Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380013037.01.T02 | XP_003612033.1 | 83.871 | 155 | 23 | 1 | 1 | 155 | 89 | 241 | 8.74E-84 | 262 |
| MsG0380013037.01.T01 | XP_003612033.1 | 83.019 | 159 | 25 | 1 | 1 | 159 | 85 | 241 | 4.45E-85 | 266 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380013037.01.T01 | Q6Z2G9 | 56.875 | 160 | 65 | 3 | 1 | 159 | 98 | 254 | 5.86E-54 | 179 |
| MsG0380013037.01.T02 | Q6Z2G9 | 57.692 | 156 | 62 | 3 | 1 | 155 | 102 | 254 | 6.27E-53 | 176 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380013037.01.T01 | G7KEX1 | 83.019 | 159 | 25 | 1 | 1 | 159 | 85 | 241 | 2.12e-85 | 266 |
| MsG0380013037.01.T02 | G7KEX1 | 83.871 | 155 | 23 | 1 | 1 | 155 | 89 | 241 | 4.17e-84 | 262 |
| Gene ID | Type | Classification |
|---|---|---|
| MsG0380013037.01.T01 | TF | TUB |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380013037.01.T02 | MTR_5g020580 | 83.871 | 155 | 23 | 1 | 1 | 155 | 89 | 241 | 1.06e-87 | 262 |
| MsG0380013037.01.T02 | MTR_8g077195 | 62.581 | 155 | 56 | 1 | 1 | 155 | 87 | 239 | 5.33e-65 | 204 |
| MsG0380013037.01.T02 | MTR_8g077620 | 56.410 | 156 | 61 | 3 | 1 | 155 | 86 | 235 | 2.52e-52 | 171 |
| MsG0380013037.01.T02 | MTR_8g077675 | 53.846 | 156 | 66 | 3 | 1 | 155 | 82 | 232 | 2.58e-51 | 168 |
| MsG0380013037.01.T02 | MTR_1g022370 | 50.633 | 158 | 73 | 3 | 1 | 155 | 104 | 259 | 1.52e-45 | 154 |
| MsG0380013037.01.T02 | MTR_2g020280 | 51.613 | 155 | 73 | 1 | 1 | 155 | 73 | 225 | 4.17e-43 | 147 |
| MsG0380013037.01.T02 | MTR_1g098790 | 50.318 | 157 | 73 | 4 | 1 | 155 | 87 | 240 | 3.64e-41 | 142 |
| MsG0380013037.01.T02 | MTR_2g007930 | 50.943 | 159 | 71 | 5 | 1 | 155 | 88 | 243 | 1.12e-40 | 141 |
| MsG0380013037.01.T02 | MTR_2g076200 | 45.161 | 155 | 83 | 1 | 1 | 155 | 76 | 228 | 1.17e-38 | 135 |
| MsG0380013037.01.T02 | MTR_0210s0010 | 68.750 | 96 | 24 | 1 | 10 | 105 | 9 | 98 | 2.06e-36 | 122 |
| MsG0380013037.01.T02 | MTR_1g088960 | 48.000 | 150 | 75 | 2 | 1 | 150 | 84 | 230 | 1.33e-35 | 127 |
| MsG0380013037.01.T02 | MTR_2g076210 | 42.308 | 156 | 83 | 2 | 1 | 155 | 71 | 220 | 1.28e-33 | 121 |
| MsG0380013037.01.T02 | MTR_8g077640 | 51.908 | 131 | 40 | 3 | 3 | 115 | 131 | 256 | 4.19e-33 | 120 |
| MsG0380013037.01.T02 | MTR_2g020280 | 51.613 | 124 | 58 | 1 | 32 | 155 | 5 | 126 | 2.92e-31 | 114 |
| MsG0380013037.01.T02 | MTR_8g077650 | 46.970 | 132 | 59 | 6 | 16 | 143 | 44 | 168 | 2.19e-27 | 104 |
