Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380013123.01.T03 | KEH33323.1 | 91.593 | 452 | 38 | 0 | 1 | 452 | 18 | 469 | 0 | 862 |
| MsG0380013123.01.T01 | XP_013459292.2 | 87.389 | 452 | 38 | 1 | 1 | 433 | 1 | 452 | 0 | 816 |
| MsG0380013123.01.T02 | XP_013459292.2 | 80.752 | 452 | 34 | 1 | 1 | 399 | 1 | 452 | 0 | 743 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380013123.01.T01 | P93755 | 55.2 | 375 | 127 | 4 | 1 | 341 | 34 | 401 | 1.71E-129 | 393 |
| MsG0380013123.01.T02 | P93755 | 49.728 | 368 | 124 | 6 | 1 | 307 | 34 | 401 | 3.19E-106 | 331 |
| MsG0380013123.01.T03 | P93755 | 55.882 | 374 | 145 | 5 | 1 | 360 | 34 | 401 | 1.69E-129 | 394 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380013123.01.T01 | A0A072UW95 | 87.389 | 452 | 38 | 1 | 1 | 433 | 18 | 469 | 0.0 | 816 |
| MsG0380013123.01.T02 | A0A072UW95 | 80.752 | 452 | 34 | 1 | 1 | 399 | 18 | 469 | 0.0 | 742 |
| MsG0380013123.01.T03 | A0A072UW95 | 91.593 | 452 | 38 | 0 | 1 | 452 | 18 | 469 | 0.0 | 862 |
| MsG0380013123.01.T04 | A0A0A9VPT4 | 41.667 | 132 | 72 | 1 | 58 | 184 | 4 | 135 | 4.39e-15 | 79.3 |
| Gene ID | Type | Classification |
|---|---|---|
| MsG0380013123.01.T01 | TF | C3H |
| MsG0380013123.01.T02 | TF | C3H |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380013123.01.T03 | MTR_3g435590 | 91.593 | 452 | 38 | 0 | 1 | 452 | 18 | 469 | 0.0 | 862 |
| MsG0380013123.01.T03 | MTR_3g029590 | 66.667 | 465 | 91 | 4 | 1 | 401 | 31 | 495 | 0.0 | 558 |
| MsG0380013123.01.T03 | MTR_3g029590 | 67.857 | 56 | 17 | 1 | 397 | 451 | 626 | 681 | 1.24e-15 | 79.7 |
| MsG0380013123.01.T03 | MTR_3g435680 | 61.593 | 427 | 92 | 9 | 63 | 452 | 5 | 396 | 3.03e-166 | 474 |
| MsG0380013123.01.T03 | MTR_7g092070 | 50.964 | 467 | 159 | 7 | 1 | 401 | 33 | 495 | 2.15e-138 | 414 |
| MsG0380013123.01.T03 | MTR_7g092070 | 45.333 | 75 | 40 | 1 | 378 | 451 | 601 | 675 | 7.87e-11 | 64.7 |
| MsG0380013123.01.T03 | MTR_1g050438 | 46.916 | 454 | 178 | 7 | 1 | 395 | 1 | 450 | 3.54e-126 | 379 |
| MsG0380013123.01.T03 | MTR_0728s0020 | 46.916 | 454 | 178 | 7 | 1 | 395 | 17 | 466 | 1.55e-125 | 378 |
| MsG0380013123.01.T03 | MTR_5g082830 | 48.000 | 325 | 148 | 3 | 13 | 336 | 28 | 332 | 1.33e-99 | 313 |
| MsG0380013123.01.T03 | MTR_1g075890 | 47.692 | 325 | 160 | 2 | 12 | 336 | 30 | 344 | 4.31e-92 | 292 |
| MsG0380013123.01.T03 | MTR_5g071070 | 45.355 | 366 | 166 | 7 | 12 | 366 | 32 | 374 | 9.73e-91 | 290 |
| MsG0380013123.01.T03 | MTR_3g070880 | 43.438 | 320 | 128 | 2 | 13 | 332 | 8 | 274 | 7.43e-86 | 272 |
| MsG0380013123.01.T03 | MTR_5g071070 | 46.474 | 312 | 139 | 5 | 63 | 366 | 1 | 292 | 1.16e-80 | 261 |
| MsG0380013123.01.T03 | MTR_3g464260 | 41.613 | 310 | 129 | 6 | 20 | 328 | 30 | 288 | 1.38e-61 | 209 |
| MsG0380013123.01.T03 | MTR_3g464280 | 35.390 | 308 | 130 | 4 | 17 | 324 | 19 | 257 | 3.35e-49 | 175 |
| MsG0380013123.01.T03 | MTR_8g102100 | 60.833 | 120 | 46 | 1 | 217 | 335 | 77 | 196 | 3.99e-48 | 169 |
| MsG0380013123.01.T03 | MTR_6g090380 | 65.421 | 107 | 37 | 0 | 217 | 323 | 99 | 205 | 6.80e-48 | 169 |
| MsG0380013123.01.T03 | MTR_3g103960 | 38.866 | 247 | 135 | 7 | 211 | 452 | 43 | 278 | 1.22e-46 | 162 |
| MsG0380013123.01.T03 | MTR_4g078660 | 48.201 | 139 | 66 | 2 | 191 | 323 | 24 | 162 | 5.74e-42 | 151 |
| MsG0380013123.01.T03 | MTR_2g090605 | 62.136 | 103 | 39 | 0 | 221 | 323 | 77 | 179 | 8.66e-42 | 153 |
| MsG0380013123.01.T03 | MTR_3g464290 | 63.542 | 96 | 34 | 1 | 200 | 294 | 79 | 174 | 2.70e-36 | 139 |
| MsG0380013123.01.T03 | MTR_3g464270 | 50.833 | 120 | 58 | 1 | 220 | 338 | 8 | 127 | 1.31e-35 | 135 |
| MsG0380013123.01.T01 | MTR_3g435590 | 87.389 | 452 | 38 | 1 | 1 | 433 | 18 | 469 | 0.0 | 816 |
| MsG0380013123.01.T01 | MTR_3g029590 | 63.226 | 465 | 88 | 4 | 1 | 382 | 31 | 495 | 0.0 | 526 |
| MsG0380013123.01.T01 | MTR_3g029590 | 67.857 | 56 | 17 | 1 | 378 | 432 | 626 | 681 | 9.24e-16 | 80.1 |
| MsG0380013123.01.T01 | MTR_3g435680 | 58.548 | 427 | 86 | 9 | 63 | 433 | 5 | 396 | 4.92e-155 | 444 |
| MsG0380013123.01.T01 | MTR_7g092070 | 48.822 | 467 | 150 | 5 | 1 | 382 | 33 | 495 | 2.93e-132 | 398 |
