AlfalfaGEDB | MsG0380015433.01

M. sativa cultivar ZhongmuNo.1 / MsG0380015433.01

KEGG: -
GO: GO:0003677 GO:0006355
PFAM: PF02365

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0380015433.01.T01	RHN68355.1	63.704	270	35	3	23	250	2	250	1.25E-109	328

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0380015433.01.T01	Q9FLJ2	74.545	110	27	1	55	164	64	172	1.03E-54	182

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0380015433.01.T01	A0A396IWF9	63.704	270	35	3	23	250	2	250	5.99e-110	328

TFs/TRs:

Gene ID	Type	Classification
MsG0380015433.01.T01	TF	NAC

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0380015433.01.T01	MTR_3g070030	67.782	239	35	2	54	250	66	304	2.83e-109	319
MsG0380015433.01.T01	MTR_3g070040	59.191	272	31	4	18	246	53	287	1.89e-98	291
MsG0380015433.01.T01	MTR_7g011120	66.341	205	36	3	54	225	55	259	3.66e-88	264
MsG0380015433.01.T01	MTR_7g011130	56.275	247	45	2	54	237	66	312	3.98e-88	265
MsG0380015433.01.T01	MTR_4g108760	76.147	109	25	1	56	164	66	173	4.66e-56	183
MsG0380015433.01.T01	MTR_6g012670	73.874	111	28	1	56	166	69	178	2.68e-54	177
MsG0380015433.01.T01	MTR_3g435150	71.560	109	30	1	56	164	65	172	1.20e-51	170
MsG0380015433.01.T01	MTR_2g078700	69.643	112	31	2	53	162	69	179	5.22e-49	166
MsG0380015433.01.T01	MTR_6g032770	67.857	112	33	2	56	165	67	177	4.52e-48	163
MsG0380015433.01.T01	MTR_7g085260	69.027	113	30	3	56	164	66	177	6.94e-48	162
MsG0380015433.01.T01	MTR_6g084430	67.890	109	30	2	56	164	54	157	2.13e-46	157
MsG0380015433.01.T01	MTR_1g008740	64.348	115	35	2	56	168	63	173	1.04e-43	151
MsG0380015433.01.T01	MTR_1g008740	64.348	115	35	2	56	168	77	187	1.19e-43	151
MsG0380015433.01.T01	MTR_3g109340	63.964	111	34	2	56	164	71	177	2.55e-43	150
MsG0380015433.01.T01	MTR_3g109340	63.063	111	34	2	56	164	71	176	4.46e-42	147
MsG0380015433.01.T01	MTR_3g116070	70.330	91	25	1	53	141	70	160	1.43e-39	140
MsG0380015433.01.T01	MTR_4g081870	40.104	192	99	4	53	242	55	232	1.63e-38	135
MsG0380015433.01.T01	MTR_3g093040	44.805	154	71	3	57	203	160	306	1.30e-37	134
MsG0380015433.01.T01	MTR_3g093050	60.396	101	37	1	60	160	77	174	5.98e-37	137
MsG0380015433.01.T01	MTR_3g093050	60.396	101	37	1	60	160	77	174	6.38e-37	137
MsG0380015433.01.T01	MTR_5g041940	53.571	112	51	1	53	163	49	160	6.93e-37	131
MsG0380015433.01.T01	MTR_8g059170	53.211	109	50	1	56	164	63	170	4.12e-36	130
MsG0380015433.01.T01	MTR_4g101680	54.955	111	36	3	54	158	54	156	5.91e-36	131
MsG0380015433.01.T01	MTR_8g094580	48.889	135	61	3	53	183	53	183	7.03e-36	129
MsG0380015433.01.T01	MTR_4g035590	51.049	143	55	5	54	190	55	188	7.37e-36	130
MsG0380015433.01.T01	MTR_8g024480	51.145	131	54	4	54	174	62	192	8.49e-36	132
MsG0380015433.01.T01	MTR_5g069030	54.955	111	40	2	60	163	80	187	9.35e-36	134
MsG0380015433.01.T01	MTR_2g064470	57.009	107	44	1	53	159	55	159	1.20e-35	129
MsG0380015433.01.T01	MTR_8g094580	48.872	133	60	3	55	183	1	129	1.79e-35	126
MsG0380015433.01.T01	MTR_4g036030	52.500	120	49	3	54	170	54	168	2.02e-35	129
MsG0380015433.01.T01	MTR_5g012080	55.046	109	41	3	54	158	54	158	4.91e-35	128
MsG0380015433.01.T01	MTR_8g063550	47.826	115	56	2	59	173	60	170	2.51e-34	126
MsG0380015433.01.T01	MTR_1g096430	53.153	111	38	3	54	158	54	156	2.51e-34	126
MsG0380015433.01.T01	MTR_8g076110	57.732	97	36	2	62	158	64	155	2.64e-34	125
MsG0380015433.01.T01	MTR_2g062730	56.190	105	40	3	60	163	66	165	2.94e-34	126
MsG0380015433.01.T01	MTR_8g063550	47.826	115	56	2	59	173	60	170	2.99e-34	127
MsG0380015433.01.T01	MTR_3g088110	53.846	104	47	1	55	158	55	157	4.07e-34	124
MsG0380015433.01.T01	MTR_8g063550	47.826	115	56	2	59	173	60	170	4.77e-34	127
MsG0380015433.01.T01	MTR_1g097300	41.463	164	79	5	57	215	71	222	7.54e-34	128
MsG0380015433.01.T01	MTR_1g069805	51.261	119	46	3	53	169	56	164	9.35e-34	123
MsG0380015433.01.T01	MTR_7g100990	44.872	156	80	4	56	205	60	215	1.90e-33	124
MsG0380015433.01.T01	MTR_5g021710	57.143	98	37	2	62	159	66	158	2.39e-33	124
MsG0380015433.01.T01	MTR_2g079990	49.123	114	55	1	51	164	60	170	5.30e-33	123
MsG0380015433.01.T01	MTR_0036s0150	52.174	115	50	2	57	171	58	167	5.49e-33	125
