AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0380015525.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380015525.01.T01 MTR_3g071860 84.783 828 103 3 1 821 1 812 0.0 1390
MsG0380015525.01.T01 MTR_3g071860 96.573 496 17 0 714 1209 772 1267 0.0 981
MsG0380015525.01.T01 MTR_7g026650 87.578 483 58 2 726 1208 672 1152 0.0 874
MsG0380015525.01.T01 MTR_7g026650 72.468 316 80 2 29 343 9 318 4.86e-144 466
MsG0380015525.01.T01 MTR_7g026650 66.667 303 85 5 423 724 317 604 1.69e-110 374
MsG0380015525.01.T01 MTR_1g081750 81.224 490 89 2 719 1208 629 1115 0.0 810
MsG0380015525.01.T01 MTR_1g081750 65.134 261 77 3 1 261 1 247 1.54e-96 334
MsG0380015525.01.T01 MTR_1g081750 56.231 329 119 8 398 724 263 568 2.49e-92 322
MsG0380015525.01.T01 MTR_5g083300 76.409 479 106 4 734 1208 828 1303 0.0 759
MsG0380015525.01.T01 MTR_5g083300 40.227 793 357 21 5 724 4 752 7.12e-146 474
MsG0380015525.01.T01 MTR_5g083300 76.409 479 106 4 734 1208 865 1340 0.0 758
MsG0380015525.01.T01 MTR_5g083300 40.227 793 357 21 5 724 41 789 2.18e-145 473
MsG0380015525.01.T01 MTR_7g026620 52.419 744 178 14 410 1112 36 644 0.0 658
MsG0380015525.01.T01 MTR_7g026550 40.038 532 146 15 561 1089 6 367 1.21e-88 292
MsG0380015525.01.T01 MTR_7g029525 28.138 725 417 17 539 1189 608 1302 2.03e-66 246
MsG0380015525.01.T01 MTR_7g450820 36.463 458 245 11 753 1189 781 1213 5.64e-66 244
MsG0380015525.01.T01 MTR_7g450820 33.333 156 83 5 560 711 537 675 5.44e-15 80.9
MsG0380015525.01.T01 MTR_2g437480 29.297 669 374 23 541 1164 387 1001 6.19e-63 234
MsG0380015525.01.T01 MTR_7g450790 33.477 463 270 10 751 1199 989 1427 1.01e-62 235
MsG0380015525.01.T01 MTR_7g450860 33.891 478 261 12 742 1195 811 1257 1.33e-62 234
MsG0380015525.01.T01 MTR_7g450860 32.558 172 105 4 539 709 557 718 1.31e-18 92.8
MsG0380015525.01.T01 MTR_7g050445 32.922 486 264 10 753 1209 846 1298 6.26e-60 226
MsG0380015525.01.T01 MTR_7g050445 28.205 195 119 6 520 711 564 740 1.09e-12 73.6
MsG0380015525.01.T01 MTR_8g037345 28.717 686 401 23 518 1164 216 852 7.78e-60 223
MsG0380015525.01.T01 MTR_4g088650 32.976 467 241 9 751 1197 790 1204 1.18e-57 218
MsG0380015525.01.T01 MTR_7g450780 30.816 490 282 11 739 1199 873 1334 1.40e-55 212
MsG0380015525.01.T01 MTR_7g450780 32.222 180 96 9 539 711 617 777 2.29e-11 68.9
MsG0380015525.01.T01 MTR_3g071660 45.810 179 45 3 788 966 1 127 1.04e-34 129
MsG0380015525.01.T01 MTR_1g080420 25.855 468 289 13 754 1169 689 1150 1.75e-28 125
MsG0380015525.01.T01 MTR_1g080420 25.478 471 287 13 754 1169 820 1281 1.46e-27 122
MsG0380015525.01.T01 MTR_8g094070 28.756 386 223 17 799 1156 520 881 4.08e-26 117
MsG0380015525.01.T01 MTR_8g094070 28.756 386 223 17 799 1156 520 881 5.57e-26 116
MsG0380015525.01.T01 MTR_7g026590 60.000 95 32 2 476 570 11 99 1.04e-24 100
MsG0380015525.01.T01 MTR_5g020000 27.094 406 244 13 799 1192 312 677 1.00e-22 105
MsG0380015525.01.T01 MTR_7g026610 67.606 71 23 0 210 280 13 83 2.88e-22 92.4
MsG0380015525.01.T01 MTR_3g084600 37.654 162 61 3 597 756 15 138 6.89e-22 94.7
MsG0380015525.01.T01 MTR_4g032945 73.585 53 14 0 112 164 1 53 1.61e-20 87.4
MsG0380015525.01.T01 MTR_5g004720 24.524 473 279 19 763 1202 299 726 5.00e-20 97.1
MsG0380015525.01.T01 MTR_4g096930 24.570 407 232 14 798 1183 870 1222 1.54e-19 95.9
MsG0380015525.01.T01 MTR_3g071670 50.000 100 14 2 873 972 2 65 3.48e-19 83.2
MsG0380015525.01.T01 MTR_2g084695 27.368 285 154 8 843 1127 9 240 3.88e-19 89.7
MsG0380015525.01.T01 MTR_7g026600 60.656 61 24 0 271 331 4 64 1.75e-18 80.9
MsG0380015525.01.T01 MTR_3g106210 25.592 422 235 14 799 1198 434 798 3.54e-17 88.2
MsG0380015525.01.T01 MTR_3g106210 25.592 422 235 14 799 1198 434 798 3.95e-17 87.8
MsG0380015525.01.T01 MTR_3g106210 25.592 422 235 14 799 1198 434 798 9.21e-17 86.7
MsG0380015525.01.T01 MTR_3g106210 25.592 422 235 14 799 1198 434 798 9.22e-17 86.7
MsG0380015525.01.T01 MTR_1g013190 25.424 354 214 11 799 1147 432 740 1.50e-16 85.9
MsG0380015525.01.T01 MTR_4g078495 32.335 167 100 4 1019 1178 530 690 3.45e-15 81.3
MsG0380015525.01.T01 MTR_4g078460 32.335 167 100 4 1019 1178 816 976 4.11e-15 81.3
MsG0380015525.01.T01 MTR_1g069755 23.037 382 234 13 797 1164 548 883 1.85e-14 79.3
MsG0380015525.01.T01 MTR_5g005840 24.378 402 247 12 799 1191 488 841 3.91e-14 78.2
MsG0380015525.01.T01 MTR_5g090090 24.234 359 232 8 799 1153 749 1071 1.69e-13 76.3
MsG0380015525.01.T01 MTR_5g090090 24.234 359 232 8 799 1153 749 1071 1.73e-13 75.9
MsG0380015525.01.T01 MTR_1g105050 24.378 402 246 12 799 1190 501 854 3.15e-13 75.1
MsG0380015525.01.T01 MTR_8g038125 72.973 37 10 0 592 628 10 46 3.13e-12 62.8
MsG0380015525.01.T01 MTR_3g053910 28.652 178 118 4 977 1153 856 1025 7.41e-12 70.9
MsG0380015525.01.T01 MTR_3g053910 28.652 178 118 4 977 1153 885 1054 8.15e-12 70.5
MsG0380015525.01.T01 MTR_7g090960 29.545 176 116 5 991 1165 1173 1341 2.86e-11 68.9
MsG0380015525.01.T01 MTR_7g090960 32.857 140 88 3 1026 1165 1127 1260 3.43e-11 68.6
MsG0380015525.01.T01 MTR_7g089190 38.298 94 57 1 1055 1147 690 783 6.80e-11 67.4
MsG0380015525.01.T01 MTR_7g045505 22.604 407 237 14 800 1174 126 486 8.29e-11 67.0
MsG0380015525.01.T01 MTR_7g045505 22.604 407 237 14 800 1174 126 486 8.51e-11 67.0
MsG0380015525.01.T01 MTR_3g071695 87.500 32 4 0 1166 1197 12 43 9.29e-11 59.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380015525.01.T01 AT3G42670 70.270 481 137 4 730 1208 778 1254 0.0 700
MsG0380015525.01.T01 AT3G42670 36.607 336 181 9 5 337 3 309 2.40e-50 195
MsG0380015525.01.T01 AT3G42670 34.965 286 160 9 453 724 434 707 3.57e-34 143
MsG0380015525.01.T01 AT3G42670 70.270 481 137 4 730 1208 780 1256 0.0 700
MsG0380015525.01.T01 AT3G42670 36.607 336 181 9 5 337 3 309 2.63e-50 195
MsG0380015525.01.T01 AT3G42670 34.722 288 160 9 453 724 434 709 5.11e-34 142
MsG0380015525.01.T01 AT3G42670 70.270 481 137 4 730 1208 778 1254 0.0 700
MsG0380015525.01.T01 AT3G42670 36.607 336 181 9 5 337 3 309 2.40e-50 195
MsG0380015525.01.T01 AT3G42670 34.965 286 160 9 453 724 434 707 3.57e-34 143
MsG0380015525.01.T01 AT3G42670 70.270 481 137 4 730 1208 778 1254 0.0 700
MsG0380015525.01.T01 AT3G42670 36.607 336 181 9 5 337 3 309 2.40e-50 195
MsG0380015525.01.T01 AT3G42670 34.965 286 160 9 453 724 434 707 3.57e-34 143
MsG0380015525.01.T01 AT5G20420 70.062 481 138 4 730 1208 784 1260 0.0 695
MsG0380015525.01.T01 AT5G20420 38.393 336 168 10 5 331 3 308 7.96e-55 209
MsG0380015525.01.T01 AT5G20420 37.402 254 136 8 498 737 486 730 1.60e-35 147
MsG0380015525.01.T01 AT1G05490 33.843 458 262 12 753 1193 951 1384 7.49e-62 232
MsG0380015525.01.T01 AT2G21450 28.800 625 357 18 594 1164 92 682 1.77e-57 213
MsG0380015525.01.T01 AT2G16390 28.336 727 414 22 489 1164 177 847 1.93e-57 215
MsG0380015525.01.T01 AT2G16390 28.336 727 414 22 489 1164 180 850 2.08e-57 215
MsG0380015525.01.T01 AT2G21450 28.800 625 357 18 594 1164 190 780 2.42e-57 214
MsG0380015525.01.T01 AT2G21450 28.800 625 357 18 594 1164 183 773 2.54e-57 214
