AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0380013032.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380013032.01.T01 MTR_5g020580 81.152 191 28 2 125 309 53 241 9.38e-103 307
MsG0380013032.01.T01 MTR_8g077195 63.351 191 62 2 125 309 51 239 1.06e-81 253
MsG0380013032.01.T01 MTR_8g077675 55.208 192 74 4 125 309 46 232 1.31e-66 214
MsG0380013032.01.T01 MTR_8g077620 57.812 192 68 4 125 309 50 235 1.96e-66 213
MsG0380013032.01.T01 MTR_1g022370 51.562 192 82 4 127 309 70 259 5.63e-57 189
MsG0380013032.01.T01 MTR_2g007930 49.741 193 84 6 127 309 54 243 4.00e-52 177
MsG0380013032.01.T01 MTR_1g098790 47.644 191 89 5 127 309 53 240 5.96e-50 171
MsG0380013032.01.T01 MTR_2g020280 47.619 189 91 2 127 309 39 225 1.14e-49 170
MsG0380013032.01.T01 MTR_8g077640 49.500 200 61 6 101 269 66 256 7.53e-46 159
MsG0380013032.01.T01 MTR_2g076200 44.444 189 96 3 123 304 37 223 4.86e-45 157
MsG0380013032.01.T01 MTR_1g088960 45.109 184 92 3 127 304 50 230 1.97e-43 154
MsG0380013032.01.T01 MTR_2g076210 41.304 184 95 3 127 303 37 214 2.85e-38 139
MsG0380013032.01.T01 MTR_8g077650 46.893 177 65 9 125 297 17 168 6.13e-35 129
MsG0380013032.01.T01 MTR_0210s0010 66.019 103 28 2 164 266 9 104 1.89e-34 121
MsG0380013032.01.T01 MTR_1g023800 49.558 113 51 1 121 227 46 158 5.43e-30 112
MsG0380013032.01.T01 MTR_2g020280 50.000 124 60 1 186 309 5 126 3.47e-29 113
MsG0380013032.01.T01 MTR_0479s0040 65.714 70 18 1 180 249 12 75 2.89e-20 83.6
MsG0380013032.01.T01 MTR_7g034070 43.810 105 45 3 21 124 32 123 1.59e-13 66.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380013032.01.T01 AT2G18280 53.968 189 76 3 127 309 48 231 4.36e-62 202
MsG0380013032.01.T01 AT2G18280 53.968 189 76 3 127 309 48 231 4.36e-62 202
MsG0380013032.01.T01 AT1G76900 48.454 194 86 5 127 309 57 247 3.41e-50 172
MsG0380013032.01.T01 AT1G76900 48.454 194 86 5 127 309 57 247 3.41e-50 172
MsG0380013032.01.T01 AT1G76900 48.454 194 86 5 127 309 57 247 3.41e-50 172
MsG0380013032.01.T01 AT1G25280 49.479 192 89 3 126 309 58 249 1.70e-49 171
MsG0380013032.01.T01 AT1G47270 48.333 180 76 4 127 299 44 213 2.37e-49 169
MsG0380013032.01.T01 AT1G47270 48.333 180 76 4 127 299 69 238 4.81e-49 169
MsG0380013032.01.T01 AT1G47270 48.333 180 76 4 127 299 68 237 5.46e-49 169
MsG0380013032.01.T01 AT2G47900 46.734 199 94 4 121 309 44 240 9.60e-48 165
MsG0380013032.01.T01 AT2G47900 46.970 198 94 4 121 309 44 239 1.90e-47 164
MsG0380013032.01.T01 AT2G47900 46.970 198 94 4 121 309 44 239 1.90e-47 164
MsG0380013032.01.T01 AT1G53320 44.974 189 96 2 127 309 44 230 5.72e-47 162
MsG0380013032.01.T01 AT1G43640 40.500 200 107 5 119 309 47 243 1.95e-44 157
MsG0380013032.01.T01 AT3G06380 45.789 190 90 5 127 309 33 216 3.58e-42 150
MsG0380013032.01.T01 AT5G18680 45.078 193 96 3 124 309 36 225 1.59e-40 145
MsG0380013032.01.T01 AT1G43640 41.667 180 93 5 139 309 1 177 1.01e-39 143
MsG0380013032.01.T01 AT5G18680 45.385 130 68 1 180 309 7 133 1.31e-24 101
MsG0380013032.01.T01 AT3G06380 45.238 126 63 3 184 309 5 124 3.65e-24 99.8
MsG0380013032.01.T01 AT1G61940 42.857 84 42 1 133 210 4 87 2.63e-17 80.5

Find 94 sgRNAs with CRISPR-Local

Find 267 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTCCTACTGGACCGGCTATT+TGG 0.181607 3:+29015830 None:intergenic
TCTGCGTATCTATTGTATTA+TGG 0.232029 3:-29016067 MsG0380013032.01.T01:CDS
CCAGTAGGAGATTTCTTTCT+AGG 0.241845 3:-29015817 MsG0380013032.01.T01:CDS
GCCGGTCCGGACGGCTATCC+AGG 0.256946 3:-29018740 MsG0380013032.01.T01:CDS
GACATGTGGCAGGTAGGATA+TGG 0.260930 3:-29018679 MsG0380013032.01.T01:CDS
ACTGCGTCGGGTCCATAGTC+TGG 0.291113 3:+29018972 None:intergenic
AAAACTCAGGTCTAACATTT+GGG 0.298970 3:-29015912 MsG0380013032.01.T01:CDS
TACTATTTCGTTAAATCAGC+TGG 0.313162 3:-29016140 MsG0380013032.01.T01:CDS
GAAAACTCAGGTCTAACATT+TGG 0.321965 3:-29015913 MsG0380013032.01.T01:CDS
TAGTCTGGGATGGACCTGTC+TGG 0.338695 3:+29018987 None:intergenic
TCATGCTGCTGAGGCTGCTC+AGG 0.339670 3:+29018806 None:intergenic
CGTCAACCTTCCACACTCTT+CGG 0.358220 3:+29016165 None:intergenic
GTCAACCTTCCACACTCTTC+GGG 0.361120 3:+29016166 None:intergenic
GACAGGTCCATCCCAGACTA+TGG 0.366447 3:-29018984 MsG0380013032.01.T01:CDS
