Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380015210.01.T01 | XP_039687320.1 | 92.208 | 231 | 17 | 1 | 1 | 230 | 12 | 242 | 1.04E-144 | 414 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380015210.01.T01 | Q9FJK3 | 55.072 | 207 | 82 | 3 | 2 | 197 | 13 | 219 | 5.43E-63 | 202 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380015210.01.T01 | G7J8R0 | 92.208 | 231 | 17 | 1 | 1 | 230 | 12 | 242 | 4.99e-145 | 414 |
| Gene ID | Type | Classification |
|---|---|---|
| MsG0380015210.01.T01 | TF | MADS-M-type |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380015210.01.T01 | MTR_3g065100 | 92.208 | 231 | 17 | 1 | 1 | 230 | 12 | 242 | 1.26e-148 | 414 |
| MsG0380015210.01.T01 | MTR_3g466980 | 52.814 | 231 | 80 | 4 | 2 | 225 | 13 | 221 | 8.70e-76 | 228 |
| MsG0380015210.01.T01 | MTR_8g036130 | 54.202 | 238 | 92 | 7 | 1 | 226 | 12 | 244 | 6.97e-72 | 219 |
| MsG0380015210.01.T01 | MTR_4g032620 | 48.018 | 227 | 107 | 4 | 1 | 226 | 12 | 228 | 5.19e-68 | 209 |
| MsG0380015210.01.T01 | MTR_4g031910 | 47.845 | 232 | 98 | 6 | 1 | 226 | 12 | 226 | 1.21e-56 | 180 |
| MsG0380015210.01.T01 | MTR_4g032290 | 48.585 | 212 | 88 | 8 | 21 | 226 | 32 | 228 | 3.93e-52 | 168 |
| MsG0380015210.01.T01 | MTR_3g466830 | 49.664 | 149 | 75 | 0 | 1 | 149 | 11 | 159 | 9.50e-49 | 157 |
| MsG0380015210.01.T01 | MTR_4g032260 | 58.065 | 124 | 51 | 1 | 21 | 143 | 32 | 155 | 2.56e-47 | 154 |
| MsG0380015210.01.T01 | MTR_4g063790 | 49.669 | 151 | 75 | 1 | 3 | 152 | 14 | 164 | 4.89e-46 | 151 |
| MsG0380015210.01.T01 | MTR_2g035610 | 65.766 | 111 | 38 | 0 | 1 | 111 | 12 | 122 | 2.82e-44 | 145 |
| MsG0380015210.01.T01 | MTR_3g467080 | 48.592 | 142 | 72 | 1 | 3 | 143 | 14 | 155 | 6.50e-44 | 145 |
| MsG0380015210.01.T01 | MTR_3g466890 | 47.973 | 148 | 77 | 0 | 1 | 148 | 11 | 158 | 9.00e-44 | 145 |
| MsG0380015210.01.T01 | MTR_5g075380 | 40.000 | 150 | 90 | 0 | 2 | 151 | 13 | 162 | 4.51e-40 | 135 |
| MsG0380015210.01.T01 | MTR_5g047580 | 46.528 | 144 | 76 | 1 | 2 | 145 | 13 | 155 | 7.15e-39 | 132 |
| MsG0380015210.01.T01 | MTR_3g031100 | 43.056 | 144 | 81 | 1 | 1 | 143 | 12 | 155 | 9.15e-38 | 132 |
| MsG0380015210.01.T01 | MTR_3g465410 | 46.429 | 140 | 73 | 2 | 18 | 155 | 1 | 140 | 1.14e-36 | 126 |
| MsG0380015210.01.T01 | MTR_3g466900 | 45.312 | 128 | 70 | 0 | 21 | 148 | 2 | 129 | 2.65e-36 | 125 |