| MsG0380013123.01.T01 | MTR_7g092070 | 45.333 | 75 | 40 | 1 | 359 | 432 | 601 | 675 | 8.63e-11 | 64.3 |
| MsG0380013123.01.T01 | MTR_1g050438 | 45.815 | 454 | 164 | 7 | 1 | 376 | 1 | 450 | 2.50e-126 | 378 |
| MsG0380013123.01.T01 | MTR_0728s0020 | 45.815 | 454 | 164 | 7 | 1 | 376 | 17 | 466 | 7.44e-126 | 378 |
| MsG0380013123.01.T01 | MTR_5g082830 | 50.974 | 308 | 145 | 3 | 13 | 317 | 28 | 332 | 1.47e-102 | 320 |
| MsG0380013123.01.T01 | MTR_5g071070 | 47.278 | 349 | 165 | 6 | 12 | 347 | 32 | 374 | 1.67e-94 | 299 |
| MsG0380013123.01.T01 | MTR_1g075890 | 48.265 | 317 | 151 | 2 | 12 | 317 | 30 | 344 | 4.88e-93 | 294 |
| MsG0380013123.01.T01 | MTR_3g070880 | 46.512 | 301 | 127 | 3 | 13 | 313 | 8 | 274 | 7.03e-88 | 277 |
| MsG0380013123.01.T01 | MTR_5g071070 | 48.814 | 295 | 138 | 4 | 63 | 347 | 1 | 292 | 1.89e-84 | 271 |
| MsG0380013123.01.T01 | MTR_3g464260 | 41.722 | 302 | 121 | 5 | 20 | 309 | 30 | 288 | 8.02e-64 | 214 |
| MsG0380013123.01.T01 | MTR_3g464280 | 36.678 | 289 | 133 | 3 | 17 | 305 | 19 | 257 | 3.70e-52 | 182 |
| MsG0380013123.01.T01 | MTR_8g102100 | 60.833 | 120 | 46 | 1 | 198 | 316 | 77 | 196 | 1.97e-48 | 170 |
| MsG0380013123.01.T01 | MTR_6g090380 | 65.421 | 107 | 37 | 0 | 198 | 304 | 99 | 205 | 3.54e-48 | 169 |
| MsG0380013123.01.T01 | MTR_3g103960 | 38.866 | 247 | 135 | 7 | 192 | 433 | 43 | 278 | 5.31e-47 | 163 |
| MsG0380013123.01.T01 | MTR_4g078660 | 48.201 | 139 | 66 | 2 | 172 | 304 | 24 | 162 | 3.94e-42 | 151 |
| MsG0380013123.01.T01 | MTR_2g090605 | 62.136 | 103 | 39 | 0 | 202 | 304 | 77 | 179 | 5.61e-42 | 153 |
| MsG0380013123.01.T01 | MTR_3g464290 | 63.542 | 96 | 34 | 1 | 181 | 275 | 79 | 174 | 2.87e-36 | 139 |
| MsG0380013123.01.T01 | MTR_3g464270 | 48.438 | 128 | 65 | 1 | 201 | 327 | 8 | 135 | 9.75e-36 | 135 |
| MsG0380013123.01.T02 | MTR_3g435590 | 80.752 | 452 | 34 | 1 | 1 | 399 | 18 | 469 | 0.0 | 742 |
| MsG0380013123.01.T02 | MTR_3g029590 | 56.129 | 465 | 87 | 7 | 1 | 348 | 31 | 495 | 2.66e-156 | 458 |
| MsG0380013123.01.T02 | MTR_3g029590 | 67.857 | 56 | 17 | 1 | 344 | 398 | 626 | 681 | 8.86e-16 | 79.7 |
| MsG0380013123.01.T02 | MTR_3g435680 | 55.882 | 408 | 93 | 10 | 63 | 399 | 5 | 396 | 2.73e-141 | 408 |
| MsG0380013123.01.T02 | MTR_7g092070 | 44.276 | 463 | 143 | 4 | 1 | 348 | 33 | 495 | 5.96e-116 | 354 |
| MsG0380013123.01.T02 | MTR_7g092070 | 45.333 | 75 | 40 | 1 | 325 | 398 | 601 | 675 | 7.39e-11 | 64.3 |
| MsG0380013123.01.T02 | MTR_5g082830 | 49.836 | 305 | 119 | 3 | 13 | 283 | 28 | 332 | 8.13e-98 | 306 |
| MsG0380013123.01.T02 | MTR_3g070880 | 49.438 | 267 | 135 | 0 | 13 | 279 | 8 | 274 | 5.36e-91 | 283 |
| MsG0380013123.01.T02 | MTR_1g075890 | 45.886 | 316 | 126 | 2 | 12 | 283 | 30 | 344 | 6.92e-87 | 277 |
| MsG0380013123.01.T02 | MTR_1g050438 | 37.778 | 450 | 172 | 7 | 1 | 342 | 1 | 450 | 5.65e-86 | 273 |
| MsG0380013123.01.T02 | MTR_5g071070 | 44.669 | 347 | 143 | 4 | 12 | 313 | 32 | 374 | 2.02e-85 | 274 |
| MsG0380013123.01.T02 | MTR_0728s0020 | 37.778 | 450 | 172 | 7 | 1 | 342 | 17 | 466 | 2.07e-85 | 272 |
| MsG0380013123.01.T02 | MTR_5g071070 | 45.734 | 293 | 116 | 2 | 63 | 313 | 1 | 292 | 2.23e-75 | 246 |
| MsG0380013123.01.T02 | MTR_3g464260 | 41.549 | 284 | 113 | 4 | 20 | 275 | 30 | 288 | 4.44e-61 | 206 |
| MsG0380013123.01.T02 | MTR_3g464280 | 37.363 | 273 | 119 | 2 | 17 | 271 | 19 | 257 | 1.58e-51 | 180 |
| MsG0380013123.01.T02 | MTR_8g102100 | 60.833 | 120 | 46 | 1 | 164 | 282 | 77 | 196 | 2.66e-48 | 169 |
| MsG0380013123.01.T02 | MTR_6g090380 | 65.421 | 107 | 37 | 0 | 164 | 270 | 99 | 205 | 7.00e-48 | 167 |
| MsG0380013123.01.T02 | MTR_3g103960 | 38.866 | 247 | 135 | 7 | 158 | 399 | 43 | 278 | 2.85e-47 | 163 |
| MsG0380013123.01.T02 | MTR_4g078660 | 48.201 | 139 | 66 | 2 | 138 | 270 | 24 | 162 | 3.84e-42 | 150 |
| MsG0380013123.01.T02 | MTR_2g090605 | 62.136 | 103 | 39 | 0 | 168 | 270 | 77 | 179 | 7.77e-42 | 152 |
| MsG0380013123.01.T02 | MTR_3g464290 | 63.542 | 96 | 34 | 1 | 147 | 241 | 79 | 174 | 2.17e-36 | 138 |
| MsG0380013123.01.T02 | MTR_3g464270 | 51.695 | 118 | 56 | 1 | 167 | 283 | 8 | 125 | 1.13e-35 | 134 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380013123.01.T03 | AT2G41900 | 55.882 | 374 | 145 | 5 | 1 | 360 | 34 | 401 | 1.72e-130 | 394 |