| MsG0380013037.01.T02 | MTR_0479s0040 | 66.667 | 72 | 18 | 1 | 24 | 95 | 10 | 75 | 9.15e-24 | 89.0 |
| MsG0380013037.01.T02 | MTR_1g023800 | 47.945 | 73 | 38 | 0 | 1 | 73 | 86 | 158 | 3.78e-16 | 71.6 |
| MsG0380013037.01.T01 | MTR_5g020580 | 83.019 | 159 | 25 | 1 | 1 | 159 | 85 | 241 | 5.39e-89 | 266 |
| MsG0380013037.01.T01 | MTR_8g077195 | 62.025 | 158 | 58 | 1 | 2 | 159 | 84 | 239 | 1.02e-65 | 206 |
| MsG0380013037.01.T01 | MTR_8g077620 | 55.975 | 159 | 63 | 3 | 2 | 159 | 83 | 235 | 4.54e-53 | 173 |
| MsG0380013037.01.T01 | MTR_8g077675 | 53.459 | 159 | 68 | 3 | 2 | 159 | 79 | 232 | 6.85e-52 | 170 |
| MsG0380013037.01.T01 | MTR_1g022370 | 50.000 | 162 | 76 | 3 | 1 | 159 | 100 | 259 | 1.64e-46 | 157 |
| MsG0380013037.01.T01 | MTR_2g020280 | 50.943 | 159 | 76 | 1 | 1 | 159 | 69 | 225 | 4.67e-44 | 149 |
| MsG0380013037.01.T01 | MTR_1g098790 | 49.689 | 161 | 76 | 4 | 1 | 159 | 83 | 240 | 3.27e-42 | 145 |
| MsG0380013037.01.T01 | MTR_2g007930 | 50.307 | 163 | 74 | 5 | 1 | 159 | 84 | 243 | 1.89e-41 | 143 |
| MsG0380013037.01.T01 | MTR_2g076200 | 45.625 | 160 | 83 | 3 | 1 | 159 | 72 | 228 | 2.91e-39 | 136 |
| MsG0380013037.01.T01 | MTR_1g088960 | 47.403 | 154 | 78 | 2 | 1 | 154 | 80 | 230 | 1.16e-36 | 130 |
| MsG0380013037.01.T01 | MTR_0210s0010 | 68.750 | 96 | 24 | 1 | 14 | 109 | 9 | 98 | 2.58e-36 | 121 |
| MsG0380013037.01.T01 | MTR_2g076210 | 41.875 | 160 | 86 | 2 | 1 | 159 | 67 | 220 | 2.02e-34 | 124 |
| MsG0380013037.01.T01 | MTR_8g077640 | 51.908 | 131 | 40 | 3 | 7 | 119 | 131 | 256 | 3.83e-33 | 120 |
| MsG0380013037.01.T01 | MTR_2g020280 | 51.613 | 124 | 58 | 1 | 36 | 159 | 5 | 126 | 3.56e-31 | 114 |
| MsG0380013037.01.T01 | MTR_8g077650 | 46.970 | 132 | 59 | 6 | 20 | 147 | 44 | 168 | 2.99e-27 | 104 |
| MsG0380013037.01.T01 | MTR_0479s0040 | 66.667 | 72 | 18 | 1 | 28 | 99 | 10 | 75 | 1.09e-23 | 88.6 |
| MsG0380013037.01.T01 | MTR_1g023800 | 46.753 | 77 | 41 | 0 | 1 | 77 | 82 | 158 | 4.22e-17 | 74.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380013037.01.T02 | AT2G18280 | 54.839 | 155 | 65 | 2 | 1 | 155 | 82 | 231 | 3.96e-52 | 170 |
| MsG0380013037.01.T02 | AT2G18280 | 54.839 | 155 | 65 | 2 | 1 | 155 | 82 | 231 | 3.96e-52 | 170 |
| MsG0380013037.01.T02 | AT1G47270 | 49.315 | 146 | 63 | 3 | 1 | 145 | 78 | 213 | 5.97e-41 | 141 |
| MsG0380013037.01.T02 | AT1G47270 | 49.315 | 146 | 63 | 3 | 1 | 145 | 102 | 237 | 8.96e-41 | 141 |
| MsG0380013037.01.T02 | AT1G47270 | 49.315 | 146 | 63 | 3 | 1 | 145 | 103 | 238 | 9.51e-41 | 141 |
