AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0380014629.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380014629.01.T01 MTR_3g461490 86.769 325 5 1 1 287 1 325 0.0 579
MsG0380014629.01.T01 MTR_6g009430 56.970 165 71 0 1 165 1 165 5.13e-66 209
MsG0380014629.01.T01 MTR_4g091490 71.318 129 36 1 1 128 1 129 8.07e-66 210
MsG0380014629.01.T01 MTR_2g011660 69.767 129 38 1 1 128 1 129 2.01e-64 206
MsG0380014629.01.T01 MTR_6g012690 48.804 209 103 3 1 206 1 208 6.08e-63 202
MsG0380014629.01.T01 MTR_3g074520 63.121 141 52 0 1 141 1 141 1.24e-62 201
MsG0380014629.01.T01 MTR_7g011170 67.969 128 41 0 1 128 1 128 8.45e-62 198
MsG0380014629.01.T01 MTR_2g089620 66.418 134 44 1 1 133 1 134 2.03e-61 197
MsG0380014629.01.T01 MTR_4g082290 53.514 185 85 1 1 184 1 185 4.54e-61 199
MsG0380014629.01.T01 MTR_4g478180 61.111 144 53 1 1 141 2 145 6.19e-61 197
MsG0380014629.01.T01 MTR_5g029840 55.882 170 58 3 1 153 1 170 8.65e-61 196
MsG0380014629.01.T01 MTR_4g073420 58.108 148 58 1 1 148 1 144 1.25e-60 194
MsG0380014629.01.T01 MTR_3g097450 55.195 154 67 1 1 154 1 152 4.94e-60 193
MsG0380014629.01.T01 MTR_4g082230 52.432 185 87 1 1 184 1 185 8.50e-60 196
MsG0380014629.01.T01 MTR_5g078140 53.107 177 79 2 1 177 1 173 2.44e-59 192
MsG0380014629.01.T01 MTR_7g110830 58.442 154 61 1 1 151 1 154 4.19e-58 190
MsG0380014629.01.T01 MTR_4g102380 63.077 130 48 0 1 130 1 130 5.71e-58 187
MsG0380014629.01.T01 MTR_3g065440 61.871 139 53 0 1 139 1 139 7.96e-58 187
MsG0380014629.01.T01 MTR_1g085040 64.394 132 47 0 1 132 1 132 1.04e-57 189
MsG0380014629.01.T01 MTR_1g085640 64.394 132 47 0 1 132 1 132 5.03e-57 188
MsG0380014629.01.T01 MTR_7g076740 49.419 172 82 2 1 167 1 172 2.57e-56 184
MsG0380014629.01.T01 MTR_4g105130 63.077 130 48 0 1 130 1 130 3.06e-56 185
MsG0380014629.01.T01 MTR_3g077110 63.566 129 47 0 1 129 1 129 9.86e-56 183
MsG0380014629.01.T01 MTR_8g095390 59.848 132 53 0 1 132 1 132 1.67e-55 182
MsG0380014629.01.T01 MTR_2g064160 37.455 275 144 5 6 260 5 271 7.59e-55 180
MsG0380014629.01.T01 MTR_4g057635 64.062 128 45 1 1 127 1 128 9.77e-55 180
MsG0380014629.01.T01 MTR_1g017000 56.250 160 58 5 1 158 1 150 1.36e-54 177
MsG0380014629.01.T01 MTR_1g017140 68.067 119 37 1 1 118 1 119 1.72e-54 180
MsG0380014629.01.T01 MTR_1g100653 65.517 116 40 0 1 116 1 116 1.86e-54 179
MsG0380014629.01.T01 MTR_5g007370 60.938 128 50 0 1 128 1 128 2.96e-54 178
MsG0380014629.01.T01 MTR_5g079670 60.800 125 49 0 3 127 2 126 5.40e-54 175
MsG0380014629.01.T01 MTR_1g112760 61.417 127 49 0 3 129 4 130 5.72e-54 175
MsG0380014629.01.T01 MTR_7g111290 65.385 130 45 0 1 130 1 130 5.97e-54 180
MsG0380014629.01.T01 MTR_5g014990 66.387 119 39 1 1 118 1 119 6.43e-54 177
MsG0380014629.01.T01 MTR_1g076150 66.667 117 39 0 1 117 1 117 1.25e-53 175
MsG0380014629.01.T01 MTR_7g102110 65.000 120 41 1 1 119 1 120 1.47e-53 176
MsG0380014629.01.T01 MTR_3g103570 65.546 119 40 1 1 118 1 119 1.61e-53 177
MsG0380014629.01.T01 MTR_1g043080 65.517 116 40 0 1 116 1 116 3.51e-53 174
MsG0380014629.01.T01 MTR_8g031360 53.086 162 70 4 1 156 1 162 7.41e-53 174
MsG0380014629.01.T01 MTR_3g083540 61.600 125 48 0 5 129 34 158 1.61e-52 174
MsG0380014629.01.T01 MTR_1g043050 64.655 116 41 0 1 116 1 116 2.27e-52 172
MsG0380014629.01.T01 MTR_4g121460 63.793 116 42 0 1 116 1 116 1.05e-51 173
MsG0380014629.01.T01 MTR_2g089450 62.069 116 44 0 1 116 1 116 1.24e-51 170
MsG0380014629.01.T01 MTR_0140s0030 64.103 117 42 0 1 117 2 118 1.83e-51 172
MsG0380014629.01.T01 MTR_0489s0020 64.103 117 42 0 1 117 2 118 1.83e-51 172
MsG0380014629.01.T01 MTR_2g034790 62.931 116 43 0 1 116 1 116 3.63e-51 171
MsG0380014629.01.T01 MTR_4g125520 61.345 119 46 0 1 119 1 119 4.23e-51 170
MsG0380014629.01.T01 MTR_2g095520 66.667 111 36 1 1 110 1 111 6.84e-51 170
MsG0380014629.01.T01 MTR_5g042030 60.504 119 47 0 12 130 7 125 1.38e-50 168
MsG0380014629.01.T01 MTR_4g097570 68.182 110 34 1 1 109 1 110 1.88e-50 168
MsG0380014629.01.T01 MTR_7g010210 62.069 116 44 0 1 116 1 116 2.38e-50 167
MsG0380014629.01.T01 MTR_7g010210 62.069 116 44 0 1 116 1 116 2.63e-50 169
MsG0380014629.01.T01 MTR_3g045430 58.088 136 56 1 1 135 1 136 3.10e-50 168
MsG0380014629.01.T01 MTR_7g117730 61.207 116 45 0 1 116 1 116 9.33e-50 165
MsG0380014629.01.T01 MTR_7g115650 62.069 116 44 0 1 116 1 116 1.83e-49 163
MsG0380014629.01.T01 MTR_7g087130 60.000 125 48 1 1 123 1 125 2.06e-49 167
MsG0380014629.01.T01 MTR_3g039990 62.931 116 43 0 1 116 2 117 2.24e-49 166
MsG0380014629.01.T01 MTR_8g017440 54.110 146 61 1 1 140 1 146 2.72e-49 166
MsG0380014629.01.T01 MTR_7g096930 62.069 116 44 0 1 116 1 116 4.05e-49 164
MsG0380014629.01.T01 MTR_4g097570 67.568 111 34 2 1 109 1 111 7.24e-49 164
MsG0380014629.01.T01 MTR_2g067420 65.138 109 38 0 2 110 4 112 7.49e-49 165
MsG0380014629.01.T01 MTR_2g099740 58.462 130 54 0 1 130 1 130 2.71e-48 166
MsG0380014629.01.T01 MTR_6g090405 64.655 116 40 1 1 115 1 116 3.18e-48 161
MsG0380014629.01.T01 MTR_0008s0390 60.345 116 45 1 1 115 1 116 4.28e-48 161
MsG0380014629.01.T01 MTR_6g012180 62.727 110 41 0 1 110 1 110 6.21e-48 162
MsG0380014629.01.T01 MTR_8g098860 60.345 116 46 0 1 116 1 116 6.67e-48 162
MsG0380014629.01.T01 MTR_0251s0050 58.974 117 47 1 1 116 1 117 1.21e-47 160
MsG0380014629.01.T01 MTR_8g027345 58.621 116 48 0 1 116 1 116 1.81e-47 160
MsG0380014629.01.T01 MTR_0008s0470 58.621 116 47 1 1 115 1 116 3.22e-47 160
MsG0380014629.01.T01 MTR_8g017540 60.976 123 48 0 1 123 47 169 4.22e-47 162
MsG0380014629.01.T01 MTR_4g485530 58.400 125 51 1 3 126 2 126 1.17e-46 155
MsG0380014629.01.T01 MTR_4g128670 63.063 111 40 1 1 110 1 111 1.38e-46 160
MsG0380014629.01.T01 MTR_0063s0090 59.292 113 46 0 1 113 1 113 2.97e-46 155
MsG0380014629.01.T01 MTR_2g089420 57.759 116 48 1 1 116 1 115 5.96e-46 160