| MsG0380015210.01.T01 | MTR_2g016210 | 39.153 | 189 | 105 | 3 | 2 | 188 | 13 | 193 | 7.18e-36 | 127 |
| MsG0380015210.01.T01 | MTR_1g077390 | 43.151 | 146 | 82 | 1 | 1 | 146 | 12 | 156 | 7.43e-35 | 122 |
| MsG0380015210.01.T01 | MTR_3g466930 | 45.312 | 128 | 70 | 0 | 21 | 148 | 2 | 129 | 1.41e-34 | 120 |
| MsG0380015210.01.T01 | MTR_3g031240 | 39.333 | 150 | 90 | 1 | 2 | 150 | 13 | 162 | 4.63e-34 | 120 |
| MsG0380015210.01.T01 | MTR_1g090697 | 39.583 | 144 | 86 | 1 | 2 | 145 | 13 | 155 | 1.68e-33 | 118 |
| MsG0380015210.01.T01 | MTR_2g035580 | 44.366 | 142 | 79 | 0 | 2 | 143 | 13 | 154 | 7.59e-33 | 117 |
| MsG0380015210.01.T01 | MTR_7g011950 | 46.575 | 146 | 77 | 1 | 1 | 146 | 12 | 156 | 8.32e-33 | 117 |
| MsG0380015210.01.T01 | MTR_1g077320 | 47.586 | 145 | 75 | 1 | 2 | 146 | 13 | 156 | 1.14e-32 | 116 |
| MsG0380015210.01.T01 | MTR_1g084950 | 46.528 | 144 | 76 | 1 | 2 | 145 | 13 | 155 | 3.13e-32 | 115 |
| MsG0380015210.01.T01 | MTR_1g090710 | 37.931 | 145 | 88 | 2 | 2 | 145 | 13 | 156 | 1.70e-31 | 113 |
| MsG0380015210.01.T01 | MTR_1g090783 | 39.716 | 141 | 84 | 1 | 2 | 142 | 12 | 151 | 3.12e-31 | 112 |
| MsG0380015210.01.T01 | MTR_4g028720 | 45.517 | 145 | 78 | 1 | 2 | 146 | 13 | 156 | 5.05e-31 | 112 |
| MsG0380015210.01.T01 | MTR_1g077300 | 45.517 | 145 | 76 | 2 | 2 | 146 | 13 | 154 | 1.01e-27 | 103 |
| MsG0380015210.01.T01 | MTR_4g084780 | 94.000 | 50 | 3 | 0 | 63 | 112 | 1 | 50 | 1.86e-25 | 97.8 |
| MsG0380015210.01.T01 | MTR_7g055800 | 52.809 | 89 | 27 | 1 | 20 | 108 | 18 | 91 | 3.64e-25 | 95.1 |
| MsG0380015210.01.T01 | MTR_4g028800 | 68.966 | 58 | 18 | 0 | 4 | 61 | 13 | 70 | 3.87e-24 | 92.0 |
| MsG0380015210.01.T01 | MTR_5g047560 | 36.806 | 144 | 74 | 2 | 2 | 145 | 13 | 139 | 6.25e-23 | 90.9 |
| MsG0380015210.01.T01 | MTR_4g019670 | 39.252 | 107 | 65 | 0 | 2 | 108 | 16 | 122 | 1.40e-22 | 95.9 |
| MsG0380015210.01.T01 | MTR_6g018920 | 29.741 | 232 | 123 | 9 | 3 | 224 | 14 | 215 | 1.61e-22 | 94.4 |
| MsG0380015210.01.T01 | MTR_7g106510 | 38.318 | 107 | 66 | 0 | 2 | 108 | 16 | 122 | 1.08e-21 | 93.2 |
| MsG0380015210.01.T01 | MTR_7g055790 | 49.000 | 100 | 33 | 1 | 1 | 100 | 70 | 151 | 1.19e-20 | 85.1 |
| MsG0380015210.01.T01 | MTR_2g035590 | 50.562 | 89 | 43 | 1 | 63 | 150 | 1 | 89 | 1.97e-19 | 80.5 |