| MsG0380013037.01.T02 | AT1G76900 | 50.000 | 160 | 72 | 4 | 1 | 155 | 91 | 247 | 1.19e-40 | 142 |
| MsG0380013037.01.T02 | AT1G76900 | 50.000 | 160 | 72 | 4 | 1 | 155 | 91 | 247 | 1.19e-40 | 142 |
| MsG0380013037.01.T02 | AT1G76900 | 50.000 | 160 | 72 | 4 | 1 | 155 | 91 | 247 | 1.19e-40 | 142 |
| MsG0380013037.01.T02 | AT1G25280 | 52.229 | 157 | 73 | 2 | 1 | 155 | 93 | 249 | 2.64e-39 | 138 |
| MsG0380013037.01.T02 | AT1G53320 | 44.516 | 155 | 84 | 1 | 1 | 155 | 78 | 230 | 6.23e-39 | 135 |
| MsG0380013037.01.T02 | AT2G47900 | 48.408 | 157 | 77 | 2 | 1 | 155 | 86 | 240 | 7.14e-39 | 136 |
| MsG0380013037.01.T02 | AT2G47900 | 48.718 | 156 | 77 | 2 | 1 | 155 | 86 | 239 | 1.06e-38 | 135 |
| MsG0380013037.01.T02 | AT2G47900 | 48.718 | 156 | 77 | 2 | 1 | 155 | 86 | 239 | 1.06e-38 | 135 |
| MsG0380013037.01.T02 | AT3G06380 | 47.742 | 155 | 75 | 3 | 1 | 155 | 68 | 216 | 1.10e-37 | 132 |
| MsG0380013037.01.T02 | AT1G43640 | 44.304 | 158 | 82 | 4 | 1 | 155 | 23 | 177 | 2.55e-36 | 129 |
| MsG0380013037.01.T02 | AT1G43640 | 44.304 | 158 | 82 | 4 | 1 | 155 | 89 | 243 | 6.56e-36 | 129 |
| MsG0380013037.01.T02 | AT5G18680 | 46.452 | 155 | 80 | 1 | 1 | 155 | 74 | 225 | 6.54e-35 | 125 |
| MsG0380013037.01.T02 | AT5G18680 | 45.385 | 130 | 68 | 1 | 26 | 155 | 7 | 133 | 1.24e-25 | 99.4 |
| MsG0380013037.01.T02 | AT3G06380 | 45.238 | 126 | 63 | 3 | 30 | 155 | 5 | 124 | 1.92e-25 | 98.6 |
| MsG0380013037.01.T02 | AT1G25280 | 50.704 | 71 | 34 | 1 | 86 | 155 | 1 | 71 | 1.73e-12 | 63.5 |
| MsG0380013037.01.T02 | AT1G25280 | 50.704 | 71 | 34 | 1 | 86 | 155 | 1 | 71 | 1.73e-12 | 63.5 |
| MsG0380013037.01.T01 | AT2G18280 | 54.717 | 159 | 67 | 2 | 1 | 159 | 78 | 231 | 2.04e-53 | 174 |
| MsG0380013037.01.T01 | AT2G18280 | 54.717 | 159 | 67 | 2 | 1 | 159 | 78 | 231 | 2.04e-53 | 174 |
| MsG0380013037.01.T01 | AT1G47270 | 48.667 | 150 | 66 | 3 | 1 | 149 | 74 | 213 | 5.49e-42 | 144 |
| MsG0380013037.01.T01 | AT1G47270 | 48.667 | 150 | 66 | 3 | 1 | 149 | 98 | 237 | 7.41e-42 | 144 |
| MsG0380013037.01.T01 | AT1G47270 | 48.667 | 150 | 66 | 3 | 1 | 149 | 99 | 238 | 7.87e-42 | 144 |
| MsG0380013037.01.T01 | AT1G76900 | 49.390 | 164 | 75 | 4 | 1 | 159 | 87 | 247 | 1.07e-41 | 145 |
| MsG0380013037.01.T01 | AT1G76900 | 49.390 | 164 | 75 | 4 | 1 | 159 | 87 | 247 | 1.07e-41 | 145 |
| MsG0380013037.01.T01 | AT1G76900 | 49.390 | 164 | 75 | 4 | 1 | 159 | 87 | 247 | 1.07e-41 | 145 |
