTTAAAAA+AGG + Chr3:21986682-21986701 MsG0380012657.01.T01:intron 10.0%
!! TATATACATATAGAATAATT+TGG + Chr3:21986327-21986346 MsG0380012657.01.T01:intron 10.0%
!!! AACTTTTTTTTTTTTTTTGA+GGG + Chr3:21986395-21986414 MsG0380012657.01.T01:intron 10.0%
!!! TATTTATTATTACATCTTTT+GGG - Chr3:21986669-21986688 None:intergenic 10.0%
!!! TTATTTATTATTACATCTTT+TGG - Chr3:21986670-21986689 None:intergenic 10.0%
!! AAATTATAAGGAAATATTGA+AGG + Chr3:21986791-21986810 MsG0380012657.01.T01:intron 15.0%
!! AATAATTTATAAGTTTAGAG+TGG + Chr3:21986830-21986849 MsG0380012657.01.T01:intron 15.0%
!! ATTAAATTAAAAATCGTAAC+TGG - Chr3:21986750-21986769 None:intergenic 15.0%
!! CTCAAAAAAAAAAAAAAAGT+TGG - Chr3:21986396-21986415 None:intergenic 15.0%
!! GTTATTCAAAAAAACAATTA+CGG - Chr3:21985548-21985567 None:intergenic 15.0%
!! TCATGTTACAAAAAATTATA+AGG + Chr3:21986779-21986798 MsG0380012657.01.T01:intron 15.0%
!! TTATAACTTCTTGATTAATA+AGG - Chr3:21985813-21985832 None:intergenic 15.0%
!! TTGAAATTTGATTGAAAATA+GGG + Chr3:21986364-21986383 MsG0380012657.01.T01:intron 15.0%
!!! AAAATTCTTTATTTCATTGT+CGG - Chr3:21987024-21987043 None:intergenic 15.0%
!!! ACAATGAAATAAAGAATTTT+TGG + Chr3:21987024-21987043 MsG0380012657.01.T01:CDS 15.0%
!!! AGTGTAACTTTTTTTTTATA+TGG + Chr3:21986894-21986913 MsG0380012657.01.T01:intron 15.0%
!!! ATATTCATTTTGTTATTGAA+TGG - Chr3:21985847-21985866 None:intergenic 15.0%
!!! CAACTTTTTTTTTTTTTTTG+AGG + Chr3:21986394-21986413 MsG0380012657.01.T01:intron 15.0%
!!! TATTTTTTTTTATCTCTCAA+AGG - Chr3:21985718-21985737 None:intergenic 15.0%
!! AAAGAAGAAAAATCCAAAAT+AGG - Chr3:21986933-21986952 None:intergenic 20.0%
!! AAATGCTAATAATTGAAGAA+GGG - Chr3:21986863-21986882 None:intergenic 20.0%
!! AATGAAAAGACAATTAAACT+TGG - Chr3:21987705-21987724 None:intergenic 20.0%
!! ACATATATGTATGAAACAAA+AGG - Chr3:21988381-21988400 None:intergenic 20.0%
!! ACATCAAAAACATTATCTAT+TGG - Chr3:21987131-21987150 None:intergenic 20.0%
!! ATAAATCTTAAGATCTTAGT+GGG - Chr3:21986304-21986323 None:intergenic 20.0%
!! ATTTCTCTGTTTGAATTTAA+CGG + Chr3:21987837-21987856 MsG0380012657.01.T01:three_prime_UTR 20.0%
!! GTTGAAATTTGATTGAAAAT+AGG + Chr3:21986363-21986382 MsG0380012657.01.T01:intron 20.0%
!! TATAAATCTTAAGATCTTAG+TGG - Chr3:21986305-21986324 None:intergenic 20.0%
!! TATCAATTTCAGTAAAACAA+TGG - Chr3:21985755-21985774 None:intergenic 20.0%
!! TCACTTTGATATTTATTTGA+TGG + Chr3:21986633-21986652 MsG0380012657.01.T01:intron 20.0%
!! TTCAAAAAACAAATCTTGAA+GGG + Chr3:21985645-21985664 MsG0380012657.01.T01:intron 20.0%
!! TTTCAAAAAACAAATCTTGA+AGG + Chr3:21985644-21985663 MsG0380012657.01.T01:intron 20.0%
!!! ACTTGTCTTTGTTTATATTT+TGG - Chr3:21988358-21988377 None:intergenic 20.0%