MsG0380015433.01.T01	MTR_6g477900	45.775	142	68	3	60	195	61	199	7.90e-33	120
MsG0380015433.01.T01	MTR_7g085220	41.615	161	74	5	14	162	21	173	1.03e-32	122
MsG0380015433.01.T01	MTR_3g096920	52.830	106	49	1	53	158	53	157	1.61e-32	120
MsG0380015433.01.T01	MTR_3g096140	45.528	123	63	2	50	172	52	170	1.87e-32	120
MsG0380015433.01.T01	MTR_2g080010	46.094	128	57	3	56	173	64	189	3.75e-32	120
MsG0380015433.01.T01	MTR_3g096140	45.528	123	63	2	50	172	31	149	5.95e-32	120
MsG0380015433.01.T01	MTR_3g096140	45.528	123	63	2	50	172	52	170	6.79e-32	120
MsG0380015433.01.T01	MTR_8g093580	42.748	131	64	3	42	172	50	169	9.83e-32	122
MsG0380015433.01.T01	MTR_4g089135	45.455	132	42	4	56	161	64	191	1.02e-31	119
MsG0380015433.01.T01	MTR_5g014300	37.629	194	90	5	60	233	61	243	1.39e-31	119
MsG0380015433.01.T01	MTR_3g064580	44.615	130	70	1	60	189	61	188	1.60e-31	122
MsG0380015433.01.T01	MTR_7g097090	52.830	106	41	2	53	156	56	154	3.03e-31	117
MsG0380015433.01.T01	MTR_1g090723	42.857	147	69	4	29	171	36	171	4.48e-31	121
MsG0380015433.01.T01	MTR_7g005280	52.586	116	43	4	60	173	65	170	4.57e-31	115
MsG0380015433.01.T01	MTR_1g090723	42.857	147	68	4	29	171	36	170	4.66e-31	120
MsG0380015433.01.T01	MTR_1g090723	42.857	147	68	4	29	171	36	170	5.37e-31	120
MsG0380015433.01.T01	MTR_2157s0010	45.324	139	64	4	56	183	57	194	8.71e-31	115
MsG0380015433.01.T01	MTR_2g064090	54.369	103	37	2	60	158	61	157	1.81e-30	116
MsG0380015433.01.T01	MTR_5g076850	42.038	157	85	2	60	213	61	214	1.85e-30	119
MsG0380015433.01.T01	MTR_5g040420	46.218	119	57	3	54	165	61	179	1.70e-29	114
MsG0380015433.01.T01	MTR_8g467490	44.167	120	59	2	54	165	61	180	1.78e-29	114
MsG0380015433.01.T01	MTR_6g011860	45.690	116	52	3	54	160	62	175	2.07e-29	114
MsG0380015433.01.T01	MTR_2g079990	62.338	77	29	0	56	132	65	141	6.66e-29	112
MsG0380015433.01.T01	MTR_4g098630	47.059	119	56	3	60	174	61	176	6.87e-29	111
MsG0380015433.01.T01	MTR_3g096920	62.500	80	29	1	53	132	53	131	1.09e-28	111
MsG0380015433.01.T01	MTR_2g093810	51.923	104	47	2	58	158	65	168	1.78e-28	110
MsG0380015433.01.T01	MTR_4g075980	54.118	85	36	1	55	136	63	147	2.15e-26	104
MsG0380015433.01.T01	MTR_2g086880	59.420	69	28	0	62	130	74	142	4.08e-26	106
MsG0380015433.01.T01	MTR_4g134460	48.571	105	48	2	55	158	102	201	4.62e-26	105
MsG0380015433.01.T01	MTR_2g086880	59.420	69	28	0	62	130	74	142	4.83e-26	106
MsG0380015433.01.T01	MTR_2g068880	45.378	119	52	3	59	165	75	192	1.66e-25	102
MsG0380015433.01.T01	MTR_2g068920	40.000	145	72	3	59	191	74	215	6.00e-25	100
MsG0380015433.01.T01	MTR_1g090720	48.624	109	53	1	57	162	94	202	1.12e-24	102
MsG0380015433.01.T01	MTR_7g070140	48.936	94	43	2	60	148	17	110	1.14e-24	95.9
MsG0380015433.01.T01	MTR_5g090970	37.333	150	73	3	58	198	68	205	7.27e-24	97.8
MsG0380015433.01.T01	MTR_5g090970	36.129	155	78	3	53	198	64	206	7.54e-24	97.8
MsG0380015433.01.T01	MTR_8g099750	39.535	129	68	4	60	184	65	187	9.60e-23	93.2
MsG0380015433.01.T01	MTR_7g105170	36.496	137	83	4	56	188	58	194	3.92e-21	89.7
MsG0380015433.01.T01	MTR_3g098810	38.406	138	70	5	59	189	64	193	5.07e-21	89.0
MsG0380015433.01.T01	MTR_8g023840	51.807	83	37	3	50	130	57	138	5.47e-20	88.6
MsG0380015433.01.T01	MTR_2g086690	48.101	79	40	1	54	131	57	135	6.78e-20	85.9
MsG0380015433.01.T01	MTR_8g023860	51.282	78	35	3	55	130	63	139	3.90e-19	86.3
MsG0380015433.01.T01	MTR_3g098810	47.436	78	37	1	59	132	64	141	1.11e-18	80.9
MsG0380015433.01.T01	MTR_4g052620	46.835	79	41	1	54	131	57	135	1.64e-18	82.4
MsG0380015433.01.T01	MTR_8g023930	48.718	78	37	3	55	130	75	151	3.53e-16	77.8
MsG0380015433.01.T01	MTR_8g023900	50.000	76	35	3	57	130	246	320	5.85e-16	77.0
MsG0380015433.01.T01	MTR_8g023900	46.053	76	38	3	57	130	65	139	3.19e-14	72.0
MsG0380015433.01.T01	MTR_4g094302	36.283	113	59	3	62	169	66	170	6.30e-16	73.9
MsG0380015433.01.T01	MTR_2g064730	71.429	49	13	1	172	219	26	74	5.15e-14	66.2
MsG0380015433.01.T01	MTR_4g094302	42.466	73	32	2	62	132	66	130	1.31e-13	67.0
MsG0380015433.01.T01	MTR_3g096400	37.037	108	51	4	59	157	61	160	3.69e-12	63.9
MsG0380015433.01.T01	MTR_7g070150	43.836	73	29	2	99	168	4	67	5.39e-12	60.8