| MsG0380013037.01.T01 | AT1G25280 | 51.553 | 161 | 76 | 2 | 1 | 159 | 89 | 249 | 2.70e-40 | 140 |
| MsG0380013037.01.T01 | AT2G47900 | 48.447 | 161 | 79 | 2 | 1 | 159 | 82 | 240 | 3.15e-40 | 140 |
| MsG0380013037.01.T01 | AT2G47900 | 48.750 | 160 | 79 | 2 | 1 | 159 | 82 | 239 | 4.62e-40 | 139 |
| MsG0380013037.01.T01 | AT2G47900 | 48.750 | 160 | 79 | 2 | 1 | 159 | 82 | 239 | 4.62e-40 | 139 |
| MsG0380013037.01.T01 | AT1G53320 | 44.025 | 159 | 87 | 1 | 1 | 159 | 74 | 230 | 1.09e-39 | 138 |
| MsG0380013037.01.T01 | AT3G06380 | 47.170 | 159 | 78 | 3 | 1 | 159 | 64 | 216 | 9.43e-39 | 135 |
| MsG0380013037.01.T01 | AT1G43640 | 43.827 | 162 | 85 | 4 | 1 | 159 | 19 | 177 | 3.10e-37 | 131 |
| MsG0380013037.01.T01 | AT1G43640 | 43.827 | 162 | 85 | 4 | 1 | 159 | 85 | 243 | 8.39e-37 | 131 |
| MsG0380013037.01.T01 | AT5G18680 | 45.912 | 159 | 83 | 1 | 1 | 159 | 70 | 225 | 6.40e-36 | 128 |
| MsG0380013037.01.T01 | AT5G18680 | 45.385 | 130 | 68 | 1 | 30 | 159 | 7 | 133 | 1.47e-25 | 99.4 |
| MsG0380013037.01.T01 | AT3G06380 | 45.238 | 126 | 63 | 3 | 34 | 159 | 5 | 124 | 2.21e-25 | 98.6 |
| MsG0380013037.01.T01 | AT1G25280 | 50.704 | 71 | 34 | 1 | 90 | 159 | 1 | 71 | 2.21e-12 | 63.5 |
| MsG0380013037.01.T01 | AT1G25280 | 50.704 | 71 | 34 | 1 | 90 | 159 | 1 | 71 | 2.21e-12 | 63.5 |
| MsG0380013037.01.T01 | AT1G61940 | 43.333 | 60 | 34 | 0 | 1 | 60 | 28 | 87 | 7.23e-12 | 62.0 |
Find 41 sgRNAs with CRISPR-Local
Find 44 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAAACTCAGGTCTAACATTT+TGG | 0.098131 | 3:-29107539 | MsG0380013037.01.T01:CDS |
| CTCCTACTGGACCGGCTATT+TGG | 0.181607 | 3:+29107457 | None:intergenic |
| CCAGTAGGAGATTTCTTTCT+AGG | 0.241845 | 3:-29107444 | MsG0380013037.01.T01:CDS |
| CGTCAACCTTCCACACTCTT+CGG | 0.358084 | 3:+29107792 | None:intergenic |
| CACAGACTTAATCATATCTA+TGG | 0.360821 | 3:-29107602 | MsG0380013037.01.T01:CDS |
| GTCAACCTTCCACACTCTTC+GGG | 0.361120 | 3:+29107793 | None:intergenic |
| TCATATTTCGTTAAATCAGC+TGG | 0.364782 | 3:-29107767 | MsG0380013037.01.T01:CDS |
| TCTGCGTATCTATTGTGTTA+TGG | 0.366501 | 3:-29107694 | MsG0380013037.01.T01:CDS |
| TAGTTATATGCTTGAACTCT+TGG | 0.377661 | 3:+29107412 | None:intergenic |
| AGGCAACCTCCACACGGATC+TGG | 0.416160 | 3:-29107487 | MsG0380013037.01.T01:CDS |
| CTCCGATACAATGCTTCATC+AGG | 0.436765 | 3:-29107732 | MsG0380013037.01.T01:CDS |
| ATAAGAGCAATTCAGCTCAT+AGG | 0.461752 | 3:+29107373 | None:intergenic |