!!! ATTAGTTCTTGTTCATTAAT+TGG - Chr3:21987173-21987192 None:intergenic 20.0%
!!! ATTTTGGATTTTTCTTCTTT+CGG + Chr3:21986933-21986952 MsG0380012657.01.T01:intron 20.0%
!!! CAATTGAAATTTGCTATAAA+AGG + Chr3:21988045-21988064 MsG0380012657.01.T01:three_prime_UTR 20.0%
!!! GTTTGTTATATTTTAGTGTT+AGG + Chr3:21988747-21988766 MsG0380012657.01.T01:three_prime_UTR 20.0%
!!! TGAATTATGGTTTTAAATTG+TGG - Chr3:21985585-21985604 None:intergenic 20.0%
!!! TTAATAAGTGTAACCTATTT+TGG + Chr3:21986917-21986936 MsG0380012657.01.T01:intron 20.0%
!!! TTGCTTGAATACTTTTTTAT+TGG - Chr3:21985898-21985917 None:intergenic 20.0%
!!! TTTTTTTTTTTTTGAGGGAA+GGG + Chr3:21986400-21986419 MsG0380012657.01.T01:intron 20.0%
!!! TTTTTTTTTTTTTTGAGGGA+AGG + Chr3:21986399-21986418 MsG0380012657.01.T01:intron 20.0%
! AAAATACCTTATGGAATCTT+GGG + Chr3:21988304-21988323 MsG0380012657.01.T01:three_prime_UTR 25.0%
! AACTAAAGACAAGAAAGAAT+GGG - Chr3:21988332-21988351 None:intergenic 25.0%
! AATAGTTGTTTAACACAAGT+TGG + Chr3:21987347-21987366 MsG0380012657.01.T01:CDS 25.0%
! AATTAAACTTGGAAATCAAG+AGG - Chr3:21987694-21987713 None:intergenic 25.0%
! ACTTGTGTTAAACAACTATT+TGG - Chr3:21987347-21987366 None:intergenic 25.0%
! ATAGAAAGTCTAAGAGAAAT+TGG - Chr3:21988196-21988215 None:intergenic 25.0%
! ATGTAAGTTAAACTTTCATC+TGG - Chr3:21986236-21986255 None:intergenic 25.0%
! ATTTGATTGAAAATAGGGTT+TGG + Chr3:21986369-21986388 MsG0380012657.01.T01:intron 25.0%
! CAATTGTTGAATTAATCCAA+CGG - Chr3:21988031-21988050 None:intergenic 25.0%
! CACATTATAATCACCAATTA+GGG - Chr3:21987507-21987526 None:intergenic 25.0%
! GAAATGCTAATAATTGAAGA+AGG - Chr3:21986864-21986883 None:intergenic 25.0%
! TAAAATACCTTATGGAATCT+TGG + Chr3:21988303-21988322 MsG0380012657.01.T01:three_prime_UTR 25.0%
! TAAATCTTAAGATCTTAGTG+GGG - Chr3:21986303-21986322 None:intergenic 25.0%
! TAGATTAATCTAATGGCTAT+AGG + Chr3:21987993-21988012 MsG0380012657.01.T01:three_prime_UTR 25.0%
! TATTATTGAAGTGGTTGTTA+TGG - Chr3:21987535-21987554 None:intergenic 25.0%
! TCAAAAAACAAATCTTGAAG+GGG + Chr3:21985646-21985665 MsG0380012657.01.T01:intron 25.0%
! TCACATTATAATCACCAATT+AGG - Chr3:21987508-21987527 None:intergenic 25.0%
! TCATTTAGAAATGTCAAAAG+AGG + Chr3:21988652-21988671 MsG0380012657.01.T01:three_prime_UTR 25.0%
! TTACTATAAACAATCTCAGA+TGG + Chr3:21986967-21986986 MsG0380012657.01.T01:intron 25.0%
! TTCAAATGAAATGTGAATAG+TGG + Chr3:21988629-21988648 MsG0380012657.01.T01:three_prime_UTR 25.0%
! TTCATAGTGATGATCATTAT+GGG + Chr3:21987393-21987412 MsG0380012657.01.T01:CDS 25.0%
!! AAGCACTTTGTGTAATTTTT+CGG + Chr3:21988568-21988587 MsG0380012657.01.T01:three_prime_UTR 25.0%
!! CAGCTTTTAGATTAATCTAA+TGG + Chr3:21987986-21988005 MsG0380012657.01.T01:three_prime_UTR 25.0%
