AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0380015727.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380015727.01.T01 MTR_3g075270 82.317 164 29 0 169 332 144 307 1.02e-87 266
MsG0380015727.01.T01 MTR_4g104140 46.099 141 73 2 169 306 125 265 1.46e-34 128
MsG0380015727.01.T01 MTR_4g104140 46.099 141 73 2 169 306 195 335 1.68e-34 129
MsG0380015727.01.T01 MTR_8g077280 79.032 62 13 0 10 71 158 219 2.75e-24 101
MsG0380015727.01.T01 MTR_5g015680 37.000 100 63 0 187 286 169 268 2.78e-19 86.7
MsG0380015727.01.T01 MTR_5g015680 36.634 101 64 0 186 286 263 363 4.24e-19 87.4
MsG0380015727.01.T01 MTR_5g015680 36.634 101 64 0 186 286 302 402 6.39e-19 87.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380015727.01.T01 AT3G48360 42.222 135 67 3 169 292 110 244 1.09e-23 98.6
MsG0380015727.01.T01 AT3G48360 46.610 118 52 3 186 292 233 350 1.25e-23 100
MsG0380015727.01.T01 AT5G63160 49.573 117 54 3 202 316 246 359 5.00e-23 98.6
MsG0380015727.01.T01 AT5G63160 49.573 117 54 3 202 316 161 274 7.86e-23 96.7
MsG0380015727.01.T01 AT5G67480 39.216 102 61 1 186 286 256 357 2.06e-19 88.6
MsG0380015727.01.T01 AT5G67480 39.216 102 61 1 186 286 256 357 2.06e-19 88.6
MsG0380015727.01.T01 AT5G67480 39.216 102 61 1 186 286 267 368 2.15e-19 88.6
MsG0380015727.01.T01 AT3G48360 48.810 84 33 2 186 259 233 316 1.56e-15 76.6
MsG0380015727.01.T01 AT5G63160 57.627 59 24 1 202 259 246 304 3.08e-15 75.5
MsG0380015727.01.T01 AT4G37610 38.614 101 60 2 187 286 252 351 6.54e-15 75.1
MsG0380015727.01.T01 AT1G05690 36.364 99 60 2 186 283 250 346 1.46e-13 71.2

Find 92 sgRNAs with CRISPR-Local

Find 327 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTCCACATGTCAAGCTTTGC+AGG 0.259755 3:-74289540 MsG0380015727.01.T01:CDS
ATGGATATAAATGTAAGTTT+TGG 0.269976 3:+74290566 None:intergenic
CATGCAAGGTTCCTCTTTGC+AGG 0.308788 3:-74289403 MsG0380015727.01.T01:intron
TACATTTCATCTACACTTCC+AGG 0.332926 3:-74290307 MsG0380015727.01.T01:CDS
GGGTTTGGAAGGGTATTTAT+AGG 0.337388 3:-74292846 MsG0380015727.01.T01:CDS
ATCATATGATGTGGAGATTA+CGG 0.355897 3:-74289582 MsG0380015727.01.T01:CDS
TCCAGTGCACGCAACCGTTC+TGG 0.358145 3:-74290520 MsG0380015727.01.T01:intron
GTACTATGCCACTAGGAGTA+TGG 0.365395 3:+74290547 None:intergenic
ACCAGAACGGTTGCGTGCAC+TGG 0.385474 3:+74290519 None:intergenic
AACACTTTACCACATGTAAT+AGG 0.401202 3:-74289508 MsG0380015727.01.T01:CDS
AGTCAAGAGAGTCTTCTAAT+TGG 0.402862 3:-74288629 MsG0380015727.01.T01:CDS
TCATATGATGTGGAGATTAC+GGG 0.403872 3:-74289581 MsG0380015727.01.T01:CDS
ATGTGAGAAATGGTGGGGTT+TGG 0.420060 3:-74292861 MsG0380015727.01.T01:CDS
CCTTGTCCTTAGCAATTGTA+AGG 0.421710 3:+74288698 None:intergenic
CAAGGAGAGATGAGGTAATT+CGG 0.427024 3:-74288680 MsG0380015727.01.T01:CDS
GAGAAGCCATTGGTTGAGTT+GGG 0.436115 3:+74290624 None:intergenic
TCTTCTTCCTTCTACAACCA+TGG 0.438005 3:+74292897 None:intergenic
AGAGAAGCCATTGGTTGAGT+TGG 0.440937 3:+74290623 None:intergenic
TGGAAAACCATGGTTGTAGA+AGG 0.453568 3:-74292904 MsG0380015727.01.T01:CDS
GTCCCCAGTTCTAAAAGAAA+TGG 0.455888 3:-74290390 MsG0380015727.01.T01:CDS
GGAAGGGTATTTATAGGGAG+GGG 0.456803 3:-74292840 MsG0380015727.01.T01:CDS
GAGGAACCTTGCATGCATCT+TGG 0.458524 3:+74289411 None:intergenic
TTGGAAGGGTATTTATAGGG+AGG 0.461629 3:-74292842 MsG0380015727.01.T01:CDS
GGTTTGGAAGGGTATTTATA+GGG 0.473354 3:-74292845 MsG0380015727.01.T01:CDS
GAGTTGGGAGTGAGGGAAAG+AGG 0.475424 3:+74290639 None:intergenic
AGGGTATTTATAGGGAGGGG+TGG 0.477271 3:-74292837 MsG0380015727.01.T01:CDS
TCCGGACCGCGTTAGTGTCA+TGG 0.489011 3:+74292714 None:intergenic
AACGGTTGCGTGCACTGGAA+AGG 0.491203 3:+74290524 None:intergenic
GAATACTAGAGTAGAGGAAG+AGG 0.495047 3:-74288658 MsG0380015727.01.T01:CDS
GAGAAATGGTGGGGTTTGGA+AGG 0.497803 3:-74292857 MsG0380015727.01.T01:CDS
AAACGTGTGGTGCAGACCAC+CGG 0.507144 3:-74292737 MsG0380015727.01.T01:CDS
CAAGAGAGTCTTCTAATTGG+TGG 0.514114 3:-74288626 MsG0380015727.01.T01:CDS
ACGGTTGCGTGCACTGGAAA+GGG 0.514421 3:+74290525 None:intergenic
AGAAGGAAGAAGAGGAGGAG+AGG 0.514597 3:-74292887 MsG0380015727.01.T01:CDS
AACGGTAACGTTAAAATATG+TGG 0.514946 3:-74290359 MsG0380015727.01.T01:CDS
AAGGCGATGGCTGCATTGGT+TGG 0.517717 3:+74290332 None:intergenic
GAGGATGATGTGAGAAATGG+TGG 0.522277 3:-74292868 MsG0380015727.01.T01:CDS
GGAGAGGATGATGTGAGAAA+TGG 0.524261 3:-74292871 MsG0380015727.01.T01:CDS
TCCACATGTCAAGCTTTGCA+GGG 0.524594 3:-74289539 MsG0380015727.01.T01:CDS
AGGGAAAGAGGTGTGAGTGT+TGG 0.526190 3:+74290651 None:intergenic
TACGAGGTGGAAACAAATAG+TGG 0.546964 3:-74288751 MsG0380015727.01.T01:CDS
ATTGGTTGAGTTGGGAGTGA+GGG 0.547467 3:+74290632 None:intergenic
TACAAAGGCGATGGCTGCAT+TGG 0.548314 3:+74290328 None:intergenic