MsG0380014629.01.T01 MTR_8g017500 58.537 123 51 0 1 123 1 123 6.47e-46 158
MsG0380014629.01.T01 MTR_7g109320 62.069 116 44 0 1 116 1 116 1.78e-45 157
MsG0380014629.01.T01 MTR_5g010020 60.000 110 44 0 1 110 1 110 5.25e-45 155
MsG0380014629.01.T01 MTR_8g017390 62.393 117 43 1 1 116 1 117 8.61e-45 158
MsG0380014629.01.T01 MTR_4g065017 60.360 111 44 0 12 122 17 127 2.41e-44 153
MsG0380014629.01.T01 MTR_8g017340 58.462 130 52 2 1 129 1 129 2.93e-44 157
MsG0380014629.01.T01 MTR_4g100720 56.522 115 50 0 9 123 10 124 5.33e-44 148
MsG0380014629.01.T01 MTR_2g097910 59.259 108 44 0 12 119 20 127 9.57e-44 151
MsG0380014629.01.T01 MTR_8g017350 57.692 130 53 2 1 129 1 129 3.83e-43 156
MsG0380014629.01.T01 MTR_3g028740 62.963 108 40 0 9 116 19 126 3.96e-43 150
MsG0380014629.01.T01 MTR_6g055910 47.368 152 77 2 7 155 9 160 8.52e-43 148
MsG0380014629.01.T01 MTR_1g100667 51.095 137 66 1 13 149 14 149 2.80e-42 146
MsG0380014629.01.T01 MTR_8g020490 59.048 105 43 0 12 116 8 112 3.46e-42 145
MsG0380014629.01.T01 MTR_0008s0280 54.386 114 52 0 1 114 1 114 3.93e-42 145
MsG0380014629.01.T01 MTR_3g052450 56.481 108 47 0 8 115 36 143 1.59e-39 145
MsG0380014629.01.T01 MTR_3g052430 58.095 105 44 0 11 115 40 144 1.88e-39 144
MsG0380014629.01.T01 MTR_0247s0040 58.824 102 42 0 12 113 7 108 2.55e-39 136
MsG0380014629.01.T01 MTR_0197s0010 59.434 106 43 0 17 122 6 111 3.60e-39 137
MsG0380014629.01.T01 MTR_5g079120 55.556 108 48 0 9 116 58 165 4.92e-39 139
MsG0380014629.01.T01 MTR_1g110460 52.174 115 55 0 8 122 22 136 6.01e-39 139
MsG0380014629.01.T01 MTR_0193s0090 56.190 105 46 0 12 116 7 111 4.14e-38 134
MsG0380014629.01.T01 MTR_5g079220 53.636 110 51 0 7 116 16 125 7.80e-38 135
MsG0380014629.01.T01 MTR_7g017260 57.944 107 43 1 12 116 25 131 1.01e-37 134
MsG0380014629.01.T01 MTR_5g078930 56.757 111 47 1 6 115 2 112 1.07e-37 133
MsG0380014629.01.T01 MTR_5g079290 55.238 105 47 0 12 116 17 121 2.10e-37 133
MsG0380014629.01.T01 MTR_5g078800 57.143 105 45 0 12 116 7 111 2.74e-37 133
MsG0380014629.01.T01 MTR_1g073170 54.545 110 50 0 6 115 14 123 3.12e-37 133
MsG0380014629.01.T01 MTR_5g488170 50.435 115 55 2 11 124 11 124 4.16e-37 132
MsG0380014629.01.T01 MTR_5g088080 50.435 115 55 2 11 124 11 124 4.21e-37 133
MsG0380014629.01.T01 MTR_5g088150 50.435 115 55 2 11 124 11 124 4.21e-37 133
MsG0380014629.01.T01 MTR_5g488210 50.435 115 55 2 11 124 11 124 4.21e-37 133
MsG0380014629.01.T01 MTR_3g011610 53.982 113 51 1 12 123 37 149 4.78e-37 138
MsG0380014629.01.T01 MTR_5g088640 50.435 115 55 2 11 124 11 124 7.11e-37 132
MsG0380014629.01.T01 MTR_7g111290 72.414 87 24 0 44 130 2 88 1.10e-36 134
MsG0380014629.01.T01 MTR_7g035075 53.774 106 49 0 11 116 13 118 1.12e-36 130
MsG0380014629.01.T01 MTR_1g062940 54.717 106 48 0 11 116 5 110 1.29e-36 130
MsG0380014629.01.T01 MTR_5g062790 51.304 115 54 2 11 124 8 121 1.99e-36 132
MsG0380014629.01.T01 MTR_2g088170 56.731 104 45 0 12 115 29 132 2.97e-36 135
MsG0380014629.01.T01 MTR_4g063100 54.369 103 47 0 13 115 8 110 6.33e-36 129
MsG0380014629.01.T01 MTR_5g078950 55.882 102 45 0 12 113 7 108 6.87e-36 129
MsG0380014629.01.T01 MTR_8g060940 55.446 101 45 0 12 112 7 107 9.15e-36 129
MsG0380014629.01.T01 MTR_5g078860 54.286 105 48 0 12 116 7 111 9.29e-36 130
MsG0380014629.01.T01 MTR_6g006030 46.377 138 70 2 1 136 1 136 1.18e-35 127
MsG0380014629.01.T01 MTR_1g086510 48.800 125 63 1 12 136 21 144 1.23e-35 129
MsG0380014629.01.T01 MTR_5g078910 54.286 105 48 0 12 116 7 111 1.81e-35 129
MsG0380014629.01.T01 MTR_1g086530 50.450 111 55 0 12 122 33 143 1.94e-35 129
MsG0380014629.01.T01 MTR_8g042410 52.885 104 49 0 12 115 37 140 3.00e-35 133
MsG0380014629.01.T01 MTR_2g096380 52.336 107 51 0 9 115 3 109 3.20e-35 127
MsG0380014629.01.T01 MTR_1g045610 52.727 110 52 0 6 115 15 124 3.32e-35 127
MsG0380014629.01.T01 MTR_0001s0360 54.286 105 48 0 12 116 7 111 3.38e-35 127
MsG0380014629.01.T01 MTR_5g016510 50.459 109 53 1 14 122 5 112 1.51e-33 125
MsG0380014629.01.T01 MTR_2g033170 48.413 126 64 1 11 136 23 147 5.67e-33 123
MsG0380014629.01.T01 MTR_3g101290 39.000 200 86 7 14 199 37 214 8.44e-33 120
MsG0380014629.01.T01 MTR_1g021230 51.923 104 50 0 12 115 57 160 1.04e-32 125
MsG0380014629.01.T01 MTR_5g088610 49.565 115 56 2 11 124 8 121 3.68e-32 122
MsG0380014629.01.T01 MTR_4g094982 37.234 188 111 5 14 198 5 188 1.05e-31 119
MsG0380014629.01.T01 MTR_4g019370 49.558 113 52 2 14 126 38 145 3.80e-31 119
MsG0380014629.01.T01 MTR_4g123040 46.825 126 66 1 11 136 23 147 6.39e-31 117
MsG0380014629.01.T01 MTR_5g007300 57.955 88 37 0 1 88 53 140 1.38e-30 112
MsG0380014629.01.T01 MTR_8g006470 48.148 108 55 1 8 114 6 113 2.17e-30 115
MsG0380014629.01.T01 MTR_1g083630 45.455 121 65 1 12 131 12 132 7.23e-30 119
MsG0380014629.01.T01 MTR_3g461510 61.538 91 35 0 178 268 1 91 1.19e-29 108
MsG0380014629.01.T01 MTR_6g015455 48.649 111 56 1 14 124 5 114 1.97e-29 118
MsG0380014629.01.T01 MTR_4g029540 48.148 108 55 1 8 114 6 113 4.55e-29 112
MsG0380014629.01.T01 MTR_6g055910 47.368 114 57 2 45 155 18 131 2.89e-28 109
MsG0380014629.01.T01 MTR_4g082040 49.020 102 51 1 14 115 105 205 6.86e-28 111
MsG0380014629.01.T01 MTR_3g463400 42.222 135 74 3 14 145 133 266 1.15e-26 108
MsG0380014629.01.T01 MTR_5g041570 46.602 103 54 1 14 116 134 235 1.55e-26 108
MsG0380014629.01.T01 MTR_4g128190 46.364 110 42 3 12 117 11 107 1.88e-26 104
MsG0380014629.01.T01 MTR_5g049190 44.954 109 59 1 9 117 14 121 2.38e-26 103
MsG0380014629.01.T01 MTR_4g063100 61.111 72 28 0 44 115 10 81 4.66e-26 102
MsG0380014629.01.T01 MTR_6g074860 46.535 101 53 1 14 114 4 103 5.52e-26 103
MsG0380014629.01.T01 MTR_1g085880 52.381 105 48 2 12 114 11 115 5.63e-26 101
MsG0380014629.01.T01 MTR_5g070020 47.115 104 54 1 14 117 122 224 6.90e-26 105