!! GACATTTTGTATATGCAAAT+TGG - Chr3:21988261-21988280 None:intergenic 25.0%
!! TATTTTCATATTTGAACCCT+AGG + Chr3:21985478-21985497 MsG0380012657.01.T01:intron 25.0%
!!! AATTTGCTATAAAAGGTAGA+TGG + Chr3:21988052-21988071 MsG0380012657.01.T01:three_prime_UTR 25.0%
!!! ACATTCATTGTTTCTTTTCT+TGG + Chr3:21988410-21988429 MsG0380012657.01.T01:three_prime_UTR 25.0%
!!! ATTTGCTATAAAAGGTAGAT+GGG + Chr3:21988053-21988072 MsG0380012657.01.T01:three_prime_UTR 25.0%
!!! ATTTTAGTGTTAGGTGATAT+AGG + Chr3:21988756-21988775 MsG0380012657.01.T01:three_prime_UTR 25.0%
!!! ATTTTGGAGGCTAATAAAAT+GGG + Chr3:21987416-21987435 MsG0380012657.01.T01:CDS 25.0%
!!! TAGTTTTGCAATGAAAATTG+CGG + Chr3:21988480-21988499 MsG0380012657.01.T01:three_prime_UTR 25.0%
!!! TTCTCATTTTTTTGAGAGAA+GGG - Chr3:21986059-21986078 None:intergenic 25.0%
AAAACTTAAGAATGGGAGAA+TGG + Chr3:21987630-21987649 MsG0380012657.01.T01:CDS 30.0%
AAACTTAAGAATGGGAGAAT+GGG + Chr3:21987631-21987650 MsG0380012657.01.T01:CDS 30.0%
AAATCTTAAGATCTTAGTGG+GGG - Chr3:21986302-21986321 None:intergenic 30.0%
ACAAGGAAAATGGATCAAAT+TGG - Chr3:21987277-21987296 None:intergenic 30.0%
AGAACTAATGACATTATGCA+TGG + Chr3:21987184-21987203 MsG0380012657.01.T01:CDS 30.0%
AGAGATAGAAAGACTTTGAA+AGG - Chr3:21988108-21988127 None:intergenic 30.0%
AGTAATTAATCCAACGAAGA+CGG - Chr3:21985327-21985346 None:intergenic 30.0%
ATCCTAAAATGTAACCAATC+TGG + Chr3:21986082-21986101 MsG0380012657.01.T01:intron 30.0%
ATCTACCACAACATACAATT+GGG - Chr3:21988451-21988470 None:intergenic 30.0%
ATGCTAATTCTACTTTCTAG+TGG - Chr3:21987470-21987489 None:intergenic 30.0%
CAAAAGAGGCAAATAAATGT+AGG + Chr3:21988666-21988685 MsG0380012657.01.T01:three_prime_UTR 30.0%
CAAAGATATTCAAGGAGAAA+AGG - Chr3:21987919-21987938 None:intergenic 30.0%
CAAGGAGAAAACTTAAGAAT+GGG + Chr3:21987623-21987642 MsG0380012657.01.T01:CDS 30.0%
CAGATTCTAAACCGTTTAAA+GGG + Chr3:21986162-21986181 MsG0380012657.01.T01:intron 30.0%
CATTGTAAAGATGAATGTAG+AGG + Chr3:21987876-21987895 MsG0380012657.01.T01:three_prime_UTR 30.0%
CTTCATAGTGATGATCATTA+TGG + Chr3:21987392-21987411 MsG0380012657.01.T01:CDS 30.0%
GAAAACTTGTCATGTCATAA+CGG - Chr3:21987310-21987329 None:intergenic 30.0%
GAACTAAAGACAAGAAAGAA+TGG - Chr3:21988333-21988352 None:intergenic 30.0%
GATTTCCACAAAGATATTCA+AGG - Chr3:21987927-21987946 None:intergenic 30.0%
GTGAAGATTAAGAGAAATCA+AGG - Chr3:21988165-21988184 None:intergenic 30.0%
GTGAGATACATGATAACTAA+AGG + Chr3:21985241-21985260 MsG0380012657.01.T01:CDS 30.0%
TAATATGTAACACAGACAGT+TGG - Chr3:21986432-21986451 None:intergenic 30.0%
TACATGATAACTAAAGGACA+AGG + Chr3:21985247-21985266 MsG0380012657.01.T01:CDS 30.0%