CCTTACAATTGCTAAGGACA+AGG 0.552243 3:-74288698 MsG0380015727.01.T01:CDS
CATTGGTTGAGTTGGGAGTG+AGG 0.556852 3:+74290631 None:intergenic
AGAAATGGTGGGGTTTGGAA+GGG 0.558119 3:-74292856 MsG0380015727.01.T01:CDS
TGTCTTCCTTACAATTGCTA+AGG 0.563853 3:-74288704 MsG0380015727.01.T01:CDS
CCACATGTCAAGCTTTGCAG+GGG 0.564441 3:-74289538 MsG0380015727.01.T01:CDS
GTTGTAGAAGGAAGAAGAGG+AGG 0.565102 3:-74292892 MsG0380015727.01.T01:CDS
TGGAAGGGTATTTATAGGGA+GGG 0.568874 3:-74292841 MsG0380015727.01.T01:CDS
CGCGTTAGTGTCATGGCCGG+TGG 0.569380 3:+74292721 None:intergenic
CTCACTCCCAACTCAACCAA+TGG 0.571231 3:-74290630 MsG0380015727.01.T01:CDS
GACCGCGTTAGTGTCATGGC+CGG 0.575580 3:+74292718 None:intergenic
GATAGCTGAGAAAGAGAACA+AGG 0.575893 3:-74288781 MsG0380015727.01.T01:CDS
TGTAATAGGAGACTCGAGAG+AGG 0.587137 3:-74289494 MsG0380015727.01.T01:CDS
AAAGAAATGGTAACGTCCAA+CGG 0.587929 3:-74290377 MsG0380015727.01.T01:CDS
GGGTATTTATAGGGAGGGGT+GGG 0.591138 3:-74292836 MsG0380015727.01.T01:CDS
ACGAGGTGGAAACAAATAGT+GGG 0.591901 3:-74288750 MsG0380015727.01.T01:CDS
TAATTTCACTATTACTGACC+TGG 0.592207 3:+74290289 None:intergenic
CCCCTGCAAAGCTTGACATG+TGG 0.598401 3:+74289538 None:intergenic
TGTTTCGCATACCTGCAAAG+AGG 0.600432 3:+74289392 None:intergenic
ATGGTTGTAGAAGGAAGAAG+AGG 0.601263 3:-74292895 MsG0380015727.01.T01:CDS
TTGTAAGGAAGACATGGCTA+TGG 0.601532 3:+74288713 None:intergenic
GCTGAGAAAGAGAACAAGGA+AGG 0.604375 3:-74288777 MsG0380015727.01.T01:CDS
CAACGTGGCATCATATGATG+TGG 0.607548 3:-74289591 MsG0380015727.01.T01:CDS
AATTCGGAATACTAGAGTAG+AGG 0.608608 3:-74288664 MsG0380015727.01.T01:CDS
CTCGAGTCTCCTATTACATG+TGG 0.612075 3:+74289499 None:intergenic
GGAGACTCGAGAGAGGGTGT+AGG 0.617740 3:-74289487 MsG0380015727.01.T01:CDS
AGGATGATGTGAGAAATGGT+GGG 0.617856 3:-74292867 MsG0380015727.01.T01:CDS
TATCTATGAAAGACCAACGA+TGG 0.624388 3:-74292924 None:intergenic
GGGAGAAACAGAGAAGCCAT+TGG 0.624579 3:+74290614 None:intergenic
GGAAAGGGTACTATGCCACT+AGG 0.629547 3:+74290540 None:intergenic
ATTTATATCCATACTCCTAG+TGG 0.630760 3:-74290555 MsG0380015727.01.T01:CDS
CATATGATGTGGAGATTACG+GGG 0.632166 3:-74289580 MsG0380015727.01.T01:CDS
TAGCAATTGTAAGGAAGACA+TGG 0.634002 3:+74288707 None:intergenic
GTAGGTGTTGTAAGTCTATG+TGG 0.636359 3:-74289469 MsG0380015727.01.T01:CDS
AGTGTAGATGAAATGTACAA+AGG 0.647924 3:+74290313 None:intergenic
GGATGATGTGAGAAATGGTG+GGG 0.653380 3:-74292866 MsG0380015727.01.T01:CDS
GCTAAGGACAAGGAGAGATG+AGG 0.655281 3:-74288688 MsG0380015727.01.T01:CDS
AAAATAGAAGAGTACCAGAA+CGG 0.658371 3:+74290506 None:intergenic
ACAAGGAAGGTGATACGAGG+TGG 0.662953 3:-74288764 MsG0380015727.01.T01:CDS
CATGTGGAGAATTTAGTACA+CGG 0.664071 3:+74289554 None:intergenic
CACATCATATGATGCCACGT+TGG 0.666948 3:+74289592 None:intergenic
GATGAAATGTACAAAGGCGA+TGG 0.667885 3:+74290319 None:intergenic
GTAATAGGAGACTCGAGAGA+GGG 0.668774 3:-74289493 MsG0380015727.01.T01:CDS
TACAGAAGGTTGCACCAACG+TGG 0.692512 3:-74289606 MsG0380015727.01.T01:intron
CGAGGTGGAAACAAATAGTG+GGG 0.698764 3:-74288749 MsG0380015727.01.T01:CDS
AGTGTTGGAAATGAGCGACA+TGG 0.700630 3:+74290666 None:intergenic
AGACCAACGATGGAAAACCA+TGG 0.719274 3:-74292914 MsG0380015727.01.T01:CDS
CACCGGCCATGACACTAACG+CGG 0.719569 3:-74292720 MsG0380015727.01.T01:intron
AGAACAAGGAAGGTGATACG+AGG 0.743284 3:-74288767 MsG0380015727.01.T01:CDS
ATGATGTGGAGATTACGGGG+AGG 0.765492 3:-74289577 MsG0380015727.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATATATTTCTTTAATAAGT+TGG - Chr3:74291781-74291800 MsG0380015727.01.T01:intron 10.0%
!!! AAGTAATATTAATAATTTGT+TGG - Chr3:74290407-74290426 MsG0380015727.01.T01:intron 10.0%
!!! AATTGAATTAACAAATTTTT+TGG - Chr3:74291276-74291295 MsG0380015727.01.T01:intron 10.0%
!!! ACATTTTTCATATAAAAAAA+AGG - Chr3:74292169-74292188 MsG0380015727.01.T01:intron 10.0%
!! ATGAAAAAAAGTCAAAAAAA+CGG + Chr3:74290375-74290394 None:intergenic 15.0%
!! TAAAAGCAACTATTTATAAA+TGG + Chr3:74290819-74290838 None:intergenic 15.0%
!!! AAATGTTTTTAGTTTTTTAG+GGG - Chr3:74289332-74289351 MsG0380015727.01.T01:intron 15.0%
!!! CAAATGTTTTTAGTTTTTTA+GGG - Chr3:74289331-74289350 MsG0380015727.01.T01:intron 15.0%
!!! GTTATTAATCGTTATTATTT+TGG - Chr3:74292273-74292292 MsG0380015727.01.T01:intron 15.0%
!!! TCAAATGTTTTTAGTTTTTT+AGG - Chr3:74289330-74289349 MsG0380015727.01.T01:intron 15.0%
!! AATCTCTCTTATTCTTTATA+TGG - Chr3:74290171-74290190 MsG0380015727.01.T01:intron 20.0%
!! ATATAGTGATTGAAAATGAA+CGG + Chr3:74291043-74291062 None:intergenic 20.0%
!! ATCATTAATTTCACATCATA+CGG - Chr3:74290643-74290662 MsG0380015727.01.T01:CDS 20.0%
!! GGTTAATAAAGCTATATTTA+CGG - Chr3:74292685-74292704 MsG0380015727.01.T01:intron 20.0%
!! TGAAAAAAAGTCAAAAAAAC+GGG + Chr3:74290374-74290393 None:intergenic 20.0%