TAGAAGAGACTGAGACTTCT+TGG 0.372030 3:-29016249 MsG0380013032.01.T01:CDS
TAGTTATATGCTTGAACTCT+TGG 0.377661 3:+29015785 None:intergenic
CACAGACTTAATCATATCTA+TGG 0.390953 3:-29015975 MsG0380013032.01.T01:CDS
TGCTGAGGCTCCTCAATAAC+AGG 0.399188 3:+29018839 None:intergenic
CGGCCCCTGAAAACGAGGCT+CGG 0.432814 3:+29018778 None:intergenic
CTCCGATACAATGCTTCATC+AGG 0.436765 3:-29016105 MsG0380013032.01.T01:CDS
AGAGATGGATATGATGTTGC+AGG 0.442976 3:-29019020 None:intergenic
GTGCTCCTGTGTGTGAATCA+TGG 0.450066 3:-29016219 MsG0380013032.01.T01:CDS
CCGAGGGTGGTGTACGAGGC+CGG 0.452150 3:-29018758 MsG0380013032.01.T01:CDS
AGGCAACCTCCACATGGATC+TGG 0.456221 3:-29015860 MsG0380013032.01.T01:CDS
CCAGTACCAGTTTGTTATTG+AGG 0.457595 3:-29018882 MsG0380013032.01.T01:CDS
ATATGAGCAATTCAGCTCAT+AGG 0.461752 3:+29015746 None:intergenic
GGCCCCTGAAAACGAGGCTC+GGG 0.464904 3:+29018779 None:intergenic
ACCAATTTAGCAGGGACAAT+GGG 0.465957 3:-29016314 MsG0380013032.01.T01:intron
TCGGGCTGCTCATGCTGCTG+AGG 0.466864 3:+29018797 None:intergenic
TAGGAGATTTCTTTCTAGGC+AGG 0.469861 3:-29015813 MsG0380013032.01.T01:CDS
CAGGCTCCTCAATAACAAAC+TGG 0.478197 3:+29018876 None:intergenic
GCCACATGTCCACCAAAGTT+AGG 0.483064 3:+29018692 None:intergenic
CCTCAATAACAAACTGGTAC+TGG 0.488420 3:+29018882 None:intergenic
CGTTCCAGCAATGCGTATGT+TGG 0.488866 3:-29015935 MsG0380013032.01.T01:CDS
GGTGGTGTACGAGGCCGGTC+CGG 0.498124 3:-29018753 MsG0380013032.01.T01:CDS
TAATGCTGCTGATACTGCGT+CGG 0.500390 3:+29018959 None:intergenic
CCGGTCCGGACGGCTATCCA+GGG 0.507102 3:-29018739 MsG0380013032.01.T01:CDS
CCTAGAAAGAAATCTCCTAC+TGG 0.516235 3:+29015817 None:intergenic
TCACTATATACGACATTGAC+AGG 0.521151 3:-29015880 MsG0380013032.01.T01:CDS
CCCTGGATAGCCGTCCGGAC+CGG 0.523818 3:+29018739 None:intergenic
AACTGGTACTGGTGAGGCTG+AGG 0.525956 3:+29018893 None:intergenic
CTGCGTCGGGTCCATAGTCT+GGG 0.526109 3:+29018973 None:intergenic
ACATGTGGCAGGTAGGATAT+GGG 0.528836 3:-29018678 MsG0380013032.01.T01:CDS
GTGTACGAGGCCGGTCCGGA+CGG 0.533709 3:-29018749 MsG0380013032.01.T01:CDS
AATGCTGCTGATACTGCGTC+GGG 0.536471 3:+29018960 None:intergenic
TGAGGAGCCGCCTGTTATTG+AGG 0.538470 3:-29018849 MsG0380013032.01.T01:CDS
TATTGAGGAGCCTGCTGTTG+AGG 0.543618 3:-29018867 MsG0380013032.01.T01:CDS
ACTATTTCGTTAAATCAGCT+GGG 0.545092 3:-29016139 MsG0380013032.01.T01:CDS
GTATTATGGACTGGTGCCAT+TGG 0.546205 3:-29016053 MsG0380013032.01.T01:CDS
CCGGCCTCGTACACCACCCT+CGG 0.547296 3:+29018758 None:intergenic
AAAGAAATCTCCTACTGGAC+CGG 0.552476 3:+29015822 None:intergenic
AACTTTGGTGGACATGTGGC+AGG 0.554767 3:-29018689 MsG0380013032.01.T01:CDS
TGCTACTTGATATAATTCGA+AGG 0.558581 3:-29016273 MsG0380013032.01.T01:CDS
CGGTCCGGACGGCTATCCAG+GGG 0.561510 3:-29018738 MsG0380013032.01.T01:CDS
GGTAAAAGCGAGAGTTCAGA+AGG 0.563163 3:+29018713 None:intergenic
AGTCTGGGATGGACCTGTCT+GGG 0.565115 3:+29018988 None:intergenic
AACCAATTTAGCAGGGACAA+TGG 0.568016 3:-29016315 MsG0380013032.01.T01:intron
AGATATGATTAAGTCTGTGC+CGG 0.568041 3:+29015979 None:intergenic
ACCCTCGGCCCCTGAAAACG+AGG 0.568826 3:+29018773 None:intergenic
CGATACAATGCTTCATCAGG+AGG 0.568935 3:-29016102 MsG0380013032.01.T01:CDS
GTATCTATTGTATTATGGAC+TGG 0.570769 3:-29016062 MsG0380013032.01.T01:CDS
GGGGCCGAGGGTGGTGTACG+AGG 0.573385 3:-29018762 MsG0380013032.01.T01:CDS
AATGTCGTATATAGTGAACT+TGG 0.574240 3:+29015886 None:intergenic
GCTACTTGATATAATTCGAA+GGG 0.575810 3:-29016272 MsG0380013032.01.T01:CDS
CTGGAATTCAACCAAATAGC+CGG 0.579251 3:-29015841 MsG0380013032.01.T01:CDS
ACCTAACTTTGGTGGACATG+TGG 0.584257 3:-29018693 MsG0380013032.01.T01:CDS
ACAGGCGGCTCCTCAACAGC+AGG 0.585203 3:+29018857 None:intergenic
CAGGGGTCAACATCCCAGAC+AGG 0.589676 3:-29019001 MsG0380013032.01.T01:CDS
CTCCTGATGAAGCATTGTAT+CGG 0.592254 3:+29016103 None:intergenic
CTGAACAATCTCTTGTGTAA+CGG 0.594307 3:+29016192 None:intergenic
ATGCGTATGTTGGAAAACTC+AGG 0.599772 3:-29015925 MsG0380013032.01.T01:CDS
AGCAATTCAGCTCATAGGAA+TGG 0.600877 3:+29015751 None:intergenic
GAGATGGATATGATGTTGCA+GGG 0.607976 3:-29019019 MsG0380013032.01.T01:CDS
AGACTCCCGAAGAGTGTGGA+AGG 0.609764 3:-29016171 MsG0380013032.01.T01:CDS
GTCGGGTCCATAGTCTGGGA+TGG 0.609939 3:+29018977 None:intergenic