TATCTACCACAACATACAAT+TGG - Chr3:21988452-21988471 None:intergenic 30.0%
TGAAGCAACTATTATTGAAG+TGG - Chr3:21987544-21987563 None:intergenic 30.0%
TTGTTAGACAACAAGGAAAA+TGG - Chr3:21987287-21987306 None:intergenic 30.0%
TTTCTCCTTGAATATCTTTG+TGG + Chr3:21987919-21987938 MsG0380012657.01.T01:three_prime_UTR 30.0%
! ATTACACAAAGTGCTTTACA+AGG - Chr3:21988564-21988583 None:intergenic 30.0%
! ATTTTACTGAGGAAGTAAGA+GGG - Chr3:21987964-21987983 None:intergenic 30.0%
! CAGAGAAATTTTCTCTATTC+AGG - Chr3:21987826-21987845 None:intergenic 30.0%
! TAAAAGCTGAGATTTTACTG+AGG - Chr3:21987975-21987994 None:intergenic 30.0%
! TGATGATCATTATGGGATTT+TGG + Chr3:21987400-21987419 MsG0380012657.01.T01:CDS 30.0%
! TTTAACACAAGTTGGCAATA+TGG + Chr3:21987355-21987374 MsG0380012657.01.T01:CDS 30.0%
! TTTCAATCTTTTCTTCAGTG+TGG - Chr3:21987054-21987073 None:intergenic 30.0%
!! AGGTTGGTACAAATAATCAA+AGG + Chr3:21988596-21988615 MsG0380012657.01.T01:three_prime_UTR 30.0%
!! GATTTTGGAGGCTAATAAAA+TGG + Chr3:21987415-21987434 MsG0380012657.01.T01:CDS 30.0%
!! GCAATATGGTTGATGATATT+GGG + Chr3:21987369-21987388 MsG0380012657.01.T01:CDS 30.0%
!! TAATTTTTCGGTATGTAGGT+TGG + Chr3:21988580-21988599 MsG0380012657.01.T01:three_prime_UTR 30.0%
!! TCATAAAGCATCGATTATTG+AGG + Chr3:21986556-21986575 MsG0380012657.01.T01:intron 30.0%
!! TGTGTAATTTTTCGGTATGT+AGG + Chr3:21988576-21988595 MsG0380012657.01.T01:three_prime_UTR 30.0%
!! TTTTGGAGGCTAATAAAATG+GGG + Chr3:21987417-21987436 MsG0380012657.01.T01:CDS 30.0%
!!! CTTCTCATTTTTTTGAGAGA+AGG - Chr3:21986060-21986079 None:intergenic 30.0%
AAATTGGTCAGGTAAAACCA+TGG - Chr3:21987261-21987280 None:intergenic 35.0%
AAGACCGCAATTTATAGCTA+TGG - Chr3:21985522-21985541 None:intergenic 35.0%
AATCTTAAGATCTTAGTGGG+GGG - Chr3:21986301-21986320 None:intergenic 35.0%
AATTTAACGGTACGTACAAC+CGG + Chr3:21987850-21987869 MsG0380012657.01.T01:three_prime_UTR 35.0%
AATTTAGAGAGAGATCAGAG+GGG - Chr3:21987754-21987773 None:intergenic 35.0%
ACATGCATATTCATCGCATA+AGG + Chr3:21986252-21986271 MsG0380012657.01.T01:intron 35.0%
ACATTAACAAGAGCAAGCTA+AGG + Chr3:21985182-21985201 MsG0380012657.01.T01:CDS 35.0%
AGAATCTGCTATTGCTATGA+AGG - Chr3:21986150-21986169 None:intergenic 35.0%
AGGGTACATTTCCCTTTAAA+CGG - Chr3:21986176-21986195 None:intergenic 35.0%
ATAACGGTTGTTAGACAACA+AGG - Chr3:21987294-21987313 None:intergenic 35.0%
ATACTCTACAACGAACCTTA+AGG + Chr3:21987776-21987795 MsG0380012657.01.T01:three_prime_UTR 35.0%
ATTCATCTTTACAATGCAGC+CGG - Chr3:21987872-21987891 None:intergenic 35.0%
ATTCATTTCCACTCCATTCT+TGG + Chr3:21985400-21985419 MsG0380012657.01.T01:CDS 35.0%
CAAAGATACTCTTAGTTGAG+AGG + Chr3:21985620-21985639 MsG0380012657.01.T01:intron 35.0%
CAATTTAGAGAGAGATCAGA+GGG - Chr3:21987755-21987774 None:intergenic 35.0%