MsG0380014629.01.T01 MTR_3g077650 44.545 110 60 1 8 117 175 283 8.12e-26 106
MsG0380014629.01.T01 MTR_7g061330 48.544 103 52 1 14 116 113 214 1.09e-25 106
MsG0380014629.01.T01 MTR_7g461410 48.544 103 52 1 14 116 113 214 1.09e-25 106
MsG0380014629.01.T01 MTR_7g061330 48.544 103 52 1 14 116 77 178 1.55e-25 105
MsG0380014629.01.T01 MTR_4g105660 45.794 107 55 2 12 117 178 282 1.89e-25 105
MsG0380014629.01.T01 MTR_5g082910 46.465 99 52 1 14 112 19 116 2.26e-25 102
MsG0380014629.01.T01 MTR_1g085770 52.381 105 48 2 12 114 11 115 2.43e-25 102
MsG0380014629.01.T01 MTR_2g096380 58.333 72 30 0 44 115 19 90 2.51e-24 98.2
MsG0380014629.01.T01 MTR_7g086960 47.059 102 53 1 14 115 89 189 3.49e-24 100
MsG0380014629.01.T01 MTR_7g037260 44.248 113 57 2 11 118 142 253 3.65e-24 100
MsG0380014629.01.T01 MTR_7g451170 41.905 105 60 1 11 115 188 291 1.24e-23 99.8
MsG0380014629.01.T01 MTR_3g089045 48.544 103 50 2 14 115 16 116 1.70e-23 97.4
MsG0380014629.01.T01 MTR_6g027340 45.918 98 50 2 14 110 16 111 2.12e-23 95.1
MsG0380014629.01.T01 MTR_7g061550 35.252 139 82 3 10 140 3 141 9.31e-23 96.7
MsG0380014629.01.T01 MTR_4g088015 40.385 104 61 1 11 114 218 320 1.81e-22 96.7
MsG0380014629.01.T01 MTR_6g027360 44.000 100 53 2 12 110 76 173 2.50e-22 94.7
MsG0380014629.01.T01 MTR_3g110028 39.806 103 61 1 14 116 85 186 1.09e-21 95.5
MsG0380014629.01.T01 MTR_6g027370 44.118 102 56 1 14 115 99 199 1.43e-21 93.2
MsG0380014629.01.T01 MTR_7g037130 42.478 113 59 2 11 118 142 253 1.47e-21 93.2
MsG0380014629.01.T01 MTR_1g057980 41.000 100 58 1 11 110 77 175 3.45e-21 91.3
MsG0380014629.01.T01 MTR_1g026870 38.835 103 62 1 14 116 85 186 3.86e-21 93.6
MsG0380014629.01.T01 MTR_0023s0210 49.351 77 39 0 12 88 7 83 5.16e-21 85.5
MsG0380014629.01.T01 MTR_5g010650 44.000 100 54 2 10 109 107 204 2.63e-20 90.9
MsG0380014629.01.T01 MTR_7g035350 41.000 100 58 1 11 110 222 320 5.62e-20 89.7
MsG0380014629.01.T01 MTR_7g450950 37.615 109 64 2 11 116 154 261 1.06e-19 87.8
MsG0380014629.01.T01 MTR_5g038910 42.424 99 56 1 17 115 29 126 4.50e-18 84.3
MsG0380014629.01.T01 MTR_8g468380 35.211 142 84 3 17 152 25 164 6.05e-18 83.6
MsG0380014629.01.T01 MTR_5g038910 42.424 99 56 1 17 115 29 126 6.61e-18 83.2
MsG0380014629.01.T01 MTR_8g017480 57.692 52 22 0 1 52 1 52 1.28e-13 64.7
MsG0380014629.01.T01 MTR_6g055910 38.202 89 52 2 70 155 2 90 2.11e-12 65.5
MsG0380014629.01.T01 MTR_4g063100 59.524 42 17 0 74 115 5 46 2.05e-11 62.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380014629.01.T01 AT5G56110 82.659 173 27 1 1 170 1 173 1.37e-102 302
MsG0380014629.01.T01 AT4G21440 60.897 156 58 1 1 153 1 156 1.67e-65 209
MsG0380014629.01.T01 AT4G05100 71.318 129 36 1 1 128 1 129 5.44e-65 206
MsG0380014629.01.T01 AT4G28110 70.312 128 38 0 1 128 1 128 8.15e-65 205
MsG0380014629.01.T01 AT3G28470 72.059 136 38 0 1 136 1 136 6.65e-63 201
MsG0380014629.01.T01 AT4G17785 63.504 137 49 1 1 136 1 137 7.23e-62 199
MsG0380014629.01.T01 AT4G17785 63.504 137 49 1 1 136 1 137 8.64e-62 199
MsG0380014629.01.T01 AT5G15310 66.406 128 43 0 1 128 1 128 3.24e-61 194
MsG0380014629.01.T01 AT5G15310 66.406 128 43 0 1 128 1 128 5.44e-61 196
MsG0380014629.01.T01 AT5G16770 64.844 128 45 0 1 128 1 128 6.15e-61 196
MsG0380014629.01.T01 AT5G16770 64.844 128 45 0 1 128 1 128 6.15e-61 196
MsG0380014629.01.T01 AT5G15310 66.406 128 43 0 1 128 1 128 6.85e-61 196
MsG0380014629.01.T01 AT3G02940 64.844 128 45 0 1 128 1 128 7.07e-61 196
MsG0380014629.01.T01 AT1G35515 66.667 126 42 0 1 126 1 126 8.99e-61 192
MsG0380014629.01.T01 AT1G34670 62.411 141 53 0 1 141 1 141 1.00e-60 197
MsG0380014629.01.T01 AT3G01140 66.929 127 42 0 1 127 1 127 1.17e-60 196
MsG0380014629.01.T01 AT3G02940 64.844 128 45 0 1 128 1 128 1.30e-60 195
MsG0380014629.01.T01 AT3G02940 64.844 128 45 0 1 128 1 128 1.30e-60 195
MsG0380014629.01.T01 AT5G16770 64.844 128 45 0 1 128 1 128 1.34e-60 196
MsG0380014629.01.T01 AT5G16770 64.844 128 45 0 1 128 1 128 1.34e-60 196
MsG0380014629.01.T01 AT4G34990 64.615 130 46 0 1 130 1 130 4.61e-60 192
MsG0380014629.01.T01 AT5G10280 50.286 175 80 2 1 170 1 173 8.23e-60 194
MsG0380014629.01.T01 AT2G16720 64.567 127 45 0 1 127 1 127 3.13e-59 190
MsG0380014629.01.T01 AT4G09460 57.639 144 61 0 1 144 1 144 3.83e-59 189
MsG0380014629.01.T01 AT3G61250 56.954 151 62 2 1 150 1 149 7.61e-59 190
MsG0380014629.01.T01 AT1G66230 63.704 135 49 0 1 135 1 135 7.85e-59 189
MsG0380014629.01.T01 AT4G38620 62.016 129 49 0 1 129 1 129 2.46e-58 188
MsG0380014629.01.T01 AT5G14340 61.364 132 51 0 1 132 13 144 3.85e-58 187
MsG0380014629.01.T01 AT1G22640 50.857 175 69 2 1 175 1 158 4.83e-58 187
MsG0380014629.01.T01 AT3G01140 66.667 123 41 0 5 127 48 170 6.15e-58 190
MsG0380014629.01.T01 AT4G12350 62.222 135 51 0 1 135 1 135 1.08e-57 187
MsG0380014629.01.T01 AT4G01680 63.768 138 46 1 1 138 1 134 1.50e-57 185
MsG0380014629.01.T01 AT5G60890 41.935 217 117 1 1 208 1 217 1.80e-57 186
MsG0380014629.01.T01 AT5G65230 64.062 128 46 0 1 128 1 128 1.90e-57 187
MsG0380014629.01.T01 AT5G54230 64.662 133 47 0 1 133 1 133 2.71e-57 187
MsG0380014629.01.T01 AT1G57560 44.091 220 101 2 1 205 1 213 3.09e-57 186
MsG0380014629.01.T01 AT4G01680 63.768 138 46 1 1 138 1 134 1.15e-56 186
MsG0380014629.01.T01 AT4G22680 58.741 143 59 0 1 143 1 143 2.24e-56 182
MsG0380014629.01.T01 AT1G57560 63.077 130 48 0 1 130 1 130 3.65e-56 182
MsG0380014629.01.T01 AT5G26660 63.566 129 47 0 1 129 1 129 1.00e-55 184
MsG0380014629.01.T01 AT5G16600 47.208 197 93 2 1 197 1 186 1.09e-55 183
MsG0380014629.01.T01 AT5G61420 61.538 130 50 0 1 130 1 130 1.18e-55 184
MsG0380014629.01.T01 AT5G07690 61.069 131 51 0 1 131 1 131 1.58e-55 182
MsG0380014629.01.T01 AT1G09540 62.879 132 49 0 1 132 1 132 2.63e-55 183