TCAGGCTCATCATTCTGCTG+AGG 0.612535 3:+29018824 None:intergenic
TCACACACAGGAGCACAAGA+AGG 0.618611 3:+29016226 None:intergenic
TCCTGTGTGTGAATCATGGA+GGG 0.620710 3:-29016215 MsG0380013032.01.T01:CDS
CATTGTATCGGAGAATCACA+AGG 0.642254 3:+29016115 None:intergenic
GTTCAGACTCCCGAAGAGTG+TGG 0.642949 3:-29016175 MsG0380013032.01.T01:CDS
TTGGTGGACATGTGGCAGGT+AGG 0.643002 3:-29018685 MsG0380013032.01.T01:CDS
GCCCTCCATGATTCACACAC+AGG 0.647670 3:+29016214 None:intergenic
CTCCTGTGTGTGAATCATGG+AGG 0.651561 3:-29016216 MsG0380013032.01.T01:CDS
ATTGACAGGCAACCTCCACA+TGG 0.655106 3:-29015866 MsG0380013032.01.T01:CDS
AACCAAATAGCCGGTCCAGT+AGG 0.657951 3:-29015832 MsG0380013032.01.T01:CDS
ATAACAAACTGGTACTGGTG+AGG 0.663813 3:+29018887 None:intergenic
GATACAATGCTTCATCAGGA+GGG 0.667883 3:-29016101 MsG0380013032.01.T01:CDS
TGAAACTGATACGCATCATG+CGG 0.671811 3:+29018920 None:intergenic
AAACTCAGGTCTAACATTTG+GGG 0.674975 3:-29015911 MsG0380013032.01.T01:CDS
AGATGGATATGATGTTGCAG+GGG 0.682485 3:-29019018 MsG0380013032.01.T01:CDS
GGTCCGGACGGCTATCCAGG+GGG 0.685632 3:-29018737 MsG0380013032.01.T01:CDS
TGAATTCCAGATCCATGTGG+AGG 0.693280 3:+29015854 None:intergenic
GGTTGAATTCCAGATCCATG+TGG 0.703182 3:+29015851 None:intergenic
TGAGGCTCCTCAATAACAGG+CGG 0.736065 3:+29018842 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AACATTAATTATACTTACAT+CGG + Chr3:29016127-29016146 None:intergenic 15.0%
!! AATTATCTATATTTGATAGA+AGG + Chr3:29017699-29017718 None:intergenic 15.0%
!! ATCTTATAATAAATCTTTGA+GGG + Chr3:29017023-29017042 None:intergenic 15.0%
!! TGTTAATTCTAACATTAAAT+AGG + Chr3:29016268-29016287 None:intergenic 15.0%
!! ACTATTAACCTTTATTGAAA+TGG + Chr3:29016987-29017006 None:intergenic 20.0%
!! CAATAGCTATCAATTATTAT+AGG - Chr3:29018103-29018122 MsG0380013032.01.T01:intron 20.0%
!! GAATGTAGATACAAAATAAT+TGG + Chr3:29017362-29017381 None:intergenic 20.0%
!! GATCTTATAATAAATCTTTG+AGG + Chr3:29017024-29017043 None:intergenic 20.0%
!! TAGTTATCAGGTAATATATA+AGG - Chr3:29018069-29018088 MsG0380013032.01.T01:intron 20.0%
!! TAGTTTATTCCCTTAATTAT+TGG + Chr3:29017097-29017116 None:intergenic 20.0%
!! TATGATCCAAAATATCATAT+GGG - Chr3:29017055-29017074 MsG0380013032.01.T01:intron 20.0%
!! TCTCTTAACCTTATATAAAA+GGG - Chr3:29017128-29017147 MsG0380013032.01.T01:intron 20.0%
!! TTATATATTACCTGATAACT+AGG + Chr3:29018070-29018089 None:intergenic 20.0%
!! TTATGATCCAAAATATCATA+TGG - Chr3:29017054-29017073 MsG0380013032.01.T01:intron 20.0%
!! TTCTCTTAACCTTATATAAA+AGG - Chr3:29017127-29017146 MsG0380013032.01.T01:intron 20.0%
! ATCAATAGTGAAGTAATGTA+AGG + Chr3:29017423-29017442 None:intergenic 25.0%
! CAAAATGGATAGTAAAATTG+AGG - Chr3:29017541-29017560 MsG0380013032.01.T01:intron 25.0%
! CTCTTAACCTTATATAAAAG+GGG - Chr3:29017129-29017148 MsG0380013032.01.T01:intron 25.0%
! GTGAGAGTGATATATATATA+AGG - Chr3:29017580-29017599 MsG0380013032.01.T01:intron 25.0%
! TAATTATGAGGTGATATGTA+AGG - Chr3:29018023-29018042 MsG0380013032.01.T01:intron 25.0%
! TCACTTGATCCAATAATTAA+GGG - Chr3:29017085-29017104 MsG0380013032.01.T01:intron 25.0%
! TGCAGTATTTACAATTATCA+TGG + Chr3:29017885-29017904 None:intergenic 25.0%
!!! TTTGGTTCTTCTTGTTTTTA+TGG - Chr3:29018229-29018248 MsG0380013032.01.T01:intron 25.0%
AAAACTCAGGTCTAACATTT+GGG - Chr3:29018861-29018880 MsG0380013032.01.T01:CDS 30.0%
AATGTCGTATATAGTGAACT+TGG + Chr3:29018890-29018909 None:intergenic 30.0%
ACTATTTCGTTAAATCAGCT+GGG - Chr3:29018634-29018653 MsG0380013032.01.T01:intron 30.0%
CACAGACTTAATCATATCTA+TGG - Chr3:29018798-29018817 MsG0380013032.01.T01:CDS 30.0%
GAAGCTGAGCATTAAAAATT+TGG - Chr3:29016414-29016433 MsG0380013032.01.T01:intron 30.0%
GATGTTTCTTCTTTGCAAAA+TGG - Chr3:29017526-29017545 MsG0380013032.01.T01:intron 30.0%
GCATTGAATAAGAAGAGAAA+AGG - Chr3:29017902-29017921 MsG0380013032.01.T01:intron 30.0%
GCTACTTGATATAATTCGAA+GGG - Chr3:29018501-29018520 MsG0380013032.01.T01:intron 30.0%
GCTTCATTATCAAGTTATTG+AGG - Chr3:29018265-29018284 MsG0380013032.01.T01:intron 30.0%
GTATCTATTGTATTATGGAC+TGG - Chr3:29018711-29018730 MsG0380013032.01.T01:CDS 30.0%
GTCACTTGATCCAATAATTA+AGG - Chr3:29017084-29017103 MsG0380013032.01.T01:intron 30.0%