!!! AAACGTTTTTAGTTTTTTAG+GGG - Chr3:74289121-74289140 MsG0380015727.01.T01:intron 20.0%
!!! AACTATTAGTTTAATGCTAT+AGG + Chr3:74289673-74289692 None:intergenic 20.0%
!!! AACTGAAAGTATTCAAATAT+TGG - Chr3:74290218-74290237 MsG0380015727.01.T01:intron 20.0%
!!! ACTGAAAGTATTCAAATATT+GGG - Chr3:74290219-74290238 MsG0380015727.01.T01:intron 20.0%
!!! ATATTCATATCGTTTTTGTT+CGG - Chr3:74289262-74289281 MsG0380015727.01.T01:intron 20.0%
!!! ATGGATATAAATGTAAGTTT+TGG + Chr3:74290949-74290968 None:intergenic 20.0%
!!! CAAACGTTTTTAGTTTTTTA+GGG - Chr3:74289120-74289139 MsG0380015727.01.T01:intron 20.0%
!!! GTATTTTTGAAATTTTTGCA+GGG - Chr3:74289551-74289570 MsG0380015727.01.T01:CDS 20.0%
!!! TAGTTACTAGTTTTCATTTA+GGG - Chr3:74292657-74292676 MsG0380015727.01.T01:intron 20.0%
!!! TCAAACGTTTTTAGTTTTTT+AGG - Chr3:74289119-74289138 MsG0380015727.01.T01:intron 20.0%
!!! TGGATATAAATGTAAGTTTT+GGG + Chr3:74290948-74290967 None:intergenic 20.0%
! AAAAAAATTTGACGCCTAAA+AGG + Chr3:74290016-74290035 None:intergenic 25.0%
! AAAAAATTTGACGCCTAAAA+GGG + Chr3:74290015-74290034 None:intergenic 25.0%
! AAAAATTTCAAAAATACCCC+TGG + Chr3:74289548-74289567 None:intergenic 25.0%
! AAACAAATAATAACTACAGC+TGG - Chr3:74292194-74292213 MsG0380015727.01.T01:intron 25.0%
! ATAATTGAGTCCAATATTTC+AGG - Chr3:74289647-74289666 MsG0380015727.01.T01:intron 25.0%
! CCAAATATCAACTTATAACA+AGG - Chr3:74290090-74290109 MsG0380015727.01.T01:intron 25.0%
! CTTAAAATAAATTCTCTGAC+AGG - Chr3:74289856-74289875 MsG0380015727.01.T01:intron 25.0%
! TATAAATGGATGATGAAGTA+TGG + Chr3:74290805-74290824 None:intergenic 25.0%
! TGAAGAAAATTGAAGAAAAG+AGG + Chr3:74289313-74289332 None:intergenic 25.0%
! TGAAGAAAATTGAAGATAAG+AGG + Chr3:74289102-74289121 None:intergenic 25.0%
! TGACTAATTGAGGAATATAA+TGG - Chr3:74292368-74292387 MsG0380015727.01.T01:intron 25.0%
!! AACAATTGATTTAGATCAGA+TGG - Chr3:74290706-74290725 MsG0380015727.01.T01:intron 25.0%
!! ACTTGTTTAAGGCTATAAAT+AGG - Chr3:74289039-74289058 MsG0380015727.01.T01:intron 25.0%
!! GGATATAAATGTAAGTTTTG+GGG + Chr3:74290947-74290966 None:intergenic 25.0%
!! GGTCTAAATACATCAATTTT+CGG - Chr3:74291297-74291316 MsG0380015727.01.T01:intron 25.0%
!!! AGTTACCAATAATTTTGAAG+CGG - Chr3:74291628-74291647 MsG0380015727.01.T01:intron 25.0%
!!! CCTTGTTATAAGTTGATATT+TGG + Chr3:74290093-74290112 None:intergenic 25.0%
!!! CGACGACAATTATTTTAAAA+CGG - Chr3:74290504-74290523 MsG0380015727.01.T01:intron 25.0%
!!! CTGTCAGAGAATTTATTTTA+AGG + Chr3:74289858-74289877 None:intergenic 25.0%
!!! CTTTGAAATTAACCATCAAT+GGG - Chr3:74292437-74292456 MsG0380015727.01.T01:intron 25.0%
!!! GATATAAATGTAAGTTTTGG+GGG + Chr3:74290946-74290965 None:intergenic 25.0%
!!! GGTATTTTTGAAATTTTTGC+AGG - Chr3:74289550-74289569 MsG0380015727.01.T01:CDS 25.0%
!!! GTAGTTACTAGTTTTCATTT+AGG - Chr3:74292656-74292675 MsG0380015727.01.T01:intron 25.0%
!!! TAAAAGCTTGTTTTGTGTTA+AGG + Chr3:74289795-74289814 None:intergenic 25.0%
!!! TAGTTTTCATTTAGGGTATT+TGG - Chr3:74292664-74292683 MsG0380015727.01.T01:intron 25.0%
!!! TCCACTTTTACAAATCTTTT+GGG - Chr3:74290563-74290582 MsG0380015727.01.T01:CDS 25.0%
!!! TTACCATTTCTTTTAGAACT+GGG + Chr3:74291128-74291147 None:intergenic 25.0%
!!! TTCTTTAATAAGTTGGTGAT+CGG - Chr3:74291788-74291807 MsG0380015727.01.T01:intron 25.0%
!!! TTTGTTCGGATTTAATTTTC+CGG - Chr3:74289276-74289295 MsG0380015727.01.T01:intron 25.0%
AAAATAAAACCCGAAACCAA+AGG + Chr3:74288843-74288862 None:intergenic 30.0%
AACACTTTACCACATGTAAT+AGG - Chr3:74292004-74292023 MsG0380015727.01.T01:intron 30.0%
AACGGTAACGTTAAAATATG+TGG - Chr3:74291153-74291172 MsG0380015727.01.T01:intron 30.0%
AAGTAACTAACAATCTGGTT+CGG - Chr3:74289507-74289526 MsG0380015727.01.T01:CDS 30.0%
AAGTAGCAATTGACTAATTG+AGG - Chr3:74292358-74292377 MsG0380015727.01.T01:intron 30.0%
ACACACTTTAAGTAGAGATT+TGG + Chr3:74291602-74291621 None:intergenic 30.0%
ACTTATAACAAGGATCACAT+CGG - Chr3:74290100-74290119 MsG0380015727.01.T01:intron 30.0%
AGAAGAGAGGAAATAAACAT+AGG - Chr3:74291824-74291843 MsG0380015727.01.T01:intron 30.0%
AGCCTGAATTTAAAAATGTC+AGG - Chr3:74289832-74289851 MsG0380015727.01.T01:intron 30.0%
AGGGAGGATATGAAAAATTA+TGG - Chr3:74291443-74291462 MsG0380015727.01.T01:intron 30.0%
AGTGTAGATGAAATGTACAA+AGG + Chr3:74291202-74291221 None:intergenic 30.0%
ATAAATGCAGTCAAAAAACG+TGG - Chr3:74288719-74288738 MsG0380015727.01.T01:CDS 30.0%
ATAGTCCCAATCAATTCTTA+GGG + Chr3:74291412-74291431 None:intergenic 30.0%
ATCATATGATGTGGAGATTA+CGG - Chr3:74291930-74291949 MsG0380015727.01.T01:intron 30.0%
ATGCATTTGAGAATCAAGTT+TGG - Chr3:74290734-74290753 MsG0380015727.01.T01:intron 30.0%
ATTGACTGTATTAATGACCT+AGG - Chr3:74289016-74289035 MsG0380015727.01.T01:intron 30.0%