MsG0380014629.01.T01 AT1G18570 59.542 131 52 1 1 130 1 131 2.44e-54 180
MsG0380014629.01.T01 AT2G47460 56.849 146 63 0 1 146 1 146 5.23e-54 180
MsG0380014629.01.T01 AT1G74080 58.140 129 54 0 1 129 1 129 6.55e-54 178
MsG0380014629.01.T01 AT3G23250 65.517 116 40 0 1 116 1 116 7.24e-54 177
MsG0380014629.01.T01 AT2G31180 67.521 117 38 0 1 117 1 117 1.37e-53 175
MsG0380014629.01.T01 AT5G07700 61.538 130 50 0 1 130 1 130 1.61e-53 177
MsG0380014629.01.T01 AT5G07700 61.538 130 50 0 1 130 1 130 1.61e-53 177
MsG0380014629.01.T01 AT1G18710 58.140 129 54 0 1 129 1 129 2.01e-53 175
MsG0380014629.01.T01 AT1G74430 59.375 128 52 0 1 128 1 128 2.20e-53 175
MsG0380014629.01.T01 AT4G01680 58.667 150 46 2 1 138 1 146 3.67e-53 177
MsG0380014629.01.T01 AT1G79180 62.992 127 44 1 2 125 4 130 3.76e-53 175
MsG0380014629.01.T01 AT5G57620 65.546 119 40 1 1 118 1 119 1.68e-52 175
MsG0380014629.01.T01 AT3G49690 66.667 117 38 1 1 116 1 117 2.34e-52 174
MsG0380014629.01.T01 AT3G13540 60.800 125 49 0 5 129 16 140 7.50e-52 171
MsG0380014629.01.T01 AT1G16490 65.517 116 40 0 2 117 4 119 1.12e-51 171
MsG0380014629.01.T01 AT5G62470 65.517 116 40 0 1 116 1 116 1.57e-51 172
MsG0380014629.01.T01 AT1G74650 64.706 119 42 0 1 119 1 119 2.54e-51 171
MsG0380014629.01.T01 AT5G65790 64.957 117 40 1 1 116 1 117 3.44e-51 172
MsG0380014629.01.T01 AT5G62320 43.979 191 97 2 2 185 3 190 3.78e-51 169
MsG0380014629.01.T01 AT3G12720 61.157 121 47 0 6 126 16 136 5.44e-51 170
MsG0380014629.01.T01 AT1G06180 64.655 116 41 0 1 116 1 116 5.74e-51 168
MsG0380014629.01.T01 AT5G49330 64.655 116 41 0 1 116 1 116 6.81e-51 171
MsG0380014629.01.T01 AT2G36890 54.248 153 49 2 1 152 1 133 8.97e-51 169
MsG0380014629.01.T01 AT2G36890 54.248 153 49 2 1 152 42 174 1.47e-50 170
MsG0380014629.01.T01 AT3G62610 60.000 125 50 0 1 125 1 125 2.08e-50 169
MsG0380014629.01.T01 AT3G47600 62.185 119 45 0 1 119 1 119 3.49e-50 169
MsG0380014629.01.T01 AT5G23000 64.103 117 41 1 1 116 1 117 3.62e-50 169
MsG0380014629.01.T01 AT4G37780 63.248 117 42 1 1 116 1 117 8.27e-50 167
MsG0380014629.01.T01 AT5G62470 65.517 116 39 1 1 116 1 115 1.05e-49 168
MsG0380014629.01.T01 AT1G56160 62.069 116 44 0 2 117 4 119 2.51e-49 165
MsG0380014629.01.T01 AT3G28910 60.656 122 48 0 1 122 1 122 2.55e-49 166
MsG0380014629.01.T01 AT1G08810 61.538 117 45 0 1 117 1 117 1.51e-48 163
MsG0380014629.01.T01 AT3G13890 63.793 116 42 0 1 116 1 116 1.92e-48 165
MsG0380014629.01.T01 AT3G12820 61.404 114 44 0 3 116 5 118 1.35e-47 159
MsG0380014629.01.T01 AT1G79180 50.625 160 43 2 2 125 4 163 4.16e-47 160
MsG0380014629.01.T01 AT1G63910 60.345 116 46 0 1 116 1 116 7.27e-47 161
MsG0380014629.01.T01 AT3G13890 59.200 125 42 1 1 116 1 125 1.91e-45 157
MsG0380014629.01.T01 AT5G12870 62.037 108 41 0 12 119 18 125 1.17e-44 153
MsG0380014629.01.T01 AT5G35550 58.333 108 45 0 9 116 11 118 3.76e-43 148
MsG0380014629.01.T01 AT3G27920 58.407 113 45 1 8 118 8 120 5.44e-43 147
MsG0380014629.01.T01 AT5G40330 59.259 108 43 1 13 120 13 119 6.10e-42 144
MsG0380014629.01.T01 AT5G52600 54.264 129 50 1 9 128 9 137 8.45e-42 143
MsG0380014629.01.T01 AT5G14750 59.615 104 42 0 13 116 17 120 1.60e-41 142
MsG0380014629.01.T01 AT3G08500 60.185 108 43 0 9 116 27 134 2.37e-40 143
MsG0380014629.01.T01 AT5G55020 53.982 113 51 1 12 123 26 138 1.27e-38 142
MsG0380014629.01.T01 AT1G25340 51.304 115 56 0 13 127 19 133 1.63e-38 137
MsG0380014629.01.T01 AT2G26960 39.500 200 112 4 9 202 17 213 2.45e-38 140
MsG0380014629.01.T01 AT5G26660 67.778 90 29 0 40 129 9 98 2.68e-38 137
MsG0380014629.01.T01 AT2G32460 53.704 108 50 0 8 115 14 121 3.02e-38 140
MsG0380014629.01.T01 AT2G32460 54.808 104 47 0 12 115 6 109 3.45e-38 140
MsG0380014629.01.T01 AT5G40350 50.000 128 64 0 12 139 17 144 1.72e-37 132
MsG0380014629.01.T01 AT1G48000 47.552 143 69 3 12 149 32 173 1.76e-37 133
MsG0380014629.01.T01 AT4G25560 59.223 103 42 0 13 115 11 113 3.71e-37 133
MsG0380014629.01.T01 AT5G52260 59.813 107 43 0 9 115 9 115 4.21e-37 133
MsG0380014629.01.T01 AT4G26930 48.760 121 61 1 12 131 19 139 5.58e-37 135
MsG0380014629.01.T01 AT5G06100 52.212 113 53 1 12 123 32 144 6.68e-37 136
MsG0380014629.01.T01 AT1G68320 38.824 170 90 1 10 165 17 186 8.70e-37 132
MsG0380014629.01.T01 AT2G47190 39.884 173 99 3 8 180 16 183 9.86e-37 132
MsG0380014629.01.T01 AT3G48920 53.211 109 51 0 9 117 15 123 1.22e-36 131
MsG0380014629.01.T01 AT5G06100 54.808 104 47 0 12 115 32 135 1.76e-36 136
MsG0380014629.01.T01 AT5G06100 54.808 104 47 0 12 115 32 135 1.76e-36 136
MsG0380014629.01.T01 AT5G06100 54.808 104 47 0 12 115 32 135 1.76e-36 136
MsG0380014629.01.T01 AT5G06100 54.808 104 47 0 12 115 32 135 1.76e-36 136
MsG0380014629.01.T01 AT3G27810 49.600 125 62 1 12 136 20 143 3.74e-36 129
MsG0380014629.01.T01 AT3G11440 52.885 104 49 0 12 115 41 144 6.24e-36 134
MsG0380014629.01.T01 AT3G01530 51.376 109 53 0 8 116 21 129 6.70e-36 128
MsG0380014629.01.T01 AT4G13480 57.282 103 44 0 13 115 7 109 1.36e-35 129
MsG0380014629.01.T01 AT3G11440 52.885 104 49 0 12 115 41 144 1.85e-35 134
MsG0380014629.01.T01 AT3G11440 52.885 104 49 0 12 115 41 144 1.85e-35 134
MsG0380014629.01.T01 AT3G11440 52.885 104 49 0 12 115 41 144 1.85e-35 134
MsG0380014629.01.T01 AT3G24310 56.311 103 45 0 13 115 19 121 2.70e-35 128
MsG0380014629.01.T01 AT1G18960 51.261 119 55 2 17 135 13 128 7.10e-35 128
MsG0380014629.01.T01 AT3G30210 55.882 102 45 0 13 114 28 129 7.57e-35 127
MsG0380014629.01.T01 AT1G66370 52.885 104 49 0 12 115 8 111 3.54e-34 124
MsG0380014629.01.T01 AT1G66380 46.970 132 60 1 12 143 8 129 1.02e-33 120
MsG0380014629.01.T01 AT1G25340 48.696 115 54 1 13 127 19 128 1.28e-33 124
MsG0380014629.01.T01 AT3G06490 50.000 126 62 1 11 136 18 142 1.36e-33 125
MsG0380014629.01.T01 AT1G25340 48.696 115 54 1 13 127 19 128 1.85e-33 124