| MsG0380013123.01.T03 | AT5G12850 | 50.000 | 382 | 156 | 7 | 9 | 364 | 36 | 408 | 1.94e-116 | 357 |
| MsG0380013123.01.T03 | AT5G58620 | 45.427 | 328 | 162 | 3 | 12 | 336 | 11 | 324 | 6.01e-93 | 293 |
| MsG0380013123.01.T03 | AT3G55980 | 45.342 | 322 | 147 | 2 | 15 | 334 | 30 | 324 | 8.53e-93 | 292 |
| MsG0380013123.01.T03 | AT3G55980 | 45.342 | 322 | 147 | 2 | 15 | 334 | 97 | 391 | 5.00e-92 | 292 |
| MsG0380013123.01.T03 | AT2G40140 | 42.386 | 394 | 188 | 9 | 11 | 400 | 29 | 387 | 7.81e-92 | 290 |
| MsG0380013123.01.T03 | AT2G40140 | 42.386 | 394 | 188 | 9 | 11 | 400 | 29 | 387 | 7.81e-92 | 290 |
| MsG0380013123.01.T03 | AT5G07500 | 60.156 | 128 | 51 | 0 | 203 | 330 | 34 | 161 | 1.57e-51 | 174 |
| MsG0380013123.01.T03 | AT2G25900 | 63.551 | 107 | 39 | 0 | 217 | 323 | 86 | 192 | 6.18e-48 | 167 |
| MsG0380013123.01.T03 | AT2G25900 | 63.551 | 107 | 39 | 0 | 217 | 323 | 86 | 192 | 6.18e-48 | 167 |
| MsG0380013123.01.T03 | AT4G29190 | 56.391 | 133 | 57 | 1 | 195 | 327 | 54 | 185 | 1.42e-46 | 165 |
| MsG0380013123.01.T03 | AT2G19810 | 56.589 | 129 | 55 | 1 | 195 | 323 | 53 | 180 | 2.33e-45 | 162 |
| MsG0380013123.01.T03 | AT1G03790 | 53.521 | 142 | 58 | 3 | 199 | 336 | 64 | 201 | 1.54e-42 | 155 |
| MsG0380013123.01.T03 | AT5G44260 | 55.556 | 126 | 51 | 2 | 199 | 323 | 42 | 163 | 5.36e-41 | 150 |
| MsG0380013123.01.T01 | AT2G41900 | 55.200 | 375 | 127 | 4 | 1 | 341 | 34 | 401 | 1.75e-130 | 393 |
| MsG0380013123.01.T01 | AT5G12850 | 48.294 | 381 | 141 | 7 | 11 | 345 | 38 | 408 | 4.32e-115 | 353 |
| MsG0380013123.01.T01 | AT3G55980 | 48.185 | 303 | 147 | 2 | 15 | 315 | 30 | 324 | 5.18e-97 | 302 |
| MsG0380013123.01.T01 | AT3G55980 | 48.185 | 303 | 147 | 2 | 15 | 315 | 97 | 391 | 2.93e-96 | 302 |
| MsG0380013123.01.T01 | AT2G40140 | 44.533 | 375 | 188 | 8 | 11 | 381 | 29 | 387 | 1.89e-95 | 299 |
| MsG0380013123.01.T01 | AT2G40140 | 44.533 | 375 | 188 | 8 | 11 | 381 | 29 | 387 | 1.89e-95 | 299 |
| MsG0380013123.01.T01 | AT5G58620 | 43.099 | 355 | 183 | 5 | 12 | 348 | 11 | 364 | 5.45e-95 | 298 |
| MsG0380013123.01.T01 | AT5G07500 | 60.156 | 128 | 51 | 0 | 184 | 311 | 34 | 161 | 1.05e-51 | 174 |
| MsG0380013123.01.T01 | AT2G25900 | 63.551 | 107 | 39 | 0 | 198 | 304 | 86 | 192 | 3.29e-48 | 167 |
| MsG0380013123.01.T01 | AT2G25900 | 63.551 | 107 | 39 | 0 | 198 | 304 | 86 | 192 | 3.29e-48 | 167 |
| MsG0380013123.01.T01 | AT4G29190 | 57.364 | 129 | 54 | 1 | 176 | 304 | 54 | 181 | 7.40e-47 | 165 |
| MsG0380013123.01.T01 | AT2G19810 | 56.589 | 129 | 55 | 1 | 176 | 304 | 53 | 180 | 1.31e-45 | 162 |
| MsG0380013123.01.T01 | AT1G03790 | 49.091 | 165 | 70 | 4 | 180 | 334 | 64 | 224 | 8.95e-43 | 155 |
| MsG0380013123.01.T01 | AT5G44260 | 55.556 | 126 | 51 | 2 | 180 | 304 | 42 | 163 | 4.97e-41 | 150 |
| MsG0380013123.01.T02 | AT2G41900 | 49.728 | 368 | 124 | 6 | 1 | 307 | 34 | 401 | 3.25e-107 | 331 |
| MsG0380013123.01.T02 | AT3G55980 | 48.475 | 295 | 124 | 2 | 15 | 281 | 30 | 324 | 9.03e-93 | 290 |
| MsG0380013123.01.T02 | AT2G40140 | 43.869 | 367 | 168 | 7 | 11 | 347 | 29 | 387 | 3.13e-92 | 289 |
| MsG0380013123.01.T02 | AT2G40140 | 43.869 | 367 | 168 | 7 | 11 | 347 | 29 | 387 | 3.13e-92 | 289 |
| MsG0380013123.01.T02 | AT3G55980 | 48.475 | 295 | 124 | 2 | 15 | 281 | 97 | 391 | 5.77e-92 | 290 |
| MsG0380013123.01.T02 | AT5G58620 | 41.690 | 355 | 154 | 5 | 12 | 314 | 11 | 364 | 3.35e-89 | 281 |
| MsG0380013123.01.T02 | AT5G12850 | 40.374 | 374 | 147 | 8 | 11 | 311 | 38 | 408 | 1.91e-79 | 258 |
| MsG0380013123.01.T02 | AT5G07500 | 60.156 | 128 | 51 | 0 | 150 | 277 | 34 | 161 | 1.09e-51 | 173 |
| MsG0380013123.01.T02 | AT2G25900 | 63.551 | 107 | 39 | 0 | 164 | 270 | 86 | 192 | 5.42e-48 | 166 |
| MsG0380013123.01.T02 | AT2G25900 | 63.551 | 107 | 39 | 0 | 164 | 270 | 86 | 192 | 5.42e-48 | 166 |
| MsG0380013123.01.T02 | AT4G29190 | 57.364 | 129 | 54 | 1 | 142 | 270 | 54 | 181 | 1.17e-46 | 164 |
| MsG0380013123.01.T02 | AT2G19810 | 56.589 | 129 | 55 | 1 | 142 | 270 | 53 | 180 | 1.96e-45 | 160 |
| MsG0380013123.01.T02 | AT1G03790 | 49.091 | 165 | 70 | 4 | 146 | 300 | 64 | 224 | 1.20e-42 | 154 |