| TAGGAGATTTCTTTCTAGGC+AGG | 0.469861 | 3:-29107440 | MsG0380013037.01.T01:CDS |
| CGTTCCAGCAATGCGTATGT+TGG | 0.488866 | 3:-29107562 | MsG0380013037.01.T01:CDS |
| CATATTTCGTTAAATCAGCT+GGG | 0.507372 | 3:-29107766 | MsG0380013037.01.T01:CDS |
| GTACTCCTGTGTGTGAATCA+TGG | 0.512410 | 3:-29107846 | MsG0380013037.01.T01:CDS |
| CCTAGAAAGAAATCTCCTAC+TGG | 0.516235 | 3:+29107444 | None:intergenic |
| TCACTATATACGACATTGAC+AGG | 0.521151 | 3:-29107507 | MsG0380013037.01.T01:CDS |
| AAAGAAATCTCCTACTGGAC+CGG | 0.552476 | 3:+29107449 | None:intergenic |
| GTATCTATTGTGTTATGGAC+TGG | 0.561620 | 3:-29107689 | MsG0380013037.01.T01:CDS |
| AGATATGATTAAGTCTGTGC+CGG | 0.566788 | 3:+29107606 | None:intergenic |
| CGATACAATGCTTCATCAGG+AGG | 0.568935 | 3:-29107729 | MsG0380013037.01.T01:CDS |
| GTGTTATGGACTGGTGCCAT+TGG | 0.572537 | 3:-29107680 | MsG0380013037.01.T01:CDS |
| AATGTCGTATATAGTGAACT+TGG | 0.574240 | 3:+29107513 | None:intergenic |
| CTGGAATTCAACCAAATAGC+CGG | 0.579251 | 3:-29107468 | MsG0380013037.01.T01:CDS |
| CTCCTGATGAAGCATTGTAT+CGG | 0.592254 | 3:+29107730 | None:intergenic |
| CTGAACAATCTCTTGTGTAA+CGG | 0.594307 | 3:+29107819 | None:intergenic |
| ATGCGTATGTTGGAAAACTC+AGG | 0.599772 | 3:-29107552 | MsG0380013037.01.T01:CDS |
| AGCAATTCAGCTCATAGGAA+TGG | 0.603316 | 3:+29107378 | None:intergenic |
| AGACTCCCGAAGAGTGTGGA+AGG | 0.609764 | 3:-29107798 | MsG0380013037.01.T01:CDS |
| TCCTGTGTGTGAATCATGGA+GGG | 0.622280 | 3:-29107842 | MsG0380013037.01.T01:CDS |
| TCACACACAGGAGTACAAGA+AGG | 0.639441 | 3:+29107853 | None:intergenic |
| CATTGTATCGGAGAATCACA+AGG | 0.642254 | 3:+29107742 | None:intergenic |
| GTTCAGACTCCCGAAGAGTG+TGG | 0.642949 | 3:-29107802 | MsG0380013037.01.T01:CDS |
| GCCCTCCATGATTCACACAC+AGG | 0.656658 | 3:+29107841 | None:intergenic |
| AACCAAATAGCCGGTCCAGT+AGG | 0.657951 | 3:-29107459 | MsG0380013037.01.T01:CDS |
| TGAATTCCAGATCCGTGTGG+AGG | 0.662267 | 3:+29107481 | None:intergenic |
| CTCCTGTGTGTGAATCATGG+AGG | 0.667171 | 3:-29107843 | MsG0380013037.01.T01:CDS |
| GATACAATGCTTCATCAGGA+GGG | 0.667883 | 3:-29107728 | MsG0380013037.01.T01:CDS |
| ATTGACAGGCAACCTCCACA+CGG | 0.696401 | 3:-29107493 | MsG0380013037.01.T01:CDS |
| GGTTGAATTCCAGATCCGTG+TGG | 0.703459 | 3:+29107478 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| AATGTCGTATATAGTGAACT+TGG | + | Chr3:29107724-29107743 | None:intergenic | 30.0% | |
| CACAGACTTAATCATATCTA+TGG | - | Chr3:29107632-29107651 | MsG0380013037.01.T01:CDS | 30.0% | |