MsG0380014629.01.T01 AT3G60460 51.376 109 52 1 7 114 6 114 5.28e-33 123
MsG0380014629.01.T01 AT5G59780 48.598 107 55 0 9 115 5 111 1.28e-32 120
MsG0380014629.01.T01 AT2G26950 46.018 113 60 1 9 121 13 124 1.32e-32 124
MsG0380014629.01.T01 AT3G46130 51.456 103 50 0 13 115 10 112 2.64e-32 120
MsG0380014629.01.T01 AT5G49620 43.243 148 81 2 8 153 22 168 3.32e-32 121
MsG0380014629.01.T01 AT5G35550 68.056 72 23 0 45 116 50 121 4.31e-32 119
MsG0380014629.01.T01 AT3G53200 50.467 107 53 0 9 115 6 112 5.39e-32 119
MsG0380014629.01.T01 AT4G37260 52.885 104 48 1 14 117 13 115 7.63e-32 120
MsG0380014629.01.T01 AT2G23290 52.727 110 50 2 8 117 8 115 9.32e-32 120
MsG0380014629.01.T01 AT1G66390 54.808 104 47 0 12 115 8 111 1.20e-31 118
MsG0380014629.01.T01 AT1G56650 54.808 104 47 0 12 115 8 111 1.77e-31 117
MsG0380014629.01.T01 AT5G67300 52.381 105 49 1 14 118 6 109 3.51e-31 118
MsG0380014629.01.T01 AT2G39880 42.857 154 74 4 14 161 50 195 4.17e-30 117
MsG0380014629.01.T01 AT3G50060 53.211 109 49 2 10 118 3 109 4.38e-30 115
MsG0380014629.01.T01 AT5G14750 66.667 69 23 0 48 116 18 86 1.15e-29 110
MsG0380014629.01.T01 AT3G47600 64.000 75 27 0 45 119 39 113 6.53e-29 112
MsG0380014629.01.T01 AT5G49620 39.506 162 81 3 8 153 22 182 1.57e-28 111
MsG0380014629.01.T01 AT1G69560 47.706 109 54 2 9 116 102 208 1.87e-28 111
MsG0380014629.01.T01 AT3G12820 66.667 69 23 0 48 116 2 70 1.95e-28 108
MsG0380014629.01.T01 AT1G69560 47.706 109 54 2 9 116 118 224 1.98e-28 112
MsG0380014629.01.T01 AT1G22640 45.299 117 47 2 59 175 2 101 2.21e-28 108
MsG0380014629.01.T01 AT1G71030 58.025 81 34 0 51 131 5 85 2.40e-28 107
MsG0380014629.01.T01 AT3G09230 46.296 108 56 2 9 116 51 156 2.81e-28 112
MsG0380014629.01.T01 AT1G71030 55.682 88 38 1 44 131 13 99 2.84e-28 107
MsG0380014629.01.T01 AT5G40350 50.515 97 48 0 43 139 3 99 1.90e-27 105
MsG0380014629.01.T01 AT3G55730 48.113 106 54 1 14 119 56 160 2.83e-27 109
MsG0380014629.01.T01 AT3G27785 46.847 111 56 2 8 117 183 291 1.28e-26 108
MsG0380014629.01.T01 AT5G58850 46.729 107 56 1 11 117 102 207 1.55e-26 108
MsG0380014629.01.T01 AT5G40360 43.750 112 61 2 8 119 152 261 2.40e-26 106
MsG0380014629.01.T01 AT1G26780 47.573 103 51 2 14 115 98 198 4.77e-26 104
MsG0380014629.01.T01 AT1G26780 46.667 105 53 2 12 115 96 198 6.56e-26 105
MsG0380014629.01.T01 AT5G17800 48.039 102 52 1 14 115 93 193 6.79e-26 104
MsG0380014629.01.T01 AT5G11050 44.860 107 58 1 11 117 102 207 7.57e-26 106
MsG0380014629.01.T01 AT1G17950 47.059 102 53 1 14 115 5 105 1.67e-25 102
MsG0380014629.01.T01 AT5G59780 52.809 89 37 1 27 115 7 90 2.20e-25 100
MsG0380014629.01.T01 AT3G27810 50.000 92 45 1 45 136 4 94 2.37e-25 99.8
MsG0380014629.01.T01 AT4G33450 43.519 108 60 1 8 115 13 119 3.64e-25 101
MsG0380014629.01.T01 AT1G66380 49.020 102 42 1 44 145 7 98 9.98e-25 95.9
MsG0380014629.01.T01 AT3G53200 60.563 71 28 0 45 115 9 79 1.09e-24 98.6
MsG0380014629.01.T01 AT4G18770 41.818 110 63 1 8 117 211 319 1.47e-24 102
MsG0380014629.01.T01 AT3G46130 58.333 72 30 0 44 115 9 80 1.95e-24 98.6
MsG0380014629.01.T01 AT3G46130 59.155 71 29 0 45 115 20 90 3.41e-24 98.2
MsG0380014629.01.T01 AT5G02320 44.660 103 56 1 14 116 127 228 5.28e-24 101
MsG0380014629.01.T01 AT5G02320 44.660 103 56 1 14 116 127 228 5.28e-24 101
MsG0380014629.01.T01 AT5G02320 44.660 103 56 1 14 116 67 168 7.24e-24 101
MsG0380014629.01.T01 AT3G29020 43.689 103 57 1 14 116 65 166 1.17e-23 96.7
MsG0380014629.01.T01 AT1G73410 48.544 103 50 2 14 115 6 106 1.60e-23 95.5
MsG0380014629.01.T01 AT1G73410 48.544 103 50 2 14 115 6 106 2.23e-23 96.3
MsG0380014629.01.T01 AT3G29020 43.689 103 57 1 14 116 67 168 2.46e-23 97.4
MsG0380014629.01.T01 AT4G32730 39.806 103 61 1 14 116 87 188 1.79e-22 97.8
MsG0380014629.01.T01 AT4G32730 39.806 103 61 1 14 116 87 188 1.79e-22 97.8
MsG0380014629.01.T01 AT4G32730 39.806 103 61 1 14 116 87 188 1.79e-22 97.8
MsG0380014629.01.T01 AT4G32730 39.806 103 61 1 14 116 87 188 1.79e-22 97.8
MsG0380014629.01.T01 AT4G32730 39.806 103 61 1 14 116 87 188 2.24e-22 97.4
MsG0380014629.01.T01 AT3G09370 44.118 102 56 1 14 115 135 235 2.62e-22 96.7
MsG0380014629.01.T01 AT3G09370 44.118 102 56 1 14 115 130 230 3.12e-22 96.7
MsG0380014629.01.T01 AT3G09370 44.118 102 56 1 14 115 143 243 3.23e-22 96.7
MsG0380014629.01.T01 AT2G25230 37.500 120 72 2 7 124 19 137 1.39e-21 91.3
MsG0380014629.01.T01 AT5G11510 39.252 107 56 2 14 116 81 182 6.08e-21 93.2
MsG0380014629.01.T01 AT5G11510 39.252 107 56 2 14 116 81 182 6.08e-21 93.2
MsG0380014629.01.T01 AT5G11510 39.252 107 56 2 14 116 81 182 6.08e-21 93.2
MsG0380014629.01.T01 AT5G11510 39.252 107 56 2 14 116 81 182 8.13e-21 92.8
MsG0380014629.01.T01 AT5G11510 39.806 103 61 1 14 116 81 182 8.74e-21 92.8
MsG0380014629.01.T01 AT3G23250 62.069 58 22 0 59 116 2 59 1.35e-20 88.6
MsG0380014629.01.T01 AT2G37630 32.353 136 85 2 13 141 3 138 1.37e-20 90.9
MsG0380014629.01.T01 AT5G14750 62.069 58 22 0 59 116 2 59 1.44e-20 85.9
MsG0380014629.01.T01 AT5G14750 62.069 58 22 0 59 116 2 59 1.44e-20 85.9
MsG0380014629.01.T01 AT5G39700 41.000 100 58 1 15 114 57 155 2.75e-19 84.0
MsG0380014629.01.T01 AT1G66380 45.783 83 45 0 12 94 8 90 7.63e-19 80.5
MsG0380014629.01.T01 AT5G40430 33.083 133 85 3 7 137 47 177 2.64e-18 82.8
MsG0380014629.01.T01 AT2G02820 41.414 99 57 1 17 115 33 130 4.42e-18 83.2
MsG0380014629.01.T01 AT2G02820 41.414 99 57 1 17 115 33 130 7.18e-18 83.6
MsG0380014629.01.T01 AT2G02820 41.414 99 57 1 17 115 33 130 7.34e-18 83.6
MsG0380014629.01.T01 AT1G14350 42.424 99 56 1 17 115 28 125 2.22e-17 82.0
MsG0380014629.01.T01 AT1G14350 42.424 99 56 1 17 115 28 125 2.22e-17 82.0
MsG0380014629.01.T01 AT4G00540 38.532 109 63 2 11 116 100 207 4.01e-16 78.2