| MsG0380015210.01.T01 | MTR_3g093900 | 28.082 | 146 | 105 | 0 | 2 | 147 | 16 | 161 | 4.04e-19 | 85.9 |
| MsG0380015210.01.T01 | MTR_1g114730 | 26.050 | 238 | 126 | 8 | 3 | 225 | 14 | 216 | 5.20e-19 | 84.7 |
| MsG0380015210.01.T01 | MTR_7g055940 | 50.000 | 76 | 23 | 1 | 20 | 95 | 18 | 78 | 8.47e-19 | 78.2 |
| MsG0380015210.01.T01 | MTR_6g005450 | 26.724 | 232 | 132 | 8 | 3 | 225 | 14 | 216 | 5.52e-17 | 79.0 |
| MsG0380015210.01.T01 | MTR_6g005440 | 25.862 | 174 | 109 | 6 | 3 | 169 | 14 | 174 | 6.20e-13 | 67.0 |
| MsG0380015210.01.T01 | MTR_2g049610 | 24.779 | 226 | 153 | 7 | 5 | 228 | 16 | 226 | 1.40e-11 | 62.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380015210.01.T01 | AT5G48670 | 55.072 | 207 | 82 | 3 | 2 | 197 | 13 | 219 | 5.54e-64 | 202 |
| MsG0380015210.01.T01 | AT1G65330 | 47.059 | 170 | 90 | 0 | 2 | 171 | 12 | 181 | 1.04e-47 | 159 |
| MsG0380015210.01.T01 | AT1G65300 | 47.333 | 150 | 79 | 0 | 2 | 151 | 12 | 161 | 1.81e-47 | 158 |
| MsG0380015210.01.T01 | AT3G05860 | 44.444 | 171 | 90 | 2 | 2 | 168 | 13 | 182 | 1.90e-42 | 144 |
| MsG0380015210.01.T01 | AT3G05860 | 50.365 | 137 | 68 | 0 | 2 | 138 | 13 | 149 | 2.72e-42 | 142 |
| MsG0380015210.01.T01 | AT3G05860 | 41.489 | 188 | 105 | 2 | 2 | 185 | 13 | 199 | 3.35e-42 | 144 |
| MsG0380015210.01.T01 | AT5G26630 | 45.304 | 181 | 95 | 2 | 2 | 182 | 13 | 189 | 1.69e-40 | 138 |
| MsG0380015210.01.T01 | AT5G27810 | 66.667 | 93 | 31 | 0 | 18 | 110 | 1 | 93 | 3.79e-40 | 134 |
| MsG0380015210.01.T01 | AT5G26650 | 43.333 | 150 | 85 | 0 | 2 | 151 | 11 | 160 | 1.09e-39 | 140 |
| MsG0380015210.01.T01 | AT5G27960 | 42.667 | 150 | 86 | 0 | 2 | 151 | 11 | 160 | 1.22e-38 | 136 |
| MsG0380015210.01.T01 | AT1G31630 | 41.892 | 148 | 85 | 1 | 2 | 149 | 12 | 158 | 1.36e-37 | 134 |
| MsG0380015210.01.T01 | AT1G31640 | 42.466 | 146 | 83 | 1 | 6 | 151 | 16 | 160 | 1.84e-36 | 134 |
| MsG0380015210.01.T01 | AT2G28700 | 33.918 | 171 | 106 | 3 | 1 | 167 | 12 | 179 | 2.57e-29 | 112 |
| MsG0380015210.01.T01 | AT5G26580 | 37.838 | 148 | 78 | 1 | 2 | 149 | 13 | 146 | 5.07e-28 | 109 |
| MsG0380015210.01.T01 | AT1G22590 | 35.211 | 142 | 89 | 1 | 2 | 143 | 13 | 151 | 5.23e-24 | 94.4 |
| MsG0380015210.01.T01 | AT2G40210 | 40.541 | 111 | 66 | 0 | 2 | 112 | 13 | 123 | 1.49e-18 | 83.6 |