| CATATTTCGTTAAATCAGCT+GGG | - | Chr3:29107468-29107487 | MsG0380013037.01.T01:CDS | 30.0% | |
| TAGTTATATGCTTGAACTCT+TGG | + | Chr3:29107825-29107844 | None:intergenic | 30.0% | |
| TATTAGCTGCCAAAAAGATA+AGG | - | Chr3:29107598-29107617 | MsG0380013037.01.T01:CDS | 30.0% | |
| TCATATTTCGTTAAATCAGC+TGG | - | Chr3:29107467-29107486 | MsG0380013037.01.T01:CDS | 30.0% | |
| ! | AAAACTCAGGTCTAACATTT+TGG | - | Chr3:29107695-29107714 | MsG0380013037.01.T01:CDS | 30.0% |
| ! | AAACTCAGGTCTAACATTTT+GGG | - | Chr3:29107696-29107715 | MsG0380013037.01.T01:CDS | 30.0% |
| ! | TTATCAGTCTCATTTTCCAA+TGG | + | Chr3:29107573-29107592 | None:intergenic | 30.0% |
| AAAAAGATAAGGAAGACTGC+CGG | - | Chr3:29107609-29107628 | MsG0380013037.01.T01:CDS | 35.0% | |
| AGATATGATTAAGTCTGTGC+CGG | + | Chr3:29107631-29107650 | None:intergenic | 35.0% | |
| CTGAACAATCTCTTGTGTAA+CGG | + | Chr3:29107418-29107437 | None:intergenic | 35.0% | |
| GTATCTATTGTGTTATGGAC+TGG | - | Chr3:29107545-29107564 | MsG0380013037.01.T01:CDS | 35.0% | |
| TCACTATATACGACATTGAC+AGG | - | Chr3:29107727-29107746 | MsG0380013037.01.T01:CDS | 35.0% | |
| TCTGCGTATCTATTGTGTTA+TGG | - | Chr3:29107540-29107559 | MsG0380013037.01.T01:CDS | 35.0% | |
| AAAGAAATCTCCTACTGGAC+CGG | + | Chr3:29107788-29107807 | None:intergenic | 40.0% | |
| ATGCGTATGTTGGAAAACTC+AGG | - | Chr3:29107682-29107701 | MsG0380013037.01.T01:CDS | 40.0% | |
| CATTGTATCGGAGAATCACA+AGG | + | Chr3:29107495-29107514 | None:intergenic | 40.0% | |
| CCAGTAGGAGATTTCTTTCT+AGG | - | Chr3:29107790-29107809 | MsG0380013037.01.T01:CDS | 40.0% | |
| CCTAGAAAGAAATCTCCTAC+TGG | + | Chr3:29107793-29107812 | None:intergenic | 40.0% | |
| CTGGAATTCAACCAAATAGC+CGG | - | Chr3:29107766-29107785 | MsG0380013037.01.T01:CDS | 40.0% | |
| GATACAATGCTTCATCAGGA+GGG | - | Chr3:29107506-29107525 | MsG0380013037.01.T01:CDS | 40.0% | |
| TAGGAGATTTCTTTCTAGGC+AGG | - | Chr3:29107794-29107813 | MsG0380013037.01.T01:CDS | 40.0% | |
| ! | GGCAGTCTTCCTTATCTTTT+TGG | + | Chr3:29107610-29107629 | None:intergenic | 40.0% |
| ! | TTTTCCAACATACGCATTGC+TGG | + | Chr3:29107679-29107698 | None:intergenic | 40.0% |
| !! | CTCCTGATGAAGCATTGTAT+CGG | + | Chr3:29107507-29107526 | None:intergenic | 40.0% |
| CGATACAATGCTTCATCAGG+AGG | - | Chr3:29107505-29107524 | MsG0380013037.01.T01:CDS | 45.0% | |
| CTCCGATACAATGCTTCATC+AGG | - | Chr3:29107502-29107521 | MsG0380013037.01.T01:CDS | 45.0% | |