ATTGGACTCAATTATCCAAT+GGG + Chr3:74289642-74289661 None:intergenic 30.0%
ATTTATATCCATACTCCTAG+TGG - Chr3:74290957-74290976 MsG0380015727.01.T01:intron 30.0%
CACTTGACAAAAAAAGACAA+TGG - Chr3:74291383-74291402 MsG0380015727.01.T01:intron 30.0%
GAAGAGAGGAAATAAACATA+GGG - Chr3:74291825-74291844 MsG0380015727.01.T01:intron 30.0%
GACTAACTCACTAAAATGTT+TGG + Chr3:74292609-74292628 None:intergenic 30.0%
GGTACATAAAGAAAAACAGA+GGG + Chr3:74290353-74290372 None:intergenic 30.0%
TAATTTCACTATTACTGACC+TGG + Chr3:74291226-74291245 None:intergenic 30.0%
TATATTTACGGAAATGTGAC+AGG - Chr3:74292697-74292716 MsG0380015727.01.T01:intron 30.0%
TATTGGACTCAATTATCCAA+TGG + Chr3:74289643-74289662 None:intergenic 30.0%
TCCCAAAAGATTTGTAAAAG+TGG + Chr3:74290567-74290586 None:intergenic 30.0%
TGCATTTGAGAATCAAGTTT+GGG - Chr3:74290735-74290754 MsG0380015727.01.T01:intron 30.0%
TGTATTTATCGTAATCACGA+TGG + Chr3:74290060-74290079 None:intergenic 30.0%
TTGTATGATATACCCATTGA+TGG + Chr3:74292452-74292471 None:intergenic 30.0%
! CAAATGCAATTGCATGTTTT+CGG - Chr3:74292910-74292929 MsG0380015727.01.T01:CDS 30.0%
! CCATTGATGGTTAATTTCAA+AGG + Chr3:74292439-74292458 None:intergenic 30.0%
! TATTTTGTTCGTTCCCTTTT+AGG - Chr3:74289999-74290018 MsG0380015727.01.T01:intron 30.0%
! TGGCATATTTTACATTCGTT+GGG - Chr3:74292499-74292518 MsG0380015727.01.T01:intron 30.0%
!! AAAATAGAAGAGTACCAGAA+CGG + Chr3:74291009-74291028 None:intergenic 30.0%
!! ACATTCTGGAATGTATAATC+CGG - Chr3:74288925-74288944 MsG0380015727.01.T01:intron 30.0%
!! CCTTTGAAATTAACCATCAA+TGG - Chr3:74292436-74292455 MsG0380015727.01.T01:intron 30.0%
!! CGTTCTAAAATTGATCTCAA+AGG - Chr3:74291092-74291111 MsG0380015727.01.T01:intron 30.0%
!! GTCCACTTTTACAAATCTTT+TGG - Chr3:74290562-74290581 MsG0380015727.01.T01:CDS 30.0%
!! TCTTTAATAAGTTGGTGATC+GGG - Chr3:74291789-74291808 MsG0380015727.01.T01:intron 30.0%
!!! ACATATTTTAACGTTACCGT+TGG + Chr3:74291154-74291173 None:intergenic 30.0%
!!! ACGTTTTTTGACTGCATTTA+TGG + Chr3:74288720-74288739 None:intergenic 30.0%
!!! ATTGATCCATTAGCCTTTTA+GGG - Chr3:74289745-74289764 MsG0380015727.01.T01:intron 30.0%
!!! CATTGTCTTTTTTTGTCAAG+TGG + Chr3:74291385-74291404 None:intergenic 30.0%
!!! GTTACCATTTCTTTTAGAAC+TGG + Chr3:74291129-74291148 None:intergenic 30.0%
!!! TACCATTTCTTTTAGAACTG+GGG + Chr3:74291127-74291146 None:intergenic 30.0%
!!! TATTGATCCATTAGCCTTTT+AGG - Chr3:74289744-74289763 MsG0380015727.01.T01:intron 30.0%
!!! TTTTAGTTTTTTAGGGGTGT+CGG - Chr3:74289127-74289146 MsG0380015727.01.T01:intron 30.0%
AAAAGAGGTGAAGAGATTTC+CGG + Chr3:74289298-74289317 None:intergenic 35.0%
AAAAGTTGGCACTTCTTTGT+AGG - Chr3:74288895-74288914 MsG0380015727.01.T01:intron 35.0%
AAAGTTGGCACTTCTTTGTA+GGG - Chr3:74288896-74288915 MsG0380015727.01.T01:intron 35.0%
AAGTGAAGCTGTACAATGTT+TGG - Chr3:74291873-74291892 MsG0380015727.01.T01:intron 35.0%
AATAGCATTTCAGCTTGTGT+GGG - Chr3:74289190-74289209 MsG0380015727.01.T01:intron 35.0%
AATGCACCTTTGCTTTAGTT+TGG + Chr3:74291507-74291526 None:intergenic 35.0%
AATTCGGAATACTAGAGTAG+AGG - Chr3:74292848-74292867 MsG0380015727.01.T01:CDS 35.0%
ACAAAGTGACAAAACCAACA+CGG - Chr3:74292525-74292544 MsG0380015727.01.T01:intron 35.0%
ACACCATAATCGCATTAATC+CGG + Chr3:74288866-74288885 None:intergenic 35.0%
ACCAGATTGTTAGTTACTTC+CGG + Chr3:74289506-74289525 None:intergenic 35.0%
AGTCAAGAGAGTCTTCTAAT+TGG - Chr3:74292883-74292902 MsG0380015727.01.T01:CDS 35.0%
AGTCAATGAAAACGTGTTAG+TGG + Chr3:74289003-74289022 None:intergenic 35.0%
ATAAGAGGTGAAGTGAAGAA+TGG + Chr3:74289087-74289106 None:intergenic 35.0%
ATAATGTATACGTACCGTGT+TGG + Chr3:74292542-74292561 None:intergenic 35.0%
ATGCTATAGGCCTGAAATAT+TGG + Chr3:74289660-74289679 None:intergenic 35.0%
ATTCTCGTTCTTTGTTGAGA+CGG + Chr3:74291714-74291733 None:intergenic 35.0%
CACGGTACGTATACATTATA+TGG - Chr3:74292543-74292562 MsG0380015727.01.T01:intron 35.0%
CAGTGTGTATGAATGTGAAT+AGG + Chr3:74289955-74289974 None:intergenic 35.0%
CATAGTCCCAATCAATTCTT+AGG + Chr3:74291413-74291432 None:intergenic 35.0%
CATCGGGAATGAAATTACAT+AGG - Chr3:74290117-74290136 MsG0380015727.01.T01:intron 35.0%
CATGTGGAGAATTTAGTACA+CGG + Chr3:74291961-74291980 None:intergenic 35.0%
CCTTAACTATCTATAAGCGA+GGG - Chr3:74290440-74290459 MsG0380015727.01.T01:intron 35.0%
CTTATAACAAGGATCACATC+GGG - Chr3:74290101-74290120 MsG0380015727.01.T01:intron 35.0%
CTTCACCGCTTCAAAATTAT+TGG + Chr3:74291636-74291655 None:intergenic 35.0%
GGGTACATAAAGAAAAACAG+AGG + Chr3:74290354-74290373 None:intergenic 35.0%
GTGTCTTTCTTTGATGTCAA+GGG + Chr3:74289239-74289258 None:intergenic 35.0%
TACATTTCATCTACACTTCC+AGG - Chr3:74291205-74291224 MsG0380015727.01.T01:intron 35.0%