MsG0380015525.01.T01 AT3G24340 32.159 454 260 9 753 1197 700 1114 4.09e-57 216
MsG0380015525.01.T01 AT3G24340 33.333 195 96 8 520 709 430 595 2.25e-19 95.1
MsG0380015525.01.T01 AT5G63950 27.132 387 227 15 799 1156 495 855 1.02e-23 109
MsG0380015525.01.T01 AT5G63950 26.615 387 229 14 799 1156 512 872 1.05e-23 109
MsG0380015525.01.T01 AT3G19210 23.779 471 285 16 747 1188 279 704 2.32e-21 101
MsG0380015525.01.T01 AT3G19210 24.313 473 282 16 747 1188 279 706 6.32e-21 100
MsG0380015525.01.T01 AT3G19210 24.313 473 282 16 747 1188 279 706 1.17e-20 99.0
MsG0380015525.01.T01 AT1G08600 34.969 163 94 4 1016 1169 1102 1261 7.89e-18 90.5
MsG0380015525.01.T01 AT1G08600 34.969 163 94 4 1016 1169 1123 1282 8.07e-18 90.5
MsG0380015525.01.T01 AT1G08600 34.969 163 94 4 1016 1169 1123 1282 8.07e-18 90.5
MsG0380015525.01.T01 AT1G08600 34.969 163 94 4 1016 1169 1123 1282 8.07e-18 90.5
MsG0380015525.01.T01 AT5G44800 26.044 407 230 16 798 1191 825 1173 8.50e-18 90.5
MsG0380015525.01.T01 AT4G31900 22.817 504 291 15 681 1147 214 656 2.74e-16 85.1
MsG0380015525.01.T01 AT4G31900 22.817 504 291 15 681 1147 214 656 3.40e-16 84.7
MsG0380015525.01.T01 AT4G31900 22.222 504 294 14 681 1147 173 615 3.62e-16 84.7
MsG0380015525.01.T01 AT1G03750 30.939 181 111 5 1006 1178 523 697 4.84e-16 84.0
MsG0380015525.01.T01 AT2G25170 26.171 363 200 14 799 1147 419 727 7.96e-16 84.0
MsG0380015525.01.T01 AT2G25170 26.171 363 200 14 799 1147 419 727 7.96e-16 84.0
MsG0380015525.01.T01 AT2G25170 26.171 363 200 14 799 1147 436 744 8.63e-16 83.6
MsG0380015525.01.T01 AT5G66750 34.091 176 109 4 1026 1200 540 709 1.04e-15 82.8
MsG0380015525.01.T01 AT2G25170 26.171 363 200 14 799 1147 445 753 1.11e-15 83.2
MsG0380015525.01.T01 AT3G06010 24.318 403 247 12 799 1191 528 882 7.17e-14 77.4
MsG0380015525.01.T01 AT2G44980 25.538 372 227 14 800 1160 181 513 1.46e-13 76.3
MsG0380015525.01.T01 AT2G28290 39.623 106 63 1 1042 1147 1101 1205 2.71e-12 72.4
MsG0380015525.01.T01 AT2G28290 39.623 106 63 1 1042 1147 1102 1206 2.71e-12 72.4
MsG0380015525.01.T01 AT2G28290 39.623 106 63 1 1042 1147 1101 1205 2.73e-12 72.4
MsG0380015525.01.T01 AT2G28290 39.623 106 63 1 1042 1147 1101 1205 2.73e-12 72.4
MsG0380015525.01.T01 AT2G28290 39.623 106 63 1 1042 1147 1102 1206 2.89e-12 72.4
MsG0380015525.01.T01 AT2G28290 39.623 106 63 1 1042 1147 1101 1205 3.04e-12 72.4
MsG0380015525.01.T01 AT3G57300 32.414 145 92 3 1026 1170 1222 1360 3.16e-12 72.0
MsG0380015525.01.T01 AT3G57300 32.414 145 92 3 1026 1170 1222 1360 3.16e-12 72.0
MsG0380015525.01.T01 AT3G57300 32.414 145 92 3 1026 1170 1255 1393 3.63e-12 72.0
MsG0380015525.01.T01 AT2G18760 29.412 153 97 4 1017 1164 729 875 4.35e-12 71.6
MsG0380015525.01.T01 AT2G18760 29.412 153 97 4 1017 1164 729 875 4.35e-12 71.6
MsG0380015525.01.T01 AT2G18760 29.412 153 97 4 1017 1164 729 875 4.35e-12 71.6
MsG0380015525.01.T01 AT2G18760 29.412 153 97 4 1017 1164 729 875 4.35e-12 71.6
MsG0380015525.01.T01 AT2G18760 29.412 153 97 4 1017 1164 729 875 4.35e-12 71.6
MsG0380015525.01.T01 AT2G18760 29.412 153 97 4 1017 1164 729 875 4.35e-12 71.6
MsG0380015525.01.T01 AT2G18760 29.412 153 97 4 1017 1164 788 934 4.49e-12 71.6
MsG0380015525.01.T01 AT5G19310 29.319 191 122 4 1007 1196 427 605 6.30e-12 70.9
MsG0380015525.01.T01 AT5G19310 29.319 191 122 4 1007 1196 691 869 7.51e-12 70.5
MsG0380015525.01.T01 AT2G13370 33.846 130 79 2 1028 1156 957 1080 1.30e-11 70.1
MsG0380015525.01.T01 AT2G13370 33.846 130 79 2 1028 1156 957 1080 1.30e-11 70.1
MsG0380015525.01.T01 AT2G13370 33.846 130 79 2 1028 1156 957 1080 1.30e-11 70.1
MsG0380015525.01.T01 AT5G05130 34.959 123 74 3 1026 1147 725 842 2.99e-11 68.6

Find 164 sgRNAs with CRISPR-Local

Find 338 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACATTGTTTCAGAACAATTT+TGG 0.187519 3:-71406259 MsG0380015525.01.T01:CDS
ATTAGTCAAATAATGATATT+TGG 0.190711 3:+71408404 None:intergenic
TGACGGTGATGGCAAGTTTA+AGG 0.211148 3:-71408451 MsG0380015525.01.T01:CDS
CCTCTGAAATTAAGCCTTAT+AGG 0.223041 3:-71409022 MsG0380015525.01.T01:CDS
TATAGATTGGATGAAGAAAT+TGG 0.225183 3:-71407494 MsG0380015525.01.T01:CDS
AACAAGCATGTTGGAGAAAA+AGG 0.240380 3:-71407980 MsG0380015525.01.T01:CDS
TCATCACTTGATATTGTTGT+AGG 0.263435 3:+71408321 None:intergenic
AACCTTGATTTAGTGCTTCT+AGG 0.271299 3:+71406334 None:intergenic
ACTATCCTTGGATTCTTTCT+TGG 0.272245 3:+71407529 None:intergenic
CATATAAGTTGTTCTCTTGT+AGG 0.274870 3:+71408590 None:intergenic
TTATAATCTTCATCAACTTT+TGG 0.276698 3:+71407005 None:intergenic
TAGTGATGTCAAACATGTTT+TGG 0.279882 3:-71406530 MsG0380015525.01.T01:CDS
GCATAACATTGCTGGCTCTA+TGG 0.281856 3:-71406847 MsG0380015525.01.T01:CDS
ACTATCTATTATTTCCTTGC+AGG 0.289125 3:+71408068 None:intergenic
GCAAAATGGCAAAGAGATTA+TGG 0.292136 3:-71405597 MsG0380015525.01.T01:CDS
ACATCAAGTTATCTTCTTGA+TGG 0.297384 3:-71407871 MsG0380015525.01.T01:CDS
CAGAAGAGGATGGTGGTAAG+AGG 0.300780 3:-71408539 MsG0380015525.01.T01:CDS
CTTACTGGAATAGACGTAAA+TGG 0.306756 3:+71409774 None:intergenic
ATTCAATGGCGCCCATAAAA+AGG 0.307589 3:-71410915 None:intergenic
TCGACCGGGCCAGCAGAAAA+TGG 0.318508 3:-71405375 MsG0380015525.01.T01:CDS
GGAAGAAAATCCTGATGATT+TGG 0.323484 3:-71407926 MsG0380015525.01.T01:CDS
TTCTCTGCTTGCCATTTAGA+AGG 0.325243 3:+71405239 None:intergenic
CAAGATTGTGTATCAAGTTA+TGG 0.325678 3:-71408865 MsG0380015525.01.T01:CDS
TGGTGCTGATGTGTTGAATT+TGG 0.328233 3:-71408358 MsG0380015525.01.T01:CDS
GCAAAATCAATGATTCTTCC+TGG 0.333207 3:-71406568 MsG0380015525.01.T01:CDS
ATTGATATATCTATGCTATT+AGG 0.336391 3:-71409822 MsG0380015525.01.T01:CDS
AGAACTTCATGAATAAATTT+CGG 0.338011 3:+71406205 None:intergenic
ACTTCATGTTGTGGATGATA+TGG 0.339055 3:-71408229 MsG0380015525.01.T01:CDS
TCTGATGAATCCCACCTATA+AGG 0.345661 3:+71409008 None:intergenic
CTCAACCTCAAGAGGGTAAC+TGG 0.345817 3:+71405871 None:intergenic
AGGGCTTTCTCTCAATGCTT+TGG 0.345836 3:+71406387 None:intergenic
AATTCTTCTGAGACTCTTCC+TGG 0.348075 3:-71405980 MsG0380015525.01.T01:CDS
AGCAAATTTGATTTGAGAAA+AGG 0.352698 3:-71405746 MsG0380015525.01.T01:CDS
GCACTTTGTCATCAGATATT+CGG 0.354010 3:-71409899 MsG0380015525.01.T01:CDS
TCAACTTCATGTGATGGCTT+TGG 0.355507 3:+71408708 None:intergenic
TTAATGAAATCGACAACGTT+TGG 0.355745 3:-71406935 MsG0380015525.01.T01:CDS
AAGTATTATGTTGAAGCCTT+TGG 0.358364 3:+71409072 None:intergenic
ACAGAAACTTCAGAAGAAAA+TGG 0.360997 3:-71405903 MsG0380015525.01.T01:CDS
TCATTAATCAATGGTTCATC+AGG 0.361796 3:+71406951 None:intergenic
TTGTGGAAGATCCTTCTAAA+TGG 0.362063 3:-71405250 MsG0380015525.01.T01:CDS
TTTCTTTGGCATAACATTGC+TGG 0.370580 3:-71406855 MsG0380015525.01.T01:CDS
GAAATGTATCCCTTCCCATT+TGG 0.379249 3:+71408197 None:intergenic
ACAGTGCAGTGAAGAAAATA+AGG 0.381838 3:-71407042 MsG0380015525.01.T01:CDS
AAGATTGTGTATCAAGTTAT+GGG 0.381846 3:-71408864 MsG0380015525.01.T01:CDS
GATAGGTGGAATGCCCAAAA+AGG 0.388041 3:-71407079 MsG0380015525.01.T01:intron
TCATCAAGTATCAAGATTCC+AGG 0.400291 3:+71406367 None:intergenic
TAATGAAATCGACAACGTTT+GGG 0.400568 3:-71406934 MsG0380015525.01.T01:CDS