| MsG0380015210.01.T01 | AT5G06500 | 35.514 | 107 | 69 | 0 | 2 | 108 | 13 | 119 | 4.60e-17 | 77.8 |
| MsG0380015210.01.T01 | AT5G55690 | 27.551 | 196 | 108 | 5 | 2 | 178 | 13 | 193 | 1.57e-13 | 68.6 |
| MsG0380015210.01.T01 | AT5G55690 | 27.551 | 196 | 108 | 5 | 2 | 178 | 13 | 193 | 1.57e-13 | 68.6 |
| MsG0380015210.01.T01 | AT5G58890 | 29.730 | 148 | 89 | 3 | 2 | 143 | 13 | 151 | 2.80e-12 | 65.1 |
Find 55 sgRNAs with CRISPR-Local
Find 65 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGTCCATTCTCTTCAATCTT+AGG | 0.228194 | 3:+66875802 | None:intergenic |
| TCTATTATCCTTTCTTTGTT+TGG | 0.241148 | 3:+66876041 | None:intergenic |
| GATTTGGCCAAAACCCATTT+GGG | 0.290435 | 3:+66875656 | None:intergenic |
| ATGCTTATATTGTGCATAAC+TGG | 0.326699 | 3:+66875973 | None:intergenic |
| GAAGAAAGGTCTAATGAAAA+AGG | 0.328619 | 3:-66876274 | MsG0380015210.01.T01:CDS |
| CATGGTTGATTTGAATGATA+TGG | 0.333296 | 3:-66875953 | MsG0380015210.01.T01:CDS |
| GAGTCATGGTCAACATGTTT+TGG | 0.338044 | 3:-66875776 | MsG0380015210.01.T01:CDS |
| GGATTTGGCCAAAACCCATT+TGG | 0.342692 | 3:+66875655 | None:intergenic |
| GAATAATAGTGGTGGGGATC+AGG | 0.379125 | 3:-66875704 | MsG0380015210.01.T01:CDS |
| GAGGTTTGGCCGTCTCCTTT+AGG | 0.389676 | 3:-66876180 | MsG0380015210.01.T01:CDS |
| TGGGGATCAGGCACCTCCTA+TGG | 0.395072 | 3:-66875692 | MsG0380015210.01.T01:CDS |
| AATGGTCGTAGCACCAACTA+TGG | 0.416139 | 3:-66875839 | MsG0380015210.01.T01:CDS |
| ACCTCTGGTTGAGGATCATA+AGG | 0.423494 | 3:+66876198 | None:intergenic |
| ATGATCCTCAACCAGAGGTT+TGG | 0.426927 | 3:-66876194 | MsG0380015210.01.T01:CDS |
| AGTATTTGAAAGATATCAAT+AGG | 0.431729 | 3:-66875915 | MsG0380015210.01.T01:CDS |
| GCACCAACTATGGTGGCTAA+TGG | 0.475430 | 3:-66875829 | MsG0380015210.01.T01:CDS |
| AAAGGAGACGGCCAAACCTC+TGG | 0.476094 | 3:+66876183 | None:intergenic |
| GTCTCCTTTAGGAGTTCAAA+GGG | 0.477655 | 3:-66876169 | MsG0380015210.01.T01:CDS |
| CGTCTCCTTTAGGAGTTCAA+AGG | 0.479690 | 3:-66876170 | MsG0380015210.01.T01:CDS |
| ATGAACTTGATGAATAATAG+TGG | 0.484658 | 3:-66875715 | MsG0380015210.01.T01:CDS |
| GGAAGGCAACATTCAAGAAA+AGG | 0.489208 | 3:-66876296 | MsG0380015210.01.T01:CDS |
| TCAATTGACCAAACAAAGAA+AGG | 0.490968 | 3:-66876049 | MsG0380015210.01.T01:CDS |
| TTTGAGGCAGCGGATTCAAA+AGG | 0.492900 | 3:-66876079 | MsG0380015210.01.T01:CDS |