CACACCATAGCTATAAATTG+CGG + Chr3:21985515-21985534 MsG0380012657.01.T01:intron 35.0%
GAAAATGGATCAAATTGGTC+AGG - Chr3:21987272-21987291 None:intergenic 35.0%
GCAAGGAGAAAACTTAAGAA+TGG + Chr3:21987622-21987641 MsG0380012657.01.T01:CDS 35.0%
GCAGATTCTAAACCGTTTAA+AGG + Chr3:21986161-21986180 MsG0380012657.01.T01:intron 35.0%
GCAGTGACTAAAATACCTTA+TGG + Chr3:21988295-21988314 MsG0380012657.01.T01:three_prime_UTR 35.0%
GGCAGCATTAGCTATTATTA+AGG + Chr3:21986502-21986521 MsG0380012657.01.T01:intron 35.0%
GGTCTATAGCTTTCAACTTA+AGG + Chr3:21986523-21986542 MsG0380012657.01.T01:intron 35.0%
TAAACTTGGAAATCAAGAGG+AGG - Chr3:21987691-21987710 None:intergenic 35.0%
TAACTAAAGGACAAGGTTGT+TGG + Chr3:21985254-21985273 MsG0380012657.01.T01:CDS 35.0%
TACAACCCAATTGTATGTTG+TGG + Chr3:21988443-21988462 MsG0380012657.01.T01:three_prime_UTR 35.0%
TAGGTAATACTATACACCGT+TGG + Chr3:21988012-21988031 MsG0380012657.01.T01:three_prime_UTR 35.0%
TCAATTTAGAGAGAGATCAG+AGG - Chr3:21987756-21987775 None:intergenic 35.0%
TCACATTCAAAACTCCAATG+AGG + Chr3:21987574-21987593 MsG0380012657.01.T01:CDS 35.0%
TCCAACAAGACTACTTTGAA+AGG + Chr3:21985686-21985705 MsG0380012657.01.T01:intron 35.0%
TTAGCAGTGTTTATAGCACT+AGG + Chr3:21988706-21988725 MsG0380012657.01.T01:three_prime_UTR 35.0%
TTATAGCACTAGGAACAATG+TGG + Chr3:21988716-21988735 MsG0380012657.01.T01:three_prime_UTR 35.0%
! AGGAAACCTGATTTGATCAT+GGG + Chr3:21985145-21985164 MsG0380012657.01.T01:CDS 35.0%
! CTAATTCTACTTTCTAGTGG+AGG - Chr3:21987467-21987486 None:intergenic 35.0%
! CTTTGAAAGGATTGTCATAG+AGG - Chr3:21988095-21988114 None:intergenic 35.0%
! GATTTTACTGAGGAAGTAAG+AGG - Chr3:21987965-21987984 None:intergenic 35.0%
! TATAAGCATGCTAGGGTTTT+TGG + Chr3:21986481-21986500 MsG0380012657.01.T01:intron 35.0%
! TCTTTTCCCATGATCAAATC+AGG - Chr3:21985154-21985173 None:intergenic 35.0%
! TGATCATTATGGGATTTTGG+AGG + Chr3:21987403-21987422 MsG0380012657.01.T01:CDS 35.0%
! TTTTACTGAGGAAGTAAGAG+GGG - Chr3:21987963-21987982 None:intergenic 35.0%
!! GGCAATATGGTTGATGATAT+TGG + Chr3:21987368-21987387 MsG0380012657.01.T01:CDS 35.0%
!! GTCCAGATTGGTTACATTTT+AGG - Chr3:21986087-21986106 None:intergenic 35.0%
!! TCCTTTCAAAGTAGTCTTGT+TGG - Chr3:21985690-21985709 None:intergenic 35.0%
!! TCTTATGAAGAAGCACTTTG+AGG - Chr3:21985064-21985083 None:intergenic 35.0%
!! TGATGATGAAGTTGATGATG+AGG - Chr3:21987213-21987232 None:intergenic 35.0%
!! TGGACTAGTTAAATGACCTA+GGG - Chr3:21985497-21985516 None:intergenic 35.0%
!!! TTTTTTTTGAGGGAAGGGTT+TGG + Chr3:21986405-21986424 MsG0380012657.01.T01:intron 35.0%
AAACCCAAACAAGTCCTCAT+TGG - Chr3:21987591-21987610 None:intergenic 40.0%