TACTATTTCGTTAAATCAGC+TGG - Chr3:29018633-29018652 MsG0380013032.01.T01:intron 30.0%
TAGTTATATGCTTGAACTCT+TGG + Chr3:29018991-29019010 None:intergenic 30.0%
TATGAAGCTATTCTCTATCA+TGG + Chr3:29017755-29017774 None:intergenic 30.0%
TATTAGCTGCCAAAAAGATA+AGG - Chr3:29018764-29018783 MsG0380013032.01.T01:CDS 30.0%
TCAGTTTCGAAGAAAACATA+GGG - Chr3:29016369-29016388 MsG0380013032.01.T01:intron 30.0%
TCATTATCAAGTTATTGAGG+TGG - Chr3:29018268-29018287 MsG0380013032.01.T01:intron 30.0%
TCATTGTTATGTTTAAGCGA+TGG - Chr3:29017479-29017498 MsG0380013032.01.T01:intron 30.0%
TCATTTCTGTAAAACTGATG+AGG - Chr3:29017939-29017958 MsG0380013032.01.T01:intron 30.0%
TCTGCGTATCTATTGTATTA+TGG - Chr3:29018706-29018725 MsG0380013032.01.T01:CDS 30.0%
TGCAACATTACATAACATTG+AGG + Chr3:29017630-29017649 None:intergenic 30.0%
TGTAAGAGCAACTAATTATG+AGG - Chr3:29018011-29018030 MsG0380013032.01.T01:intron 30.0%
TTATTTGCTTGAACATACGT+GGG + Chr3:29017452-29017471 None:intergenic 30.0%
TTCAGTTTCGAAGAAAACAT+AGG - Chr3:29016368-29016387 MsG0380013032.01.T01:intron 30.0%
TTTATTTGCTTGAACATACG+TGG + Chr3:29017453-29017472 None:intergenic 30.0%
! ACATGTCCCATATGATATTT+TGG + Chr3:29017064-29017083 None:intergenic 30.0%
! TAAGGTGTTATCTCTTGTAA+GGG + Chr3:29017405-29017424 None:intergenic 30.0%
! TCATAAGCACTGTAAACAAT+AGG + Chr3:29016721-29016740 None:intergenic 30.0%
! TGCTACTTGATATAATTCGA+AGG - Chr3:29018500-29018519 MsG0380013032.01.T01:intron 30.0%
! TTATCAGTCTCATTTTCCAA+TGG + Chr3:29018739-29018758 None:intergenic 30.0%
!! GATGTGAAATCCATTTTTCA+CGG - Chr3:29017801-29017820 MsG0380013032.01.T01:intron 30.0%
!!! AGAGGTTTTTAAAGCAGTTA+AGG + Chr3:29018183-29018202 None:intergenic 30.0%
!!! TCTTCTTGTTTTTATGGATC+TGG - Chr3:29018235-29018254 MsG0380013032.01.T01:intron 30.0%
AAAAAGATAAGGAAGACAGC+CGG - Chr3:29018775-29018794 MsG0380013032.01.T01:CDS 35.0%
AAACTCAGGTCTAACATTTG+GGG - Chr3:29018862-29018881 MsG0380013032.01.T01:CDS 35.0%
AAATTTGGCATTGCCTATTC+CGG - Chr3:29016429-29016448 MsG0380013032.01.T01:intron 35.0%
ACCTTTATTGAAATGGCTTG+TGG + Chr3:29016980-29016999 None:intergenic 35.0%
AGATATGATTAAGTCTGTGC+CGG + Chr3:29018797-29018816 None:intergenic 35.0%
ATAGAAGGCTCTTCATGTTA+TGG + Chr3:29017684-29017703 None:intergenic 35.0%
ATATAAAAGGGGACCAATGA+TGG - Chr3:29017140-29017159 MsG0380013032.01.T01:intron 35.0%
ATCACTTGAACCAATTTAGC+AGG - Chr3:29018450-29018469 MsG0380013032.01.T01:intron 35.0%
CATTAGCTATCCTAGTTATC+AGG - Chr3:29018057-29018076 MsG0380013032.01.T01:intron 35.0%
CTACATTCATCCATTCCAAA+GGG - Chr3:29017374-29017393 MsG0380013032.01.T01:intron 35.0%
CTCTAGTAGAGTAATGACTT+AGG - Chr3:29017218-29017237 MsG0380013032.01.T01:intron 35.0%
CTGAACAATCTCTTGTGTAA+CGG + Chr3:29018584-29018603 None:intergenic 35.0%
GAAAACTCAGGTCTAACATT+TGG - Chr3:29018860-29018879 MsG0380013032.01.T01:CDS 35.0%
GCAAAATTCTAACAGTTGAG+CGG - Chr3:29016896-29016915 MsG0380013032.01.T01:intron 35.0%
TAAAGCAGTTAAGGAGATGA+AGG + Chr3:29018174-29018193 None:intergenic 35.0%
TAGCTTCATATTGATGTACC+AGG - Chr3:29017765-29017784 MsG0380013032.01.T01:intron 35.0%
TATAAAAGGGGACCAATGAT+GGG - Chr3:29017141-29017160 MsG0380013032.01.T01:intron 35.0%
TATTTGCTTGAACATACGTG+GGG + Chr3:29017451-29017470 None:intergenic 35.0%
TCACTATATACGACATTGAC+AGG - Chr3:29018893-29018912 MsG0380013032.01.T01:CDS 35.0%
TCACTTGAACCAATTTAGCA+GGG - Chr3:29018451-29018470 MsG0380013032.01.T01:intron 35.0%
TCTACATTCATCCATTCCAA+AGG - Chr3:29017373-29017392 MsG0380013032.01.T01:intron 35.0%
TGGAATGAAGTGAATATGTC+CGG - Chr3:29016471-29016490 MsG0380013032.01.T01:intron 35.0%
TGTTATCTCTTGTAAGGGTT+TGG + Chr3:29017400-29017419 None:intergenic 35.0%
TTGTCCAATGGATCTTAAAG+AGG - Chr3:29017851-29017870 MsG0380013032.01.T01:intron 35.0%
! AATGGATTTCACATCCGTAA+TGG + Chr3:29017796-29017815 None:intergenic 35.0%
! CATTGGTCCCCTTTTATATA+AGG + Chr3:29017139-29017158 None:intergenic 35.0%
! CCTTTATTGAAATGGCTTGT+GGG + Chr3:29016979-29016998 None:intergenic 35.0%
! GTAAGGTGTTATCTCTTGTA+AGG + Chr3:29017406-29017425 None:intergenic 35.0%
! TGTTGTTGAGAAGCATAGTA+CGG - Chr3:29018317-29018336 MsG0380013032.01.T01:intron 35.0%