GCTCAGAACAAATCTTACTT+TGG 0.411413 3:+71405721 None:intergenic
AAAGAGATTATGGTACTAAC+AGG 0.411733 3:-71405587 MsG0380015525.01.T01:CDS
CACAATCTAGATTACTCGTT+GGG 0.425426 3:-71408968 MsG0380015525.01.T01:CDS
AGTAATATTCTCAATTCTGT+TGG 0.426455 3:+71406289 None:intergenic
AGCATAGATATATCAATTCC+AGG 0.429264 3:+71409828 None:intergenic
GCATTTGAAGCAGTATTGAA+TGG 0.430979 3:-71410002 MsG0380015525.01.T01:CDS
ACTTCATGTGATGGCTTTGG+TGG 0.433440 3:+71408711 None:intergenic
ATCATGTTCACAACTATCCT+TGG 0.438359 3:+71407517 None:intergenic
ATATAAGTTGTTCTCTTGTA+GGG 0.439124 3:+71408591 None:intergenic
ATTTCTTGTGCAAAGAAGAA+TGG 0.444673 3:-71408378 MsG0380015525.01.T01:CDS
TTGTCGATTTCATTAATCAA+TGG 0.444704 3:+71406942 None:intergenic
TGATGATTTGGATGCCTTGT+GGG 0.445174 3:-71407914 MsG0380015525.01.T01:CDS
ATACTGATATTATTAGTCCT+TGG 0.448089 3:-71408836 MsG0380015525.01.T01:CDS
TCAAGTGATGAAGAAGTTGA+TGG 0.452513 3:-71408309 MsG0380015525.01.T01:CDS
GTCGTACACATCAATAAAAC+CGG 0.453824 3:+71406009 None:intergenic
TTGACATCACTAGAAGGTCT+TGG 0.457036 3:+71406541 None:intergenic
CACAAGGCATCCAAATCATC+AGG 0.457690 3:+71407916 None:intergenic
GTTAACTTATATGATGATCA+AGG 0.462568 3:-71409167 MsG0380015525.01.T01:CDS
CATGATTATGAAGAATGAAA+AGG 0.465758 3:-71405159 MsG0380015525.01.T01:CDS
ATCAAAAGCTCAACCTCAAG+AGG 0.468504 3:+71405863 None:intergenic
CATGAAGAACTAGATCATAA+AGG 0.470683 3:-71408114 MsG0380015525.01.T01:CDS
ACATCAAATTGAGAAACAAT+AGG 0.472158 3:+71408768 None:intergenic
TCTTTAAAGAGAAGATAAAG+AGG 0.473356 3:-71408257 MsG0380015525.01.T01:CDS
GATTGAAGATGATATACTTA+GGG 0.473462 3:-71405216 MsG0380015525.01.T01:CDS
GTGTATCAGTTATTGACGAC+CGG 0.474170 3:-71405347 MsG0380015525.01.T01:CDS
AGATTGAAGATGATATACTT+AGG 0.475140 3:-71405217 MsG0380015525.01.T01:CDS
ACACAACCTACGTAACGTTC+AGG 0.477670 3:+71408651 None:intergenic
CTAGAAGGTCTTGGAAATCC+AGG 0.479150 3:+71406550 None:intergenic
ACACCCTAGTGTTCTTGTCA+TGG 0.484111 3:-71406476 MsG0380015525.01.T01:CDS
TGGTGGTAAGAGGGATCAAA+AGG 0.487310 3:-71408529 MsG0380015525.01.T01:CDS
CACCCTAGTGTTCTTGTCAT+GGG 0.490664 3:-71406475 MsG0380015525.01.T01:CDS
ACAGTAGGCTCTTCTTCAGT+TGG 0.493427 3:+71408021 None:intergenic
AACACAACCACCACTTGAGT+TGG 0.495316 3:+71406800 None:intergenic
GAGCTAGACTTGTTTGAAAG+AGG 0.495712 3:-71405563 MsG0380015525.01.T01:CDS
TATTATGTTGAAGCCTTTGG+AGG 0.500254 3:+71409075 None:intergenic
AAGCAGTATTGAATGGATCA+TGG 0.507736 3:-71409995 MsG0380015525.01.T01:CDS
GTTATTGACGACCGGGTCGA+TGG 0.509028 3:-71405339 MsG0380015525.01.T01:CDS
TATTGATGAGGAGAAGATGC+AGG 0.512826 3:-71406059 MsG0380015525.01.T01:CDS
AAGCCATCACATGAAGTTGA+AGG 0.513509 3:-71408705 MsG0380015525.01.T01:CDS
CAGATATTCGGATAAGATCA+AGG 0.513601 3:-71409887 MsG0380015525.01.T01:CDS
TTCAGTATCAATGAAACGTA+AGG 0.514290 3:+71409932 None:intergenic
CTTCAACATAATACTTGTGA+AGG 0.515406 3:-71409065 MsG0380015525.01.T01:CDS
TCAATCAATGCTTGTGCTGA+AGG 0.515842 3:-71405485 MsG0380015525.01.T01:CDS
GAAGAACTACTTGGAAAGAG+TGG 0.517977 3:-71405301 MsG0380015525.01.T01:CDS
AGGTTGTGTTGTTGAGAAGT+TGG 0.518892 3:-71408637 MsG0380015525.01.T01:CDS
TTCACAACATTTATAAGCCA+AGG 0.522728 3:+71408819 None:intergenic
AACTCTATTAAGAATCTCAC+AGG 0.523720 3:+71405641 None:intergenic
CCATGGATGTATTGATCCGA+GGG 0.527482 3:+71405838 None:intergenic
ACATGTTTGACATCACTAGA+AGG 0.528845 3:+71406535 None:intergenic
AAGCCTTCAACTTCATGTGA+TGG 0.530172 3:+71408702 None:intergenic
TTGTGAACATGATTATAGAT+TGG 0.534056 3:-71407507 MsG0380015525.01.T01:CDS
AGCCTACTGTAAATGAGAAG+TGG 0.536085 3:-71408008 MsG0380015525.01.T01:CDS
TTCCACTTCTCATTTACAGT+AGG 0.536954 3:+71408006 None:intergenic
AGATGATATACTTAGGGAGA+TGG 0.537029 3:-71405210 MsG0380015525.01.T01:CDS
GTTGTTGAGAAGTTGGAAGT+TGG 0.537957 3:-71408630 MsG0380015525.01.T01:CDS
CTCTTCTTCAGATTCAGAAG+AGG 0.540428 3:-71408553 MsG0380015525.01.T01:CDS
ATCCTAGAAGCACTAAATCA+AGG 0.543534 3:-71406336 MsG0380015525.01.T01:CDS
AGCTAGACTTGTTTGAAAGA+GGG 0.545005 3:-71405562 MsG0380015525.01.T01:CDS
AAATTGACATGAACATTGAT+CGG 0.547067 3:+71409193 None:intergenic
GGAATCTTGATACTTGATGA+AGG 0.550715 3:-71406364 MsG0380015525.01.T01:CDS
CTCTATGGAACCATCACTCA+TGG 0.552151 3:-71406832 MsG0380015525.01.T01:CDS
TACAATCTCATGTTGTTCAT+CGG 0.552573 3:+71405925 None:intergenic
TCTTCAGATTCAGAAGAGGA+TGG 0.556076 3:-71408549 MsG0380015525.01.T01:CDS
AATGTATATATTTGTAAACC+AGG 0.562154 3:+71405962 None:intergenic
ATAAGTATAGAAGAACTACT+TGG 0.563508 3:-71405310 MsG0380015525.01.T01:CDS
ACCATGGATGTATTGATCCG+AGG 0.564240 3:+71405837 None:intergenic
CCCTCGGATCAATACATCCA+TGG 0.564663 3:-71405838 MsG0380015525.01.T01:CDS
AAGAACTACTTGGAAAGAGT+GGG 0.567137 3:-71405300 MsG0380015525.01.T01:CDS
ATTCAATGCTGATGCCTGCA+AGG 0.569248 3:-71408082 MsG0380015525.01.T01:CDS
TATGATGATCAAGGTTCACT+TGG 0.572239 3:-71409158 MsG0380015525.01.T01:CDS
AGAAGAGGATGGTGGTAAGA+GGG 0.572455 3:-71408538 MsG0380015525.01.T01:CDS
TGAAATTAAGCCTTATAGGT+GGG 0.572501 3:-71409018 MsG0380015525.01.T01:CDS
CCTATAAGGCTTAATTTCAG+AGG 0.573942 3:+71409022 None:intergenic
GATTCTAAATACAGAAGGAA+AGG 0.574058 3:-71406172 MsG0380015525.01.T01:CDS
TTTATTGATGTGTACGACAG+TGG 0.574824 3:-71406004 MsG0380015525.01.T01:CDS
CATCAAGTATCAAGATTCCA+GGG 0.577717 3:+71406368 None:intergenic
GAGTACCAGTTACCCTCTTG+AGG 0.579454 3:-71405876 MsG0380015525.01.T01:CDS
TCACAATCTAGATTACTCGT+TGG 0.580048 3:-71408969 MsG0380015525.01.T01:CDS
ACTTAGGGAGATGGTTGAAG+AGG 0.582988 3:-71405201 MsG0380015525.01.T01:CDS
GCTTGCGACGTTCGAAACGT+AGG 0.587148 3:-71408683 MsG0380015525.01.T01:CDS
GAAGCACTAAATCAAGGTTG+AGG 0.587727 3:-71406330 MsG0380015525.01.T01:CDS
GTGGAAGGAAACAAGCATGT+TGG 0.588239 3:-71407989 MsG0380015525.01.T01:CDS
ATTGTTCTGAAACAATGTGC+CGG 0.589502 3:+71406264 None:intergenic
TGATACCAAGAAAGAATCCA+AGG 0.593538 3:-71407534 MsG0380015525.01.T01:CDS
TAGCCCATGACAAGAACACT+AGG 0.596138 3:+71406472 None:intergenic
CTGAAATTAAGCCTTATAGG+TGG 0.602209 3:-71409019 MsG0380015525.01.T01:CDS
CTTATCTTCTTCCATCGACC+CGG 0.602308 3:+71405328 None:intergenic
AGCATCGAAAAGCGATGACG+AGG 0.602778 3:-71407947 MsG0380015525.01.T01:CDS
TTACGATAATTAGCATCGAA+TGG 0.605659 3:+71410871 None:intergenic
TACTGTAAATGAGAAGTGGA+AGG 0.605920 3:-71408004 MsG0380015525.01.T01:CDS
AGTTAGATTCTAAATACAGA+AGG 0.607419 3:-71406177 MsG0380015525.01.T01:CDS
AAAGCATTGAGAGAAAGCCC+TGG 0.610887 3:-71406385 MsG0380015525.01.T01:CDS
ATTCGCACACAGAAAATACA+TGG 0.611483 3:-71406410 MsG0380015525.01.T01:CDS
CTGATGATTTGGATGCCTTG+TGG 0.612273 3:-71407915 MsG0380015525.01.T01:CDS
GAAAGAACGTCATTTGCTTG+AGG 0.614499 3:-71406134 MsG0380015525.01.T01:CDS
GGAATATACTGTCTTCGATG+TGG 0.617949 3:-71407473 MsG0380015525.01.T01:CDS
TGTATTCATTTCTTCCCACA+AGG 0.620617 3:+71407900 None:intergenic
GAATTGAGAATATTACTCTC+CGG 0.621894 3:-71406283 MsG0380015525.01.T01:CDS
GAGGAAGAGACTTCATGTTG+TGG 0.623646 3:-71408238 MsG0380015525.01.T01:CDS
TCTAAATACAGAAGGAAAGG+CGG 0.627794 3:-71406169 MsG0380015525.01.T01:CDS
TGTATCAGTTATTGACGACC+GGG 0.631867 3:-71405346 MsG0380015525.01.T01:CDS