| MsG0380013123.01.T02 | AT5G44260 | 55.556 | 126 | 51 | 2 | 146 | 270 | 42 | 163 | 6.27e-41 | 149 |
Find 103 sgRNAs with CRISPR-Local
Find 112 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAGCTGTAGGTGAACTTTCT+AGG | 0.217092 | 3:+30852743 | None:intergenic |
| ACCAAAGTCATTTCCATTTA+CGG | 0.262627 | 3:+30852259 | None:intergenic |
| AAACCTGATTGGTCCGTAAA+TGG | 0.274186 | 3:-30852272 | MsG0380013123.01.T03:CDS |
| GAACAATTTAAGGTAGCTTT+AGG | 0.281412 | 3:-30853439 | MsG0380013123.01.T03:CDS |
| CAATTCCTATTTCTAAAATC+AGG | 0.292610 | 3:+30852710 | None:intergenic |
| TTCTCTTGAGGATGGTAAAA+AGG | 0.301619 | 3:+30852782 | None:intergenic |
| TTCTGTCCTCGAGAACAATT+TGG | 0.311928 | 3:+30853356 | None:intergenic |
| TATATGCTGTTTCGTATATC+AGG | 0.367270 | 3:+30852884 | None:intergenic |
| TATCTTAGTTGACAAGAGAT+TGG | 0.368449 | 3:+30852171 | None:intergenic |
| CGAGGACAGAACCGCTTTGA+TGG | 0.377143 | 3:-30853344 | MsG0380013123.01.T03:CDS |
| TATGCAAATGGCCTCTTTGA+TGG | 0.380891 | 3:-30852404 | MsG0380013123.01.T03:CDS |
| TCAGGAATTGATGGATCAAT+TGG | 0.382999 | 3:+30852902 | None:intergenic |
| CTGTTTCTCACAGCCCCGTC+CGG | 0.385820 | 3:-30852354 | MsG0380013123.01.T03:CDS |
| AGATGAATTTCGCATGTATT+CGG | 0.386064 | 3:-30852855 | MsG0380013123.01.T03:CDS |
| TCTATTGTGTGGACGCTAAT+GGG | 0.387168 | 3:-30853147 | MsG0380013123.01.T03:CDS |
| TCCGCTGTCATCGTGTGAAA+AGG | 0.389604 | 3:-30852999 | MsG0380013123.01.T03:CDS |
| AGCAGATGCAGCTGATCTAA+TGG | 0.394681 | 3:+30852529 | None:intergenic |
| GATTGGACCCAAGATATATC+AGG | 0.394954 | 3:+30852188 | None:intergenic |
| ATCTATTGTGTGGACGCTAA+TGG | 0.395128 | 3:-30853148 | MsG0380013123.01.T03:CDS |
| TTGAAGAGCCTGATATATCT+TGG | 0.396118 | 3:-30852196 | MsG0380013123.01.T03:CDS |
| TTCACGACTTCGAGCTTATG+AGG | 0.397514 | 3:+30853085 | None:intergenic |
| GCCTGGTGTGTCCGTCAAAA+TGG | 0.397875 | 3:-30853385 | MsG0380013123.01.T03:CDS |
| CCGCTGTCATCGTGTGAAAA+GGG | 0.399012 | 3:-30852998 | MsG0380013123.01.T03:CDS |
| TTTCCATTTACGGACCAATC+AGG | 0.419002 | 3:+30852269 | None:intergenic |
| CACTGAAATGGTACCCGGAC+GGG | 0.432326 | 3:+30852340 | None:intergenic |
| TCTAAGTGGGGATCTCATAC+TGG | 0.434509 | 3:-30852296 | MsG0380013123.01.T03:CDS |
| ATACTTTCATCTTCAGAGGC+TGG | 0.450932 | 3:-30853283 | MsG0380013123.01.T03:CDS |
| TTTCGTATATCAGGAATTGA+TGG | 0.454148 | 3:+30852893 | None:intergenic |
| CTCATACTGGTAAACCTGAT+TGG | 0.455830 | 3:-30852283 | MsG0380013123.01.T03:CDS |
| GCAGCCATGTCCATGACAAT+AGG | 0.459445 | 3:+30852506 | None:intergenic |
| GCTGATGAGTCTGTTGATGA+TGG | 0.472701 | 3:-30853028 | MsG0380013123.01.T03:CDS |
| GTAAAACTGCTTATATCAGC+TGG | 0.475402 | 3:-30853178 | MsG0380013123.01.T03:CDS |
| AGCTTATGAGGAACAACAAT+CGG | 0.476457 | 3:+30853097 | None:intergenic |
| ATCGTGCATACACTCATGAT+TGG | 0.479539 | 3:-30852814 | MsG0380013123.01.T03:CDS |
| AGATACAAAGGCTGTGCAAA+AGG | 0.480808 | 3:+30852428 | None:intergenic |
| AACAGACCGACTCACTGAAA+TGG | 0.484349 | 3:+30852328 | None:intergenic |
| ATTGTTTCCATGCTGAAAAG+AGG | 0.484399 | 3:+30852220 | None:intergenic |
| AGGCTTGTGCGATACTGATC+TGG | 0.489915 | 3:+30852632 | None:intergenic |
| CTCCTTCGTGCATTCTCTTG+AGG | 0.491168 | 3:+30852770 | None:intergenic |
| CGCACAAGCCTTTGCAAAGA+GGG | 0.495365 | 3:-30852620 | MsG0380013123.01.T03:CDS |
| ACAGCTGTGTCGGTAAACTT+TGG | 0.503937 | 3:+30852953 | None:intergenic |
| AGAAGCATGTTCAAGTAAGC+TGG | 0.506422 | 3:+30853474 | None:intergenic |
| CCTTTGTATCTATATGCAAA+TGG | 0.509335 | 3:-30852416 | MsG0380013123.01.T03:CDS |
| GGAAGAATAATAACATTCAC+TGG | 0.510849 | 3:+30853118 | None:intergenic |
| TCCGTAAATGGAAATGACTT+TGG | 0.511355 | 3:-30852260 | MsG0380013123.01.T03:CDS |
| CTGTGCTGCTTCGAGTGGTA+CGG | 0.514258 | 3:-30853218 | MsG0380013123.01.T03:CDS |
| TGTTAACTCCTCGTCTAAGT+GGG | 0.516543 | 3:-30852309 | MsG0380013123.01.T03:CDS |
| TGTTTCTCACAGCCCCGTCC+GGG | 0.517747 | 3:-30852353 | MsG0380013123.01.T03:CDS |
| TGAAGAGCCTGATATATCTT+GGG | 0.518053 | 3:-30852195 | MsG0380013123.01.T03:CDS |
| AATTCCTATTTCTAAAATCA+GGG | 0.524886 | 3:+30852711 | None:intergenic |
| GAAATAGGAATTGCAGACGC+GGG | 0.527252 | 3:-30852700 | MsG0380013123.01.T03:CDS |