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0380015433.01.T01	AT5G61430	74.545	110	27	1	55	164	1	109	7.77e-57	182
MsG0380015433.01.T01	AT5G61430	74.545	110	27	1	55	164	64	172	1.05e-55	182
MsG0380015433.01.T01	AT5G07680	74.312	109	27	1	56	164	52	159	1.61e-54	178
MsG0380015433.01.T01	AT5G07680	74.312	109	27	1	56	164	66	173	2.71e-54	178
MsG0380015433.01.T01	AT5G39610	74.312	109	27	1	56	164	69	176	2.84e-52	171
MsG0380015433.01.T01	AT3G04060	49.254	201	83	7	53	250	66	250	4.58e-50	167
MsG0380015433.01.T01	AT3G29035	72.477	109	29	1	56	164	73	180	1.11e-49	166
MsG0380015433.01.T01	AT5G18270	73.585	106	26	2	56	160	70	174	3.94e-49	165
MsG0380015433.01.T01	AT5G18270	73.585	106	26	2	56	160	70	174	4.52e-49	164
MsG0380015433.01.T01	AT5G53950	73.333	105	25	2	56	158	66	169	3.30e-47	160
MsG0380015433.01.T01	AT3G18400	66.055	109	33	1	56	164	54	158	4.10e-46	156
MsG0380015433.01.T01	AT1G76420	66.667	108	30	2	53	158	68	171	2.01e-43	150
MsG0380015433.01.T01	AT3G15170	68.269	104	30	2	54	155	67	169	1.43e-42	147
MsG0380015433.01.T01	AT2G24430	64.035	114	35	2	53	164	62	171	1.98e-42	147
MsG0380015433.01.T01	AT2G24430	64.035	114	35	2	53	164	62	171	1.98e-42	147
MsG0380015433.01.T01	AT3G12977	53.719	121	54	1	46	166	4	122	5.17e-40	138
MsG0380015433.01.T01	AT1G56010	56.250	112	41	2	55	162	1	108	3.82e-38	134
MsG0380015433.01.T01	AT3G12977	45.946	148	72	2	25	166	30	175	5.90e-38	134
MsG0380015433.01.T01	AT4G35580	58.654	104	40	1	57	160	61	161	6.76e-38	139
MsG0380015433.01.T01	AT4G35580	58.654	104	40	1	57	160	61	161	8.99e-38	139
MsG0380015433.01.T01	AT4G35580	58.654	104	40	1	57	160	61	161	9.56e-38	139
MsG0380015433.01.T01	AT4G10350	56.303	119	45	3	45	160	1	115	1.18e-37	134
MsG0380015433.01.T01	AT1G56010	55.263	114	43	2	53	162	66	175	1.31e-37	134
MsG0380015433.01.T01	AT2G46770	49.593	123	49	2	54	163	63	185	8.17e-37	133
MsG0380015433.01.T01	AT1G62700	54.955	111	36	3	54	158	54	156	8.82e-36	131
MsG0380015433.01.T01	AT1G62700	54.955	111	36	3	54	158	54	156	8.82e-36	131
MsG0380015433.01.T01	AT1G12260	52.542	118	48	3	54	168	54	166	1.02e-35	130
MsG0380015433.01.T01	AT1G77450	51.327	113	54	1	53	165	56	167	1.14e-35	127
MsG0380015433.01.T01	AT4G10350	58.182	110	40	2	54	160	56	162	1.15e-35	130
MsG0380015433.01.T01	AT1G69490	46.763	139	67	2	53	190	55	187	1.17e-35	128
MsG0380015433.01.T01	AT1G12260	52.542	118	48	3	54	168	54	166	1.36e-35	130
MsG0380015433.01.T01	AT1G33060	57.843	102	40	1	57	158	76	174	3.04e-35	133
MsG0380015433.01.T01	AT1G33060	57.843	102	40	1	57	158	76	174	3.15e-35	133
MsG0380015433.01.T01	AT3G61910	46.429	140	62	4	54	180	58	197	4.45e-35	128
MsG0380015433.01.T01	AT5G62380	50.413	121	49	3	60	174	63	178	9.56e-35	127
MsG0380015433.01.T01	AT5G62380	50.413	121	49	3	60	174	63	178	9.56e-35	127
MsG0380015433.01.T01	AT2G18060	54.286	105	43	2	62	166	67	166	1.63e-34	127
MsG0380015433.01.T01	AT2G18060	54.286	105	43	2	62	166	67	166	1.63e-34	127
MsG0380015433.01.T01	AT1G71930	56.701	97	37	2	62	158	67	158	2.00e-34	126
MsG0380015433.01.T01	AT1G71930	56.701	97	37	2	62	158	67	158	2.00e-34	126
MsG0380015433.01.T01	AT4G36160	58.763	97	35	2	62	158	68	159	2.72e-34	127
MsG0380015433.01.T01	AT4G36160	58.763	97	35	2	62	158	68	159	2.72e-34	127
MsG0380015433.01.T01	AT4G36160	58.763	97	35	2	62	158	72	163	2.76e-34	127
MsG0380015433.01.T01	AT3G15500	52.174	115	52	2	51	165	58	169	6.74e-34	124
MsG0380015433.01.T01	AT3G10480	46.358	151	62	4	25	162	71	215	1.09e-33	127
MsG0380015433.01.T01	AT1G52890	52.174	115	52	2	51	165	58	169	1.16e-33	124
MsG0380015433.01.T01	AT1G33280	58.586	99	35	2	62	160	66	158	1.92e-33	123
MsG0380015433.01.T01	AT5G66300	51.852	108	45	2	54	158	59	162	3.65e-33	122
MsG0380015433.01.T01	AT5G63790	54.955	111	41	3	53	158	96	202	3.79e-33	122
MsG0380015433.01.T01	AT5G63790	54.955	111	41	3	53	158	106	212	4.04e-33	122
MsG0380015433.01.T01	AT3G10480	54.310	116	45	3	49	162	72	181	4.06e-33	125
MsG0380015433.01.T01	AT5G08790	51.754	114	52	2	53	164	53	165	7.52e-33	121
MsG0380015433.01.T01	AT5G04410	51.282	117	49	3	57	171	61	171	7.88e-33	125
MsG0380015433.01.T01	AT3G10480	53.846	117	45	3	49	162	72	182	1.12e-32	124
MsG0380015433.01.T01	AT1G01720	50.000	112	54	2	55	165	55	165	1.35e-32	120
MsG0380015433.01.T01	AT4G27410	55.660	106	38	3	56	158	63	162	1.56e-32	120
MsG0380015433.01.T01	AT4G27410	42.529	174	82	6	52	221	76	235	2.05e-32	120
MsG0380015433.01.T01	AT3G10500	50.435	115	53	2	57	171	61	171	2.90e-32	124
MsG0380015433.01.T01	AT3G10490	54.783	115	47	3	51	164	74	184	2.95e-32	118
MsG0380015433.01.T01	AT1G79580	56.863	102	37	3	60	160	73	168	3.49e-32	121
MsG0380015433.01.T01	AT1G79580	56.863	102	37	3	60	160	73	168	3.49e-32	121
MsG0380015433.01.T01	AT1G79580	56.863	102	37	3	60	160	73	168	3.49e-32	121
MsG0380015433.01.T01	AT1G79580	56.863	102	37	3	60	160	73	168	3.49e-32	121
MsG0380015433.01.T01	AT1G79580	56.863	102	37	3	60	160	73	168	3.49e-32	121
MsG0380015433.01.T01	AT4G28530	52.778	108	42	2	53	158	72	172	7.39e-32	120
MsG0380015433.01.T01	AT1G65910	51.327	113	50	2	60	171	61	169	7.45e-32	123
MsG0380015433.01.T01	AT3G04070	54.867	113	40	4	56	158	59	170	7.85e-32	120