TCAAGGTTCACTTGGTACAG+AGG 0.634309 3:-71409150 MsG0380015525.01.T01:CDS
GATGTGTTGAATTTGGAGTA+CGG 0.641704 3:-71408351 MsG0380015525.01.T01:CDS
AATTAACTCAGATATTGATG+AGG 0.647649 3:-71406071 MsG0380015525.01.T01:CDS
AAATTTGAAGATCAAAGCAG+CGG 0.654526 3:-71405527 MsG0380015525.01.T01:CDS
ATTGATGAGGAGAAGATGCA+GGG 0.655538 3:-71406058 MsG0380015525.01.T01:CDS
GAATGGATCATGGCAACCTG+TGG 0.660516 3:-71409985 MsG0380015525.01.T01:CDS
GTCTTGGCAAGATACAGAAG+TGG 0.663388 3:-71406504 MsG0380015525.01.T01:CDS
TCAAAAGCTCAACCTCAAGA+GGG 0.663408 3:+71405864 None:intergenic
TCAGATTCAGAAGAGGATGG+TGG 0.664458 3:-71408546 MsG0380015525.01.T01:CDS
AGATTGTGTATCAAGTTATG+GGG 0.667010 3:-71408863 MsG0380015525.01.T01:CDS
TTATCTTCTTGATGGAACTG+CGG 0.671963 3:-71407863 MsG0380015525.01.T01:intron
AAGCTATTAATGTGAACACA+AGG 0.677127 3:-71408485 MsG0380015525.01.T01:CDS
GAACATTGATCGGATTTGTG+AGG 0.698234 3:+71409203 None:intergenic
AGCCCATGACAAGAACACTA+GGG 0.709112 3:+71406473 None:intergenic
GTACAGCCTGAACGTTACGT+AGG 0.720601 3:-71408657 MsG0380015525.01.T01:CDS
GAAGAACTAGATCATAAAGG+CGG 0.724609 3:-71408111 MsG0380015525.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAAAATAATATCAAGAA+AGG + Chr3:71406559-71406578 None:intergenic 10.0%
!! CATATATAGTAATAAAATTA+AGG + Chr3:71405222-71405241 None:intergenic 10.0%
!! CTTAATTTATATATAATGAT+AGG - Chr3:71408959-71408978 MsG0380015525.01.T01:CDS 10.0%
!! TAATTTCTTGATAAAAAAAA+GGG - Chr3:71406371-71406390 MsG0380015525.01.T01:CDS 10.0%
!! TTAATTTCTTGATAAAAAAA+AGG - Chr3:71406370-71406389 MsG0380015525.01.T01:CDS 10.0%
!!! AATTAATACATTTTAATTAC+AGG - Chr3:71405895-71405914 MsG0380015525.01.T01:CDS 10.0%
!! AAAATATGAAAAATCATCAA+TGG - Chr3:71405268-71405287 MsG0380015525.01.T01:CDS 15.0%
!! AATTTATATATAATGATAGG+TGG - Chr3:71408962-71408981 MsG0380015525.01.T01:CDS 15.0%
!! ATTAGTCAAATAATGATATT+TGG + Chr3:71407654-71407673 None:intergenic 15.0%
!!! AATTACATCTTTTTTAAAGA+AGG - Chr3:71407139-71407158 MsG0380015525.01.T01:intron 15.0%
!!! AGTTTTTCTAAGAAAAATTA+AGG + Chr3:71405762-71405781 None:intergenic 15.0%
!!! TTTAAAACTTTTTACACTAA+CGG + Chr3:71408276-71408295 None:intergenic 15.0%
!!! TTTTTTATTTGACTTACAAA+TGG + Chr3:71408642-71408661 None:intergenic 15.0%
!! AAGGAAAAATAACAAAAATG+TGG + Chr3:71405667-71405686 None:intergenic 20.0%
!! AATAAAAAGTTTGAACTTAC+TGG + Chr3:71406299-71406318 None:intergenic 20.0%
!! AATGTATATATTTGTAAACC+AGG + Chr3:71410096-71410115 None:intergenic 20.0%
!! AGAACTTCATGAATAAATTT+CGG + Chr3:71409853-71409872 None:intergenic 20.0%
!! AGGAAAAATAACAAAAATGT+GGG + Chr3:71405666-71405685 None:intergenic 20.0%
!! ATTGATATATCTATGCTATT+AGG - Chr3:71406233-71406252 MsG0380015525.01.T01:CDS 20.0%
!! TATACAATAAGTATCAAGAT+TGG + Chr3:71405787-71405806 None:intergenic 20.0%
!! TTAACTGTATTCTCTTTATT+TGG - Chr3:71408889-71408908 MsG0380015525.01.T01:CDS 20.0%
!! TTTATCTCTTTGTAAATTGT+AGG - Chr3:71406791-71406810 MsG0380015525.01.T01:intron 20.0%
!!! AAAAAGCTTTTGAATTTCTT+TGG - Chr3:71409186-71409205 MsG0380015525.01.T01:CDS 20.0%
!!! GATGTATTTTATGATTATGA+TGG - Chr3:71407305-71407324 MsG0380015525.01.T01:intron 20.0%
!!! TATTTGAGAAATATTTTCAG+TGG - Chr3:71410436-71410455 MsG0380015525.01.T01:intron 20.0%
!!! TGTAAAAAGTTTTAAACTGT+CGG - Chr3:71408280-71408299 MsG0380015525.01.T01:CDS 20.0%
!!! TGTTTTTATCTTCTTTTATG+AGG - Chr3:71408445-71408464 MsG0380015525.01.T01:CDS 20.0%
!!! TTATAATCTTCATCAACTTT+TGG + Chr3:71409053-71409072 None:intergenic 20.0%
!!! TTGTTATTTTTCCTTTTACT+TGG - Chr3:71405672-71405691 MsG0380015525.01.T01:CDS 20.0%
!!! TTTAAAGTCACATATACAAT+TGG + Chr3:71408316-71408335 None:intergenic 20.0%
! AAAAATCATCTCCAAGTAAA+AGG + Chr3:71405686-71405705 None:intergenic 25.0%
! AAATTGACATGAACATTGAT+CGG + Chr3:71406865-71406884 None:intergenic 25.0%
! AACTTCATTTCTTAGTAAAC+TGG - Chr3:71406320-71406339 MsG0380015525.01.T01:CDS 25.0%
! AAGAAAAGAATTGATGAGAA+AGG + Chr3:71409308-71409327 None:intergenic 25.0%
! AAGATTGTGTATCAAGTTAT+GGG - Chr3:71407191-71407210 MsG0380015525.01.T01:intron 25.0%
! AATAATATCAAGAAAGGTCA+CGG + Chr3:71406553-71406572 None:intergenic 25.0%
! AATGATGTGACAATTATGAT+TGG - Chr3:71408364-71408383 MsG0380015525.01.T01:CDS 25.0%
! AATTAACTCAGATATTGATG+AGG - Chr3:71409984-71410003 MsG0380015525.01.T01:CDS 25.0%
! ACATCAAATTGAGAAACAAT+AGG + Chr3:71407290-71407309 None:intergenic 25.0%
! ACGAGTAATGAAAAATGAAA+AGG - Chr3:71410365-71410384 MsG0380015525.01.T01:intron 25.0%
! AGATTGAAGATGATATACTT+AGG - Chr3:71410838-71410857 MsG0380015525.01.T01:intron 25.0%
! AGTAATATTCTCAATTCTGT+TGG + Chr3:71409769-71409788 None:intergenic 25.0%
! AGTTAGATTCTAAATACAGA+AGG - Chr3:71409878-71409897 MsG0380015525.01.T01:CDS 25.0%
! ATAAGTATAGAAGAACTACT+TGG - Chr3:71410745-71410764 MsG0380015525.01.T01:intron 25.0%
! ATACTGATATTATTAGTCCT+TGG - Chr3:71407219-71407238 MsG0380015525.01.T01:intron 25.0%
! ATATAAGTTGTTCTCTTGTA+GGG + Chr3:71407467-71407486 None:intergenic 25.0%
! CAAATGTGATTTATTTCAAG+TGG + Chr3:71406722-71406741 None:intergenic 25.0%
! CATGATTATGAAGAATGAAA+AGG - Chr3:71410896-71410915 MsG0380015525.01.T01:CDS 25.0%
! GAAAATCCAAGTTCAAATTA+TGG + Chr3:71406671-71406690 None:intergenic 25.0%
! GATTCAGTTTAAATATAGCA+GGG - Chr3:71408477-71408496 MsG0380015525.01.T01:CDS 25.0%
! GATTGAAGATGATATACTTA+GGG - Chr3:71410839-71410858 MsG0380015525.01.T01:intron 25.0%
! GGTAAAAACTCTTAATAAAG+AGG - Chr3:71406926-71406945 MsG0380015525.01.T01:CDS 25.0%
! GTTAACTTATATGATGATCA+AGG - Chr3:71406888-71406907 MsG0380015525.01.T01:CDS 25.0%
! TATAGATTGGATGAAGAAAT+TGG - Chr3:71408561-71408580 MsG0380015525.01.T01:CDS 25.0%
! TGATTCAGTTTAAATATAGC+AGG - Chr3:71408476-71408495 MsG0380015525.01.T01:CDS 25.0%
! TGATTTAGTTAAACGTTTGT+TGG - Chr3:71405613-71405632 MsG0380015525.01.T01:CDS 25.0%
! TGTACACTTGATAAATTTGT+TGG - Chr3:71405457-71405476 MsG0380015525.01.T01:CDS 25.0%
! TTAATCTAACAATCTATAGC+CGG + Chr3:71405383-71405402 None:intergenic 25.0%
! TTGTGAACATGATTATAGAT+TGG - Chr3:71408548-71408567 MsG0380015525.01.T01:CDS 25.0%
!! AAATATTTTCAGTGGCAAAA+TGG - Chr3:71410444-71410463 MsG0380015525.01.T01:intron 25.0%
!! ACATTGTTTCAGAACAATTT+TGG - Chr3:71409796-71409815 MsG0380015525.01.T01:CDS 25.0%
!! ATAAACCATGATTTTGAATG+TGG - Chr3:71405835-71405854 MsG0380015525.01.T01:CDS 25.0%
!! TCTTTAAAGAGAAGATAAAG+AGG - Chr3:71407798-71407817 MsG0380015525.01.T01:intron 25.0%
!!! AGCAAATTTGATTTGAGAAA+AGG - Chr3:71410309-71410328 MsG0380015525.01.T01:intron 25.0%
!!! AGCTTTGTTAATTCACAATT+TGG + Chr3:71405499-71405518 None:intergenic 25.0%
!!! ATATGGATTTTGAAACCAAA+TGG - Chr3:71407843-71407862 MsG0380015525.01.T01:intron 25.0%
!!! CTGTTTTGAAACAAGAATTA+GGG + Chr3:71406034-71406053 None:intergenic 25.0%
!!! GAAATTCAAAAGCTTTTTTC+TGG + Chr3:71409184-71409203 None:intergenic 25.0%
!!! TATGGATTTTGAAACCAAAT+GGG - Chr3:71407844-71407863 MsG0380015525.01.T01:intron 25.0%
!!! TGTTTTGAAACAAGAATTAG+GGG + Chr3:71406033-71406052 None:intergenic 25.0%
!!! TTGTCGATTTCATTAATCAA+TGG + Chr3:71409116-71409135 None:intergenic 25.0%