| TTTGGAGCCACAGGAGAGGA+TGG | 0.530352 | 3:+30852971 | None:intergenic |
| CTGTTAACTCCTCGTCTAAG+TGG | 0.534143 | 3:-30852310 | MsG0380013123.01.T03:CDS |
| ACTGAAATGGTACCCGGACG+GGG | 0.536002 | 3:+30852341 | None:intergenic |
| CTCATGGAGTATTCGAGACC+TGG | 0.539512 | 3:-30852661 | MsG0380013123.01.T03:CDS |
| AGCTGTAGGTGAACTTTCTA+GGG | 0.540690 | 3:+30852744 | None:intergenic |
| TCGGTAAACTTTGGAGCCAC+AGG | 0.542025 | 3:+30852962 | None:intergenic |
| AACTAGTACCCTCTTTGCAA+AGG | 0.543250 | 3:+30852612 | None:intergenic |
| GCTTATACTTTCATCTTCAG+AGG | 0.545789 | 3:-30853287 | MsG0380013123.01.T03:CDS |
| TAGAATATCAATACTCCCAC+AGG | 0.547853 | 3:+30853312 | None:intergenic |
| TGCTCCTATTGTCATGGACA+TGG | 0.553647 | 3:-30852510 | MsG0380013123.01.T03:CDS |
| CGCTGTCATCGTGTGAAAAG+GGG | 0.555009 | 3:-30852997 | MsG0380013123.01.T03:CDS |
| ATACTGATCTGGATGTAGCC+AGG | 0.556939 | 3:+30852643 | None:intergenic |
| TTCGTGCATTCTCTTGAGGA+TGG | 0.557083 | 3:+30852774 | None:intergenic |
| AAAGGCTGTGCAAAAGGTGA+TGG | 0.567762 | 3:+30852434 | None:intergenic |
| CGGGTACCATTTCAGTGAGT+CGG | 0.574233 | 3:-30852334 | MsG0380013123.01.T03:CDS |
| TGCATCTGCTCCTATTGTCA+TGG | 0.581920 | 3:-30852516 | MsG0380013123.01.T03:CDS |
| TGTTACATGAAGTTGGCGCC+TGG | 0.582164 | 3:-30853402 | MsG0380013123.01.T03:CDS |
| CTATTTCTAAAATCAGGGCA+TGG | 0.583052 | 3:+30852716 | None:intergenic |
| TTGATGGTGGCAGCATCCTG+TGG | 0.583783 | 3:-30853328 | MsG0380013123.01.T03:CDS |
| AGCAGCACAGTGAAGAGCAG+TGG | 0.584568 | 3:+30853231 | None:intergenic |
| AGGGCATGGCACACAGCTGT+AGG | 0.585274 | 3:+30852730 | None:intergenic |
| ATTTCGCATGTATTCGGTCA+AGG | 0.587008 | 3:-30852849 | MsG0380013123.01.T03:CDS |
| GCCTCGCTGTTACATGAAGT+TGG | 0.589446 | 3:-30853409 | MsG0380013123.01.T03:CDS |
| TGATGGTGGCAGCATCCTGT+GGG | 0.591002 | 3:-30853327 | MsG0380013123.01.T03:CDS |
| GGGGTCTCCATCCTCTCCTG+TGG | 0.592440 | 3:-30852978 | MsG0380013123.01.T03:CDS |
| GATCTAATGGAAGCATGCGA+TGG | 0.592544 | 3:+30852542 | None:intergenic |
| CGACTCACTGAAATGGTACC+CGG | 0.592848 | 3:+30852335 | None:intergenic |
| GATATGTGTGAATATGCTCA+TGG | 0.598080 | 3:-30852677 | MsG0380013123.01.T03:CDS |
| GCTGCAACGAGCCTTTGTCG+TGG | 0.600822 | 3:-30852485 | MsG0380013123.01.T03:CDS |
| CCATTTGCATATAGATACAA+AGG | 0.602439 | 3:+30852416 | None:intergenic |
| TGCATACACTCATGATTGGA+CGG | 0.607703 | 3:-30852810 | MsG0380013123.01.T03:CDS |
| GAATAATAACATTCACTGGA+CGG | 0.617030 | 3:+30853122 | None:intergenic |
| TCACTGAAATGGTACCCGGA+CGG | 0.621764 | 3:+30852339 | None:intergenic |
| GGACAGAACCGCTTTGATGG+TGG | 0.626702 | 3:-30853341 | MsG0380013123.01.T03:CDS |
| TTCAGAACTAACAGCTGTGT+CGG | 0.628333 | 3:+30852943 | None:intergenic |
| CTTCACTGTGCTGCTTCGAG+TGG | 0.634753 | 3:-30853223 | MsG0380013123.01.T03:CDS |
| GGGTACTAGTTGTAACCGAA+AGG | 0.639928 | 3:-30852600 | MsG0380013123.01.T03:CDS |
| TTGATAGTGAACCACGACAA+AGG | 0.649293 | 3:+30852474 | None:intergenic |
| TGTATGCACGATGACAAAGA+AGG | 0.653054 | 3:+30852825 | None:intergenic |
| ACATAACCAAATTGTTCTCG+AGG | 0.657807 | 3:-30853362 | MsG0380013123.01.T03:CDS |
| TCGCACAAGCCTTTGCAAAG+AGG | 0.659587 | 3:-30852621 | MsG0380013123.01.T03:CDS |
| AAACTTTGGAGCCACAGGAG+AGG | 0.663839 | 3:+30852967 | None:intergenic |
| GTTAACTCCTCGTCTAAGTG+GGG | 0.664476 | 3:-30852308 | MsG0380013123.01.T03:CDS |
| AAATAGGAATTGCAGACGCG+GGG | 0.674949 | 3:-30852699 | MsG0380013123.01.T03:CDS |
| AGAAATAGGAATTGCAGACG+CGG | 0.678930 | 3:-30852701 | MsG0380013123.01.T03:CDS |
| TGTGCTGCTGACCATCAAAG+AGG | 0.681128 | 3:+30852393 | None:intergenic |
| ATACATGCGAAATTCATCTG+TGG | 0.693580 | 3:+30852859 | None:intergenic |
| TGGCGCTGACATCTATTGTG+TGG | 0.706581 | 3:-30853158 | MsG0380013123.01.T03:CDS |
| ATGAGATCCCCACTTAGACG+AGG | 0.708111 | 3:+30852301 | None:intergenic |
| GGATGCTGCCACCATCAAAG+CGG | 0.735185 | 3:+30853333 | None:intergenic |
| ATCCTCAAGAGAATGCACGA+AGG | 0.738867 | 3:-30852772 | MsG0380013123.01.T03:CDS |
| GCCAACTTCATGTAACAGCG+AGG | 0.747623 | 3:+30853408 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATTCCTATTTCTAAAATCA+GGG | + | Chr3:30852978-30852997 | None:intergenic | 20.0% |