MsG0380015433.01.T01	AT3G15510	45.161	124	58	2	56	169	66	189	8.51e-32	120
MsG0380015433.01.T01	AT2G33480	56.000	100	39	2	60	158	8	103	9.70e-32	116
MsG0380015433.01.T01	AT3G10490	54.783	115	47	3	49	162	72	182	9.76e-32	121
MsG0380015433.01.T01	AT5G46590	55.670	97	40	2	60	155	61	155	1.03e-31	118
MsG0380015433.01.T01	AT1G32770	46.721	122	58	1	55	169	67	188	1.06e-31	119
MsG0380015433.01.T01	AT3G17730	53.000	100	44	1	60	159	61	157	1.51e-31	117
MsG0380015433.01.T01	AT5G13180	41.892	148	77	3	22	164	23	166	2.22e-31	116
MsG0380015433.01.T01	AT1G61110	51.327	113	45	3	56	158	65	177	2.50e-31	118
MsG0380015433.01.T01	AT3G49530	51.923	104	46	2	57	159	65	165	3.94e-31	119
MsG0380015433.01.T01	AT2G33480	56.000	100	39	2	60	158	65	160	4.41e-31	116
MsG0380015433.01.T01	AT2G33480	56.566	99	38	2	60	158	65	158	4.64e-31	116
MsG0380015433.01.T01	AT3G03200	57.000	100	39	2	60	158	61	157	4.69e-31	120
MsG0380015433.01.T01	AT3G49530	51.923	104	46	2	57	159	65	165	6.44e-31	119
MsG0380015433.01.T01	AT5G46590	60.494	81	31	1	60	139	61	141	7.68e-31	115
MsG0380015433.01.T01	AT5G17260	57.000	100	39	2	60	158	61	157	1.26e-30	119
MsG0380015433.01.T01	AT5G24590	35.450	189	90	5	55	217	63	245	1.99e-30	117
MsG0380015433.01.T01	AT5G64060	40.833	120	67	2	59	178	60	175	2.72e-30	116
MsG0380015433.01.T01	AT5G09330	35.185	162	97	3	57	218	58	211	6.32e-30	117
MsG0380015433.01.T01	AT5G09330	35.185	162	97	3	57	218	58	211	6.32e-30	117
MsG0380015433.01.T01	AT5G09330	35.185	162	97	3	57	218	58	211	6.32e-30	117
MsG0380015433.01.T01	AT5G09330	35.185	162	97	3	57	218	58	211	6.32e-30	117
MsG0380015433.01.T01	AT5G09330	35.185	162	97	3	57	218	58	211	6.32e-30	117
MsG0380015433.01.T01	AT1G34190	46.154	117	59	2	55	171	66	178	7.40e-30	117
MsG0380015433.01.T01	AT5G22290	55.000	80	36	0	60	139	75	154	1.32e-29	114
MsG0380015433.01.T01	AT3G04070	45.312	128	45	3	56	158	59	186	1.65e-29	114
MsG0380015433.01.T01	AT1G54330	53.704	108	44	1	60	167	61	162	1.32e-28	110
MsG0380015433.01.T01	AT2G27300	58.667	75	31	0	60	134	68	142	1.57e-28	110
MsG0380015433.01.T01	AT1G34180	44.444	117	61	2	55	171	78	190	2.50e-28	112
MsG0380015433.01.T01	AT1G34180	44.444	117	61	2	55	171	66	178	2.58e-28	112
MsG0380015433.01.T01	AT4G17980	51.456	103	45	3	60	159	61	161	2.76e-28	108
MsG0380015433.01.T01	AT5G39820	35.326	184	95	5	54	215	67	248	3.14e-28	110
MsG0380015433.01.T01	AT1G32510	50.000	106	44	2	60	158	61	164	4.19e-28	108
MsG0380015433.01.T01	AT1G34180	44.444	117	61	2	55	171	78	190	5.00e-28	112
MsG0380015433.01.T01	AT1G34180	44.444	117	61	2	55	171	66	178	5.12e-28	112
MsG0380015433.01.T01	AT4G17980	51.456	103	45	3	60	159	61	161	5.15e-28	108
MsG0380015433.01.T01	AT1G26870	44.828	116	56	2	53	160	62	177	1.89e-27	109
MsG0380015433.01.T01	AT2G02450	43.704	135	65	4	55	188	99	223	2.28e-27	108
MsG0380015433.01.T01	AT2G02450	43.704	135	65	4	55	188	99	223	3.39e-27	108
MsG0380015433.01.T01	AT3G44290	55.128	78	35	0	60	137	68	145	3.67e-27	105
MsG0380015433.01.T01	AT2G43000	31.472	197	95	5	55	227	66	246	3.88e-27	105
MsG0380015433.01.T01	AT1G52880	33.654	208	88	6	56	214	66	272	5.56e-27	106
MsG0380015433.01.T01	AT3G44290	54.430	79	36	0	60	138	68	146	1.03e-26	106
MsG0380015433.01.T01	AT2G17040	54.762	84	35	1	55	135	54	137	2.06e-26	103
MsG0380015433.01.T01	AT3G10490	61.905	84	28	2	80	162	2	82	7.44e-25	101
MsG0380015433.01.T01	AT3G10490	61.905	84	28	2	80	162	2	82	7.44e-25	101
MsG0380015433.01.T01	AT1G32870	44.628	121	55	4	55	171	60	172	1.64e-24	102
MsG0380015433.01.T01	AT1G32870	44.628	121	55	4	55	171	60	172	1.94e-24	102
MsG0380015433.01.T01	AT1G32870	44.628	121	55	4	55	171	96	208	2.01e-24	102
MsG0380015433.01.T01	AT3G12910	34.783	184	92	7	60	215	75	258	2.49e-22	93.6
MsG0380015433.01.T01	AT2G18060	50.000	82	36	2	85	166	2	78	1.26e-21	91.3
MsG0380015433.01.T01	AT5G22380	35.119	168	98	6	59	217	62	227	3.41e-21	89.4
MsG0380015433.01.T01	AT2G43000	41.758	91	51	1	68	158	1	89	1.75e-19	84.0
MsG0380015433.01.T01	AT3G44350	50.667	75	35	2	59	131	61	135	3.91e-19	82.0
MsG0380015433.01.T01	AT3G44350	50.667	75	35	2	59	131	61	135	6.74e-19	83.2
MsG0380015433.01.T01	AT5G22290	57.407	54	23	0	86	139	2	55	8.39e-18	80.1
MsG0380015433.01.T01	AT5G04395	40.678	118	62	3	21	135	60	172	1.07e-17	79.0
MsG0380015433.01.T01	AT4G01550	50.633	79	36	2	57	132	57	135	2.02e-17	81.3
MsG0380015433.01.T01	AT3G04420	45.946	74	40	0	57	130	57	130	8.80e-17	78.2
MsG0380015433.01.T01	AT3G04420	45.946	74	40	0	57	130	57	130	1.84e-16	77.8
MsG0380015433.01.T01	AT4G01540	47.368	76	37	2	60	132	61	136	2.49e-16	78.2
MsG0380015433.01.T01	AT4G01540	47.368	76	37	2	60	132	61	136	2.66e-16	78.2
MsG0380015433.01.T01	AT4G01540	47.368	76	37	2	60	132	61	136	2.81e-16	78.2
MsG0380015433.01.T01	AT4G01540	47.368	76	37	2	60	132	61	136	2.94e-16	77.8
MsG0380015433.01.T01	AT4G01520	44.737	76	39	2	60	132	61	136	1.69e-15	74.7
MsG0380015433.01.T01	AT1G02230	45.238	84	40	3	50	130	50	130	1.15e-13	70.1
MsG0380015433.01.T01	AT4G28530	60.870	46	18	0	53	98	72	117	2.77e-13	68.6
MsG0380015433.01.T01	AT1G02220	40.541	74	41	1	57	130	57	127	1.04e-12	67.4