| GGAGGGTTGAAATGTTGAGC+AGG | 0.493102 | 3:-66875894 | MsG0380015210.01.T01:CDS |
| AGGTCAAGGTCAAACTCAAA+TGG | 0.513312 | 3:-66875857 | MsG0380015210.01.T01:CDS |
| AGCACCCTTTGAACTCCTAA+AGG | 0.514637 | 3:+66876165 | None:intergenic |
| GTTGAAATGTTGAGCAGGAA+TGG | 0.522645 | 3:-66875889 | MsG0380015210.01.T01:CDS |
| GTACCTAAGATTGAAGAGAA+TGG | 0.524167 | 3:-66875805 | MsG0380015210.01.T01:CDS |
| GGGGATCAGGCACCTCCTAT+GGG | 0.527561 | 3:-66875691 | MsG0380015210.01.T01:CDS |
| ACTCCATTAGCCACCATAGT+TGG | 0.543974 | 3:+66875826 | None:intergenic |
| AATGAACGACTCTGCGAGGA+AGG | 0.544798 | 3:-66876313 | MsG0380015210.01.T01:CDS |
| TTTGAAAGATATCAATAGGA+GGG | 0.549226 | 3:-66875911 | MsG0380015210.01.T01:CDS |
| AGCAGGAATGGTCAAGGTCA+AGG | 0.553703 | 3:-66875877 | MsG0380015210.01.T01:CDS |
| GAGAATGGACAAGGGAGTCA+TGG | 0.556512 | 3:-66875790 | MsG0380015210.01.T01:CDS |
| ACATTCAAGAAAAGGAAGAA+AGG | 0.560908 | 3:-66876288 | MsG0380015210.01.T01:CDS |
| GACGGCCAAACCTCTGGTTG+AGG | 0.565198 | 3:+66876189 | None:intergenic |
| GGATTGACATTTCCCATAGG+AGG | 0.571905 | 3:+66875679 | None:intergenic |
| ATTTGGCCAAAACCCATTTG+GGG | 0.587386 | 3:+66875657 | None:intergenic |
| TTTGGCCAAAACCCATTTGG+GGG | 0.595235 | 3:+66875658 | None:intergenic |
| ATTTGAAAGATATCAATAGG+AGG | 0.602830 | 3:-66875912 | MsG0380015210.01.T01:CDS |
| TCCTTATGATCCTCAACCAG+AGG | 0.603338 | 3:-66876199 | MsG0380015210.01.T01:CDS |
| GCATAACTGGATCAGCACTA+AGG | 0.605501 | 3:+66875986 | None:intergenic |
| AACTTGATGAATAATAGTGG+TGG | 0.606524 | 3:-66875712 | MsG0380015210.01.T01:CDS |
| AAGATTGAAGAGAATGGACA+AGG | 0.608283 | 3:-66875799 | MsG0380015210.01.T01:CDS |
| AGTGAACTCAGTACTCTATG+TGG | 0.630043 | 3:-66876249 | MsG0380015210.01.T01:CDS |
| AATGGTCAAGGTCAAGGTCA+AGG | 0.636799 | 3:-66875871 | MsG0380015210.01.T01:CDS |
| CTTTGAACTCCTAAAGGAGA+CGG | 0.641014 | 3:+66876171 | None:intergenic |
| AGTTATGCACAATATAAGCA+TGG | 0.643634 | 3:-66875971 | MsG0380015210.01.T01:CDS |
| TTGATTTGAATGATATGGCA+TGG | 0.644556 | 3:-66875948 | MsG0380015210.01.T01:CDS |
| ATGTTGAGCAGGAATGGTCA+AGG | 0.649347 | 3:-66875883 | MsG0380015210.01.T01:CDS |
| GGTCGTAGCACCAACTATGG+TGG | 0.652064 | 3:-66875836 | MsG0380015210.01.T01:CDS |
| ACTTGATGAATAATAGTGGT+GGG | 0.652318 | 3:-66875711 | MsG0380015210.01.T01:CDS |