TAGCAATTGTAAGGAAGACA+TGG + Chr3:74292808-74292827 None:intergenic 35.0%
TATTGCAGGGTTCATATGAA+TGG + Chr3:74289384-74289403 None:intergenic 35.0%
TATTGCATAAACATGACCCT+TGG - Chr3:74291675-74291694 MsG0380015727.01.T01:intron 35.0%
TCATATGATGTGGAGATTAC+GGG - Chr3:74291931-74291950 MsG0380015727.01.T01:intron 35.0%
TCCTTAACTATCTATAAGCG+AGG - Chr3:74290439-74290458 MsG0380015727.01.T01:intron 35.0%
TCTCAACAAAGAACGAGAAT+CGG - Chr3:74291714-74291733 MsG0380015727.01.T01:intron 35.0%
TGTCTTCCTTACAATTGCTA+AGG - Chr3:74292808-74292827 MsG0380015727.01.T01:CDS 35.0%
TGTGTCTTTCTTTGATGTCA+AGG + Chr3:74289240-74289259 None:intergenic 35.0%
TTGAAAGAGAGCCATTAATG+TGG - Chr3:74288963-74288982 MsG0380015727.01.T01:intron 35.0%
TTGGAGCATATATGTACAGA+AGG - Chr3:74291892-74291911 MsG0380015727.01.T01:intron 35.0%
TTTCCGGATTAATGCGATTA+TGG - Chr3:74288860-74288879 MsG0380015727.01.T01:intron 35.0%
! AAAGAAATGGTAACGTCCAA+CGG - Chr3:74291135-74291154 MsG0380015727.01.T01:intron 35.0%
! AATGACCTAGGACTTGTTTA+AGG - Chr3:74289028-74289047 MsG0380015727.01.T01:intron 35.0%
! AGAATCAAGTTTGGGACAAA+TGG - Chr3:74290743-74290762 MsG0380015727.01.T01:intron 35.0%
! ATGCACCTTTGCTTTAGTTT+GGG + Chr3:74291506-74291525 None:intergenic 35.0%
! GAATTCCGGATTGTATTTTC+CGG + Chr3:74288819-74288838 None:intergenic 35.0%
! GGCCTGACATTTTTAAATTC+AGG + Chr3:74289837-74289856 None:intergenic 35.0%
! GTGGCATATTTTACATTCGT+TGG - Chr3:74292498-74292517 MsG0380015727.01.T01:intron 35.0%
! TATAGCCTTAAACAAGTCCT+AGG + Chr3:74289036-74289055 None:intergenic 35.0%
! TTTTAACCAAGATGCATGCA+AGG - Chr3:74292095-74292114 MsG0380015727.01.T01:intron 35.0%
! TTTTTGTCAAGTGGATGAGT+GGG + Chr3:74291376-74291395 None:intergenic 35.0%
!! ATGGAGGTATTTGTTGAAGA+TGG + Chr3:74289068-74289087 None:intergenic 35.0%
!! GGTTTGGAAGGGTATTTATA+GGG - Chr3:74288667-74288686 MsG0380015727.01.T01:CDS 35.0%
!! TCAAAAGTGCTGAATCATTC+CGG + Chr3:74288947-74288966 None:intergenic 35.0%
!!! CAATAATTTTGAAGCGGTGA+AGG - Chr3:74291634-74291653 MsG0380015727.01.T01:intron 35.0%
!!! CTGGTCTGGATTTTATTTTC+CGG - Chr3:74289484-74289503 MsG0380015727.01.T01:CDS 35.0%
!!! TGGTTTCGGGTTTTATTTTC+CGG - Chr3:74288844-74288863 MsG0380015727.01.T01:intron 35.0%
!!! TTGATCCATTAGCCTTTTAG+GGG - Chr3:74289746-74289765 MsG0380015727.01.T01:intron 35.0%
!!! TTTTTTGTCAAGTGGATGAG+TGG + Chr3:74291377-74291396 None:intergenic 35.0%
AATGCTATTGCAGGGTTCAT+AGG + Chr3:74289179-74289198 None:intergenic 40.0%
ACAAGCTGAAATGCTATTGC+AGG + Chr3:74289188-74289207 None:intergenic 40.0%
ACACTAAACCTACCCCTAAA+AGG + Chr3:74289761-74289780 None:intergenic 40.0%
ACGAGGTGGAAACAAATAGT+GGG - Chr3:74292762-74292781 MsG0380015727.01.T01:CDS 40.0%
AGAATTGATTGGGACTATGC+AGG - Chr3:74291414-74291433 MsG0380015727.01.T01:intron 40.0%
AGAGAGCCATTAATGTGGTT+TGG - Chr3:74288968-74288987 MsG0380015727.01.T01:intron 40.0%
AGCTTGTGGGGTTCATATAA+CGG - Chr3:74289411-74289430 MsG0380015727.01.T01:CDS 40.0%
AGGATGATGTGAGAAATGGT+GGG - Chr3:74288645-74288664 MsG0380015727.01.T01:CDS 40.0%
ATAGCATTTCAGCTTGTGTG+GGG - Chr3:74289191-74289210 MsG0380015727.01.T01:intron 40.0%
ATGATGAAGTATGGAACACG+TGG + Chr3:74290796-74290815 None:intergenic 40.0%
ATGGTTGTAGAAGGAAGAAG+AGG - Chr3:74288617-74288636 MsG0380015727.01.T01:CDS 40.0%
CAAGAGAGTCTTCTAATTGG+TGG - Chr3:74292886-74292905 MsG0380015727.01.T01:CDS 40.0%
CAAGCTGAAATGCTATTGCA+GGG + Chr3:74289187-74289206 None:intergenic 40.0%
CAAGGAGAGATGAGGTAATT+CGG - Chr3:74292832-74292851 MsG0380015727.01.T01:CDS 40.0%
CAATAGCATTTCAGCTTGTG+GGG - Chr3:74289189-74289208 MsG0380015727.01.T01:intron 40.0%
CAATAGCATTTCAGCTTGTG+TGG - Chr3:74289189-74289208 MsG0380015727.01.T01:intron 40.0%
CAATGCCCAAACTAAAGCAA+AGG - Chr3:74291498-74291517 MsG0380015727.01.T01:intron 40.0%
CAATGGGTCGTCAAATATCA+AGG + Chr3:74289626-74289645 None:intergenic 40.0%
CACGATGACATTTCAAACCA+TGG + Chr3:74290261-74290280 None:intergenic 40.0%
CATATGATGTGGAGATTACG+GGG - Chr3:74291932-74291951 MsG0380015727.01.T01:intron 40.0%
CATGTAGCTAACTACTAACG+TGG - Chr3:74292479-74292498 MsG0380015727.01.T01:intron 40.0%
CCCTCGCTTATAGATAGTTA+AGG + Chr3:74290443-74290462 None:intergenic 40.0%
CCTTACAATTGCTAAGGACA+AGG - Chr3:74292814-74292833 MsG0380015727.01.T01:CDS 40.0%
CCTTGTCCTTAGCAATTGTA+AGG + Chr3:74292817-74292836 None:intergenic 40.0%
CTTGATATTTGACGACCCAT+TGG - Chr3:74289624-74289643 MsG0380015727.01.T01:intron 40.0%
CTTGATCCAATTCATGACCA+CGG - Chr3:74291532-74291551 MsG0380015727.01.T01:intron 40.0%
CTTGTGTGGGGTTCATATAA+CGG - Chr3:74289203-74289222 MsG0380015727.01.T01:intron 40.0%
GAAAATGAACGGAGACATGA+AGG + Chr3:74291032-74291051 None:intergenic 40.0%
GAATACTAGAGTAGAGGAAG+AGG - Chr3:74292854-74292873 MsG0380015727.01.T01:CDS 40.0%