Find 47 sgRNAs with CRISPR-Local

Find 74 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TTCAAGGGAAATGCATTAAT+TGG	0.121823	3:-70185470	MsG0380015433.01.T01:CDS
TTATTCAGAGATGGCTAAAA+TGG	0.265253	3:-70185609	MsG0380015433.01.T01:CDS
CGAAAGAAAACTATTAGTTT+AGG	0.327446	3:+70184464	None:intergenic
GAGCTACTAATGCTGGATAT+TGG	0.349984	3:-70185520	MsG0380015433.01.T01:CDS
TTCATCCTCTTCAAAACAAA+TGG	0.371961	3:-70184632	MsG0380015433.01.T01:CDS
TCCAGCATTAGTAGCTCTAT+TGG	0.388516	3:+70185526	None:intergenic
AGCATAATTGTGGAAAGAAA+AGG	0.396360	3:-70184839	MsG0380015433.01.T01:CDS
TATTGGTCCTTTGACCAGTT+GGG	0.417126	3:+70185543	None:intergenic
TCAAGGGAAATGCATTAATT+GGG	0.420828	3:-70185469	MsG0380015433.01.T01:CDS
CGAGTGGTGAAAAGACCAAT+TGG	0.426528	3:-70185409	MsG0380015433.01.T01:CDS
GCAGTTATTACTTCAGCTAA+AGG	0.433317	3:+70184601	None:intergenic
CTATTGGTCCTTTGACCAGT+TGG	0.441493	3:+70185542	None:intergenic
ACCAATAGAGCTACTAATGC+TGG	0.453301	3:-70185527	MsG0380015433.01.T01:CDS
GCATAATTGTGGAAAGAAAA+GGG	0.463486	3:-70184838	MsG0380015433.01.T01:CDS
GCTGGATATTGGAAAGCAAC+AGG	0.464158	3:-70185509	MsG0380015433.01.T01:CDS
AATGTATGTACTATGTCTTT+CGG	0.493625	3:-70185669	MsG0380015433.01.T01:CDS
GTATTCATGCATGACCCAAT+TGG	0.496635	3:+70185394	None:intergenic
TATTCAGAGATGGCTAAAAT+GGG	0.503587	3:-70185608	MsG0380015433.01.T01:CDS
TTAGCTGAAGTAATAACTGC+TGG	0.510536	3:-70184598	MsG0380015433.01.T01:CDS
TTGAACCAACCTCAATGGTC+GGG	0.514513	3:-70184574	MsG0380015433.01.T01:CDS
TTAGTTTAGGCTTTGTCTTG+AGG	0.519749	3:+70184477	None:intergenic
AGGGAGAGAAAATACCCAAC+TGG	0.524633	3:-70185557	MsG0380015433.01.T01:CDS
TTACCATTCCATGTGTGGAT+AGG	0.526862	3:+70185339	None:intergenic
AAAAGGGATGGTTCAAAACA+TGG	0.533594	3:-70184822	MsG0380015433.01.T01:CDS
AATTGGGATGAAGAAAACAT+TGG	0.537739	3:-70185453	MsG0380015433.01.T01:CDS
CAGTTGGAGAATGAGAATCT+TGG	0.538735	3:-70184505	MsG0380015433.01.T01:CDS
GAGTGGTGAAAAGACCAATT+GGG	0.539850	3:-70185408	MsG0380015433.01.T01:CDS
CTGGCTTGAACCAACCTCAA+TGG	0.543126	3:-70184579	MsG0380015433.01.T01:CDS
CAACCTATCCACACATGGAA+TGG	0.547037	3:-70185342	MsG0380015433.01.T01:intron
CTTGAACCAACCTCAATGGT+CGG	0.564238	3:-70184575	MsG0380015433.01.T01:CDS
CAATATTACCATTCCATGTG+TGG	0.569497	3:+70185334	None:intergenic
GAATTCCCGACCATTGAGGT+TGG	0.573352	3:+70184569	None:intergenic
GTCTTTGAGAAGCATAATTG+TGG	0.576940	3:-70184849	MsG0380015433.01.T01:CDS
GGTCATGCATGAATACCGAT+TGG	0.581760	3:-70185387	MsG0380015433.01.T01:CDS
AGAGTGTGTTACCCTCCAAT+CGG	0.588761	3:+70185372	None:intergenic
CTAAAATGGGAGAAGCAGAA+TGG	0.591158	3:-70185595	MsG0380015433.01.T01:CDS
CATGCATGAATACCGATTGG+AGG	0.592763	3:-70185384	MsG0380015433.01.T01:CDS
TGACGAATTCCCGACCATTG+AGG	0.595318	3:+70184565	None:intergenic
GAAAATACCCAACTGGTCAA+AGG	0.598845	3:-70185550	MsG0380015433.01.T01:CDS
AATCACTGTTGAGATGCAGT+TGG	0.605163	3:-70184521	MsG0380015433.01.T01:CDS
AATTGTGGAAAGAAAAGGGA+TGG	0.607650	3:-70184834	MsG0380015433.01.T01:CDS
ATGCATGAATACCGATTGGA+GGG	0.621001	3:-70185383	MsG0380015433.01.T01:CDS
CACATCTGATAGTGTCATGT+TGG	0.623607	3:+70185754	None:intergenic
GGGATGGTTCAAAACATGGA+AGG	0.624676	3:-70184818	MsG0380015433.01.T01:intron