| CTTGATGAATAATAGTGGTG+GGG | 0.669667 | 3:-66875710 | MsG0380015210.01.T01:CDS |
| TCATAATGAACGACTCTGCG+AGG | 0.671801 | 3:-66876317 | None:intergenic |
| AGATTGAAGAGAATGGACAA+GGG | 0.691703 | 3:-66875798 | MsG0380015210.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AGTATTTGAAAGATATCAAT+AGG | - | Chr3:66876039-66876058 | MsG0380015210.01.T01:CDS | 20.0% |
| ! | ATGAACTTGATGAATAATAG+TGG | - | Chr3:66876239-66876258 | MsG0380015210.01.T01:CDS | 25.0% |
| ! | ATTTGAAAGATATCAATAGG+AGG | - | Chr3:66876042-66876061 | MsG0380015210.01.T01:CDS | 25.0% |
| ! | TCTATTATCCTTTCTTTGTT+TGG | + | Chr3:66875916-66875935 | None:intergenic | 25.0% |
| ! | TTTGAAAGATATCAATAGGA+GGG | - | Chr3:66876043-66876062 | MsG0380015210.01.T01:CDS | 25.0% |
| AACTTGATGAATAATAGTGG+TGG | - | Chr3:66876242-66876261 | MsG0380015210.01.T01:CDS | 30.0% | |
| ACATTCAAGAAAAGGAAGAA+AGG | - | Chr3:66875666-66875685 | MsG0380015210.01.T01:CDS | 30.0% | |
| ACTTGATGAATAATAGTGGT+GGG | - | Chr3:66876243-66876262 | MsG0380015210.01.T01:CDS | 30.0% | |
| AGTTATGCACAATATAAGCA+TGG | - | Chr3:66875983-66876002 | MsG0380015210.01.T01:CDS | 30.0% | |
| ATGCTTATATTGTGCATAAC+TGG | + | Chr3:66875984-66876003 | None:intergenic | 30.0% | |
| ATTGGAACAAAGCAAAAAGA+TGG | - | Chr3:66875836-66875855 | MsG0380015210.01.T01:CDS | 30.0% | |
| GAAGAAAGGTCTAATGAAAA+AGG | - | Chr3:66875680-66875699 | MsG0380015210.01.T01:CDS | 30.0% | |
| TCAATTGACCAAACAAAGAA+AGG | - | Chr3:66875905-66875924 | MsG0380015210.01.T01:CDS | 30.0% | |
| ! | TTGATTTGAATGATATGGCA+TGG | - | Chr3:66876006-66876025 | MsG0380015210.01.T01:CDS | 30.0% |
| !! | CATGGTTGATTTGAATGATA+TGG | - | Chr3:66876001-66876020 | MsG0380015210.01.T01:CDS | 30.0% |
| !! | TTTTTGCTTTGTTCCAATTC+AGG | + | Chr3:66875834-66875853 | None:intergenic | 30.0% |
| AAGATTGAAGAGAATGGACA+AGG | - | Chr3:66876155-66876174 | MsG0380015210.01.T01:CDS | 35.0% | |
| AGATTGAAGAGAATGGACAA+GGG | - | Chr3:66876156-66876175 | MsG0380015210.01.T01:CDS | 35.0% | |
| CTTGATGAATAATAGTGGTG+GGG | - | Chr3:66876244-66876263 | MsG0380015210.01.T01:CDS | 35.0% | |
| GTACCTAAGATTGAAGAGAA+TGG | - | Chr3:66876149-66876168 | MsG0380015210.01.T01:CDS | 35.0% | |
| TGTCCATTCTCTTCAATCTT+AGG | + | Chr3:66876155-66876174 | None:intergenic | 35.0% | |
| ! | GTTCCAATTCAGGCATTTTT+CGG | + | Chr3:66875824-66875843 | None:intergenic | 35.0% |