GAATGTGAATAGGTTGTGTC+AGG + Chr3:74289945-74289964 None:intergenic 40.0%
GAGAGGAAATAAACATAGGG+AGG - Chr3:74291828-74291847 MsG0380015727.01.T01:intron 40.0%
GATAGCTGAGAAAGAGAACA+AGG - Chr3:74292731-74292750 MsG0380015727.01.T01:CDS 40.0%
GATGAAATGTACAAAGGCGA+TGG + Chr3:74291196-74291215 None:intergenic 40.0%
GCAATAGCATTTCAGCTTGT+GGG - Chr3:74289188-74289207 MsG0380015727.01.T01:intron 40.0%
GGTGACCCTAAGAATTGATT+GGG - Chr3:74291404-74291423 MsG0380015727.01.T01:intron 40.0%
TACAATCCGGAATTCACCTT+TGG - Chr3:74288824-74288843 MsG0380015727.01.T01:intron 40.0%
TACCGTCCAAACCACATTAA+TGG + Chr3:74288977-74288996 None:intergenic 40.0%
TACGAGGTGGAAACAAATAG+TGG - Chr3:74292761-74292780 MsG0380015727.01.T01:CDS 40.0%
TATTGCAGGGTTCATAGGAA+CGG + Chr3:74289174-74289193 None:intergenic 40.0%
TCCGGAAGTAACTAACAATC+TGG - Chr3:74289502-74289521 MsG0380015727.01.T01:CDS 40.0%
TCTTCTTCCTTCTACAACCA+TGG + Chr3:74288618-74288637 None:intergenic 40.0%
TGAATAGGTTGTGTCAGGTA+AGG + Chr3:74289940-74289959 None:intergenic 40.0%
TGCAATAGCATTTCAGCTTG+TGG - Chr3:74289187-74289206 MsG0380015727.01.T01:intron 40.0%
TGGAAAACCATGGTTGTAGA+AGG - Chr3:74288608-74288627 MsG0380015727.01.T01:CDS 40.0%
TGGTGACCCTAAGAATTGAT+TGG - Chr3:74291403-74291422 MsG0380015727.01.T01:intron 40.0%
TTGATCCAATTCATGACCAC+GGG - Chr3:74291533-74291552 MsG0380015727.01.T01:intron 40.0%
TTGTAAGGAAGACATGGCTA+TGG + Chr3:74292802-74292821 None:intergenic 40.0%
TTTCAAAAATACCCCTGGTC+CGG + Chr3:74289543-74289562 None:intergenic 40.0%
! ACAAAAAAGCGCACAACATC+TGG - Chr3:74289465-74289484 MsG0380015727.01.T01:CDS 40.0%
! AGCCATTAATGTGGTTTGGA+CGG - Chr3:74288972-74288991 MsG0380015727.01.T01:intron 40.0%
! CTAAGACACGTTTTGTATGC+AGG + Chr3:74290325-74290344 None:intergenic 40.0%
! GTAGGTGTTGTAAGTCTATG+TGG - Chr3:74292043-74292062 MsG0380015727.01.T01:intron 40.0%
!! CTGGTTCGGAAAACATAATC+CGG - Chr3:74289521-74289540 MsG0380015727.01.T01:CDS 40.0%
!! GGGTTTGGAAGGGTATTTAT+AGG - Chr3:74288666-74288685 MsG0380015727.01.T01:CDS 40.0%
!! GTCCCCAGTTCTAAAAGAAA+TGG - Chr3:74291122-74291141 MsG0380015727.01.T01:intron 40.0%
!! TGGAAGGGTATTTATAGGGA+GGG - Chr3:74288671-74288690 MsG0380015727.01.T01:CDS 40.0%
!! TTGGAAGGGTATTTATAGGG+AGG - Chr3:74288670-74288689 MsG0380015727.01.T01:CDS 40.0%
!!! TGTAAGTTTTGGGGGAAAAG+CGG + Chr3:74290938-74290957 None:intergenic 40.0%
ACCTACCCCTAAAAGGCTAA+TGG + Chr3:74289754-74289773 None:intergenic 45.0%
AGAACAAGGAAGGTGATACG+AGG - Chr3:74292745-74292764 MsG0380015727.01.T01:CDS 45.0%
AGACCAACGATGGAAAACCA+TGG - Chr3:74288598-74288617 MsG0380015727.01.T01:CDS 45.0%
AGAGGTGAAGTGAAGAATGG+AGG + Chr3:74289084-74289103 None:intergenic 45.0%
ATGCGATTATGGTGTGAACG+AGG - Chr3:74288871-74288890 MsG0380015727.01.T01:intron 45.0%
CAACGTGGCATCATATGATG+TGG - Chr3:74291921-74291940 MsG0380015727.01.T01:intron 45.0%
CACATCATATGATGCCACGT+TGG + Chr3:74291923-74291942 None:intergenic 45.0%
CCGAAACCAAAGGTGAATTC+CGG + Chr3:74288833-74288852 None:intergenic 45.0%
CGAGGTGGAAACAAATAGTG+GGG - Chr3:74292763-74292782 MsG0380015727.01.T01:CDS 45.0%
CTCGAGTCTCCTATTACATG+TGG + Chr3:74292016-74292035 None:intergenic 45.0%
GAAAACATAATCCGGACCAG+GGG - Chr3:74289529-74289548 MsG0380015727.01.T01:CDS 45.0%
GAGGATGATGTGAGAAATGG+TGG - Chr3:74288644-74288663 MsG0380015727.01.T01:CDS 45.0%
GCTGAGAAAGAGAACAAGGA+AGG - Chr3:74292735-74292754 MsG0380015727.01.T01:CDS 45.0%
GGAAAACATAATCCGGACCA+GGG - Chr3:74289528-74289547 MsG0380015727.01.T01:CDS 45.0%
GGAGAGGATGATGTGAGAAA+TGG - Chr3:74288641-74288660 MsG0380015727.01.T01:CDS 45.0%
GGATGATGTGAGAAATGGTG+GGG - Chr3:74288646-74288665 MsG0380015727.01.T01:CDS 45.0%
GTAATAGGAGACTCGAGAGA+GGG - Chr3:74292019-74292038 MsG0380015727.01.T01:intron 45.0%
GTACTATGCCACTAGGAGTA+TGG + Chr3:74290968-74290987 None:intergenic 45.0%
GTGAAACAGAGGAAGAAGAG+AGG - Chr3:74291811-74291830 MsG0380015727.01.T01:intron 45.0%
GTTGTAGAAGGAAGAAGAGG+AGG - Chr3:74288620-74288639 MsG0380015727.01.T01:CDS 45.0%
TCCACATGTCAAGCTTTGCA+GGG - Chr3:74291973-74291992 MsG0380015727.01.T01:intron 45.0%
TGACCACTGTCAAAAACGTG+TGG - Chr3:74288762-74288781 MsG0380015727.01.T01:CDS 45.0%
TGATCCAATTCATGACCACG+GGG - Chr3:74291534-74291553 MsG0380015727.01.T01:intron 45.0%
TGCGATTATGGTGTGAACGA+GGG - Chr3:74288872-74288891 MsG0380015727.01.T01:intron 45.0%
TGTAATAGGAGACTCGAGAG+AGG - Chr3:74292018-74292037 MsG0380015727.01.T01:intron 45.0%
TGTTTCGCATACCTGCAAAG+AGG + Chr3:74292123-74292142 None:intergenic 45.0%
TTGTAGGGCTAAGGACATTC+TGG - Chr3:74288911-74288930 MsG0380015727.01.T01:intron 45.0%
! AGAAATGGTGGGGTTTGGAA+GGG - Chr3:74288656-74288675 MsG0380015727.01.T01:CDS 45.0%
! AGAGAAGCCATTGGTTGAGT+TGG + Chr3:74290892-74290911 None:intergenic 45.0%