AAAGAAATCTCCTACTGGAC+CGG + Chr3:29018954-29018973 None:intergenic 40.0%
AACATGCGCAAGGGTAAATA+TGG - Chr3:29016834-29016853 MsG0380013032.01.T01:intron 40.0%
AACCAATTTAGCAGGGACAA+TGG - Chr3:29018458-29018477 MsG0380013032.01.T01:intron 40.0%
AAGGCTCTTCATGTTATGGT+TGG + Chr3:29017680-29017699 None:intergenic 40.0%
AATCTCTCTCTCTCTTCCTT+TGG - Chr3:29017191-29017210 MsG0380013032.01.T01:intron 40.0%
AATTTGGCATTGCCTATTCC+GGG - Chr3:29016430-29016449 MsG0380013032.01.T01:intron 40.0%
ACCAATTTAGCAGGGACAAT+GGG - Chr3:29018459-29018478 MsG0380013032.01.T01:intron 40.0%
AGGTAATAACGAACCCTCTT+TGG - Chr3:29018123-29018142 MsG0380013032.01.T01:intron 40.0%
ATGCGTATGTTGGAAAACTC+AGG - Chr3:29018848-29018867 MsG0380013032.01.T01:CDS 40.0%
ATTCTGGCAAAAACCCAAAG+AGG + Chr3:29018140-29018159 None:intergenic 40.0%
ATTTCACATCCGTAATGGTG+TGG + Chr3:29017791-29017810 None:intergenic 40.0%
CATTGTATCGGAGAATCACA+AGG + Chr3:29018661-29018680 None:intergenic 40.0%
CCAGTAGGAGATTTCTTTCT+AGG - Chr3:29018956-29018975 MsG0380013032.01.T01:CDS 40.0%
CCCACAAGCCATTTCAATAA+AGG - Chr3:29016976-29016995 MsG0380013032.01.T01:intron 40.0%
CCTAGAAAGAAATCTCCTAC+TGG + Chr3:29018959-29018978 None:intergenic 40.0%
CCTCAATAACAAACTGGTAC+TGG + Chr3:29015894-29015913 None:intergenic 40.0%
CGAAGAAAACATAGGGTGAA+AGG - Chr3:29016376-29016395 MsG0380013032.01.T01:intron 40.0%
CTGGAATTCAACCAAATAGC+CGG - Chr3:29018932-29018951 MsG0380013032.01.T01:CDS 40.0%
GAACCAAATCGAAGAAACAG+AGG + Chr3:29018217-29018236 None:intergenic 40.0%
GATACAATGCTTCATCAGGA+GGG - Chr3:29018672-29018691 MsG0380013032.01.T01:CDS 40.0%
GGATTGGGTGATATTAGAAC+TGG - Chr3:29016931-29016950 MsG0380013032.01.T01:intron 40.0%
GGGTATGAGAACATATCTCA+CGG - Chr3:29016516-29016535 MsG0380013032.01.T01:intron 40.0%
GGTAATAACGAACCCTCTTT+GGG - Chr3:29018124-29018143 MsG0380013032.01.T01:intron 40.0%
GGTATGAGAACATATCTCAC+GGG - Chr3:29016517-29016536 MsG0380013032.01.T01:intron 40.0%
GTAAATATGGAACAGCTGCA+GGG - Chr3:29016847-29016866 MsG0380013032.01.T01:intron 40.0%
TAGAAGAGACTGAGACTTCT+TGG - Chr3:29018524-29018543 MsG0380013032.01.T01:intron 40.0%
TAGGAGATTTCTTTCTAGGC+AGG - Chr3:29018960-29018979 MsG0380013032.01.T01:CDS 40.0%
TGAAACTGATACGCATCATG+CGG + Chr3:29015856-29015875 None:intergenic 40.0%
TTCTGGCAAAAACCCAAAGA+GGG + Chr3:29018139-29018158 None:intergenic 40.0%
! AAACCACACATTTTGTTCCC+CGG + Chr3:29016451-29016470 None:intergenic 40.0%
! GGCTGTCTTCCTTATCTTTT+TGG + Chr3:29018776-29018795 None:intergenic 40.0%
! GGGAACAAAATGTGTGGTTT+TGG - Chr3:29016451-29016470 MsG0380013032.01.T01:intron 40.0%
! TTTTCCAACATACGCATTGC+TGG + Chr3:29018845-29018864 None:intergenic 40.0%
!! ACTCTACTAGAGAGTACCAA+AGG + Chr3:29017210-29017229 None:intergenic 40.0%
!! AGAGCCTCTTTAAGATCCAT+TGG + Chr3:29017858-29017877 None:intergenic 40.0%
!! ATAACAAACTGGTACTGGTG+AGG + Chr3:29015889-29015908 None:intergenic 40.0%
!! CCAGTACCAGTTTGTTATTG+AGG - Chr3:29015891-29015910 MsG0380013032.01.T01:CDS 40.0%
!! CTCCTGATGAAGCATTGTAT+CGG + Chr3:29018673-29018692 None:intergenic 40.0%
!! CTCTCGCTTTTACCTAACTT+TGG - Chr3:29016069-29016088 MsG0380013032.01.T01:CDS 40.0%
!! GTGAAATCCATTTTTCACGG+CGG - Chr3:29017804-29017823 MsG0380013032.01.T01:intron 40.0%
!! TCGCTTTTACCTAACTTTGG+TGG - Chr3:29016072-29016091 MsG0380013032.01.T01:CDS 40.0%
AACTCAAGGAGATGAGGGAT+GGG - Chr3:29018340-29018359 MsG0380013032.01.T01:intron 45.0%
ACAGAGGCAGTAAAACACAG+AGG + Chr3:29018201-29018220 None:intergenic 45.0%
ACATGTGGCAGGTAGGATAT+GGG - Chr3:29016095-29016114 MsG0380013032.01.T01:CDS 45.0%
ACCCATTGTCCCTGCTAAAT+TGG + Chr3:29018463-29018482 None:intergenic 45.0%
AGCAGTTAAGGAGATGAAGG+AGG + Chr3:29018171-29018190 None:intergenic 45.0%
ATGCCTTTGCTTCCCATCAT+TGG + Chr3:29017156-29017175 None:intergenic 45.0%
ATTCCGGGGAACAAAATGTG+TGG - Chr3:29016445-29016464 MsG0380013032.01.T01:intron 45.0%
ATTTGGCATTGCCTATTCCG+GGG - Chr3:29016431-29016450 MsG0380013032.01.T01:intron 45.0%
CAGGCTCCTCAATAACAAAC+TGG + Chr3:29015900-29015919 None:intergenic 45.0%
CCAATTACCGCCGTGAAAAA+TGG + Chr3:29017814-29017833 None:intergenic 45.0%
CGATACAATGCTTCATCAGG+AGG - Chr3:29018671-29018690 MsG0380013032.01.T01:CDS 45.0%