MsG0380014629.01.T01 AT4G00540 38.532 109 63 2 11 116 98 205 5.75e-16 77.8
MsG0380014629.01.T01 AT5G61420 64.000 50 18 0 81 130 2 51 8.50e-16 76.3
MsG0380014629.01.T01 AT4G28110 70.732 41 12 0 88 128 4 44 7.45e-15 72.0
MsG0380014629.01.T01 AT5G15310 68.889 45 14 0 84 128 5 49 1.06e-14 72.4
MsG0380014629.01.T01 AT5G14340 54.717 53 23 1 81 132 2 54 2.82e-14 70.1
MsG0380014629.01.T01 AT1G74430 58.333 48 20 0 81 128 12 59 1.67e-13 68.2
MsG0380014629.01.T01 AT1G22640 39.773 88 36 2 88 175 16 86 2.49e-13 67.4
MsG0380014629.01.T01 AT4G25560 64.286 42 15 0 74 115 6 47 8.66e-12 63.9
MsG0380014629.01.T01 AT3G28910 60.000 45 18 0 78 122 2 46 2.87e-11 62.8
MsG0380014629.01.T01 AT5G59780 57.143 42 18 0 74 115 5 46 3.91e-11 60.8
MsG0380014629.01.T01 AT3G46130 57.143 42 18 0 74 115 5 46 6.29e-11 60.8
MsG0380014629.01.T01 AT1G74650 61.905 42 16 0 78 119 2 43 6.39e-11 62.0

Find 76 sgRNAs with CRISPR-Local

Find 110 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAAGCCATTCTCCCATTTAA+TGG 0.217063 3:+57477980 MsG0380014628.01.T01:CDS
TAGCAATTTCAGCCATTAAA+TGG 0.223128 3:-57477992 None:intergenic
CATTTCTTGTTCTTGTTGTA+TGG 0.251023 3:-57478222 None:intergenic
ACAGCATCTTCTCTTTCTTC+TGG 0.260623 3:-57478170 None:intergenic
CAATTCAGCCCATCATGTTT+TGG 0.275499 3:+57478335 MsG0380014628.01.T01:intron
CTCAACATGGCACTCGCAAC+TGG 0.327158 3:+57477497 MsG0380014628.01.T01:CDS
GAAGGACTAACCAGCATTCT+TGG 0.330007 3:-57477530 None:intergenic
AATGTTTACCCTACAATGTC+TGG 0.342765 3:+57478308 MsG0380014628.01.T01:intron
ACAGTCTGAGTTGAATATAT+TGG 0.366444 3:-57478504 None:intergenic
GATTAAGTTTGACCTATCTA+AGG 0.367315 3:+57478199 MsG0380014628.01.T01:intron
CCTCTTCTCCATCCGAGAAA+TGG 0.397513 3:-57477704 None:intergenic
GAGAATGGCTTGTGGGTGAC+AGG 0.403681 3:-57477969 None:intergenic
CTTGTTGTATGGCCTTAGAT+AGG 0.418669 3:-57478211 None:intergenic
TATAATATTTCTTATACCAT+AGG 0.421907 3:-57478563 None:intergenic
GTGTCCCAAGGTTTATTTGT+GGG 0.425448 3:-57478248 None:intergenic
AAATGGCCATGTTTCAGATC+AGG 0.429618 3:-57477687 None:intergenic
CTGATAGCAGCGCAGCTGCC+AGG 0.436902 3:+57477873 MsG0380014628.01.T01:CDS
TCAGCCATTAAATGGGAGAA+TGG 0.437379 3:-57477984 None:intergenic
TCTGAAACATGGCCATTTCT+CGG 0.444221 3:+57477692 MsG0380014628.01.T01:CDS
CCTTTATTGCCAAAACATGA+TGG 0.447943 3:-57478344 None:intergenic
TGCTTCCAGTACATAAACTT+TGG 0.463807 3:-57478385 None:intergenic
ATTGTAGGGTAAACATTGTA+TGG 0.467777 3:-57478302 None:intergenic
GAGAGCTTGTTATCTTCCTC+AGG 0.467842 3:-57477463 None:intergenic
ATAATATTTCTTATACCATA+GGG 0.469555 3:-57478562 None:intergenic
ACATCATTGTCGGTGCGTCC+TGG 0.471385 3:-57477891 None:intergenic
CATACAACAAGAACAAGAAA+TGG 0.471573 3:+57478223 MsG0380014628.01.T01:intron
AGCAATTTCAGCCATTAAAT+GGG 0.472879 3:-57477991 None:intergenic
AAGGACTAACCAGCATTCTT+GGG 0.483633 3:-57477529 None:intergenic
TCACCTAGCTGAAGCAGCCT+TGG 0.491616 3:+57478040 MsG0380014628.01.T01:CDS
AATTGAAACCCAGACATTGT+AGG 0.493777 3:-57478317 None:intergenic
GTACATAAACTTTGGCTCCA+TGG 0.498108 3:-57478377 None:intergenic
CGCCTCATTCCCAAGAATGC+TGG 0.504148 3:+57477520 MsG0380014628.01.T01:CDS
GCCATGTTGAGCAATGTAAG+AGG 0.506799 3:-57477485 None:intergenic
GGCTGAAATTGCTACAACAT+TGG 0.510087 3:+57478001 MsG0380014628.01.T01:CDS
CGATGATTTAATGAACCCTA+TGG 0.511276 3:+57478547 MsG0380014628.01.T01:intron
GTGGAAAGAGCTGCAGGCTA+AGG 0.513697 3:+57477646 MsG0380014628.01.T01:CDS
AGAGATGTGGAAAGAGCTGC+AGG 0.518445 3:+57477640 MsG0380014628.01.T01:CDS
GAAAGAGCTGCAGGCTAAGG+TGG 0.518447 3:+57477649 MsG0380014628.01.T01:CDS
TGGAGCCAAAGTTTATGTAC+TGG 0.524375 3:+57478380 MsG0380014628.01.T01:intron
AGAATGGCTTGTGGGTGACA+GGG 0.524652 3:-57477968 None:intergenic
GGTACCCACAAATAAACCTT+GGG 0.525783 3:+57478244 MsG0380014628.01.T01:intron
ATGTTTACCCTACAATGTCT+GGG 0.526506 3:+57478309 MsG0380014628.01.T01:intron
GCTAGGTGAGCTGCCTGTGG+CGG 0.527045 3:-57478026 None:intergenic
ATTGAAACCCAGACATTGTA+GGG 0.535977 3:-57478316 None:intergenic
CATAGGGTTCATTAAATCAT+CGG 0.538774 3:-57478546 None:intergenic
AACCAGCATTCTTGGGAATG+AGG 0.548940 3:-57477522 None:intergenic
CTTTATTGCCAAAACATGAT+GGG 0.551853 3:-57478343 None:intergenic
GGGTTCATTAAATCATCGGC+TGG 0.556449 3:-57478542 None:intergenic
ACTTGCAGTTGTTGCTGCAG+TGG 0.558821 3:-57478270 None:intergenic
TCCTCTTACATTGCTCAACA+TGG 0.561657 3:+57477484 MsG0380014628.01.T01:CDS
AAACATGGCCATTTCTCGGA+TGG 0.561724 3:+57477696 MsG0380014628.01.T01:CDS
TACAACATTGGCACCGCCAC+AGG 0.565334 3:+57478013 MsG0380014628.01.T01:CDS
CAACCAAGGCTGCTTCAGCT+AGG 0.565406 3:-57478043 None:intergenic
TGGTACCCACAAATAAACCT+TGG 0.568184 3:+57478243 MsG0380014628.01.T01:intron
GGTGTCCCAAGGTTTATTTG+TGG 0.570222 3:-57478249 None:intergenic
GTTGCTGCAGTGGTGTCCCA+AGG 0.570689 3:-57478260 None:intergenic
TTAATAGGTCTTCAGAGATG+TGG 0.574139 3:+57477627 MsG0380014628.01.T01:intron
AATGGCCATGTTTCAGATCA+GGG 0.575848 3:-57477686 None:intergenic
ACATTGTCCTTCTCACAGCA+TGG 0.579859 3:-57477421 None:intergenic
TAAATGGGAGAATGGCTTGT+GGG 0.580198 3:-57477976 None:intergenic
TCGTATTCCATGCTGTGAGA+AGG 0.593369 3:+57477414 MsG0380014628.01.T01:CDS
CCATTTCTCGGATGGAGAAG+AGG 0.594360 3:+57477704 MsG0380014628.01.T01:CDS
TCAACTCAGACTGTGTCGTG+TGG 0.600659 3:+57478513 MsG0380014628.01.T01:intron
CTTCGCCCTGATCTGAAACA+TGG 0.601248 3:+57477681 MsG0380014628.01.T01:CDS
CAACTCAGACTGTGTCGTGT+GGG 0.601754 3:+57478514 MsG0380014628.01.T01:intron
TGGAAGCACATGCATAGCCA+TGG 0.601860 3:+57478400 MsG0380014628.01.T01:intron
AAACTGGCTTTGCTGATCCA+TGG 0.603647 3:-57478417 None:intergenic
TCAGCTAGGTGAGCTGCCTG+TGG 0.608657 3:-57478029 None:intergenic
AAAACTTGAAGAGGAAAATG+GGG 0.610613 3:+57478445 MsG0380014628.01.T01:intron
GGAAAATGGGGATGATTCTG+AGG 0.614466 3:+57478457 MsG0380014628.01.T01:intron
GAGAGGTCAGTGGACACCTG+AGG 0.624551 3:+57477447 MsG0380014628.01.T01:CDS