| !!! | ATTGGATATTTTTTCTTTTC+TGG | + | Chr3:30852769-30852788 | None:intergenic | 20.0% |
| !!! | GAATGATTTTGAACAATTTA+AGG | - | Chr3:30852237-30852256 | MsG0380013123.01.T03:CDS | 20.0% |
| !!! | CAATTCCTATTTCTAAAATC+AGG | + | Chr3:30852979-30852998 | None:intergenic | 25.0% |
| ACCAAAGTCATTTCCATTTA+CGG | + | Chr3:30853430-30853449 | None:intergenic | 30.0% | |
| AGATGAATTTCGCATGTATT+CGG | - | Chr3:30852831-30852850 | MsG0380013123.01.T03:CDS | 30.0% | |
| CCATTTGCATATAGATACAA+AGG | + | Chr3:30853273-30853292 | None:intergenic | 30.0% | |
| CCTTTGTATCTATATGCAAA+TGG | - | Chr3:30853270-30853289 | MsG0380013123.01.T03:CDS | 30.0% | |
| GAATAATAACATTCACTGGA+CGG | + | Chr3:30852567-30852586 | None:intergenic | 30.0% | |
| GGAAGAATAATAACATTCAC+TGG | + | Chr3:30852571-30852590 | None:intergenic | 30.0% | |
| TTTCGTATATCAGGAATTGA+TGG | + | Chr3:30852796-30852815 | None:intergenic | 30.0% | |
| ! | CTGGAGTAAATTTTTCTTGT+GGG | - | Chr3:30852422-30852441 | MsG0380013123.01.T03:CDS | 30.0% |
| ! | GAACAATTTAAGGTAGCTTT+AGG | - | Chr3:30852247-30852266 | MsG0380013123.01.T03:CDS | 30.0% |
| ! | TTTGGTTATGTCCATTTTGA+CGG | + | Chr3:30852315-30852334 | None:intergenic | 30.0% |
| !! | TATATGCTGTTTCGTATATC+AGG | + | Chr3:30852805-30852824 | None:intergenic | 30.0% |
| ACATAACCAAATTGTTCTCG+AGG | - | Chr3:30852324-30852343 | MsG0380013123.01.T03:CDS | 35.0% | |
| AGCTTATGAGGAACAACAAT+CGG | + | Chr3:30852592-30852611 | None:intergenic | 35.0% | |
| ATACATGCGAAATTCATCTG+TGG | + | Chr3:30852830-30852849 | None:intergenic | 35.0% | |
| ATTGTTTCCATGCTGAAAAG+AGG | + | Chr3:30853469-30853488 | None:intergenic | 35.0% | |
| GATATGTGTGAATATGCTCA+TGG | - | Chr3:30853009-30853028 | MsG0380013123.01.T03:CDS | 35.0% | |
| GCTTATACTTTCATCTTCAG+AGG | - | Chr3:30852399-30852418 | MsG0380013123.01.T03:CDS | 35.0% | |
| GTAAAACTGCTTATATCAGC+TGG | - | Chr3:30852508-30852527 | MsG0380013123.01.T03:CDS | 35.0% | |
| TAGAATATCAATACTCCCAC+AGG | + | Chr3:30852377-30852396 | None:intergenic | 35.0% | |
| TCCGTAAATGGAAATGACTT+TGG | - | Chr3:30853426-30853445 | MsG0380013123.01.T03:CDS | 35.0% | |
| TGAAGAGCCTGATATATCTT+GGG | - | Chr3:30853491-30853510 | MsG0380013123.01.T03:CDS | 35.0% | |
| TTCTCTTGAGGATGGTAAAA+AGG | + | Chr3:30852907-30852926 | None:intergenic | 35.0% | |
| TTGAAGAGCCTGATATATCT+TGG | - | Chr3:30853490-30853509 | MsG0380013123.01.T03:CDS | 35.0% | |
| ! | AGATATACCTCTTTTCAGCA+TGG | - | Chr3:30853459-30853478 | MsG0380013123.01.T03:CDS | 35.0% |
| ! | GCTGGAGTAAATTTTTCTTG+TGG | - | Chr3:30852421-30852440 | MsG0380013123.01.T03:CDS | 35.0% |
| ! | TCAGGAATTGATGGATCAAT+TGG | + | Chr3:30852787-30852806 | None:intergenic | 35.0% |
| !! | CATGCCCTGATTTTAGAAAT+AGG | - | Chr3:30852971-30852990 | MsG0380013123.01.T03:CDS | 35.0% |
| !! | CTATTTCTAAAATCAGGGCA+TGG | + | Chr3:30852973-30852992 | None:intergenic | 35.0% |
| AACTAGTACCCTCTTTGCAA+AGG | + | Chr3:30853077-30853096 | None:intergenic | 40.0% | |
| AGAAATAGGAATTGCAGACG+CGG | - | Chr3:30852985-30853004 | MsG0380013123.01.T03:CDS | 40.0% | |
| AGATACAAAGGCTGTGCAAA+AGG | + | Chr3:30853261-30853280 | None:intergenic | 40.0% | |
| AGCTGTAGGTGAACTTTCTA+GGG | + | Chr3:30852945-30852964 | None:intergenic | 40.0% | |
| ATACTTTCATCTTCAGAGGC+TGG | - | Chr3:30852403-30852422 | MsG0380013123.01.T03:CDS | 40.0% | |
| ATCGTGCATACACTCATGAT+TGG | - | Chr3:30852872-30852891 | MsG0380013123.01.T03:CDS | 40.0% | |
| ATCTATTGTGTGGACGCTAA+TGG | - | Chr3:30852538-30852557 | MsG0380013123.01.T03:CDS | 40.0% | |
| ATTTCGCATGTATTCGGTCA+AGG | - | Chr3:30852837-30852856 | MsG0380013123.01.T03:CDS | 40.0% | |
| CTCATACTGGTAAACCTGAT+TGG | - | Chr3:30853403-30853422 | MsG0380013123.01.T03:CDS | 40.0% | |
| GATTGGACCCAAGATATATC+AGG | + | Chr3:30853501-30853520 | None:intergenic | 40.0% | |
| TATGCAAATGGCCTCTTTGA+TGG | - | Chr3:30853282-30853301 | MsG0380013123.01.T03:CDS | 40.0% | |
| TCTATTGTGTGGACGCTAAT+GGG | - | Chr3:30852539-30852558 | MsG0380013123.01.T03:CDS | 40.0% | |
| TGCATACACTCATGATTGGA+CGG | - | Chr3:30852876-30852895 | MsG0380013123.01.T03:CDS | 40.0% | |
| TGTATGCACGATGACAAAGA+AGG | + | Chr3:30852864-30852883 | None:intergenic | 40.0% | |