| !! | ACATGTTTTGGACATGAACA+TGG | - | Chr3:66876190-66876209 | MsG0380015210.01.T01:CDS | 35.0% |
| !!! | TGAACCAAGAGAGTTTTTTG+AGG | - | Chr3:66875859-66875878 | MsG0380015210.01.T01:CDS | 35.0% |
| AGGTCAAGGTCAAACTCAAA+TGG | - | Chr3:66876097-66876116 | MsG0380015210.01.T01:CDS | 40.0% | |
| AGTGAACTCAGTACTCTATG+TGG | - | Chr3:66875705-66875724 | MsG0380015210.01.T01:CDS | 40.0% | |
| ATTTGGCCAAAACCCATTTG+GGG | + | Chr3:66876300-66876319 | None:intergenic | 40.0% | |
| CTTTGAACTCCTAAAGGAGA+CGG | + | Chr3:66875786-66875805 | None:intergenic | 40.0% | |
| GAAATGTCAATCCCCCAAAT+GGG | - | Chr3:66876285-66876304 | MsG0380015210.01.T01:CDS | 40.0% | |
| GATTTGGCCAAAACCCATTT+GGG | + | Chr3:66876301-66876320 | None:intergenic | 40.0% | |
| GGAAGGCAACATTCAAGAAA+AGG | - | Chr3:66875658-66875677 | MsG0380015210.01.T01:CDS | 40.0% | |
| GTTCCGAAAAATGCCTGAAT+TGG | - | Chr3:66875818-66875837 | MsG0380015210.01.T01:CDS | 40.0% | |
| GTTGAAATGTTGAGCAGGAA+TGG | - | Chr3:66876065-66876084 | MsG0380015210.01.T01:CDS | 40.0% | |
| ! | GAGTCATGGTCAACATGTTT+TGG | - | Chr3:66876178-66876197 | MsG0380015210.01.T01:CDS | 40.0% |
| ! | GTCTCCTTTAGGAGTTCAAA+GGG | - | Chr3:66875785-66875804 | MsG0380015210.01.T01:CDS | 40.0% |
| !!! | AAGAGAGTTTTTTGAGGCAG+CGG | - | Chr3:66875865-66875884 | MsG0380015210.01.T01:CDS | 40.0% |
| AATGGTCAAGGTCAAGGTCA+AGG | - | Chr3:66876083-66876102 | MsG0380015210.01.T01:CDS | 45.0% | |
| AATGGTCGTAGCACCAACTA+TGG | - | Chr3:66876115-66876134 | MsG0380015210.01.T01:CDS | 45.0% | |
| ACCTCTGGTTGAGGATCATA+AGG | + | Chr3:66875759-66875778 | None:intergenic | 45.0% | |
| ACTCCATTAGCCACCATAGT+TGG | + | Chr3:66876131-66876150 | None:intergenic | 45.0% | |
| AGCACCCTTTGAACTCCTAA+AGG | + | Chr3:66875792-66875811 | None:intergenic | 45.0% | |
| ATGATCCTCAACCAGAGGTT+TGG | - | Chr3:66875760-66875779 | MsG0380015210.01.T01:CDS | 45.0% | |
| ATGTTGAGCAGGAATGGTCA+AGG | - | Chr3:66876071-66876090 | MsG0380015210.01.T01:CDS | 45.0% | |
| GCATAACTGGATCAGCACTA+AGG | + | Chr3:66875971-66875990 | None:intergenic | 45.0% | |
| GCTGCCTCAAAAAACTCTCT+TGG | + | Chr3:66875866-66875885 | None:intergenic | 45.0% | |
| GGAAATGTCAATCCCCCAAA+TGG | - | Chr3:66876284-66876303 | MsG0380015210.01.T01:CDS | 45.0% | |