AAAGAGATTATGGTACTAAC+AGG - Chr3:71410468-71410487 MsG0380015525.01.T01:intron 30.0%
AAATTTGAAGATCAAAGCAG+CGG - Chr3:71410528-71410547 MsG0380015525.01.T01:intron 30.0%
AACTCTATTAAGAATCTCAC+AGG + Chr3:71410417-71410436 None:intergenic 30.0%
AAGCTATTAATGTGAACACA+AGG - Chr3:71407570-71407589 MsG0380015525.01.T01:intron 30.0%
AAGTATTATGTTGAAGCCTT+TGG + Chr3:71406986-71407005 None:intergenic 30.0%
ACAACATATCCAACAAAATG+AGG + Chr3:71408696-71408715 None:intergenic 30.0%
ACAAGGAACAAAAATTCTGA+CGG - Chr3:71407587-71407606 MsG0380015525.01.T01:intron 30.0%
ACAGAAACTTCAGAAGAAAA+TGG - Chr3:71410152-71410171 MsG0380015525.01.T01:intron 30.0%
ACATCAAGTTATCTTCTTGA+TGG - Chr3:71408184-71408203 MsG0380015525.01.T01:CDS 30.0%
ACTATCTATTATTTCCTTGC+AGG + Chr3:71407990-71408009 None:intergenic 30.0%
AGATTGTGTATCAAGTTATG+GGG - Chr3:71407192-71407211 MsG0380015525.01.T01:intron 30.0%
AGCATAGATATATCAATTCC+AGG + Chr3:71406230-71406249 None:intergenic 30.0%
ATAATATCAAGAAAGGTCAC+GGG + Chr3:71406552-71406571 None:intergenic 30.0%
ATTTCTTGTGCAAAGAAGAA+TGG - Chr3:71407677-71407696 MsG0380015525.01.T01:intron 30.0%
CAACATATCCAACAAAATGA+GGG + Chr3:71408695-71408714 None:intergenic 30.0%
CAAGATTGTGTATCAAGTTA+TGG - Chr3:71407190-71407209 MsG0380015525.01.T01:intron 30.0%
CATATAAGTTGTTCTCTTGT+AGG + Chr3:71407468-71407487 None:intergenic 30.0%
CATGAAGAACTAGATCATAA+AGG - Chr3:71407941-71407960 MsG0380015525.01.T01:CDS 30.0%
CTTCAACATAATACTTGTGA+AGG - Chr3:71406990-71407009 MsG0380015525.01.T01:CDS 30.0%
GAACTCTTAAAAATAGAGTC+AGG - Chr3:71406092-71406111 MsG0380015525.01.T01:CDS 30.0%
GAATTGAGAATATTACTCTC+CGG - Chr3:71409772-71409791 MsG0380015525.01.T01:intron 30.0%
GATTCTAAATACAGAAGGAA+AGG - Chr3:71409883-71409902 MsG0380015525.01.T01:CDS 30.0%
GTTATCAGTTAGATTCATAC+CGG + Chr3:71408940-71408959 None:intergenic 30.0%
TAAATATCAAGCCAAGTGTT+TGG + Chr3:71406775-71406794 None:intergenic 30.0%
TAATGAAATCGACAACGTTT+GGG - Chr3:71409121-71409140 MsG0380015525.01.T01:CDS 30.0%
TACAAAATGCTGACAAATAG+CGG - Chr3:71408793-71408812 MsG0380015525.01.T01:CDS 30.0%
TACAATCTCATGTTGTTCAT+CGG + Chr3:71410133-71410152 None:intergenic 30.0%
TCAAGTGGTTAATTCAGTTA+AGG + Chr3:71406707-71406726 None:intergenic 30.0%
TCATCACTTGATATTGTTGT+AGG + Chr3:71407737-71407756 None:intergenic 30.0%
TCATTAATCAATGGTTCATC+AGG + Chr3:71409107-71409126 None:intergenic 30.0%
TGTGAACTTCAGCTTAAAAA+AGG - Chr3:71407253-71407272 MsG0380015525.01.T01:intron 30.0%
TTAAATATCAGCAATAGCGT+AGG - Chr3:71408728-71408747 MsG0380015525.01.T01:CDS 30.0%
TTAATGAAATCGACAACGTT+TGG - Chr3:71409120-71409139 MsG0380015525.01.T01:CDS 30.0%
TTCACAACATTTATAAGCCA+AGG + Chr3:71407239-71407258 None:intergenic 30.0%
TTCAGTATCAATGAAACGTA+AGG + Chr3:71406126-71406145 None:intergenic 30.0%
TTCTAGCCATAATTTGAACT+TGG - Chr3:71406662-71406681 MsG0380015525.01.T01:intron 30.0%
! AATTTTCATCTGATCTTTCG+TGG - Chr3:71407111-71407130 MsG0380015525.01.T01:intron 30.0%
! ATCAAATTTTCATCCTCCAA+AGG - Chr3:71406967-71406986 MsG0380015525.01.T01:CDS 30.0%
! ATCATTTGTTGCATTCATCA+TGG + Chr3:71405339-71405358 None:intergenic 30.0%
! CTCGAATGAAAATTTTCTGT+TGG + Chr3:71407896-71407915 None:intergenic 30.0%
! GTTACTTGAAGTTATTTCCA+AGG - Chr3:71409332-71409351 MsG0380015525.01.T01:intron 30.0%
! TAGTGATGTCAAACATGTTT+TGG - Chr3:71409525-71409544 MsG0380015525.01.T01:intron 30.0%
! TGAAATTAAGCCTTATAGGT+GGG - Chr3:71407037-71407056 MsG0380015525.01.T01:CDS 30.0%
! TGATGCAAATGCCTTTTTAT+GGG + Chr3:71405154-71405173 None:intergenic 30.0%
! TGTTTTGCACAGATCTTATA+TGG + Chr3:71407172-71407191 None:intergenic 30.0%
! TTACGATAATTAGCATCGAA+TGG + Chr3:71405187-71405206 None:intergenic 30.0%
! TTGATGCAAATGCCTTTTTA+TGG + Chr3:71405155-71405174 None:intergenic 30.0%
! TTTTCATTACTCGTGAGATT+AGG + Chr3:71410359-71410378 None:intergenic 30.0%
!! AAACATGTTTTGGATTGTCT+TGG - Chr3:71409535-71409554 MsG0380015525.01.T01:intron 30.0%
!! ATTTTAGTCCCTCATTTTGT+TGG - Chr3:71408684-71408703 MsG0380015525.01.T01:CDS 30.0%
!! CGACTATTTATTTTCTGTTG+TGG - Chr3:71405923-71405942 MsG0380015525.01.T01:CDS 30.0%
!! TAAAAAGGCATTTGCATCAA+TGG - Chr3:71405155-71405174 MsG0380015525.01.T01:CDS 30.0%
!!! ATAGCTTGCTTTGTTTTTGA+AGG + Chr3:71410648-71410667 None:intergenic 30.0%
!!! ATGTGCAACTAAGTTTTTTG+CGG - Chr3:71410260-71410279 MsG0380015525.01.T01:intron 30.0%
!!! ATTTTGAAACCAAATGGGAA+GGG - Chr3:71407849-71407868 MsG0380015525.01.T01:intron 30.0%
!!! GCTGTTTTGAAACAAGAATT+AGG + Chr3:71406035-71406054 None:intergenic 30.0%
!!! TCTATTTTTAAGAGTTCCAC+AGG + Chr3:71406089-71406108 None:intergenic 30.0%
!!! TTCTTGCATGATTTTTAGTG+AGG - Chr3:71410779-71410798 MsG0380015525.01.T01:intron 30.0%
AACAAAAATTCTGACGGTGA+TGG - Chr3:71407593-71407612 MsG0380015525.01.T01:intron 35.0%
AACAAGCATGTTGGAGAAAA+AGG - Chr3:71408075-71408094 MsG0380015525.01.T01:CDS 35.0%
AACCTTGATTTAGTGCTTCT+AGG + Chr3:71409724-71409743 None:intergenic 35.0%
AAGAACTACTTGGAAAGAGT+GGG - Chr3:71410755-71410774 MsG0380015525.01.T01:intron 35.0%
ACAGTGCAGTGAAGAAAATA+AGG - Chr3:71409013-71409032 MsG0380015525.01.T01:CDS 35.0%
ACATGTTTGACATCACTAGA+AGG + Chr3:71409523-71409542 None:intergenic 35.0%
ACTATCCTTGGATTCTTTCT+TGG + Chr3:71408529-71408548 None:intergenic 35.0%
ACTTCATGTTGTGGATGATA+TGG - Chr3:71407826-71407845 MsG0380015525.01.T01:intron 35.0%
AGACATAAACCAAACCTAGA+AGG + Chr3:71405643-71405662 None:intergenic 35.0%
AGATGATATACTTAGGGAGA+TGG - Chr3:71410845-71410864 MsG0380015525.01.T01:intron 35.0%
ATCATGTTCACAACTATCCT+TGG + Chr3:71408541-71408560 None:intergenic 35.0%
ATTCGCACACAGAAAATACA+TGG - Chr3:71409645-71409664 MsG0380015525.01.T01:intron 35.0%
CACAATCTAGATTACTCGTT+GGG - Chr3:71407087-71407106 MsG0380015525.01.T01:intron 35.0%
CAGATATTCGGATAAGATCA+AGG - Chr3:71406168-71406187 MsG0380015525.01.T01:CDS 35.0%
CAGTTAAGGACAAATCATTC+AGG + Chr3:71406693-71406712 None:intergenic 35.0%
CATCAAGTATCAAGATTCCA+GGG + Chr3:71409690-71409709 None:intergenic 35.0%
CCTATAAGGCTTAATTTCAG+AGG + Chr3:71407036-71407055 None:intergenic 35.0%
CTCTTTGTAAATTGTAGGTG+TGG - Chr3:71406796-71406815 MsG0380015525.01.T01:intron 35.0%
CTTACTGGAATAGACGTAAA+TGG + Chr3:71406284-71406303 None:intergenic 35.0%
GAAGAAAAATCCAACTCAAG+TGG - Chr3:71409245-71409264 MsG0380015525.01.T01:CDS 35.0%
GAAGAACTAGATCATAAAGG+CGG - Chr3:71407944-71407963 MsG0380015525.01.T01:CDS 35.0%
GACATAAACCAAACCTAGAA+GGG + Chr3:71405642-71405661 None:intergenic 35.0%
GCAAAATCAATGATTCTTCC+TGG - Chr3:71409487-71409506 MsG0380015525.01.T01:intron 35.0%
GCAAAATGGCAAAGAGATTA+TGG - Chr3:71410458-71410477 MsG0380015525.01.T01:intron 35.0%
GCACTTTGTCATCAGATATT+CGG - Chr3:71406156-71406175 MsG0380015525.01.T01:CDS 35.0%
GCTCAGAACAAATCTTACTT+TGG + Chr3:71410337-71410356 None:intergenic 35.0%
GCTTATAAAGTTAGCTGCAA+AGG - Chr3:71405420-71405439 MsG0380015525.01.T01:CDS 35.0%
GGAAGAAAATCCTGATGATT+TGG - Chr3:71408129-71408148 MsG0380015525.01.T01:CDS 35.0%
GGAATCTTGATACTTGATGA+AGG - Chr3:71409691-71409710 MsG0380015525.01.T01:intron 35.0%