CATGTTTCAGATCAGGGCGA+AGG 0.628322 3:-57477680 None:intergenic
GAGAAGGACAATGTGAAGAG+AGG 0.654708 3:+57477430 MsG0380014628.01.T01:CDS
ATAAAGGGGATGCATCACCA+TGG 0.694152 3:+57478360 MsG0380014628.01.T01:intron
TTAAATGGGAGAATGGCTTG+TGG 0.703670 3:-57477977 None:intergenic
ACAATGTGAAGAGAGGTCAG+TGG 0.730164 3:+57477437 MsG0380014628.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATTATATTTAGACGAATA+GGG - Chr3:57477557-57477576 None:intergenic 15.0%
!!! TTTTTGTGGATTAAATTAAT+AGG + Chr3:57477612-57477631 MsG0380014628.01.T01:intron 15.0%
!! CAAATTATATTTAGACGAAT+AGG - Chr3:57477558-57477577 None:intergenic 20.0%
!!! ACTTTAATACTTGATTTTTG+TGG + Chr3:57477598-57477617 MsG0380014628.01.T01:intron 20.0%
! AAAAACTTGAAGAGGAAAAT+GGG + Chr3:57478444-57478463 MsG0380014628.01.T01:intron 25.0%
! ACAATGATGTCAAAAATCAT+TGG + Chr3:57477904-57477923 MsG0380014628.01.T01:CDS 25.0%
! CAAATGTTATCTATGCATTA+AGG + Chr3:57477770-57477789 MsG0380014628.01.T01:intron 25.0%
! TAATGCATAGATAACATTTG+TGG - Chr3:57477770-57477789 None:intergenic 25.0%
!! ATGATTTTTGACATCATTGT+CGG - Chr3:57477904-57477923 None:intergenic 25.0%
!! TGCTTAAATTGTTGTTAAGA+TGG + Chr3:57477847-57477866 MsG0380014628.01.T01:intron 25.0%
AAAACTTGAAGAGGAAAATG+GGG + Chr3:57478445-57478464 MsG0380014628.01.T01:intron 30.0%
AGCAATTTCAGCCATTAAAT+GGG - Chr3:57477994-57478013 None:intergenic 30.0%
ATTGTAGGGTAAACATTGTA+TGG - Chr3:57478305-57478324 None:intergenic 30.0%
CATACAACAAGAACAAGAAA+TGG + Chr3:57478223-57478242 MsG0380014628.01.T01:intron 30.0%
CATAGGGTTCATTAAATCAT+CGG - Chr3:57478549-57478568 None:intergenic 30.0%
CTTTATTGCCAAAACATGAT+GGG - Chr3:57478346-57478365 None:intergenic 30.0%
GAAAAACTTGAAGAGGAAAA+TGG + Chr3:57478443-57478462 MsG0380014628.01.T01:intron 30.0%
GATTAAGTTTGACCTATCTA+AGG + Chr3:57478199-57478218 MsG0380014628.01.T01:intron 30.0%
GTTTCATGAAAAACTTGAAG+AGG + Chr3:57478436-57478455 MsG0380014628.01.T01:intron 30.0%
TAGCAATTTCAGCCATTAAA+TGG - Chr3:57477995-57478014 None:intergenic 30.0%
! ACAGTCTGAGTTGAATATAT+TGG - Chr3:57478507-57478526 None:intergenic 30.0%
! CATTTCTTGTTCTTGTTGTA+TGG - Chr3:57478225-57478244 None:intergenic 30.0%
!! CTTCAAGTTTTTCATGAAAC+TGG - Chr3:57478436-57478455 None:intergenic 30.0%
!!! ATCATGTTTTGGCAATAAAG+GGG + Chr3:57478346-57478365 MsG0380014628.01.T01:intron 30.0%
!!! CATCATGTTTTGGCAATAAA+GGG + Chr3:57478345-57478364 MsG0380014628.01.T01:intron 30.0%
!!! TTCATTCAGTTTTTGGTAAC+AGG + Chr3:57477742-57477761 MsG0380014628.01.T01:CDS 30.0%
AAAAAGAAACTGTCAGGCAT+GGG + Chr3:57477939-57477958 MsG0380014628.01.T01:CDS 35.0%
AAGCTGAAAAAGAAACTGTC+AGG + Chr3:57477933-57477952 MsG0380014628.01.T01:CDS 35.0%
AATGTTTACCCTACAATGTC+TGG + Chr3:57478308-57478327 MsG0380014628.01.T01:intron 35.0%
AATTGAAACCCAGACATTGT+AGG - Chr3:57478320-57478339 None:intergenic 35.0%
ATGTTTACCCTACAATGTCT+GGG + Chr3:57478309-57478328 MsG0380014628.01.T01:intron 35.0%
ATTGAAACCCAGACATTGTA+GGG - Chr3:57478319-57478338 None:intergenic 35.0%
CAACATTCTAATGAAGCTCT+GGG + Chr3:57478121-57478140 MsG0380014628.01.T01:intron 35.0%
CCTTTATTGCCAAAACATGA+TGG - Chr3:57478347-57478366 None:intergenic 35.0%
CGATGATTTAATGAACCCTA+TGG + Chr3:57478547-57478566 MsG0380014628.01.T01:intron 35.0%
TATTTAGACGAATAGGGAGA+AGG - Chr3:57477551-57477570 None:intergenic 35.0%
TGCTTCCAGTACATAAACTT+TGG - Chr3:57478388-57478407 None:intergenic 35.0%
TTAATAGGTCTTCAGAGATG+TGG + Chr3:57477627-57477646 MsG0380014628.01.T01:intron 35.0%
! GTGAAGCTTCATTCAGTTTT+TGG + Chr3:57477735-57477754 MsG0380014628.01.T01:CDS 35.0%
!!! CCATCATGTTTTGGCAATAA+AGG + Chr3:57478344-57478363 MsG0380014628.01.T01:intron 35.0%
!!! TGACAGTTTCTTTTTCAGCT+TGG - Chr3:57477934-57477953 None:intergenic 35.0%
AAATGGCCATGTTTCAGATC+AGG - Chr3:57477690-57477709 None:intergenic 40.0%
AAGGACTAACCAGCATTCTT+GGG - Chr3:57477532-57477551 None:intergenic 40.0%
AATGGCCATGTTTCAGATCA+GGG - Chr3:57477689-57477708 None:intergenic 40.0%
ACAGCATCTTCTCTTTCTTC+TGG - Chr3:57478173-57478192 None:intergenic 40.0%
AGGAAGCCAATTAACTACCA+GGG + Chr3:57478097-57478116 MsG0380014628.01.T01:intron 40.0%
CAAGCCATTCTCCCATTTAA+TGG + Chr3:57477980-57477999 MsG0380014628.01.T01:CDS 40.0%
CCAACATTCTAATGAAGCTC+TGG + Chr3:57478120-57478139 MsG0380014628.01.T01:intron 40.0%
CCAGAGCTTCATTAGAATGT+TGG - Chr3:57478123-57478142 None:intergenic 40.0%
GAAAAAGAAACTGTCAGGCA+TGG + Chr3:57477938-57477957 MsG0380014628.01.T01:CDS 40.0%
GGCTGAAATTGCTACAACAT+TGG + Chr3:57478001-57478020 MsG0380014628.01.T01:CDS 40.0%
GGTACCCACAAATAAACCTT+GGG + Chr3:57478244-57478263 MsG0380014628.01.T01:intron 40.0%
GTGTCCCAAGGTTTATTTGT+GGG - Chr3:57478251-57478270 None:intergenic 40.0%
TCAGCCATTAAATGGGAGAA+TGG - Chr3:57477987-57478006 None:intergenic 40.0%
TCCTCTTACATTGCTCAACA+TGG + Chr3:57477484-57477503 MsG0380014628.01.T01:CDS 40.0%
TGGAGCCAAAGTTTATGTAC+TGG + Chr3:57478380-57478399 MsG0380014628.01.T01:intron 40.0%
TGGTACCCACAAATAAACCT+TGG + Chr3:57478243-57478262 MsG0380014628.01.T01:intron 40.0%
TTAAATGGGAGAATGGCTTG+TGG - Chr3:57477980-57477999 None:intergenic 40.0%
! CAATTCAGCCCATCATGTTT+TGG + Chr3:57478335-57478354 MsG0380014628.01.T01:intron 40.0%
! CCTTGGTTGTTTCAAAGATG+AGG + Chr3:57478057-57478076 MsG0380014628.01.T01:CDS 40.0%
! CTTGTTGTATGGCCTTAGAT+AGG - Chr3:57478214-57478233 None:intergenic 40.0%
! GTACATAAACTTTGGCTCCA+TGG - Chr3:57478380-57478399 None:intergenic 40.0%
! TAAATGGGAGAATGGCTTGT+GGG - Chr3:57477979-57477998 None:intergenic 40.0%
! TAATTGGCTTCCTGGTAAGA+AGG - Chr3:57478090-57478109 None:intergenic 40.0%
! TCTGAAACATGGCCATTTCT+CGG + Chr3:57477692-57477711 MsG0380014628.01.T01:CDS 40.0%
!! CCTCATCTTTGAAACAACCA+AGG - Chr3:57478060-57478079 None:intergenic 40.0%