! AGTGTTGGAAATGAGCGACA+TGG + Chr3:74290849-74290868 None:intergenic 45.0%
! ATGTGAGAAATGGTGGGGTT+TGG - Chr3:74288651-74288670 MsG0380015727.01.T01:CDS 45.0%
! CAACCATGGTTTTCCATCGT+TGG + Chr3:74288604-74288623 None:intergenic 45.0%
! CCGGAATTCACCTTTGGTTT+CGG - Chr3:74288830-74288849 MsG0380015727.01.T01:intron 45.0%
! CGGAATTCACCTTTGGTTTC+GGG - Chr3:74288831-74288850 MsG0380015727.01.T01:intron 45.0%
! GAGAAGCCATTGGTTGAGTT+GGG + Chr3:74290891-74290910 None:intergenic 45.0%
!! ATTGGTTGAGTTGGGAGTGA+GGG + Chr3:74290883-74290902 None:intergenic 45.0%
!! GGAAGGGTATTTATAGGGAG+GGG - Chr3:74288672-74288691 MsG0380015727.01.T01:CDS 45.0%
!!! GTAAGTTTTGGGGGAAAAGC+GGG + Chr3:74290937-74290956 None:intergenic 45.0%
!!! TAGTTTTTTAGGGGTGTCGG+TGG - Chr3:74289130-74289149 MsG0380015727.01.T01:intron 45.0%
!!! TCCATTAGCCTTTTAGGGGT+AGG - Chr3:74289750-74289769 MsG0380015727.01.T01:intron 45.0%
AAAGCGCACAACATCTGGTC+TGG - Chr3:74289470-74289489 MsG0380015727.01.T01:CDS 50.0%
AAGCGGTGAAGGAAACAGAG+GGG - Chr3:74291645-74291664 MsG0380015727.01.T01:intron 50.0%
ACAAGGAAGGTGATACGAGG+TGG - Chr3:74292748-74292767 MsG0380015727.01.T01:CDS 50.0%
ACGGATGATGTTACGAGCCA+AGG + Chr3:74291695-74291714 None:intergenic 50.0%
AGAAGGAAGAAGAGGAGGAG+AGG - Chr3:74288625-74288644 MsG0380015727.01.T01:CDS 50.0%
AGGGGTGGGTGAAAAATGGT+TGG - Chr3:74288690-74288709 MsG0380015727.01.T01:CDS 50.0%
ATGATGTGGAGATTACGGGG+AGG - Chr3:74291935-74291954 MsG0380015727.01.T01:intron 50.0%
ATTCATGACCACGGGGAATG+TGG - Chr3:74291541-74291560 MsG0380015727.01.T01:intron 50.0%
CACGATGGCTCAGTGTGATT+TGG + Chr3:74290045-74290064 None:intergenic 50.0%
CATGCAAGGTTCCTCTTTGC+AGG - Chr3:74292109-74292128 MsG0380015727.01.T01:intron 50.0%
CATTCCCCGTGGTCATGAAT+TGG + Chr3:74291541-74291560 None:intergenic 50.0%
CCACATGTCAAGCTTTGCAG+GGG - Chr3:74291974-74291993 MsG0380015727.01.T01:intron 50.0%
CGGAAAACATAATCCGGACC+AGG - Chr3:74289527-74289546 MsG0380015727.01.T01:CDS 50.0%
CGGATGATGTTACGAGCCAA+GGG + Chr3:74291694-74291713 None:intergenic 50.0%
CTCACTCCCAACTCAACCAA+TGG - Chr3:74290882-74290901 MsG0380015727.01.T01:intron 50.0%
CTCCACATGTCAAGCTTTGC+AGG - Chr3:74291972-74291991 MsG0380015727.01.T01:intron 50.0%
GAAGCGGTGAAGGAAACAGA+GGG - Chr3:74291644-74291663 MsG0380015727.01.T01:intron 50.0%
GAGGAACCTTGCATGCATCT+TGG + Chr3:74292104-74292123 None:intergenic 50.0%
GATGTAGCGCATGAGTACCA+TGG - Chr3:74290241-74290260 MsG0380015727.01.T01:intron 50.0%
GCGGTCCGGAAAATACAATC+CGG - Chr3:74288811-74288830 MsG0380015727.01.T01:intron 50.0%
GCTAAGGACAAGGAGAGATG+AGG - Chr3:74292824-74292843 MsG0380015727.01.T01:CDS 50.0%
GGCACTTCTTTGTAGGGCTA+AGG - Chr3:74288902-74288921 MsG0380015727.01.T01:intron 50.0%
GGGAGAAACAGAGAAGCCAT+TGG + Chr3:74290901-74290920 None:intergenic 50.0%
GGGGTGGGTGAAAAATGGTT+GGG - Chr3:74288691-74288710 MsG0380015727.01.T01:CDS 50.0%
GGGTATTTATAGGGAGGGGT+GGG - Chr3:74288676-74288695 MsG0380015727.01.T01:CDS 50.0%
GGTGTGAACGAGGGAAAAGT+TGG - Chr3:74288881-74288900 MsG0380015727.01.T01:intron 50.0%
TACAAAGGCGATGGCTGCAT+TGG + Chr3:74291187-74291206 None:intergenic 50.0%
TACAGAAGGTTGCACCAACG+TGG - Chr3:74291906-74291925 MsG0380015727.01.T01:intron 50.0%
TGAAGCGGTGAAGGAAACAG+AGG - Chr3:74291643-74291662 MsG0380015727.01.T01:intron 50.0%
! AGGGAAAGAGGTGTGAGTGT+TGG + Chr3:74290864-74290883 None:intergenic 50.0%
! AGGGTATTTATAGGGAGGGG+TGG - Chr3:74288675-74288694 MsG0380015727.01.T01:CDS 50.0%
! GAGAAATGGTGGGGTTTGGA+AGG - Chr3:74288655-74288674 MsG0380015727.01.T01:CDS 50.0%
! GCACCACACGTTTTTGACAG+TGG + Chr3:74288768-74288787 None:intergenic 50.0%
! TTGGTGATCGGGTGAAACAG+AGG - Chr3:74291800-74291819 MsG0380015727.01.T01:intron 50.0%
!! CATTGGTTGAGTTGGGAGTG+AGG + Chr3:74290884-74290903 None:intergenic 50.0%
!! GGAAAGGGTACTATGCCACT+AGG + Chr3:74290975-74290994 None:intergenic 50.0%
AAACGTGTGGTGCAGACCAC+CGG - Chr3:74288775-74288794 MsG0380015727.01.T01:CDS 55.0%
AACGGTTGCGTGCACTGGAA+AGG + Chr3:74290991-74291010 None:intergenic 55.0%
ACGGTTGCGTGCACTGGAAA+GGG + Chr3:74290990-74291009 None:intergenic 55.0%
AGGGAGGGGTGGGTGAAAAA+TGG - Chr3:74288686-74288705 MsG0380015727.01.T01:CDS 55.0%
CCCCTGCAAAGCTTGACATG+TGG + Chr3:74291977-74291996 None:intergenic 55.0%
GAGTTGGGAGTGAGGGAAAG+AGG + Chr3:74290876-74290895 None:intergenic 55.0%
! AAGGCGATGGCTGCATTGGT+TGG + Chr3:74291183-74291202 None:intergenic 55.0%
! AGACGTGCGAGAGTACGAGA+AGG + Chr3:74291475-74291494 None:intergenic 55.0%
!! TGTGGTGGACGTGTTGCACT+TGG - Chr3:74291559-74291578 MsG0380015727.01.T01:intron 55.0%
!! TTTTGGGGGAAAAGCGGGTG+GGG + Chr3:74290932-74290951 None:intergenic 55.0%