CTCCGATACAATGCTTCATC+AGG - Chr3:29018668-29018687 MsG0380013032.01.T01:CDS 45.0%
GAAGCATAGTACGGAACTCA+AGG - Chr3:29018326-29018345 MsG0380013032.01.T01:intron 45.0%
GACCATCACACTAGATGATG+TGG - Chr3:29016607-29016626 MsG0380013032.01.T01:intron 45.0%
GCGTTAGTTAACATGCGCAA+GGG - Chr3:29016825-29016844 MsG0380013032.01.T01:intron 45.0%
GGGTTAACTCTCTATCAGGA+AGG + Chr3:29016667-29016686 None:intergenic 45.0%
GGTAAAAGCGAGAGTTCAGA+AGG + Chr3:29016063-29016082 None:intergenic 45.0%
GGTAAATATGGAACAGCTGC+AGG - Chr3:29016846-29016865 MsG0380013032.01.T01:intron 45.0%
GGTTGAATTCCAGATCCATG+TGG + Chr3:29018925-29018944 None:intergenic 45.0%
TAATGCTGCTGATACTGCGT+CGG + Chr3:29015817-29015836 None:intergenic 45.0%
TACGGAACTCAAGGAGATGA+GGG - Chr3:29018335-29018354 MsG0380013032.01.T01:intron 45.0%
TCCTGTGTGTGAATCATGGA+GGG - Chr3:29018558-29018577 MsG0380013032.01.T01:intron 45.0%
TGAATTCCAGATCCATGTGG+AGG + Chr3:29018922-29018941 None:intergenic 45.0%
TGATAGAGAGTTAACCCGTG+AGG - Chr3:29016670-29016689 MsG0380013032.01.T01:intron 45.0%
TGCGTTAGTTAACATGCGCA+AGG - Chr3:29016824-29016843 MsG0380013032.01.T01:intron 45.0%
TGTTCTCATACCCACTTGTC+AGG + Chr3:29016509-29016528 None:intergenic 45.0%
! ACCTAACTTTGGTGGACATG+TGG - Chr3:29016080-29016099 MsG0380013032.01.T01:CDS 45.0%
! ATGGGATTGGTAATACGTCG+AGG - Chr3:29018358-29018377 MsG0380013032.01.T01:intron 45.0%
! ATTGGTAATACGTCGAGGAG+AGG - Chr3:29018363-29018382 MsG0380013032.01.T01:intron 45.0%
! CACATTTTGTTCCCCGGAAT+AGG + Chr3:29016445-29016464 None:intergenic 45.0%
! CTGCCTCTGTTTCTTCGATT+TGG - Chr3:29018211-29018230 MsG0380013032.01.T01:intron 45.0%
! TCACGGGTTAACTCTCTATC+AGG + Chr3:29016671-29016690 None:intergenic 45.0%
!! CCATTTTTCACGGCGGTAAT+TGG - Chr3:29017811-29017830 MsG0380013032.01.T01:intron 45.0%
!! GTATTATGGACTGGTGCCAT+TGG - Chr3:29018720-29018739 MsG0380013032.01.T01:CDS 45.0%
AACCAAATAGCCGGTCCAGT+AGG - Chr3:29018941-29018960 MsG0380013032.01.T01:CDS 50.0%
AAGGAGATGAGGGATGGGAT+TGG - Chr3:29018345-29018364 MsG0380013032.01.T01:intron 50.0%
AATATGGAACAGCTGCAGGG+TGG - Chr3:29016850-29016869 MsG0380013032.01.T01:intron 50.0%
AATGCTCAGCTTCTTCCCGT+GGG + Chr3:29016407-29016426 None:intergenic 50.0%
AATGCTGCTGATACTGCGTC+GGG + Chr3:29015816-29015835 None:intergenic 50.0%
AGAGAGTTAACCCGTGAGGA+GGG - Chr3:29016674-29016693 MsG0380013032.01.T01:intron 50.0%
AGGGTGGGATCAAAATGTGC+TGG - Chr3:29016866-29016885 MsG0380013032.01.T01:intron 50.0%
ATATGGAACAGCTGCAGGGT+GGG - Chr3:29016851-29016870 MsG0380013032.01.T01:intron 50.0%
ATTGACAGGCAACCTCCACA+TGG - Chr3:29018907-29018926 MsG0380013032.01.T01:CDS 50.0%
CAACAGGTAGATGAAGCTGC+TGG + Chr3:29016580-29016599 None:intergenic 50.0%
CAGCAGCTTCATCTACCTGT+TGG - Chr3:29016578-29016597 MsG0380013032.01.T01:intron 50.0%
CGCCACATCATCTAGTGTGA+TGG + Chr3:29016612-29016631 None:intergenic 50.0%
CGTCAACCTTCCACACTCTT+CGG + Chr3:29018611-29018630 None:intergenic 50.0%
CGTTCCAGCAATGCGTATGT+TGG - Chr3:29018838-29018857 MsG0380013032.01.T01:CDS 50.0%
CTCATACCCACTTGTCAGGA+GGG + Chr3:29016505-29016524 None:intergenic 50.0%
CTCCTGTGTGTGAATCATGG+AGG - Chr3:29018557-29018576 MsG0380013032.01.T01:intron 50.0%
CTTGTAAGGGTTTGGCCCTT+TGG + Chr3:29017392-29017411 None:intergenic 50.0%
GAACTCAAGGAGATGAGGGA+TGG - Chr3:29018339-29018358 MsG0380013032.01.T01:intron 50.0%
GACATGTGGCAGGTAGGATA+TGG - Chr3:29016094-29016113 MsG0380013032.01.T01:CDS 50.0%
GATGACAGAGAGATGGCATG+AGG - Chr3:29016551-29016570 MsG0380013032.01.T01:intron 50.0%
GCCACATGTCCACCAAAGTT+AGG + Chr3:29016084-29016103 None:intergenic 50.0%
GCTGATAGCAGGTTGTCCAA+TGG - Chr3:29017839-29017858 MsG0380013032.01.T01:intron 50.0%
GGCTTGTGGGATCTCTTCAA+TGG + Chr3:29016966-29016985 None:intergenic 50.0%
GGGTGGGATCAAAATGTGCT+GGG - Chr3:29016867-29016886 MsG0380013032.01.T01:intron 50.0%
GTACGGAACTCAAGGAGATG+AGG - Chr3:29018334-29018353 MsG0380013032.01.T01:intron 50.0%
GTCAACCTTCCACACTCTTC+GGG + Chr3:29018610-29018629 None:intergenic 50.0%
GTGATATTAGAACTGGCGCG+AGG - Chr3:29016938-29016957 MsG0380013032.01.T01:intron 50.0%
GTGATGGTCATCTCTCCAAC+AGG + Chr3:29016596-29016615 None:intergenic 50.0%
GTGCTCCTGTGTGTGAATCA+TGG - Chr3:29018554-29018573 MsG0380013032.01.T01:intron 50.0%