GGCGAAAAGAGTTCAAAAAA+TGG - Chr3:71409398-71409417 MsG0380015525.01.T01:intron 35.0%
GTCGTACACATCAATAAAAC+CGG + Chr3:71410049-71410068 None:intergenic 35.0%
TACTGTAAATGAGAAGTGGA+AGG - Chr3:71408051-71408070 MsG0380015525.01.T01:CDS 35.0%
TATGATGATCAAGGTTCACT+TGG - Chr3:71406897-71406916 MsG0380015525.01.T01:CDS 35.0%
TATTATGTTGAAGCCTTTGG+AGG + Chr3:71406983-71407002 None:intergenic 35.0%
TCAAGTGATGAAGAAGTTGA+TGG - Chr3:71407746-71407765 MsG0380015525.01.T01:intron 35.0%
TCACAATCTAGATTACTCGT+TGG - Chr3:71407086-71407105 MsG0380015525.01.T01:intron 35.0%
TCATCAAGTATCAAGATTCC+AGG + Chr3:71409691-71409710 None:intergenic 35.0%
TCTAAATACAGAAGGAAAGG+CGG - Chr3:71409886-71409905 MsG0380015525.01.T01:CDS 35.0%
TGATAAAAAAAAGGGCAACC+CGG - Chr3:71406379-71406398 MsG0380015525.01.T01:CDS 35.0%
TGATACCAAGAAAGAATCCA+AGG - Chr3:71408521-71408540 MsG0380015525.01.T01:CDS 35.0%
TGTATTCATTTCTTCCCACA+AGG + Chr3:71408158-71408177 None:intergenic 35.0%
TTATCTTCTTGATGGAACTG+CGG - Chr3:71408192-71408211 MsG0380015525.01.T01:CDS 35.0%
TTCCACTTCTCATTTACAGT+AGG + Chr3:71408052-71408071 None:intergenic 35.0%
TTGTGGAAGATCCTTCTAAA+TGG - Chr3:71410805-71410824 MsG0380015525.01.T01:intron 35.0%
TTTATTGATGTGTACGACAG+TGG - Chr3:71410051-71410070 MsG0380015525.01.T01:intron 35.0%
TTTCTTTGGCATAACATTGC+TGG - Chr3:71409200-71409219 MsG0380015525.01.T01:CDS 35.0%
! AAGCAGTATTGAATGGATCA+TGG - Chr3:71406060-71406079 MsG0380015525.01.T01:CDS 35.0%
! ACACATAAACCATTTTCTGC+TGG + Chr3:71410692-71410711 None:intergenic 35.0%
! AGCTAGACTTGTTTGAAAGA+GGG - Chr3:71410493-71410512 MsG0380015525.01.T01:intron 35.0%
! ATTTTGTCTATTGCTTGCTC+CGG - Chr3:71408918-71408937 MsG0380015525.01.T01:CDS 35.0%
! CTGAAATTAAGCCTTATAGG+TGG - Chr3:71407036-71407055 MsG0380015525.01.T01:CDS 35.0%
! GATGTGTTGAATTTGGAGTA+CGG - Chr3:71407704-71407723 MsG0380015525.01.T01:intron 35.0%
! GATTTTTCTTCCATGAGTGA+TGG + Chr3:71409236-71409255 None:intergenic 35.0%
! GCATTTGAAGCAGTATTGAA+TGG - Chr3:71406053-71406072 MsG0380015525.01.T01:CDS 35.0%
! TCTCCTCTTTGTACCTTTTT+GGG + Chr3:71408992-71409011 None:intergenic 35.0%
! TTCTCCTCTTTGTACCTTTT+TGG + Chr3:71408993-71409012 None:intergenic 35.0%
!! ATCCTAGAAGCACTAAATCA+AGG - Chr3:71409719-71409738 MsG0380015525.01.T01:intron 35.0%
!! ATGTTGACTTACCAAACACT+TGG - Chr3:71406761-71406780 MsG0380015525.01.T01:intron 35.0%
!! ATTGTTCTGAAACAATGTGC+CGG + Chr3:71409794-71409813 None:intergenic 35.0%
!! CCTCTGAAATTAAGCCTTAT+AGG - Chr3:71407033-71407052 MsG0380015525.01.T01:CDS 35.0%
!! TGCATCTTTTCTTCAAGTTC+AGG + Chr3:71409155-71409174 None:intergenic 35.0%
!!! AGCTTCTAGAGTGATTTTTC+TGG - Chr3:71410608-71410627 MsG0380015525.01.T01:intron 35.0%
!!! GATTTTGAAACCAAATGGGA+AGG - Chr3:71407848-71407867 MsG0380015525.01.T01:intron 35.0%
!!! GATTTTTAGTGAGGAGTTTG+TGG - Chr3:71410788-71410807 MsG0380015525.01.T01:intron 35.0%
AAAATGGAAGATTCCTGTGC+CGG - Chr3:71409414-71409433 MsG0380015525.01.T01:intron 40.0%
AACAGCCTCTTGTGTAAAAC+AGG + Chr3:71406465-71406484 None:intergenic 40.0%
AAGCCATCACATGAAGTTGA+AGG - Chr3:71407350-71407369 MsG0380015525.01.T01:intron 40.0%
AAGCCTTCAACTTCATGTGA+TGG + Chr3:71407356-71407375 None:intergenic 40.0%
AATTCCAGGTCGTAAAAAGC+TGG + Chr3:71406216-71406235 None:intergenic 40.0%
ACAGCCTCTTGTGTAAAACA+GGG + Chr3:71406464-71406483 None:intergenic 40.0%
AGACTTGAATCCTCTTCAAC+CGG - Chr3:71405361-71405380 MsG0380015525.01.T01:CDS 40.0%
AGCCTACTGTAAATGAGAAG+TGG - Chr3:71408047-71408066 MsG0380015525.01.T01:CDS 40.0%
AGCGTACAAAGTCTTTACAC+TGG - Chr3:71408392-71408411 MsG0380015525.01.T01:CDS 40.0%
ATCAAAAGCTCAACCTCAAG+AGG + Chr3:71410195-71410214 None:intergenic 40.0%
ATTGATGAGGAGAAGATGCA+GGG - Chr3:71409997-71410016 MsG0380015525.01.T01:CDS 40.0%
CTCTTCTTCAGATTCAGAAG+AGG - Chr3:71407502-71407521 MsG0380015525.01.T01:CDS 40.0%
CTCTTGTGTAAAACAGGGTA+AGG + Chr3:71406459-71406478 None:intergenic 40.0%
GAAAAATCCAACTCAAGTGG+TGG - Chr3:71409248-71409267 MsG0380015525.01.T01:intron 40.0%
GAAAGAACGTCATTTGCTTG+AGG - Chr3:71409921-71409940 MsG0380015525.01.T01:CDS 40.0%
GAAATGTATCCCTTCCCATT+TGG + Chr3:71407861-71407880 None:intergenic 40.0%
GAACATTGATCGGATTTGTG+AGG + Chr3:71406855-71406874 None:intergenic 40.0%
GAAGAACTACTTGGAAAGAG+TGG - Chr3:71410754-71410773 MsG0380015525.01.T01:intron 40.0%
GCATGCCACATTCAAAATCA+TGG + Chr3:71405843-71405862 None:intergenic 40.0%
GGAATATACTGTCTTCGATG+TGG - Chr3:71408582-71408601 MsG0380015525.01.T01:CDS 40.0%
GTGTATCAGTTATTGACGAC+CGG - Chr3:71410708-71410727 MsG0380015525.01.T01:intron 40.0%
GTTGTTGAGAAGTTGGAAGT+TGG - Chr3:71407425-71407444 MsG0380015525.01.T01:intron 40.0%
GTTGTTGTCATGTGACTGAA+AGG + Chr3:71406508-71406527 None:intergenic 40.0%
TATTGATGAGGAGAAGATGC+AGG - Chr3:71409996-71410015 MsG0380015525.01.T01:CDS 40.0%
TCAAAAGCTCAACCTCAAGA+GGG + Chr3:71410194-71410213 None:intergenic 40.0%
TCAACTTCATGTGATGGCTT+TGG + Chr3:71407350-71407369 None:intergenic 40.0%
TCAATCAATGCTTGTGCTGA+AGG - Chr3:71410570-71410589 MsG0380015525.01.T01:intron 40.0%
TCTGATGAATCCCACCTATA+AGG + Chr3:71407050-71407069 None:intergenic 40.0%
TCTTCAGATTCAGAAGAGGA+TGG - Chr3:71407506-71407525 MsG0380015525.01.T01:CDS 40.0%
TGTATCAGTTATTGACGACC+GGG - Chr3:71410709-71410728 MsG0380015525.01.T01:intron 40.0%
TTGACATCACTAGAAGGTCT+TGG + Chr3:71409517-71409536 None:intergenic 40.0%
TTGTGTTATATCACATGCCC+TGG - Chr3:71409271-71409290 MsG0380015525.01.T01:intron 40.0%
! AGGTTGTGTTGTTGAGAAGT+TGG - Chr3:71407418-71407437 MsG0380015525.01.T01:intron 40.0%
! ATGCCCAAAAAGGTACAAAG+AGG - Chr3:71408986-71409005 MsG0380015525.01.T01:CDS 40.0%
! CTTACCCTGTTTTACACAAG+AGG - Chr3:71406457-71406476 MsG0380015525.01.T01:CDS 40.0%
! GAAGCACTAAATCAAGGTTG+AGG - Chr3:71409725-71409744 MsG0380015525.01.T01:intron 40.0%
! GAGCTAGACTTGTTTGAAAG+AGG - Chr3:71410492-71410511 MsG0380015525.01.T01:intron 40.0%
! TGATGATTTGGATGCCTTGT+GGG - Chr3:71408141-71408160 MsG0380015525.01.T01:CDS 40.0%
! TGATTTTTCTGGACTCTGAG+TGG - Chr3:71410619-71410638 MsG0380015525.01.T01:intron 40.0%
! TGCTCTAACTAGTTTCTGCA+AGG + Chr3:71405949-71405968 None:intergenic 40.0%
! TTCTCTGCTTGCCATTTAGA+AGG + Chr3:71410819-71410838 None:intergenic 40.0%
!! AATTCTTCTGAGACTCTTCC+TGG - Chr3:71410075-71410094 MsG0380015525.01.T01:intron 40.0%
!! GTTGAGCTTTTGATAACCCT+CGG - Chr3:71410201-71410220 MsG0380015525.01.T01:intron 40.0%
!! TGGTGCTGATGTGTTGAATT+TGG - Chr3:71407697-71407716 MsG0380015525.01.T01:intron 40.0%
!!! TGCAACTAAGTTTTTTGCGG+AGG - Chr3:71410263-71410282 MsG0380015525.01.T01:intron 40.0%
AACACAACCACCACTTGAGT+TGG + Chr3:71409258-71409277 None:intergenic 45.0%
AAGAAAGGTCACGGGTAACT+TGG + Chr3:71406544-71406563 None:intergenic 45.0%
ACACAACCTACGTAACGTTC+AGG + Chr3:71407407-71407426 None:intergenic 45.0%
ACACCCTAGTGTTCTTGTCA+TGG - Chr3:71409579-71409598 MsG0380015525.01.T01:intron 45.0%
ACAGTAGGCTCTTCTTCAGT+TGG + Chr3:71408037-71408056 None:intergenic 45.0%