AACAAGAGCAAGCTAAGGAA+AGG + Chr3:21985187-21985206 MsG0380012657.01.T01:CDS 40.0%
AAGAATGGGAGAATGGGATT+TGG + Chr3:21987637-21987656 MsG0380012657.01.T01:CDS 40.0%
AATGTACCTGTTGCCAAGAA+TGG - Chr3:21985416-21985435 None:intergenic 40.0%
ACAAGAGCAAGCTAAGGAAA+GGG + Chr3:21985188-21985207 MsG0380012657.01.T01:CDS 40.0%
ACCAAGTCAATGTCTTCTCA+TGG + Chr3:21988221-21988240 MsG0380012657.01.T01:three_prime_UTR 40.0%
ACGTAGCATATAAGCATGCT+AGG + Chr3:21986473-21986492 MsG0380012657.01.T01:intron 40.0%
ATCTTAAGATCTTAGTGGGG+GGG - Chr3:21986300-21986319 None:intergenic 40.0%
ATGATGAGTTCTTCCTCTTG+TGG - Chr3:21985382-21985401 None:intergenic 40.0%
CGCAATTTATAGCTATGGTG+TGG - Chr3:21985517-21985536 None:intergenic 40.0%
CGTAGCATATAAGCATGCTA+GGG + Chr3:21986474-21986493 MsG0380012657.01.T01:intron 40.0%
CTCTCTCTCTAATGCAAATG+AGG + Chr3:21985125-21985144 MsG0380012657.01.T01:exon 40.0%
CTTTACAAGGAAACCCACAA+GGG - Chr3:21988551-21988570 None:intergenic 40.0%
GCAGTGAAAATTGTCCAGAT+TGG - Chr3:21986099-21986118 None:intergenic 40.0%
GCATTCTGACGTGTGAATTA+TGG - Chr3:21985598-21985617 None:intergenic 40.0%
GGAAATCAAGAGGAGGAAAT+AGG - Chr3:21987684-21987703 None:intergenic 40.0%
TCCAAACAACAGTGACACTT+CGG + Chr3:21987100-21987119 MsG0380012657.01.T01:CDS 40.0%
TTCAAGGAGAAAAGGAAGAG+TGG - Chr3:21987911-21987930 None:intergenic 40.0%
! AACTCCAATGAGGACTTGTT+TGG + Chr3:21987584-21987603 MsG0380012657.01.T01:CDS 40.0%
! AATGAGGACTTGTTTGGGTT+TGG + Chr3:21987590-21987609 MsG0380012657.01.T01:CDS 40.0%
! ACCATGAGAAGACATTGACT+TGG - Chr3:21988225-21988244 None:intergenic 40.0%
! ACTCCAATGAGGACTTGTTT+GGG + Chr3:21987585-21987604 MsG0380012657.01.T01:CDS 40.0%
! GAGGAAACCTGATTTGATCA+TGG + Chr3:21985144-21985163 MsG0380012657.01.T01:CDS 40.0%
! TGGAGTAGAGTTGTTGTTGT+TGG - Chr3:21987078-21987097 None:intergenic 40.0%
! TGTTTGGGTTTGGAAGTCAT+GGG + Chr3:21987600-21987619 MsG0380012657.01.T01:CDS 40.0%
! TTGTTTGGGTTTGGAAGTCA+TGG + Chr3:21987599-21987618 MsG0380012657.01.T01:CDS 40.0%
!! ATGAGAAGACATTGACTTGG+TGG - Chr3:21988222-21988241 None:intergenic 40.0%
!! GAAGATAAGAGTGCCCTAAT+TGG + Chr3:21987491-21987510 MsG0380012657.01.T01:CDS 40.0%
!! GTGGACTAGTTAAATGACCT+AGG - Chr3:21985498-21985517 None:intergenic 40.0%
AACCATGGTATGCATGTGCA+TGG - Chr3:21987246-21987265 None:intergenic 45.0%
AATGGGAGAATGGGATTTGG+AGG + Chr3:21987640-21987659 MsG0380012657.01.T01:CDS 45.0%
ACCAACTTCTCATCTTCCTC+AGG - Chr3:21985223-21985242 None:intergenic 45.0%
ACCTGAGGAAGATGAGAAGT+TGG + Chr3:21985219-21985238 MsG0380012657.01.T01:CDS 45.0%
AGGTAGACGTGCTGCAATTT+GGG - Chr3:21986994-21987013 None:intergenic 45.0%
AGTGACATTGCTAGGAATGC+TGG + Chr3:21985277-21985296 MsG0380012657.01.T01:CDS 45.0%