TAATACGTCGAGGAGAGGTG+TGG - Chr3:29018368-29018387 MsG0380013032.01.T01:intron 50.0%
TAATGCTCAGCTTCTTCCCG+TGG + Chr3:29016408-29016427 None:intergenic 50.0%
TAGAGAGTTAACCCGTGAGG+AGG - Chr3:29016673-29016692 MsG0380013032.01.T01:intron 50.0%
TATTGAGGAGCCTGCTGTTG+AGG - Chr3:29015906-29015925 MsG0380013032.01.T01:CDS 50.0%
TCAGGCTCATCATTCTGCTG+AGG + Chr3:29015952-29015971 None:intergenic 50.0%
TCATACCCACTTGTCAGGAG+GGG + Chr3:29016504-29016523 None:intergenic 50.0%
TCATCTCTAACCCCTCCTCA+CGG + Chr3:29016688-29016707 None:intergenic 50.0%
TCCTAGGCATTCCCATCACT+GGG - Chr3:29016636-29016655 MsG0380013032.01.T01:intron 50.0%
TCTCATACCCACTTGTCAGG+AGG + Chr3:29016506-29016525 None:intergenic 50.0%
TCTGTGCGATGACAGAGAGA+TGG - Chr3:29016544-29016563 MsG0380013032.01.T01:intron 50.0%
TGAGGCTCCTCAATAACAGG+CGG + Chr3:29015934-29015953 None:intergenic 50.0%
TGCTGAGGCTCCTCAATAAC+AGG + Chr3:29015937-29015956 None:intergenic 50.0%
TGGGATCAAAATGTGCTGGG+TGG - Chr3:29016870-29016889 MsG0380013032.01.T01:intron 50.0%
TGTACCAGGCCACACCATTA+CGG - Chr3:29017779-29017798 MsG0380013032.01.T01:intron 50.0%
TTCACGGCGGTAATTGGTAG+CGG - Chr3:29017817-29017836 MsG0380013032.01.T01:intron 50.0%
! AACTTTGGTGGACATGTGGC+AGG - Chr3:29016084-29016103 MsG0380013032.01.T01:CDS 50.0%
! AAGGGTTTGGCCCTTTGGAA+TGG + Chr3:29017387-29017406 None:intergenic 50.0%
! AATACGTCGAGGAGAGGTGT+GGG - Chr3:29018369-29018388 MsG0380013032.01.T01:intron 50.0%
! GGACCAATGATGGGAAGCAA+AGG - Chr3:29017150-29017169 MsG0380013032.01.T01:intron 50.0%
! TCACACACAGGAGCACAAGA+AGG + Chr3:29018550-29018569 None:intergenic 50.0%
!! AATTGGTAGCGGCTGATAGC+AGG - Chr3:29017828-29017847 MsG0380013032.01.T01:intron 50.0%
!! AGGGTGAAAGGTATCTCCCA+CGG - Chr3:29016388-29016407 MsG0380013032.01.T01:intron 50.0%
!! GAAGGAGGCGTTGAGAATTC+TGG + Chr3:29018156-29018175 None:intergenic 50.0%
ACATCCGTAATGGTGTGGCC+TGG + Chr3:29017786-29017805 None:intergenic 55.0%
AGGAAGGAGTCTCCCAGTGA+TGG + Chr3:29016651-29016670 None:intergenic 55.0%
AGGCAACCTCCACATGGATC+TGG - Chr3:29018913-29018932 MsG0380013032.01.T01:CDS 55.0%
CATCTCTAACCCCTCCTCAC+GGG + Chr3:29016687-29016706 None:intergenic 55.0%
CTCCTACTGGACCGGCTATT+TGG + Chr3:29018946-29018965 None:intergenic 55.0%
CTCCTAGGCATTCCCATCAC+TGG - Chr3:29016635-29016654 MsG0380013032.01.T01:intron 55.0%
GACAGGTCCATCCCAGACTA+TGG - Chr3:29015789-29015808 MsG0380013032.01.T01:CDS 55.0%
GAGAGTTAACCCGTGAGGAG+GGG - Chr3:29016675-29016694 MsG0380013032.01.T01:intron 55.0%
GATGATGTGGCGTGTCTCCT+AGG - Chr3:29016620-29016639 MsG0380013032.01.T01:intron 55.0%
GCCCTCCATGATTCACACAC+AGG + Chr3:29018562-29018581 None:intergenic 55.0%
GGAAGGAGTCTCCCAGTGAT+GGG + Chr3:29016650-29016669 None:intergenic 55.0%
GTTCAGACTCCCGAAGAGTG+TGG - Chr3:29018598-29018617 MsG0380013032.01.T01:intron 55.0%
TGACTCCCCTCCTGACAAGT+GGG - Chr3:29016496-29016515 MsG0380013032.01.T01:intron 55.0%
TGAGGAGCCGCCTGTTATTG+AGG - Chr3:29015924-29015943 MsG0380013032.01.T01:CDS 55.0%
! AGACTCCCGAAGAGTGTGGA+AGG - Chr3:29018602-29018621 MsG0380013032.01.T01:intron 55.0%
! AGTCTGGGATGGACCTGTCT+GGG + Chr3:29015788-29015807 None:intergenic 55.0%
! TAGTCTGGGATGGACCTGTC+TGG + Chr3:29015789-29015808 None:intergenic 55.0%
! TCCCAGTGATGGGAATGCCT+AGG + Chr3:29016640-29016659 None:intergenic 55.0%
! TTGGTGGACATGTGGCAGGT+AGG - Chr3:29016088-29016107 MsG0380013032.01.T01:CDS 55.0%
!! AACTGGTACTGGTGAGGCTG+AGG + Chr3:29015883-29015902 None:intergenic 55.0%
!! CGGCGACAGAGTGATGGATT+GGG - Chr3:29016916-29016935 MsG0380013032.01.T01:intron 55.0%
!! GGGTGAAAGGTATCTCCCAC+GGG - Chr3:29016389-29016408 MsG0380013032.01.T01:intron 55.0%
ACTGCGTCGGGTCCATAGTC+TGG + Chr3:29015804-29015823 None:intergenic 60.0%
CAGGGGTCAACATCCCAGAC+AGG - Chr3:29015772-29015791 MsG0380013032.01.T01:CDS 60.0%
CTGACTCCCCTCCTGACAAG+TGG - Chr3:29016495-29016514 MsG0380013032.01.T01:intron 60.0%
CTGCGTCGGGTCCATAGTCT+GGG + Chr3:29015803-29015822 None:intergenic 60.0%
GAGAGTTCAGAAGGACCCCC+TGG + Chr3:29016054-29016073 None:intergenic 60.0%
GTCGGGTCCATAGTCTGGGA+TGG + Chr3:29015799-29015818 None:intergenic 60.0%