| TGTTAACTCCTCGTCTAAGT+GGG | - | Chr3:30853377-30853396 | MsG0380013123.01.T03:CDS | 40.0% | |
| TTCAGAACTAACAGCTGTGT+CGG | + | Chr3:30852746-30852765 | None:intergenic | 40.0% | |
| TTCTGTCCTCGAGAACAATT+TGG | + | Chr3:30852333-30852352 | None:intergenic | 40.0% | |
| TTTCCATTTACGGACCAATC+AGG | + | Chr3:30853420-30853439 | None:intergenic | 40.0% | |
| ! | AAACCTGATTGGTCCGTAAA+TGG | - | Chr3:30853414-30853433 | MsG0380013123.01.T03:CDS | 40.0% |
| ! | AGAAGCATGTTCAAGTAAGC+TGG | + | Chr3:30852215-30852234 | None:intergenic | 40.0% |
| ! | GTGCAAAAAAGCACACCTTT+CGG | + | Chr3:30853104-30853123 | None:intergenic | 40.0% |
| !! | TTGATAGTGAACCACGACAA+AGG | + | Chr3:30853215-30853234 | None:intergenic | 40.0% |
| AAAGGCTGTGCAAAAGGTGA+TGG | + | Chr3:30853255-30853274 | None:intergenic | 45.0% | |
| AAATAGGAATTGCAGACGCG+GGG | - | Chr3:30852987-30853006 | MsG0380013123.01.T03:CDS | 45.0% | |
| AGCAGATGCAGCTGATCTAA+TGG | + | Chr3:30853160-30853179 | None:intergenic | 45.0% | |
| ATACTGATCTGGATGTAGCC+AGG | + | Chr3:30853046-30853065 | None:intergenic | 45.0% | |
| ATCCTCAAGAGAATGCACGA+AGG | - | Chr3:30852914-30852933 | MsG0380013123.01.T03:CDS | 45.0% | |
| CAGCTGTAGGTGAACTTTCT+AGG | + | Chr3:30852946-30852965 | None:intergenic | 45.0% | |
| CTGTTAACTCCTCGTCTAAG+TGG | - | Chr3:30853376-30853395 | MsG0380013123.01.T03:CDS | 45.0% | |
| GAAATAGGAATTGCAGACGC+GGG | - | Chr3:30852986-30853005 | MsG0380013123.01.T03:CDS | 45.0% | |
| GGGTACTAGTTGTAACCGAA+AGG | - | Chr3:30853086-30853105 | MsG0380013123.01.T03:CDS | 45.0% | |
| GTTAACTCCTCGTCTAAGTG+GGG | - | Chr3:30853378-30853397 | MsG0380013123.01.T03:CDS | 45.0% | |
| TCTAAGTGGGGATCTCATAC+TGG | - | Chr3:30853390-30853409 | MsG0380013123.01.T03:CDS | 45.0% | |
| TGCATCTGCTCCTATTGTCA+TGG | - | Chr3:30853170-30853189 | MsG0380013123.01.T03:CDS | 45.0% | |
| TGCTCCTATTGTCATGGACA+TGG | - | Chr3:30853176-30853195 | MsG0380013123.01.T03:CDS | 45.0% | |
| TTCACGACTTCGAGCTTATG+AGG | + | Chr3:30852604-30852623 | None:intergenic | 45.0% | |
| TTCGTGCATTCTCTTGAGGA+TGG | + | Chr3:30852915-30852934 | None:intergenic | 45.0% | |
| ! | AACAGACCGACTCACTGAAA+TGG | + | Chr3:30853361-30853380 | None:intergenic | 45.0% |
| ! | ACAGCTGTGTCGGTAAACTT+TGG | + | Chr3:30852736-30852755 | None:intergenic | 45.0% |
| ! | GATCTAATGGAAGCATGCGA+TGG | + | Chr3:30853147-30853166 | None:intergenic | 45.0% |
| ! | GCTGATGAGTCTGTTGATGA+TGG | - | Chr3:30852658-30852677 | MsG0380013123.01.T03:CDS | 45.0% |
| AGGCTTGTGCGATACTGATC+TGG | + | Chr3:30853057-30853076 | None:intergenic | 50.0% | |
| ATGAGATCCCCACTTAGACG+AGG | + | Chr3:30853388-30853407 | None:intergenic | 50.0% | |
| CCGCTGTCATCGTGTGAAAA+GGG | - | Chr3:30852688-30852707 | MsG0380013123.01.T03:CDS | 50.0% | |
| CGACTCACTGAAATGGTACC+CGG | + | Chr3:30853354-30853373 | None:intergenic | 50.0% | |
| CGCACAAGCCTTTGCAAAGA+GGG | - | Chr3:30853066-30853085 | MsG0380013123.01.T03:CDS | 50.0% | |
| CGCTGTCATCGTGTGAAAAG+GGG | - | Chr3:30852689-30852708 | MsG0380013123.01.T03:CDS | 50.0% | |
| CGGGTACCATTTCAGTGAGT+CGG | - | Chr3:30853352-30853371 | MsG0380013123.01.T03:CDS | 50.0% | |
| CTCCTTCGTGCATTCTCTTG+AGG | + | Chr3:30852919-30852938 | None:intergenic | 50.0% | |
| GCAGCCATGTCCATGACAAT+AGG | + | Chr3:30853183-30853202 | None:intergenic | 50.0% | |
| GCCAACTTCATGTAACAGCG+AGG | + | Chr3:30852281-30852300 | None:intergenic | 50.0% | |
| GCCTCGCTGTTACATGAAGT+TGG | - | Chr3:30852277-30852296 | MsG0380013123.01.T03:CDS | 50.0% | |
| TCACTGAAATGGTACCCGGA+CGG | + | Chr3:30853350-30853369 | None:intergenic | 50.0% | |
| TCCGCTGTCATCGTGTGAAA+AGG | - | Chr3:30852687-30852706 | MsG0380013123.01.T03:CDS | 50.0% | |
| TCGCACAAGCCTTTGCAAAG+AGG | - | Chr3:30853065-30853084 | MsG0380013123.01.T03:CDS | 50.0% | |
| TGTTACATGAAGTTGGCGCC+TGG | - | Chr3:30852284-30852303 | MsG0380013123.01.T03:CDS | 50.0% | |
| ! | CCCTTTTCACACGATGACAG+CGG | + | Chr3:30852691-30852710 | None:intergenic | 50.0% |
| ! | CTCATGGAGTATTCGAGACC+TGG | - | Chr3:30853025-30853044 | MsG0380013123.01.T03:CDS | 50.0% |
| ! | TGTGCTGCTGACCATCAAAG+AGG | + | Chr3:30853296-30853315 | None:intergenic | 50.0% |