ATAGAGGACGAGATCCTCTT+CGG - Chr3:21988079-21988098 None:intergenic 45.0%
ATCCATGCACATGCATACCA+TGG + Chr3:21987241-21987260 MsG0380012657.01.T01:CDS 45.0%
ATGGGAGAATGGGATTTGGA+GGG + Chr3:21987641-21987660 MsG0380012657.01.T01:CDS 45.0%
ATTTCATTGTCGGTACGACC+AGG - Chr3:21987014-21987033 None:intergenic 45.0%
CAGGTATAGTTGTCTACAGC+CGG - Chr3:21987807-21987826 None:intergenic 45.0%
GCAAGCTAAGGAAAGGGTTA+TGG + Chr3:21985194-21985213 MsG0380012657.01.T01:CDS 45.0%
GCTTTACAAGGAAACCCACA+AGG - Chr3:21988552-21988571 None:intergenic 45.0%
GTAAAAGTTGCCGTCTTCGT+TGG + Chr3:21985314-21985333 MsG0380012657.01.T01:CDS 45.0%
GTTGTTGGAGTGACATTGCT+AGG + Chr3:21985269-21985288 MsG0380012657.01.T01:CDS 45.0%
TGCATTCTTTGTGCCCTTGT+GGG + Chr3:21988535-21988554 MsG0380012657.01.T01:three_prime_UTR 45.0%
TTGAGACCTGATCTTAAGCG+CGG + Chr3:21985346-21985365 MsG0380012657.01.T01:CDS 45.0%
TTGCATTCTTTGTGCCCTTG+TGG + Chr3:21988534-21988553 MsG0380012657.01.T01:three_prime_UTR 45.0%
! ATGCATGTGCATGGATTGCA+TGG - Chr3:21987237-21987256 None:intergenic 45.0%
! GTGTCACTGTTGTTTGGAGA+TGG - Chr3:21987098-21987117 None:intergenic 45.0%
! TCCGAAGTGTCACTGTTGTT+TGG - Chr3:21987104-21987123 None:intergenic 45.0%
!! AATGCTGGTCTTCAAAGGTG+TGG + Chr3:21985292-21985311 MsG0380012657.01.T01:CDS 45.0%
!! CTAGGAATGCTGGTCTTCAA+AGG + Chr3:21985287-21985306 MsG0380012657.01.T01:CDS 45.0%
!! AATTAATTATTTATTTCAAA+AGG + Chr3:21985985-21986004 MsG0380012657.01.T01:intron 5.0%
!! ATTAATTATTTATTTCAAAA+GGG + Chr3:21985986-21986005 MsG0380012657.01.T01:intron 5.0%
AAAAGGTAGATGGGCCGAAG+AGG + Chr3:21988062-21988081 MsG0380012657.01.T01:three_prime_UTR 50.0%
AACGAACCTTAAGGTGCAGC+CGG + Chr3:21987785-21987804 MsG0380012657.01.T01:three_prime_UTR 50.0%
ACCTGTTGCCAAGAATGGAG+TGG - Chr3:21985411-21985430 None:intergenic 50.0%
AGAGAGATCAGAGGGGACAA+GGG - Chr3:21987747-21987766 None:intergenic 50.0%
CAAATTGCAGCACGTCTACC+TGG + Chr3:21986993-21987012 MsG0380012657.01.T01:CDS 50.0%
CAGGTAGACGTGCTGCAATT+TGG - Chr3:21986995-21987014 None:intergenic 50.0%
GAAAGGGTTATGGTCACCTG+AGG + Chr3:21985204-21985223 MsG0380012657.01.T01:CDS 50.0%
GGAAGTAAGAGGGGTCATAG+CGG - Chr3:21987954-21987973 None:intergenic 50.0%
TCCACTCCATTCTTGGCAAC+AGG + Chr3:21985407-21985426 MsG0380012657.01.T01:CDS 50.0%
TGGGTGCCCAAGATTCCATA+AGG - Chr3:21988313-21988332 None:intergenic 50.0%
TTGAGGTCTGTCTTGTGCAG+TGG + Chr3:21986573-21986592 MsG0380012657.01.T01:intron 50.0%
AATGCGCCGCGCTTAAGATC+AGG - Chr3:21985355-21985374 None:intergenic 55.0%
GAGAGAGATCAGAGGGGACA+AGG - Chr3:21987748-21987767 None:intergenic 55.0%
GAGAGATCAGAGGGGACAAG+GGG - Chr3:21987746-21987765 None:intergenic 55.0%
GGGTTTGGAAGTCATGGGCA+AGG + Chr3:21987605-21987624 MsG0380012657.01.T01:CDS 55.0%