!!! AGTTTTGGGGGAAAAGCGGG+TGG + Chr3:74290934-74290953 None:intergenic 55.0%
!!! GTTTTGGGGGAAAAGCGGGT+GGG + Chr3:74290933-74290952 None:intergenic 55.0%
AAAGCGGGTGGGGGAGACAA+TGG + Chr3:74290922-74290941 None:intergenic 60.0%
AAGCGGGTGGGGGAGACAAT+GGG + Chr3:74290921-74290940 None:intergenic 60.0%
ACCAGAACGGTTGCGTGCAC+TGG + Chr3:74290996-74291015 None:intergenic 60.0%
ACTATGCAGGTGCAGCAGGG+AGG - Chr3:74291427-74291446 MsG0380015727.01.T01:intron 60.0%
CACCGGCCATGACACTAACG+CGG - Chr3:74288792-74288811 MsG0380015727.01.T01:CDS 60.0%
CATGACCACGGGGAATGTGG+TGG - Chr3:74291544-74291563 MsG0380015727.01.T01:intron 60.0%
CGGTGAAGGAAACAGAGGGG+TGG - Chr3:74291648-74291667 MsG0380015727.01.T01:intron 60.0%
GACCGCGTTAGTGTCATGGC+CGG + Chr3:74288797-74288816 None:intergenic 60.0%
GCCATGACACTAACGCGGTC+CGG - Chr3:74288797-74288816 MsG0380015727.01.T01:intron 60.0%
GGGACTATGCAGGTGCAGCA+GGG - Chr3:74291424-74291443 MsG0380015727.01.T01:intron 60.0%
TCCAGTGCACGCAACCGTTC+TGG - Chr3:74290992-74291011 MsG0380015727.01.T01:intron 60.0%
TCCGGACCGCGTTAGTGTCA+TGG + Chr3:74288801-74288820 None:intergenic 60.0%
TGGGACTATGCAGGTGCAGC+AGG - Chr3:74291423-74291442 MsG0380015727.01.T01:intron 60.0%
TTTGGGGGAAAAGCGGGTGG+GGG + Chr3:74290931-74290950 None:intergenic 60.0%
! GGAGACTCGAGAGAGGGTGT+AGG - Chr3:74292025-74292044 MsG0380015727.01.T01:intron 60.0%
! TTTTTGCAGGGCGCGCGAGA+AGG - Chr3:74289563-74289582 MsG0380015727.01.T01:CDS 60.0%
!! TAGGGGTGTCGGTGGTGTCA+TGG - Chr3:74289138-74289157 MsG0380015727.01.T01:intron 60.0%
CACGTCCACCACATTCCCCG+TGG + Chr3:74291552-74291571 None:intergenic 65.0%
CGCGTTAGTGTCATGGCCGG+TGG + Chr3:74288794-74288813 None:intergenic 65.0%
GCGCGAGAAGGCAGTAGGGT+GGG - Chr3:74289575-74289594 MsG0380015727.01.T01:CDS 65.0%
AGGGCGCGCGAGAAGGCAGT+AGG - Chr3:74289570-74289589 MsG0380015727.01.T01:CDS 70.0%
CGCGCGAGAAGGCAGTAGGG+TGG - Chr3:74289574-74289593 MsG0380015727.01.T01:CDS 70.0%
GGGCGCGCGAGAAGGCAGTA+GGG - Chr3:74289571-74289590 MsG0380015727.01.T01:CDS 70.0%
Chromosome Type Strat End Strand Name
Chr3 gene 74288593 74292941 74288593 ID=MsG0380015727.01;Name=MsG0380015727.01
Chr3 mRNA 74288593 74292941 74288593 ID=MsG0380015727.01.T01;Parent=MsG0380015727.01;Name=MsG0380015727.01.T01;_AED=0.44;_eAED=0.44;_QI=0|0|0|0.8|0|0.4|5|0|332
Chr3 exon 74292721 74292941 74292721 ID=MsG0380015727.01.T01:exon:14268;Parent=MsG0380015727.01.T01
Chr3 exon 74290521 74290704 74290521 ID=MsG0380015727.01.T01:exon:14267;Parent=MsG0380015727.01.T01
Chr3 exon 74290270 74290420 74290270 ID=MsG0380015727.01.T01:exon:14266;Parent=MsG0380015727.01.T01
Chr3 exon 74289404 74289623 74289404 ID=MsG0380015727.01.T01:exon:14265;Parent=MsG0380015727.01.T01
Chr3 exon 74288593 74288815 74288593 ID=MsG0380015727.01.T01:exon:14264;Parent=MsG0380015727.01.T01
Chr3 CDS 74292721 74292941 74292721 ID=MsG0380015727.01.T01:cds;Parent=MsG0380015727.01.T01
Chr3 CDS 74290521 74290704 74290521 ID=MsG0380015727.01.T01:cds;Parent=MsG0380015727.01.T01
Chr3 CDS 74290270 74290420 74290270 ID=MsG0380015727.01.T01:cds;Parent=MsG0380015727.01.T01
Chr3 CDS 74289404 74289623 74289404 ID=MsG0380015727.01.T01:cds;Parent=MsG0380015727.01.T01
Chr3 CDS 74288593 74288815 74288593 ID=MsG0380015727.01.T01:cds;Parent=MsG0380015727.01.T01
Gene Sequence

>MsG0380015727.01.T01

ATGAAAGACCAACGATGGAAAACCATGGTTGTAGAAGGAAGAAGAGGAGGAGAGGATGATGTGAGAAATGGTGGGGTTTGGAAGGGTATTTATAGGGAGGGGTGGGTGAAAAATGGTTGGGAAGCCATAAATGCAGTCAAAAAACGTGGTAAAACACGTTTTTTTGACTTGACCACTGTCAAAAACGTGTGGTGCAGACCACCGGCCATGACACTAACGCGTTGCTTTTATTCTCATCCATGTCGCTCATTTCCAACACTCACACCTCTTTCCCTCACTCCCAACTCAACCAATGGCTTCTCTGTTTCTCCCATTGTCTCCCCCACCCGCTTTTCCCCCAAAACTTACATTTATATCCATACTCCTAGTGGCATAGTACCCTTTCCAGTGCACGCAACCGTTCTGGTTTCAGCGTCCCCAGTTCTAAAAGAAATGGTAACGTCCAACGGTAACGTTAAAATATGTGGTGTTCCAACCAATGCAGCCATCGCCTTTGTACATTTCATCTACACTTCCAGGTCAGTAATAGTGAAATTAAATAACTACTCATTTTTACAAGGTTGCACCAACGTGGCATCATATGATGTGGAGATTACGGGGAGGCCGTGTACTAAATTCTCCACATGTCAAGCTTTGCAGGGGTTGATCAAACACTTTACCACATGTAATAGGAGACTCGAGAGAGGGTGTAGGTGTTGTAAGTCTATGTGGCAACTACTTAGACTGCACTCTTGCATTTGTTTTAACCAAGATGCATGCAAGGTTCCTCTTTGCAGGAAATATCAATTGATAGCTGAGAAAGAGAACAAGGAAGGTGATACGAGGTGGAAACAAATAGTGGGGAAAGTAGCATCAACCATAGCCATGTCTTCCTTACAATTGCTAAGGACAAGGAGAGATGAGGTAATTCGGAATACTAGAGTAGAGGAAGAGGAAGATCAGTCAAGAGAGTCTTCTAATTGGTGGACAAATGCAATTGCATGTTTTCGGTGTATCTAA
Protein sequence

>MsG0380015727.01.T01

MKDQRWKTMVVEGRRGGEDDVRNGGVWKGIYREGWVKNGWEAINAVKKRGKTRFFDLTTVKNVWCRPPAMTLTRCFYSHPCRSFPTLTPLSLTPNSTNGFSVSPIVSPTRFSPKTYIYIHTPSGIVPFPVHATVLVSASPVLKEMVTSNGNVKICGVPTNAAIAFVHFIYTSRSVIVKLNNYSFLQGCTNVASYDVEITGRPCTKFSTCQALQGLIKHFTTCNRRLERGCRCCKSMWQLLRLHSCICFNQDACKVPLCRKYQLIAEKENKEGDTRWKQIVGKVASTIAMSSLQLLRTRRDEVIRNTRVEEEEDQSRESSNWWTNAIACFRCI*