CAACATGACACTATCAGATG+TGG	0.642287	3:-70185753	MsG0380015433.01.T01:CDS
GAGCACAACCTATCCACACA+TGG	0.663138	3:-70185347	MsG0380015433.01.T01:CDS
TACATAGGAAGAGCTCCGAG+TGG	0.745847	3:-70185425	MsG0380015433.01.T01:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	TATAAAACTTATTTTTATGA+TGG	+	Chr3:70185175-70185194	None:intergenic	10.0%
!!!	AATTATGCTTTCCTATTTTT+TGG	-	Chr3:70184605-70184624	MsG0380015433.01.T01:CDS	20.0%
!!!	TGAAGTTTTTGTCAAAATTA+CGG	+	Chr3:70185040-70185059	None:intergenic	20.0%
!	AATGTATGTACTATGTCTTT+CGG	-	Chr3:70184569-70184588	MsG0380015433.01.T01:CDS	25.0%
!	CTCTGAATAAACCAAAAAAT+AGG	+	Chr3:70184619-70184638	None:intergenic	25.0%
!!	AAAGACAAAGAGATTTTCAA+GGG	-	Chr3:70184753-70184772	MsG0380015433.01.T01:intron	25.0%
!!	TGGTTTTCATTAGTATTTGA+TGG	+	Chr3:70185467-70185486	None:intergenic	25.0%
!!!	AAAACATTGGTTTTCTACAT+AGG	-	Chr3:70184798-70184817	MsG0380015433.01.T01:intron	25.0%
!!!	ACCTTTTTTTTTAGAGTGAA+TGG	-	Chr3:70185354-70185373	MsG0380015433.01.T01:CDS	25.0%
!!!	CCTTTTTTTTTAGAGTGAAT+GGG	-	Chr3:70185355-70185374	MsG0380015433.01.T01:CDS	25.0%
!!!	TTTTAAAGTTATTACGAGTG+TGG	-	Chr3:70184527-70184546	MsG0380015433.01.T01:CDS	25.0%
!!!	TTTTGTTTCTCTGTTTGATT+TGG	+	Chr3:70185536-70185555	None:intergenic	25.0%
!!!	TTTTTTGGTTTATTCAGAGA+TGG	-	Chr3:70184620-70184639	MsG0380015433.01.T01:CDS	25.0%
	AATTGGGATGAAGAAAACAT+TGG	-	Chr3:70184785-70184804	MsG0380015433.01.T01:intron	30.0%
	AGCATAATTGTGGAAAGAAA+AGG	-	Chr3:70185399-70185418	MsG0380015433.01.T01:CDS	30.0%
	AGGTAATTCTATCAAACACA+TGG	+	Chr3:70185010-70185029	None:intergenic	30.0%
	ATAGATCGTCAATGAATGTT+TGG	+	Chr3:70185116-70185135	None:intergenic	30.0%
	GCATAATTGTGGAAAGAAAA+GGG	-	Chr3:70185400-70185419	MsG0380015433.01.T01:CDS	30.0%
	GTCAAAATTACGGTAACATA+AGG	+	Chr3:70185030-70185049	None:intergenic	30.0%
	TATTCAGAGATGGCTAAAAT+GGG	-	Chr3:70184630-70184649	MsG0380015433.01.T01:CDS	30.0%
	TCAAGGGAAATGCATTAATT+GGG	-	Chr3:70184769-70184788	MsG0380015433.01.T01:intron	30.0%
	TTATTCAGAGATGGCTAAAA+TGG	-	Chr3:70184629-70184648	MsG0380015433.01.T01:CDS	30.0%
	TTCAAGGGAAATGCATTAAT+TGG	-	Chr3:70184768-70184787	MsG0380015433.01.T01:intron	30.0%
	TTCATCCTCTTCAAAACAAA+TGG	-	Chr3:70185606-70185625	MsG0380015433.01.T01:CDS	30.0%
!	CAAAGACAAAGAGATTTTCA+AGG	-	Chr3:70184752-70184771	MsG0380015433.01.T01:intron	30.0%
!	CAGTAGTTTCTCTAAAAGTT+AGG	+	Chr3:70185215-70185234	None:intergenic	30.0%
!	CCCATTCACTCTAAAAAAAA+AGG	+	Chr3:70185358-70185377	None:intergenic	30.0%
!!	CTAACTTTTAGAGAAACTAC+TGG	-	Chr3:70185213-70185232	MsG0380015433.01.T01:intron	30.0%
!!	TTTCTCTGTTTGATTTGGAT+TGG	+	Chr3:70185531-70185550	None:intergenic	30.0%
!!!	AATGGTATTTTTTCTGTGTG+AGG	-	Chr3:70184661-70184680	MsG0380015433.01.T01:CDS	30.0%
!!!	ATGGTATTTTTTCTGTGTGA+GGG	-	Chr3:70184662-70184681	MsG0380015433.01.T01:CDS	30.0%
	AAAAGGGATGGTTCAAAACA+TGG	-	Chr3:70185416-70185435	MsG0380015433.01.T01:CDS	35.0%
	AATTGTGGAAAGAAAAGGGA+TGG	-	Chr3:70185404-70185423	MsG0380015433.01.T01:CDS	35.0%
	AGAAATCAGACATAGTGGTT+TGG	+	Chr3:70185487-70185506	None:intergenic	35.0%
	ATGAGAGAAATCAGACATAG+TGG	+	Chr3:70185492-70185511	None:intergenic	35.0%