| GTACTCCTGTGTGTGAATCA+TGG | - | Chr3:29107388-29107407 | MsG0380013037.01.T01:CDS | 45.0% | |
| TCCTGTGTGTGAATCATGGA+GGG | - | Chr3:29107392-29107411 | MsG0380013037.01.T01:CDS | 45.0% | |
| AACCAAATAGCCGGTCCAGT+AGG | - | Chr3:29107775-29107794 | MsG0380013037.01.T01:CDS | 50.0% | |
| ATTGACAGGCAACCTCCACA+CGG | - | Chr3:29107741-29107760 | MsG0380013037.01.T01:CDS | 50.0% | |
| CGTCAACCTTCCACACTCTT+CGG | + | Chr3:29107445-29107464 | None:intergenic | 50.0% | |
| CGTTCCAGCAATGCGTATGT+TGG | - | Chr3:29107672-29107691 | MsG0380013037.01.T01:CDS | 50.0% | |
| CTCCTGTGTGTGAATCATGG+AGG | - | Chr3:29107391-29107410 | MsG0380013037.01.T01:CDS | 50.0% | |
| GGTTGAATTCCAGATCCGTG+TGG | + | Chr3:29107759-29107778 | None:intergenic | 50.0% | |
| GTCAACCTTCCACACTCTTC+GGG | + | Chr3:29107444-29107463 | None:intergenic | 50.0% | |
| TGAATTCCAGATCCGTGTGG+AGG | + | Chr3:29107756-29107775 | None:intergenic | 50.0% | |
| !! | GTGTTATGGACTGGTGCCAT+TGG | - | Chr3:29107554-29107573 | MsG0380013037.01.T01:CDS | 50.0% |
| CTCCTACTGGACCGGCTATT+TGG | + | Chr3:29107780-29107799 | None:intergenic | 55.0% | |
| GCCCTCCATGATTCACACAC+AGG | + | Chr3:29107396-29107415 | None:intergenic | 55.0% | |
| GTTCAGACTCCCGAAGAGTG+TGG | - | Chr3:29107432-29107451 | MsG0380013037.01.T01:CDS | 55.0% | |
| ! | AGACTCCCGAAGAGTGTGGA+AGG | - | Chr3:29107436-29107455 | MsG0380013037.01.T01:CDS | 55.0% |
| AGGCAACCTCCACACGGATC+TGG | - | Chr3:29107747-29107766 | MsG0380013037.01.T01:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr3 | gene | 29107384 | 29107872 | 29107384 | ID=MsG0380013037.01;Name=MsG0380013037.01 |
| Chr3 | mRNA | 29107384 | 29107872 | 29107384 | ID=MsG0380013037.01.T01;Parent=MsG0380013037.01;Name=MsG0380013037.01.T01;_AED=0.18;_eAED=0.18;_QI=0|-1|0|1|-1|0|1|0|162 |
| Chr3 | exon | 29107384 | 29107872 | 29107384 | ID=MsG0380013037.01.T01:exon:7196;Parent=MsG0380013037.01.T01 |
| Chr3 | CDS | 29107384 | 29107872 | 29107384 | ID=MsG0380013037.01.T01:cds;Parent=MsG0380013037.01.T01 |
| Chr3 | mRNA | 29107384 | 29107860 | 29107384 | ID=MsG0380013037.01.T02;Parent=MsG0380013037.01;Name=MsG0380013037.01.T02;_AED=0.19;_eAED=0.19;_QI=0|-1|0|1|-1|0|1|0|158 |
| Chr3 | exon | 29107384 | 29107860 | 29107384 | ID=MsG0380013037.01.T02:exon:7197;Parent=MsG0380013037.01.T02 |
| Chr3 | CDS | 29107384 | 29107860 | 29107384 | ID=MsG0380013037.01.T02:cds;Parent=MsG0380013037.01.T02 |
| Gene Sequence |
| Protein sequence |