AAACATGGCCATTTCTCGGA+TGG + Chr3:57477696-57477715 MsG0380014628.01.T01:CDS 45.0%
AACCAGCATTCTTGGGAATG+AGG - Chr3:57477525-57477544 None:intergenic 45.0%
ACAATGTGAAGAGAGGTCAG+TGG + Chr3:57477437-57477456 MsG0380014628.01.T01:CDS 45.0%
ACATTGTCCTTCTCACAGCA+TGG - Chr3:57477424-57477443 None:intergenic 45.0%
ATAAAGGGGATGCATCACCA+TGG + Chr3:57478360-57478379 MsG0380014628.01.T01:intron 45.0%
CAGGAAGCCAATTAACTACC+AGG + Chr3:57478096-57478115 MsG0380014628.01.T01:intron 45.0%
CTTCATTAGAATGTTGGCCC+TGG - Chr3:57478117-57478136 None:intergenic 45.0%
GAAGGACTAACCAGCATTCT+TGG - Chr3:57477533-57477552 None:intergenic 45.0%
GAGAAGGACAATGTGAAGAG+AGG + Chr3:57477430-57477449 MsG0380014628.01.T01:CDS 45.0%
GCCATGTTGAGCAATGTAAG+AGG - Chr3:57477488-57477507 None:intergenic 45.0%
GGAAAATGGGGATGATTCTG+AGG + Chr3:57478457-57478476 MsG0380014628.01.T01:intron 45.0%
GGGTTCATTAAATCATCGGC+TGG - Chr3:57478545-57478564 None:intergenic 45.0%
GGTGTCCCAAGGTTTATTTG+TGG - Chr3:57478252-57478271 None:intergenic 45.0%
TCGTATTCCATGCTGTGAGA+AGG + Chr3:57477414-57477433 MsG0380014628.01.T01:CDS 45.0%
TGTTGGCCCTGGTAGTTAAT+TGG - Chr3:57478106-57478125 None:intergenic 45.0%
! CTGGTAGTTAATTGGCTTCC+TGG - Chr3:57478098-57478117 None:intergenic 45.0%
!! AAACTGGCTTTGCTGATCCA+TGG - Chr3:57478420-57478439 None:intergenic 45.0%
!! GAGAGCTTGTTATCTTCCTC+AGG - Chr3:57477466-57477485 None:intergenic 45.0%
ACTTGCAGTTGTTGCTGCAG+TGG - Chr3:57478273-57478292 None:intergenic 50.0%
AGAGATGTGGAAAGAGCTGC+AGG + Chr3:57477640-57477659 MsG0380014628.01.T01:CDS 50.0%
CAACTCAGACTGTGTCGTGT+GGG + Chr3:57478514-57478533 MsG0380014628.01.T01:intron 50.0%
CATGTTTCAGATCAGGGCGA+AGG - Chr3:57477683-57477702 None:intergenic 50.0%
CCATTTCTCGGATGGAGAAG+AGG + Chr3:57477704-57477723 MsG0380014628.01.T01:CDS 50.0%
CCTCTTCTCCATCCGAGAAA+TGG - Chr3:57477707-57477726 None:intergenic 50.0%
TCAACTCAGACTGTGTCGTG+TGG + Chr3:57478513-57478532 MsG0380014628.01.T01:intron 50.0%
TTGGCTTCCTGGTAAGAAGG+TGG - Chr3:57478087-57478106 None:intergenic 50.0%
! AGAATGGCTTGTGGGTGACA+GGG - Chr3:57477971-57477990 None:intergenic 50.0%
! CTTCGCCCTGATCTGAAACA+TGG + Chr3:57477681-57477700 MsG0380014628.01.T01:CDS 50.0%
! TGGAAGCACATGCATAGCCA+TGG + Chr3:57478400-57478419 MsG0380014628.01.T01:intron 50.0%
ACATCATTGTCGGTGCGTCC+TGG - Chr3:57477894-57477913 None:intergenic 55.0%
AGGTGCTCCACCTTCTTACC+AGG + Chr3:57478077-57478096 MsG0380014628.01.T01:intron 55.0%
CAACCAAGGCTGCTTCAGCT+AGG - Chr3:57478046-57478065 None:intergenic 55.0%
CGCCTCATTCCCAAGAATGC+TGG + Chr3:57477520-57477539 MsG0380014628.01.T01:CDS 55.0%
CTCAACATGGCACTCGCAAC+TGG + Chr3:57477497-57477516 MsG0380014628.01.T01:CDS 55.0%
GAAAGAGCTGCAGGCTAAGG+TGG + Chr3:57477649-57477668 MsG0380014628.01.T01:CDS 55.0%
GTGGAAAGAGCTGCAGGCTA+AGG + Chr3:57477646-57477665 MsG0380014628.01.T01:CDS 55.0%
TACAACATTGGCACCGCCAC+AGG + Chr3:57478013-57478032 MsG0380014628.01.T01:CDS 55.0%
TCACCTAGCTGAAGCAGCCT+TGG + Chr3:57478040-57478059 MsG0380014628.01.T01:CDS 55.0%
! GAGAATGGCTTGTGGGTGAC+AGG - Chr3:57477972-57477991 None:intergenic 55.0%
GAGAGGTCAGTGGACACCTG+AGG + Chr3:57477447-57477466 MsG0380014628.01.T01:CDS 60.0%
GTTGCTGCAGTGGTGTCCCA+AGG - Chr3:57478263-57478282 None:intergenic 60.0%
TCAGCTAGGTGAGCTGCCTG+TGG - Chr3:57478032-57478051 None:intergenic 60.0%
CTGATAGCAGCGCAGCTGCC+AGG + Chr3:57477873-57477892 MsG0380014628.01.T01:CDS 65.0%
GCTAGGTGAGCTGCCTGTGG+CGG - Chr3:57478029-57478048 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
Chr3 gene 57477409 57478574 57477409 ID=MsG0380014629.01;Name=MsG0380014629.01
Chr3 mRNA 57477409 57478574 57477409 ID=MsG0380014629.01.T01;Parent=MsG0380014629.01;Name=MsG0380014629.01.T01;_AED=0.11;_eAED=0.52;_QI=0|0|0|1|1|1|4|0|287
Chr3 exon 57477409 57477541 57477409 ID=MsG0380014629.01.T01:exon:1656;Parent=MsG0380014629.01.T01
Chr3 exon 57477634 57477763 57477634 ID=MsG0380014629.01.T01:exon:1657;Parent=MsG0380014629.01.T01
Chr3 exon 57477866 57478061 57477866 ID=MsG0380014629.01.T01:exon:1658;Parent=MsG0380014629.01.T01
Chr3 exon 57478170 57478574 57478170 ID=MsG0380014629.01.T01:exon:1659;Parent=MsG0380014629.01.T01
Chr3 CDS 57477409 57477541 57477409 ID=MsG0380014629.01.T01:cds;Parent=MsG0380014629.01.T01
Chr3 CDS 57477634 57477763 57477634 ID=MsG0380014629.01.T01:cds;Parent=MsG0380014629.01.T01
Chr3 CDS 57477866 57478061 57477866 ID=MsG0380014629.01.T01:cds;Parent=MsG0380014629.01.T01
Chr3 CDS 57478170 57478574 57478170 ID=MsG0380014629.01.T01:cds;Parent=MsG0380014629.01.T01
Gene Sequence

>MsG0380014629.01.T01

ATGGGTCGTATTCCATGCTGTGAGAAGGACAATGTGAAGAGAGGTCAGTGGACACCTGAGGAAGATAACAAGCTCTCCTCTTACATTGCTCAACATGGCACTCGCAACTGGCGCCTCATTCCCAAGAATGCTGGTCTTCAGAGATGTGGAAAGAGCTGCAGGCTAAGGTGGACTAATTACCTTCGCCCTGATCTGAAACATGGCCATTTCTCGGATGGAGAAGAGGAAACAATTGTGAAGCTTCATTCAGTTTTTGGTAACAGATGGTCTCTGATAGCAGCGCAGCTGCCAGGACGCACCGACAATGATGTCAAAAATCATTGGAACACCAAGCTGAAAAAGAAACTGTCAGGCATGGGTATAGACCCTGTCACCCACAAGCCATTCTCCCATTTAATGGCTGAAATTGCTACAACATTGGCACCGCCACAGGCAGCTCACCTAGCTGAAGCAGCCTTGCCAGAAGAAAGAGAAGATGCTGTTGAGAAGATTAAGTTTGACCTATCTAAGGCCATACAACAAGAACAAGAAATGGTACCCACAAATAAACCTTGGGACACCACTGCAGCAACAACTGCAAGTTTTGCAATGCCATACAATGTTTACCCTACAATGTCTGGGTTTCAATTCAGCCCATCATGTTTTGGCAATAAAGGGGATGCATCACCATGGAGCCAAAGTTTATGTACTGGAAGCACATGCATAGCCATGGATCAGCAAAGCCAGTTTCATGAAAAACTTGAAGAGGAAAATGGGGATGATTCTGAGGCTACAAAAGAAATTAGAAATCTATCCAATATATTCAACTCAGACTGTGTCGTGTGGGATTTACCAGCCGATGATTTAATGAACCCTATGGTATAA
Protein sequence

>MsG0380014629.01.T01

MGRIPCCEKDNVKRGQWTPEEDNKLSSYIAQHGTRNWRLIPKNAGLQRCGKSCRLRWTNYLRPDLKHGHFSDGEEETIVKLHSVFGNRWSLIAAQLPGRTDNDVKNHWNTKLKKKLSGMGIDPVTHKPFSHLMAEIATTLAPPQAAHLAEAALPEEREDAVEKIKFDLSKAIQQEQEMVPTNKPWDTTAATTASFAMPYNVYPTMSGFQFSPSCFGNKGDASPWSQSLCTGSTCIAMDQQSQFHEKLEEENGDDSEATKEIRNLSNIFNSDCVVWDLPADDLMNPMV*