ACTTAGGGAGATGGTTGAAG+AGG - Chr3:71410854-71410873 MsG0380015525.01.T01:intron 45.0%
AGCCCATGACAAGAACACTA+GGG + Chr3:71409585-71409604 None:intergenic 45.0%
AGGGCTTTCTCTCAATGCTT+TGG + Chr3:71409671-71409690 None:intergenic 45.0%
ATTCAATGCTGATGCCTGCA+AGG - Chr3:71407973-71407992 MsG0380015525.01.T01:CDS 45.0%
ATTTCCAAGGAAACGACCTC+TGG - Chr3:71409345-71409364 MsG0380015525.01.T01:intron 45.0%
CAAAAACCACACTCTACACG+TGG - Chr3:71409377-71409396 MsG0380015525.01.T01:intron 45.0%
CAATCTATAGCCGGTTGAAG+AGG + Chr3:71405374-71405393 None:intergenic 45.0%
CACCCTAGTGTTCTTGTCAT+GGG - Chr3:71409580-71409599 MsG0380015525.01.T01:intron 45.0%
CCAGTTCCTTACAAATCGGA+GGG + Chr3:71406589-71406608 None:intergenic 45.0%
CGGCCATGGATAAGATAAAC+CGG + Chr3:71409436-71409455 None:intergenic 45.0%
CTAGAAGGTCTTGGAAATCC+AGG + Chr3:71409508-71409527 None:intergenic 45.0%
CTCTATGGAACCATCACTCA+TGG - Chr3:71409223-71409242 MsG0380015525.01.T01:CDS 45.0%
CTGGGTGAACTCTGGATTAA+CGG + Chr3:71406614-71406633 None:intergenic 45.0%
CTTATCTTCTTCCATCGACC+CGG + Chr3:71410730-71410749 None:intergenic 45.0%
GAGGAAGAGACTTCATGTTG+TGG - Chr3:71407817-71407836 MsG0380015525.01.T01:intron 45.0%
GATAGGTGGAATGCCCAAAA+AGG - Chr3:71408976-71408995 MsG0380015525.01.T01:CDS 45.0%
GTCATGTGACTGAAAGGTCA+CGG + Chr3:71406502-71406521 None:intergenic 45.0%
GTCTTGGCAAGATACAGAAG+TGG - Chr3:71409551-71409570 MsG0380015525.01.T01:intron 45.0%
GTGCTGCGAAAAATCACTTC+CGG - Chr3:71410027-71410046 MsG0380015525.01.T01:CDS 45.0%
GTGGAAGGAAACAAGCATGT+TGG - Chr3:71408066-71408085 MsG0380015525.01.T01:CDS 45.0%
TAGCCCATGACAAGAACACT+AGG + Chr3:71409586-71409605 None:intergenic 45.0%
TCAAGGTTCACTTGGTACAG+AGG - Chr3:71406905-71406924 MsG0380015525.01.T01:CDS 45.0%
TCAGATTCAGAAGAGGATGG+TGG - Chr3:71407509-71407528 MsG0380015525.01.T01:CDS 45.0%
TCATGTGACTGAAAGGTCAC+GGG + Chr3:71406501-71406520 None:intergenic 45.0%
TGGATAAGATAAACCGGCAC+AGG + Chr3:71409430-71409449 None:intergenic 45.0%
TGGGTGAACTCTGGATTAAC+GGG + Chr3:71406613-71406632 None:intergenic 45.0%
TGGTGGTAAGAGGGATCAAA+AGG - Chr3:71407526-71407545 MsG0380015525.01.T01:CDS 45.0%
! ACCATGGATGTATTGATCCG+AGG + Chr3:71410221-71410240 None:intergenic 45.0%
! AGAAAGGTTTTTCCTGCTCC+AGG + Chr3:71409292-71409311 None:intergenic 45.0%
! AGAAGAGGATGGTGGTAAGA+GGG - Chr3:71407517-71407536 MsG0380015525.01.T01:CDS 45.0%
! CACAAGGCATCCAAATCATC+AGG + Chr3:71408142-71408161 None:intergenic 45.0%
! CACGTGTAGAGTGTGGTTTT+TGG + Chr3:71409379-71409398 None:intergenic 45.0%
! CCATGGATGTATTGATCCGA+GGG + Chr3:71410220-71410239 None:intergenic 45.0%
! CTGATGATTTGGATGCCTTG+TGG - Chr3:71408140-71408159 MsG0380015525.01.T01:CDS 45.0%
! GAAAGGTTTTTCCTGCTCCA+GGG + Chr3:71409291-71409310 None:intergenic 45.0%
! GTTGGTTTCCCTTCTAGGTT+TGG - Chr3:71405631-71405650 MsG0380015525.01.T01:CDS 45.0%
! TAAACCATTTTCTGCTGGCC+CGG + Chr3:71410687-71410706 None:intergenic 45.0%
! TCTGAACCCTCCGATTTGTA+AGG - Chr3:71406580-71406599 MsG0380015525.01.T01:CDS 45.0%
! TGACGGTGATGGCAAGTTTA+AGG - Chr3:71407604-71407623 MsG0380015525.01.T01:intron 45.0%
! TTACACAAGAGGCTGTTTCC+AGG - Chr3:71406468-71406487 MsG0380015525.01.T01:CDS 45.0%
!! AAAGCATTGAGAGAAAGCCC+TGG - Chr3:71409670-71409689 MsG0380015525.01.T01:intron 45.0%
!! ACTTCATGTGATGGCTTTGG+TGG + Chr3:71407347-71407366 None:intergenic 45.0%
!! CGTTTGTTGGTTTCCCTTCT+AGG - Chr3:71405626-71405645 MsG0380015525.01.T01:CDS 45.0%
!! GCATAACATTGCTGGCTCTA+TGG - Chr3:71409208-71409227 MsG0380015525.01.T01:CDS 45.0%
!! GTGCCGGTTTATCTTATCCA+TGG - Chr3:71409430-71409449 MsG0380015525.01.T01:intron 45.0%
!!! AGAGTGTGGTTTTTGGAGCT+AGG + Chr3:71409372-71409391 None:intergenic 45.0%
!!! GCAGCTGTTTTGATCAACCA+TGG + Chr3:71410237-71410256 None:intergenic 45.0%
AAACAGGGTAAGGCTGCGTA+TGG + Chr3:71406449-71406468 None:intergenic 50.0%
ACTAGACTTAACGTCGCTCC+TGG + Chr3:71406633-71406652 None:intergenic 50.0%
CCCTCGGATCAATACATCCA+TGG - Chr3:71410217-71410236 MsG0380015525.01.T01:intron 50.0%
CGTTAATCCAGAGTTCACCC+AGG - Chr3:71406612-71406631 MsG0380015525.01.T01:intron 50.0%
CTAGACTTAACGTCGCTCCT+GGG + Chr3:71406632-71406651 None:intergenic 50.0%
CTCAACCTCAAGAGGGTAAC+TGG + Chr3:71410187-71410206 None:intergenic 50.0%
CTGTCGTCGAACTTGAACCT+GGG + Chr3:71409468-71409487 None:intergenic 50.0%
GAATGGATCATGGCAACCTG+TGG - Chr3:71406070-71406089 MsG0380015525.01.T01:CDS 50.0%
GAGTACCAGTTACCCTCTTG+AGG - Chr3:71410179-71410198 MsG0380015525.01.T01:intron 50.0%
GCCAGTTCCTTACAAATCGG+AGG + Chr3:71406590-71406609 None:intergenic 50.0%
GGGGCCAGTTCCTTACAAAT+CGG + Chr3:71406593-71406612 None:intergenic 50.0%
GGGTGAACTCTGGATTAACG+GGG + Chr3:71406612-71406631 None:intergenic 50.0%
GTACAGCCTGAACGTTACGT+AGG - Chr3:71407398-71407417 MsG0380015525.01.T01:intron 50.0%
TATATCACATGCCCTGGAGC+AGG - Chr3:71409277-71409296 MsG0380015525.01.T01:intron 50.0%
TGTCGTCGAACTTGAACCTG+GGG + Chr3:71409467-71409486 None:intergenic 50.0%
! AGCATCGAAAAGCGATGACG+AGG - Chr3:71408108-71408127 MsG0380015525.01.T01:CDS 50.0%
! CAGAAGAGGATGGTGGTAAG+AGG - Chr3:71407516-71407535 MsG0380015525.01.T01:CDS 50.0%
! CCCTCCGATTTGTAAGGAAC+TGG - Chr3:71406586-71406605 MsG0380015525.01.T01:CDS 50.0%
! TATTGCACGCGCTTTTCGAC+CGG - Chr3:71410665-71410684 MsG0380015525.01.T01:intron 50.0%
! TGCTCCAGCTTTTTACGACC+TGG - Chr3:71406209-71406228 MsG0380015525.01.T01:CDS 50.0%
! TTTTCGCCACGTGTAGAGTG+TGG + Chr3:71409386-71409405 None:intergenic 50.0%
!!! GTTTTTGGAGCTAGGACCAG+AGG + Chr3:71409364-71409383 None:intergenic 50.0%
AAGGTCACGGGTTCAAGTCC+TGG + Chr3:71406489-71406508 None:intergenic 55.0%
ACTAGAGCTCCCGCATATGC+AGG - Chr3:71406405-71406424 MsG0380015525.01.T01:CDS 55.0%
AGGACCAGAGGTCGTTTCCT+TGG + Chr3:71409352-71409371 None:intergenic 55.0%
AGGGTAAGGCTGCGTATGGT+GGG + Chr3:71406445-71406464 None:intergenic 55.0%
CTAGAGCTCCCGCATATGCA+GGG - Chr3:71406406-71406425 MsG0380015525.01.T01:CDS 55.0%
GCTGTCGTCGAACTTGAACC+TGG + Chr3:71409469-71409488 None:intergenic 55.0%
GCTTGCGACGTTCGAAACGT+AGG - Chr3:71407372-71407391 MsG0380015525.01.T01:intron 55.0%
GTTATTGACGACCGGGTCGA+TGG - Chr3:71410716-71410735 MsG0380015525.01.T01:intron 55.0%
TTGAACCTGGGGAGGTTCGA+CGG + Chr3:71409456-71409475 None:intergenic 55.0%
! ATTGCACGCGCTTTTCGACC+GGG - Chr3:71410666-71410685 MsG0380015525.01.T01:intron 55.0%
CAGGGTAAGGCTGCGTATGG+TGG + Chr3:71406446-71406465 None:intergenic 60.0%
CATATGCAGGGTCCGGGAAG+GGG - Chr3:71406418-71406437 MsG0380015525.01.T01:CDS 60.0%
CGTCGAACTTGAACCTGGGG+AGG + Chr3:71409464-71409483 None:intergenic 60.0%
CTTCCCGGACCCTGCATATG+CGG + Chr3:71406418-71406437 None:intergenic 60.0%
GCATATGCAGGGTCCGGGAA+GGG - Chr3:71406417-71406436 MsG0380015525.01.T01:CDS 60.0%
TCGACCGGGCCAGCAGAAAA+TGG - Chr3:71410680-71410699 MsG0380015525.01.T01:intron 60.0%
TTCCCGGACCCTGCATATGC+GGG + Chr3:71406417-71406436 None:intergenic 60.0%
! ATGCGGGAGCTCTAGTGCAC+CGG + Chr3:71406401-71406420 None:intergenic 60.0%
CGCATATGCAGGGTCCGGGA+AGG - Chr3:71406416-71406435 MsG0380015525.01.T01:CDS 65.0%