	CAATATTACCATTCCATGTG+TGG	+	Chr3:70184907-70184926	None:intergenic	35.0%
	GCAGTTATTACTTCAGCTAA+AGG	+	Chr3:70185640-70185659	None:intergenic	35.0%
	TTAGCTGAAGTAATAACTGC+TGG	-	Chr3:70185640-70185659	MsG0380015433.01.T01:CDS	35.0%
!	GTCTTTGAGAAGCATAATTG+TGG	-	Chr3:70185389-70185408	MsG0380015433.01.T01:CDS	35.0%
!	TTAGTTTAGGCTTTGTCTTG+AGG	+	Chr3:70185764-70185783	None:intergenic	35.0%
!!!	CACATCCATTTGTTTTGAAG+AGG	+	Chr3:70185614-70185633	None:intergenic	35.0%
	AATCACTGTTGAGATGCAGT+TGG	-	Chr3:70185717-70185736	MsG0380015433.01.T01:CDS	40.0%
	ACCAATAGAGCTACTAATGC+TGG	-	Chr3:70184711-70184730	MsG0380015433.01.T01:intron	40.0%
	CAACATGACACTATCAGATG+TGG	-	Chr3:70184485-70184504	MsG0380015433.01.T01:CDS	40.0%
	CAGTTGGAGAATGAGAATCT+TGG	-	Chr3:70185733-70185752	MsG0380015433.01.T01:CDS	40.0%
	CTAAAATGGGAGAAGCAGAA+TGG	-	Chr3:70184643-70184662	MsG0380015433.01.T01:CDS	40.0%
	GAAAATACCCAACTGGTCAA+AGG	-	Chr3:70184688-70184707	MsG0380015433.01.T01:CDS	40.0%
	GAGCTACTAATGCTGGATAT+TGG	-	Chr3:70184718-70184737	MsG0380015433.01.T01:intron	40.0%
	GAGTGGTGAAAAGACCAATT+GGG	-	Chr3:70184830-70184849	MsG0380015433.01.T01:CDS	40.0%
	GTATTCATGCATGACCCAAT+TGG	+	Chr3:70184847-70184866	None:intergenic	40.0%
	TATTGGTCCTTTGACCAGTT+GGG	+	Chr3:70184698-70184717	None:intergenic	40.0%
	TTACCATTCCATGTGTGGAT+AGG	+	Chr3:70184902-70184921	None:intergenic	40.0%
!	AGGTTAAACACCTCTAGAGA+AGG	-	Chr3:70185440-70185459	MsG0380015433.01.T01:CDS	40.0%
!	ATGCATGAATACCGATTGGA+GGG	-	Chr3:70184855-70184874	MsG0380015433.01.T01:CDS	40.0%
!	ATTTGATGGTCCTTCTCTAG+AGG	+	Chr3:70185453-70185472	None:intergenic	40.0%
!	CACATCTGATAGTGTCATGT+TGG	+	Chr3:70184487-70184506	None:intergenic	40.0%
!	TCCAGCATTAGTAGCTCTAT+TGG	+	Chr3:70184715-70184734	None:intergenic	40.0%
!!!	CAATTGGTCTTTTCACCACT+CGG	+	Chr3:70184831-70184850	None:intergenic	40.0%
	AGAGTGTGTTACCCTCCAAT+CGG	+	Chr3:70184869-70184888	None:intergenic	45.0%
	AGGGAGAGAAAATACCCAAC+TGG	-	Chr3:70184681-70184700	MsG0380015433.01.T01:CDS	45.0%
	CAACCTATCCACACATGGAA+TGG	-	Chr3:70184896-70184915	MsG0380015433.01.T01:intron	45.0%
	CGAGTGGTGAAAAGACCAAT+TGG	-	Chr3:70184829-70184848	MsG0380015433.01.T01:CDS	45.0%
	CTATTGGTCCTTTGACCAGT+TGG	+	Chr3:70184699-70184718	None:intergenic	45.0%
	CTTGAACCAACCTCAATGGT+CGG	-	Chr3:70185663-70185682	MsG0380015433.01.T01:CDS	45.0%
	GCTGGATATTGGAAAGCAAC+AGG	-	Chr3:70184729-70184748	MsG0380015433.01.T01:intron	45.0%
	GGGATGGTTCAAAACATGGA+AGG	-	Chr3:70185420-70185439	MsG0380015433.01.T01:CDS	45.0%
	GGTCATGCATGAATACCGAT+TGG	-	Chr3:70184851-70184870	MsG0380015433.01.T01:CDS	45.0%
	TTGAACCAACCTCAATGGTC+GGG	-	Chr3:70185664-70185683	MsG0380015433.01.T01:CDS	45.0%
!	CATGCATGAATACCGATTGG+AGG	-	Chr3:70184854-70184873	MsG0380015433.01.T01:CDS	45.0%
	GAATTCCCGACCATTGAGGT+TGG	+	Chr3:70185672-70185691	None:intergenic	50.0%
	GAGCACAACCTATCCACACA+TGG	-	Chr3:70184891-70184910	MsG0380015433.01.T01:intron	50.0%
	TACATAGGAAGAGCTCCGAG+TGG	-	Chr3:70184813-70184832	MsG0380015433.01.T01:intron	50.0%
	TGACGAATTCCCGACCATTG+AGG	+	Chr3:70185676-70185695	None:intergenic	50.0%
!	CTGGCTTGAACCAACCTCAA+TGG	-	Chr3:70185659-70185678	MsG0380015433.01.T01:CDS	50.0%