GTTGAGCGGCGACAGAGTGA+TGG - Chr3:29016910-29016929 MsG0380013032.01.T01:intron 60.0%
TCATGCTGCTGAGGCTGCTC+AGG + Chr3:29015970-29015989 None:intergenic 60.0%
TGTCAGGAGGGGAGTCAGAC+CGG + Chr3:29016493-29016512 None:intergenic 60.0%
! AGCCCGAGCCTCGTTTTCAG+GGG - Chr3:29015992-29016011 MsG0380013032.01.T01:CDS 60.0%
! CAGCCCGAGCCTCGTTTTCA+GGG - Chr3:29015991-29016010 MsG0380013032.01.T01:CDS 60.0%
! CGAGGAGAGGTGTGGGTAGT+AGG - Chr3:29018376-29018395 MsG0380013032.01.T01:intron 60.0%
!! GCGGCGACAGAGTGATGGAT+TGG - Chr3:29016915-29016934 MsG0380013032.01.T01:intron 60.0%
ACAGGCGGCTCCTCAACAGC+AGG + Chr3:29015919-29015938 None:intergenic 65.0%
ACCCTCGGCCCCTGAAAACG+AGG + Chr3:29016003-29016022 None:intergenic 65.0%
CGGCCCCTGAAAACGAGGCT+CGG + Chr3:29015998-29016017 None:intergenic 65.0%
GGCCCCTGAAAACGAGGCTC+GGG + Chr3:29015997-29016016 None:intergenic 65.0%
TCGGGCTGCTCATGCTGCTG+AGG + Chr3:29015979-29015998 None:intergenic 65.0%
! GCAGCCCGAGCCTCGTTTTC+AGG - Chr3:29015990-29016009 MsG0380013032.01.T01:CDS 65.0%
!! AGCCTCGTTTTCAGGGGCCG+AGG - Chr3:29015998-29016017 MsG0380013032.01.T01:CDS 65.0%
!! GCCTCGTTTTCAGGGGCCGA+GGG - Chr3:29015999-29016018 MsG0380013032.01.T01:CDS 65.0%
!! TCGTTTTCAGGGGCCGAGGG+TGG - Chr3:29016002-29016021 MsG0380013032.01.T01:CDS 65.0%
CCCTGGATAGCCGTCCGGAC+CGG + Chr3:29016037-29016056 None:intergenic 70.0%
CCGAGGGTGGTGTACGAGGC+CGG - Chr3:29016015-29016034 MsG0380013032.01.T01:CDS 70.0%
CCGGCCTCGTACACCACCCT+CGG + Chr3:29016018-29016037 None:intergenic 70.0%
CCGGTCCGGACGGCTATCCA+GGG - Chr3:29016034-29016053 MsG0380013032.01.T01:CDS 70.0%
CGGTCCGGACGGCTATCCAG+GGG - Chr3:29016035-29016054 MsG0380013032.01.T01:CDS 70.0%
GGACCCCCTGGATAGCCGTC+CGG + Chr3:29016042-29016061 None:intergenic 70.0%
GGTCCGGACGGCTATCCAGG+GGG - Chr3:29016036-29016055 MsG0380013032.01.T01:CDS 70.0%
GGTGGTGTACGAGGCCGGTC+CGG - Chr3:29016020-29016039 MsG0380013032.01.T01:CDS 70.0%
GTGTACGAGGCCGGTCCGGA+CGG - Chr3:29016024-29016043 MsG0380013032.01.T01:CDS 70.0%
GCCGGTCCGGACGGCTATCC+AGG - Chr3:29016033-29016052 MsG0380013032.01.T01:CDS 75.0%
GGGGCCGAGGGTGGTGTACG+AGG - Chr3:29016011-29016030 MsG0380013032.01.T01:CDS 75.0%
Chromosome Type Strat End Strand Name
Chr3 gene 29015757 29019038 29015757 ID=MsG0380013032.01;Name=MsG0380013032.01
Chr3 mRNA 29015757 29019038 29015757 ID=MsG0380013032.01.T01;Parent=MsG0380013032.01;Name=MsG0380013032.01.T01;_AED=0.23;_eAED=0.23;_QI=0|0|0|1|1|1|2|0|312
Chr3 exon 29018667 29019038 29018667 ID=MsG0380013032.01.T01:exon:6904;Parent=MsG0380013032.01.T01
Chr3 exon 29015757 29016323 29015757 ID=MsG0380013032.01.T01:exon:6905;Parent=MsG0380013032.01.T01
Chr3 CDS 29018667 29019038 29018667 ID=MsG0380013032.01.T01:cds;Parent=MsG0380013032.01.T01
Chr3 CDS 29015757 29016323 29015757 ID=MsG0380013032.01.T01:cds;Parent=MsG0380013032.01.T01
Gene Sequence

>MsG0380013032.01.T01

ATGGATATGATGTTGCAGGGGTCAACATCCCAGACAGGTCCATCCCAGACTATGGACCCGACGCAGTATCAGCAGCATTATGACGTCTATCAGCAGCCGCATGATGCGTATCAGTTTCATGAGCCTCAGCCTCACCAGTACCAGTTTGTTATTGAGGAGCCTGCTGTTGAGGAGCCGCCTGTTATTGAGGAGCCTCAGCAGAATGATGAGCCTGAGCAGCCTCAGCAGCATGAGCAGCCCGAGCCTCGTTTTCAGGGGCCGAGGGTGGTGTACGAGGCCGGTCCGGACGGCTATCCAGGGGGTCCTTCTGAACTCTCGCTTTTACCTAACTTTGGTGGACATGTGGCAGGTAGGATATGGGTTGATGCCGATGGACAATGGGTGAATATACAATCTGAATTGCTACTTGATATAATTCGAAGGGTAGAAGAGACTGAGACTTCTTGGCCTTCTTGTGCTCCTGTGTGTGAATCATGGAGGGCCGTTACACAAGAGATTGTTCAGACTCCCGAAGAGTGTGGAAGGTTGACGTTTACTATTTCGTTAAATCAGCTGGGTCCTTGTGATTCTCCGATACAATGCTTCATCAGGAGGGATAGAGAAACTTCTGCGTATCTATTGTATTATGGACTGGTGCCATTGGAAAATGAGACTGATAAGATGTTATTAGCTGCCAAAAAGATAAGGAAGACAGCCGGCACAGACTTAATCATATCTATGGCTGTAGTCGATTTTTCTCGTTCCAGCAATGCGTATGTTGGAAAACTCAGGTCTAACATTTGGGGAACCAAGTTCACTATATACGACATTGACAGGCAACCTCCACATGGATCTGGAATTCAACCAAATAGCCGGTCCAGTAGGAGATTTCTTTCTAGGCAGGTGTCTCCAAGAGTTCAAGCATATAACTATATTGTTAGCACCATTCCTATGAGCTGA
Protein sequence

>MsG0380013032.01.T01

MDMMLQGSTSQTGPSQTMDPTQYQQHYDVYQQPHDAYQFHEPQPHQYQFVIEEPAVEEPPVIEEPQQNDEPEQPQQHEQPEPRFQGPRVVYEAGPDGYPGGPSELSLLPNFGGHVAGRIWVDADGQWVNIQSELLLDIIRRVEETETSWPSCAPVCESWRAVTQEIVQTPEECGRLTFTISLNQLGPCDSPIQCFIRRDRETSAYLLYYGLVPLENETDKMLLAAKKIRKTAGTDLIISMAVVDFSRSSNAYVGKLRSNIWGTKFTIYDIDRQPPHGSGIQPNSRSSRRFLSRQVSPRVQAYNYIVSTIPMS*