CGTCGCTCCTGGGTGAACTC+TGG + Chr3:71406622-71406641 None:intergenic 65.0%
CTCCCGCATATGCAGGGTCC+GGG - Chr3:71406412-71406431 MsG0380015525.01.T01:CDS 65.0%
GCTCCCGCATATGCAGGGTC+CGG - Chr3:71406411-71406430 MsG0380015525.01.T01:CDS 65.0%
! CGTATGGTGGGACCCCTTCC+CGG + Chr3:71406433-71406452 None:intergenic 65.0%
! TGCGGGAGCTCTAGTGCACC+GGG + Chr3:71406400-71406419 None:intergenic 65.0%
CATGGCCGTCGAACCTCCCC+AGG - Chr3:71409448-71409467 MsG0380015525.01.T01:intron 70.0%
CTGGGGAGGTTCGACGGCCA+TGG + Chr3:71409450-71409469 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
Chr3 gene 71405145 71410932 71405145 ID=MsG0380015525.01;Name=MsG0380015525.01
Chr3 mRNA 71405145 71410932 71405145 ID=MsG0380015525.01.T01;Parent=MsG0380015525.01;Name=MsG0380015525.01.T01;_AED=0.20;_eAED=0.20;_QI=0|0|0|1|0.8|0.66|6|0|1209
Chr3 exon 71410875 71410932 71410875 ID=MsG0380015525.01.T01:exon:23805;Parent=MsG0380015525.01.T01
Chr3 exon 71409779 71410053 71409779 ID=MsG0380015525.01.T01:exon:23804;Parent=MsG0380015525.01.T01
Chr3 exon 71407864 71409264 71407864 ID=MsG0380015525.01.T01:exon:23803;Parent=MsG0380015525.01.T01
Chr3 exon 71407433 71407579 71407433 ID=MsG0380015525.01.T01:exon:23802;Parent=MsG0380015525.01.T01
Chr3 exon 71406811 71407096 71406811 ID=MsG0380015525.01.T01:exon:23801;Parent=MsG0380015525.01.T01
Chr3 exon 71405145 71406607 71405145 ID=MsG0380015525.01.T01:exon:23800;Parent=MsG0380015525.01.T01
Chr3 CDS 71410875 71410932 71410875 ID=MsG0380015525.01.T01:cds;Parent=MsG0380015525.01.T01
Chr3 CDS 71409779 71410053 71409779 ID=MsG0380015525.01.T01:cds;Parent=MsG0380015525.01.T01
Chr3 CDS 71407864 71409264 71407864 ID=MsG0380015525.01.T01:cds;Parent=MsG0380015525.01.T01
Chr3 CDS 71407433 71407579 71407433 ID=MsG0380015525.01.T01:cds;Parent=MsG0380015525.01.T01
Chr3 CDS 71406811 71407096 71406811 ID=MsG0380015525.01.T01:cds;Parent=MsG0380015525.01.T01
Chr3 CDS 71405145 71406607 71405145 ID=MsG0380015525.01.T01:cds;Parent=MsG0380015525.01.T01
Gene Sequence

>MsG0380015525.01.T01

ATGGCGCCCATAAAAAGGCATTTGCATCAATGGAAGCATCCATTCGATGCTAATTATCTTGCTTCCCCTAATTCTTGTTTCAAAACAGCATTTGAAGCAGTATTGAATGGATCATGGCAACCTGTGGAACTCTTAAAAATAGAGTCAGGAAAAACTACCTTACGTTTCATTGATACTGAACAAATTCAAAGCACTTTGTCATCAGATATTCGGATAAGATCAAGGAAAGCTACTTCATCTGATTGCTCCAGCTTTTTACGACCTGGAATTGATATATCTATGCTATTAGGCTATCGATACAATGATAATTCAGATCCATTTACGTCTATTCCAGTGTGGATTGATGCAAGAATAAATTCTATACATAGACAGCCTCACAAATCCGATCAATGTTCATGTCAATTTTATGTTAACTTATATGATGATCAAGGTTCACTTGGTACAGAGGTAAAAACTCTTAATAAAGAGGTTAATGCAATTGAAATAGATCAAATTTTCATCCTCCAAAGGCTTCAACATAATACTTGTGAAGGCTTGTTAAAAGAAAATGATACCTCTGAAATTAAGCCTTATAGGTGGGATTCATCAGAAGATTGCTCTTCATTATCACAATCTAGATTACTCGTTGGGAAATTTTCATCTGATCTTTCGTGGTTTGTAATTACATCTTTTTTAAAGAAGGTTTCATTCCATATAAGATCTGTGCAAAACAAGATTGTGTATCAAGTTATGGGGAATGATACTGATATTATTAGTCCTTGGCTTATAAATGTTGTGAACTTCAGCTTAAAAAAGGAATCACTAGTACCTATTGTTTCTCAATTTGATGTATTTTATGATTATGATGGAGAAGAAGATGAAGAGCCACCAAAGCCATCACATGAAGTTGAAGGCTTGCGACGTTCGAAACGTAGGAATGTACAGCCTGAACGTTACGTAGGTTGTGTTGTTGAGAAGTTGGAAGTTGGTAATTTTCGAACGTGTCCCTACAAGAGAACAACTTATATGATAGAAGATGAAAACTCTTCTTCAGATTCAGAAGAGGATGGTGGTAAGAGGGATCAAAAGGTTAATAAGCTAAATCATTGCAAAGCTATTAATGTGAACACAAGGAACAAAAATTCTGACGGTGATGGCAAGTTTAAGGTACATAAAACTGATGACATTTCTTCCAAATATCATTATTTGACTAATTATATTTCTTGTGCAAAGAAGAATGGTGCTGATGTGTTGAATTTGGAGTACGGCAATGAGCCTACAACAATATCAAGTGATGAAGAAGTTGATGGTAATGTTACTTTGAGAAATTATAATAGTTTCTTTAAAGAGAAGATAAAGAGGAAGAGACTTCATGTTGTGGATGATATGGATTTTGAAACCAAATGGGAAGGGATACATTTCAAAAAAGAAGCTCCAACAGAAAATTTTCATTCGAGTTATTCGTCTAACAGAAGTCATGTTCATGAAGAACTAGATCATAAAGGCGGTAGAACATTCAATGCTGATGCCTGCAAGGAAATAATAGATAGTTACATGAAGAATTTTGATAGTCTACCAACTGAAGAAGAGCCTACTGTAAATGAGAAGTGGAAGGAAACAAGCATGTTGGAGAAAAAGGAAGAAGAAAAAGCATCGAAAAGCGATGACGAGGAAGAAAATCCTGATGATTTGGATGCCTTGTGGGAAGAAATGAATACAGCTTTGACATCAAGTTATCTTCTTGATGGAACTGCGGGTTCAACTGCAGAGTTTGTAGCTGATACCAAGAAAGAATCCAAGGATAGTTGTGAACATGATTATAGATTGGATGAAGAAATTGGAATATACTGTCTTCGATGTGGATTTGTGAAAACTGCAATACGAGACATTTCTGAGCCATTTGTGGAATGCCCAAAAAGGTACAAAGAGGAGAAACAGTGCAGTGAAGAAAATAAGGAACATAAATCAGAGCCAAAAGTTGATGAAGATTATAATAATGATATGTTCTCGACTCATGCTACTGATCCTGATGAACCATTGATTAATGAAATCGACAACGTTTGGGAATTGATTCCTGAACTTGAAGAAAAGATGCATGAACACCAGAAAAAAGCTTTTGAATTTCTTTGGCATAACATTGCTGGCTCTATGGAACCATCACTCATGGAAGAAAAATCCAACTCAAGTGGTTCAAGTTCGACGACAGCAAAATCAATGATTCTTCCTGGATTTCCAAGACCTTCTAGTGATGTCAAACATGTTTTGGATTGTCTTGGCAAGATACAGAAGTGGCACTCACACCCTAGTGTTCTTGTCATGGGCTATACTTCATTTTTACAATTAATGAGATCAAAAGATACAAAATTCGCACACAGAAAATACATGGCCAAAGCATTGAGAGAAAGCCCTGGAATCTTGATACTTGATGAAGGACACAATCCTAGAAGCACTAAATCAAGGTTGAGGAAATGTTTAATGAAACTTCCAACAGAATTGAGAATATTACTCTCCGGCACATTGTTTCAGAACAATTTTGGTGAATATTTCAACACACTTTGTTTAGCTAGACCGAAATTTATTCATGAAGTTCTACAAGAGTTAGATTCTAAATACAGAAGGAAAGGCGGAAAAGTTGCGAAGAAAGAACGTCATTTGCTTGAGGCACGCGCAAGAAAATTCTTCTTGAACAACATTGAAAAGAAAATTAACTCAGATATTGATGAGGAGAAGATGCAGGGTCTATATGTGCTGCGAAAAATCACTTCCGGTTTTATTGATGTGTACGACAGTGGAAATTCTTCTGAGACTCTTCCTGGTTTACAAATATATACATTGCTCATGAATACGTCCGATGAACAACATGAGATTGTACAGAAACTTCAGAAGAAAATGGCTGAGAGTACCAGTTACCCTCTTGAGGTTGAGCTTTTGATAACCCTCGGATCAATACATCCATGGTTGATCAAAACAGCTGCATCATGTGCAACTAAGTTTTTTGCGGAGGAAGAATTGAAGAAACTAGAAACAAGCAAATTTGATTTGAGAAAAGGTTCCAAAGTAAGATTTGTTCTGAGCCTAATCTCACGAGTAATGAAAAATGAAAAGGTTCTTATCTTTTGTCACAATCTTGCACCTGTGAGATTCTTAATAGAGTTATTTGAGAAATATTTTCAGTGGCAAAATGGCAAAGAGATTATGGTACTAACAGGTGAGCTAGACTTGTTTGAAAGAGGGAAAGTGATAGATAAATTTGAAGATCAAAGCAGCGGTTCAAAGATACTTCTTGCTTCAATCAATGCTTGTGCTGAAGGTATAAGTTTAACAGCAGCTTCTAGAGTGATTTTTCTGGACTCTGAGTGGAATCCTTCAAAAACAAAGCAAGCTATTGCACGCGCTTTTCGACCGGGCCAGCAGAAAATGGTTTATGTGTATCAGTTATTGACGACCGGGTCGATGGAAGAAGATAAGTATAGAAGAACTACTTGGAAAGAGTGGGTTTCTTGCATGATTTTTAGTGAGGAGTTTGTGGAAGATCCTTCTAAATGGCAAGCAGAGAAGATTGAAGATGATATACTTAGGGAGATGGTTGAAGAGGATAAGTCTAAAGCTATTCACATGATTATGAAGAATGAAAAGGCTTCAACAATCTAA
Protein sequence

>MsG0380015525.01.T01

MAPIKRHLHQWKHPFDANYLASPNSCFKTAFEAVLNGSWQPVELLKIESGKTTLRFIDTEQIQSTLSSDIRIRSRKATSSDCSSFLRPGIDISMLLGYRYNDNSDPFTSIPVWIDARINSIHRQPHKSDQCSCQFYVNLYDDQGSLGTEVKTLNKEVNAIEIDQIFILQRLQHNTCEGLLKENDTSEIKPYRWDSSEDCSSLSQSRLLVGKFSSDLSWFVITSFLKKVSFHIRSVQNKIVYQVMGNDTDIISPWLINVVNFSLKKESLVPIVSQFDVFYDYDGEEDEEPPKPSHEVEGLRRSKRRNVQPERYVGCVVEKLEVGNFRTCPYKRTTYMIEDENSSSDSEEDGGKRDQKVNKLNHCKAINVNTRNKNSDGDGKFKVHKTDDISSKYHYLTNYISCAKKNGADVLNLEYGNEPTTISSDEEVDGNVTLRNYNSFFKEKIKRKRLHVVDDMDFETKWEGIHFKKEAPTENFHSSYSSNRSHVHEELDHKGGRTFNADACKEIIDSYMKNFDSLPTEEEPTVNEKWKETSMLEKKEEEKASKSDDEEENPDDLDALWEEMNTALTSSYLLDGTAGSTAEFVADTKKESKDSCEHDYRLDEEIGIYCLRCGFVKTAIRDISEPFVECPKRYKEEKQCSEENKEHKSEPKVDEDYNNDMFSTHATDPDEPLINEIDNVWELIPELEEKMHEHQKKAFEFLWHNIAGSMEPSLMEEKSNSSGSSSTTAKSMILPGFPRPSSDVKHVLDCLGKIQKWHSHPSVLVMGYTSFLQLMRSKDTKFAHRKYMAKALRESPGILILDEGHNPRSTKSRLRKCLMKLPTELRILLSGTLFQNNFGEYFNTLCLARPKFIHEVLQELDSKYRRKGGKVAKKERHLLEARARKFFLNNIEKKINSDIDEEKMQGLYVLRKITSGFIDVYDSGNSSETLPGLQIYTLLMNTSDEQHEIVQKLQKKMAESTSYPLEVELLITLGSIHPWLIKTAASCATKFFAEEELKKLETSKFDLRKGSKVRFVLSLISRVMKNEKVLIFCHNLAPVRFLIELFEKYFQWQNGKEIMVLTGELDLFERGKVIDKFEDQSSGSKILLASINACAEGISLTAASRVIFLDSEWNPSKTKQAIARAFRPGQQKMVYVYQLLTTGSMEEDKYRRTTWKEWVSCMIFSEEFVEDPSKWQAEKIEDDILREMVEEDKSKAIHMIMKNEKASTI*