| !! | AAACTTTGGAGCCACAGGAG+AGG | + | Chr3:30852722-30852741 | None:intergenic | 50.0% |
| !! | TCCATTTTGACGGACACACC+AGG | + | Chr3:30852305-30852324 | None:intergenic | 50.0% |
| !! | TCGGTAAACTTTGGAGCCAC+AGG | + | Chr3:30852727-30852746 | None:intergenic | 50.0% |
| !! | TGGCGCTGACATCTATTGTG+TGG | - | Chr3:30852528-30852547 | MsG0380013123.01.T03:CDS | 50.0% |
| ACTGAAATGGTACCCGGACG+GGG | + | Chr3:30853348-30853367 | None:intergenic | 55.0% | |
| AGCAGCACAGTGAAGAGCAG+TGG | + | Chr3:30852458-30852477 | None:intergenic | 55.0% | |
| CACTGAAATGGTACCCGGAC+GGG | + | Chr3:30853349-30853368 | None:intergenic | 55.0% | |
| CGAGGACAGAACCGCTTTGA+TGG | - | Chr3:30852342-30852361 | MsG0380013123.01.T03:CDS | 55.0% | |
| GCCTGGTGTGTCCGTCAAAA+TGG | - | Chr3:30852301-30852320 | MsG0380013123.01.T03:CDS | 55.0% | |
| GGACAGAACCGCTTTGATGG+TGG | - | Chr3:30852345-30852364 | MsG0380013123.01.T03:CDS | 55.0% | |
| GGATGCTGCCACCATCAAAG+CGG | + | Chr3:30852356-30852375 | None:intergenic | 55.0% | |
| ! | TTTGGAGCCACAGGAGAGGA+TGG | + | Chr3:30852718-30852737 | None:intergenic | 55.0% |
| !! | CTGTGCTGCTTCGAGTGGTA+CGG | - | Chr3:30852468-30852487 | MsG0380013123.01.T03:CDS | 55.0% |
| !! | CTTCACTGTGCTGCTTCGAG+TGG | - | Chr3:30852463-30852482 | MsG0380013123.01.T03:CDS | 55.0% |
| !! | TGATGGTGGCAGCATCCTGT+GGG | - | Chr3:30852359-30852378 | MsG0380013123.01.T03:CDS | 55.0% |
| !! | TTGATGGTGGCAGCATCCTG+TGG | - | Chr3:30852358-30852377 | MsG0380013123.01.T03:CDS | 55.0% |
| AGGGCATGGCACACAGCTGT+AGG | + | Chr3:30852959-30852978 | None:intergenic | 60.0% | |
| GCTGCAACGAGCCTTTGTCG+TGG | - | Chr3:30853201-30853220 | MsG0380013123.01.T03:CDS | 60.0% | |
| TGTTTCTCACAGCCCCGTCC+GGG | - | Chr3:30853333-30853352 | MsG0380013123.01.T03:CDS | 60.0% | |
| ! | CTGTTTCTCACAGCCCCGTC+CGG | - | Chr3:30853332-30853351 | MsG0380013123.01.T03:CDS | 60.0% |
| GGGGTCTCCATCCTCTCCTG+TGG | - | Chr3:30852708-30852727 | MsG0380013123.01.T03:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr3 | gene | 30852175 | 30853533 | 30852175 | ID=MsG0380013123.01;Name=MsG0380013123.01 |
| Chr3 | mRNA | 30852175 | 30853533 | 30852175 | ID=MsG0380013123.01.T01;Parent=MsG0380013123.01;Name=MsG0380013123.01.T01;_AED=0.08;_eAED=0.08;_QI=0|0|0|1|0|0|2|0|433 |
| Chr3 | exon | 30853029 | 30853533 | 30853029 | ID=MsG0380013123.01.T01:exon:6484;Parent=MsG0380013123.01.T01 |
| Chr3 | exon | 30852175 | 30852971 | 30852175 | ID=MsG0380013123.01.T01:exon:6485;Parent=MsG0380013123.01.T01 |
| Chr3 | CDS | 30853029 | 30853533 | 30853029 | ID=MsG0380013123.01.T01:cds;Parent=MsG0380013123.01.T01 |
| Chr3 | CDS | 30852175 | 30852971 | 30852175 | ID=MsG0380013123.01.T01:cds;Parent=MsG0380013123.01.T01 |
| Chr3 | mRNA | 30852175 | 30853533 | 30852175 | ID=MsG0380013123.01.T02;Parent=MsG0380013123.01;Name=MsG0380013123.01.T02;_AED=0.11;_eAED=0.11;_QI=0|0|0|1|0|0|2|0|399 |
| Chr3 | exon | 30853138 | 30853533 | 30853138 | ID=MsG0380013123.01.T02:exon:6486;Parent=MsG0380013123.01.T02 |
| Chr3 | exon | 30852175 | 30852978 | 30852175 | ID=MsG0380013123.01.T02:exon:6487;Parent=MsG0380013123.01.T02 |
| Chr3 | CDS | 30853138 | 30853533 | 30853138 | ID=MsG0380013123.01.T02:cds;Parent=MsG0380013123.01.T02 |
| Chr3 | CDS | 30852175 | 30852978 | 30852175 | ID=MsG0380013123.01.T02:cds;Parent=MsG0380013123.01.T02 |
| Chr3 | mRNA | 30852175 | 30853533 | 30852175 | ID=MsG0380013123.01.T03;Parent=MsG0380013123.01;Name=MsG0380013123.01.T03;_AED=0.06;_eAED=0.06;_QI=0|-1|0|1|-1|0|1|0|452 |
| Chr3 | exon | 30852175 | 30853533 | 30852175 | ID=MsG0380013123.01.T03:exon:6488;Parent=MsG0380013123.01.T03 |
| Chr3 | CDS | 30852175 | 30853533 | 30852175 | ID=MsG0380013123.01.T03:cds;Parent=MsG0380013123.01.T03 |
| Chr3 | mRNA | 30852387 | 30853046 | 30852387 | ID=MsG0380013123.01.T04;Parent=MsG0380013123.01;Name=MsG0380013123.01.T04;_AED=0.29;_eAED=1.00;_QI=0|-1|0|1|-1|0|1|0|219 |
| Chr3 | exon | 30852387 | 30853046 | 30852387 | ID=MsG0380013123.01.T04:exon:6489;Parent=MsG0380013123.01.T04 |
| Chr3 | CDS | 30852387 | 30853046 | 30852387 | ID=MsG0380013123.01.T04:cds;Parent=MsG0380013123.01.T04 |
| Gene Sequence |
| Protein sequence |