CAGAGGGGACAAGGGGTGAT+TGG - Chr3:21987739-21987758 None:intergenic 60.0%
CTACAGCCGGCTGCACCTTA+AGG - Chr3:21987794-21987813 None:intergenic 60.0%
! CGGCGCATTTTCGCCACAAG+AGG + Chr3:21985366-21985385 MsG0380012657.01.T01:CDS 60.0%
Chromosome Type Strat End Strand Name
Chr3 gene 21985039 21988839 21985039 ID=MsG0380012657.01;Name=MsG0380012657.01
Chr3 mRNA 21985039 21988839 21985039 ID=MsG0380012657.01.T01;Parent=MsG0380012657.01;Name=MsG0380012657.01.T01;_AED=0.25;_eAED=0.25;_QI=97|1|1|1|1|1|2|1064|360
Chr3 exon 21985039 21985428 21985039 ID=MsG0380012657.01.T01:exon:8056;Parent=MsG0380012657.01.T01
Chr3 exon 21986986 21988839 21986986 ID=MsG0380012657.01.T01:exon:8057;Parent=MsG0380012657.01.T01
Chr3 five_prime_UTR 21985039 21985135 21985039 ID=MsG0380012657.01.T01:five_prime_utr;Parent=MsG0380012657.01.T01
Chr3 CDS 21985136 21985428 21985136 ID=MsG0380012657.01.T01:cds;Parent=MsG0380012657.01.T01
Chr3 CDS 21986986 21987775 21986986 ID=MsG0380012657.01.T01:cds;Parent=MsG0380012657.01.T01
Chr3 three_prime_UTR 21987776 21988839 21987776 ID=MsG0380012657.01.T01:three_prime_utr;Parent=MsG0380012657.01.T01
Gene Sequence

>MsG0380012657.01.T01

ATGCAAATGAGGAAACCTGATTTGATCATGGGAAAAGACAACAACAACATTAACAAGAGCAAGCTAAGGAAAGGGTTATGGTCACCTGAGGAAGATGAGAAGTTGGTGAGATACATGATAACTAAAGGACAAGGTTGTTGGAGTGACATTGCTAGGAATGCTGGTCTTCAAAGGTGTGGTAAAAGTTGCCGTCTTCGTTGGATTAATTACTTGAGACCTGATCTTAAGCGCGGCGCATTTTCGCCACAAGAGGAAGAACTCATCATTCATTTCCACTCCATTCTTGGCAACAGATGGTCCCAAATTGCAGCACGTCTACCTGGTCGTACCGACAATGAAATAAAGAATTTTTGGAATTCCACACTGAAGAAAAGATTGAAAACCAACAACAACAACTCTACTCCATCTCCAAACAACAGTGACACTTCGGATCAACCAATAGATAATGTTTTTGATGTGAAAAATAACATGATCATGCCAATTAATGAACAAGAACTAATGACATTATGCATGGATTCCTCATCATCAACTTCATCATCATCCATGCAATCCATGCACATGCATACCATGGTTTTACCTGACCAATTTGATCCATTTTCCTTGTTGTCTAACAACCGTTATGACATGACAAGTTTTCATGCTCATGACTTGCCAAATAGTTGTTTAACACAAGTTGGCAATATGGTTGATGATATTGGGCTTCATAGTGATGATCATTATGGGATTTTGGAGGCTAATAAAATGGGGTTATTAGAAAATGATTTTGAACTTCCTCCACTAGAAAGTAGAATTAGCATTGAAGATAAGAGTGCCCTAATTGGTGATTATAATGTGAAAAGCCATAACAACCACTTCAATAATAGTTGCTTCAATAACACTAATCACATTCAAAACTCCAATGAGGACTTGTTTGGGTTTGGAAGTCATGGGCAAGGAGAAAACTTAAGAATGGGAGAATGGGATTTGGAGGGTTTGATGCAAGACATATCCTATTTCCTCCTCTTGATTTCCAAGTTTAATTGTCTTTTCATTCTTTTGAATTTCCAATCACCCCTTGTCCCCTCTGATCTCTCTCTAAATTGA

Protein sequence

>MsG0380012657.01.T01

MQMRKPDLIMGKDNNNINKSKLRKGLWSPEEDEKLVRYMITKGQGCWSDIARNAGLQRCGKSCRLRWINYLRPDLKRGAFSPQEEELIIHFHSILGNRWSQIAARLPGRTDNEIKNFWNSTLKKRLKTNNNNSTPSPNNSDTSDQPIDNVFDVKNNMIMPINEQELMTLCMDSSSSTSSSSMQSMHMHTMVLPDQFDPFSLLSNNRYDMTSFHAHDLPNSCLTQVGNMVDDIGLHSDDHYGILEANKMGLLENDFELPPLESRISIEDKSALIGDYNVKSHNNHFNNSCFNNTNHIQNSNEDLFGFGSHGQGENLRMGEWDLEGLMQDISYFLLLISKFNCLFILLNFQSPLVPSDLSLN*