Chromosome	Type	Strat	End	Strand	Name
Chr3	gene	70184477	70185783	70184477	ID=MsG0380015433.01;Name=MsG0380015433.01
Chr3	mRNA	70184477	70185783	70184477	ID=MsG0380015433.01.T01;Parent=MsG0380015433.01;Name=MsG0380015433.01.T01;_AED=0.52;_eAED=0.52;_QI=0\|0\|0\|1\|1\|1\|3\|0\|250
Chr3	exon	70185343	70185783	70185343	ID=MsG0380015433.01.T01:exon:363;Parent=MsG0380015433.01.T01
Chr3	exon	70184819	70184892	70184819	ID=MsG0380015433.01.T01:exon:362;Parent=MsG0380015433.01.T01
Chr3	exon	70184477	70184714	70184477	ID=MsG0380015433.01.T01:exon:361;Parent=MsG0380015433.01.T01
Chr3	CDS	70185343	70185783	70185343	ID=MsG0380015433.01.T01:cds;Parent=MsG0380015433.01.T01
Chr3	CDS	70184819	70184892	70184819	ID=MsG0380015433.01.T01:cds;Parent=MsG0380015433.01.T01
Chr3	CDS	70184477	70184714	70184477	ID=MsG0380015433.01.T01:cds;Parent=MsG0380015433.01.T01

Gene Sequence

>MsG0380015433.01.T01

ATGCACACCAACATGACACTATCAGATGTGGTTAAATTTATTATTTTATTTTTTAAAGTTATTACGAGTGTGGATTTGTCAGTGTCATGTCTAATGTATGTACTATGTCTTTCGGTGTTTCATAACTTAATTATGCTTTCCTATTTTTTGGTTTATTCAGAGATGGCTAAAATGGGAGAAGCAGAATGGTATTTTTTCTGTGTGAGGGAGAGAAAATACCCAACTGGTCAAAGGACCAATAGAGCTACTAATGCTGGATATTGGAAAGCAACAGGCAAAGACAAAGAGATTTTCAAGGGAAATGCATTAATTGGGATGAAGAAAACATTGGTTTTCTACATAGGAAGAGCTCCGAGTGGTGAAAAGACCAATTGGGTCATGCATGAATACCGATTGGAGGGTAACACACTCTCTGAGCACAACCTATCCACACATGGAATGAGTGAATGGGTTCTCAGTAGAGTCTTTGAGAAGCATAATTGTGGAAAGAAAAGGGATGGTTCAAAACATGGAAGAGAAACAAAAACACAAAATGACAACATTGTTCATAACAATGAAACTAGTATCTTGAACATTTCATCCTCTTCAAAACAAATGGATGTGTATCCTTTAGCTGAAGTAATAACTGCTGGCTTGAACCAACCTCAATGGTCGGGAATTCGTCAAACTTTTCTTCTCTCAAGAACAATCACTGTTGAGATGCAGTTGGAGAATGAGAATCTTGGAACAACCTCAAGACAAAGCCTAAACTAA

Protein sequence

>MsG0380015433.01.T01

MHTNMTLSDVVKFIILFFKVITSVDLSVSCLMYVLCLSVFHNLIMLSYFLVYSEMAKMGEAEWYFFCVRERKYPTGQRTNRATNAGYWKATGKDKEIFKGNALIGMKKTLVFYIGRAPSGEKTNWVMHEYRLEGNTLSEHNLSTHGMSEWVLSRVFEKHNCGKKRDGSKHGRETKTQNDNIVHNNETSILNISSSSKQMDVYPLAEVITAGLNQPQWSGIRQTFLLSRTITVEMQLENENLGTTSRQSLN*