| GGATTGACATTTCCCATAGG+AGG | + | Chr3:66876278-66876297 | None:intergenic | 45.0% | |
| GGATTTGGCCAAAACCCATT+TGG | + | Chr3:66876302-66876321 | None:intergenic | 45.0% | |
| TCCTTATGATCCTCAACCAG+AGG | - | Chr3:66875755-66875774 | MsG0380015210.01.T01:CDS | 45.0% | |
| TTTGGCCAAAACCCATTTGG+GGG | + | Chr3:66876299-66876318 | None:intergenic | 45.0% | |
| ! | CGTCTCCTTTAGGAGTTCAA+AGG | - | Chr3:66875784-66875803 | MsG0380015210.01.T01:CDS | 45.0% |
| ! | GAATAATAGTGGTGGGGATC+AGG | - | Chr3:66876250-66876269 | MsG0380015210.01.T01:CDS | 45.0% |
| ! | TTTGAGGCAGCGGATTCAAA+AGG | - | Chr3:66875875-66875894 | MsG0380015210.01.T01:CDS | 45.0% |
| !! | TCAATCCCCCAAATGGGTTT+TGG | - | Chr3:66876291-66876310 | MsG0380015210.01.T01:CDS | 45.0% |
| AGCAGGAATGGTCAAGGTCA+AGG | - | Chr3:66876077-66876096 | MsG0380015210.01.T01:CDS | 50.0% | |
| GAGAATGGACAAGGGAGTCA+TGG | - | Chr3:66876164-66876183 | MsG0380015210.01.T01:CDS | 50.0% | |
| GCACCAACTATGGTGGCTAA+TGG | - | Chr3:66876125-66876144 | MsG0380015210.01.T01:CDS | 50.0% | |
| GGAGGGTTGAAATGTTGAGC+AGG | - | Chr3:66876060-66876079 | MsG0380015210.01.T01:CDS | 50.0% | |
| GGGGGATTGACATTTCCCAT+AGG | + | Chr3:66876281-66876300 | None:intergenic | 50.0% | |
| AAAGGAGACGGCCAAACCTC+TGG | + | Chr3:66875774-66875793 | None:intergenic | 55.0% | |
| GAGGTTTGGCCGTCTCCTTT+AGG | - | Chr3:66875774-66875793 | MsG0380015210.01.T01:CDS | 55.0% | |
| GGTCGTAGCACCAACTATGG+TGG | - | Chr3:66876118-66876137 | MsG0380015210.01.T01:CDS | 55.0% | |
| GACGGCCAAACCTCTGGTTG+AGG | + | Chr3:66875768-66875787 | None:intergenic | 60.0% | |
| GGGGATCAGGCACCTCCTAT+GGG | - | Chr3:66876263-66876282 | MsG0380015210.01.T01:CDS | 60.0% | |
| TGGGGATCAGGCACCTCCTA+TGG | - | Chr3:66876262-66876281 | MsG0380015210.01.T01:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr3 | gene | 66875642 | 66876334 | 66875642 | ID=MsG0380015210.01;Name=MsG0380015210.01 |
| Chr3 | mRNA | 66875642 | 66876334 | 66875642 | ID=MsG0380015210.01.T01;Parent=MsG0380015210.01;Name=MsG0380015210.01.T01;_AED=0.49;_eAED=0.49;_QI=0|-1|0|1|-1|1|1|0|230 |
| Chr3 | exon | 66875642 | 66876334 | 66875642 | ID=MsG0380015210.01.T01:exon:13507;Parent=MsG0380015210.01.T01 |
| Chr3 | CDS | 66875642 | 66876334 | 66875642 | ID=MsG0380015210.01.T01:cds;Parent=MsG0380015210.01.T01 |
| Gene Sequence |
| Protein sequence |
