Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380015861.01.T01 | XP_013461072.1 | 94.704 | 642 | 17 | 7 | 1 | 638 | 1 | 629 | 0 | 1243 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380015861.01.T01 | O24606 | 57.121 | 653 | 237 | 15 | 3 | 637 | 1 | 628 | 0 | 681 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380015861.01.T01 | D0EXG5 | 94.704 | 642 | 17 | 7 | 1 | 638 | 1 | 629 | 0.0 | 1243 |
| Gene ID | Type | Classification |
|---|---|---|
| MsG0380015861.01.T01 | TF | EIL |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380015861.01.T01 | MTR_3g078770 | 94.704 | 642 | 17 | 7 | 1 | 638 | 1 | 629 | 0.0 | 1243 |
| MsG0380015861.01.T01 | MTR_5g087790 | 68.527 | 645 | 161 | 18 | 2 | 636 | 1 | 613 | 0.0 | 835 |
| MsG0380015861.01.T01 | MTR_2g098470 | 63.725 | 306 | 97 | 4 | 41 | 334 | 27 | 330 | 3.27e-130 | 397 |
| MsG0380015861.01.T01 | MTR_3g087530 | 63.953 | 258 | 82 | 4 | 49 | 301 | 29 | 280 | 6.22e-112 | 343 |
| MsG0380015861.01.T01 | MTR_6g060600 | 38.569 | 503 | 263 | 9 | 26 | 520 | 17 | 481 | 8.88e-110 | 345 |
| MsG0380015861.01.T01 | MTR_6g460640 | 50.479 | 313 | 144 | 4 | 26 | 333 | 17 | 323 | 8.20e-107 | 337 |
| MsG0380015861.01.T01 | MTR_8g091370 | 60.232 | 259 | 97 | 3 | 46 | 301 | 16 | 271 | 2.22e-105 | 327 |
| MsG0380015861.01.T01 | MTR_3g010790 | 52.000 | 250 | 116 | 2 | 106 | 351 | 1 | 250 | 4.64e-89 | 286 |
| MsG0380015861.01.T01 | MTR_1g024420 | 44.660 | 103 | 55 | 1 | 48 | 148 | 6 | 108 | 5.12e-26 | 103 |
| MsG0380015861.01.T01 | MTR_7g095580 | 42.056 | 107 | 44 | 3 | 95 | 189 | 1 | 101 | 5.39e-19 | 82.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380015861.01.T01 | AT3G20770 | 57.121 | 653 | 237 | 15 | 3 | 637 | 1 | 628 | 0.0 | 681 |
| MsG0380015861.01.T01 | AT2G27050 | 58.725 | 596 | 181 | 18 | 2 | 572 | 1 | 556 | 0.0 | 627 |
| MsG0380015861.01.T01 | AT1G73730 | 62.541 | 307 | 93 | 6 | 43 | 334 | 29 | 328 | 7.15e-126 | 384 |
| MsG0380015861.01.T01 | AT1G73730 | 62.541 | 307 | 93 | 6 | 43 | 334 | 17 | 316 | 7.82e-126 | 383 |
| MsG0380015861.01.T01 | AT5G21120 | 46.578 | 453 | 187 | 13 | 2 | 436 | 8 | 423 | 1.51e-119 | 366 |
| MsG0380015861.01.T01 | AT5G21120 | 46.578 | 453 | 187 | 13 | 2 | 436 | 1 | 416 | 1.72e-119 | 365 |
| MsG0380015861.01.T01 | AT5G21120 | 46.578 | 453 | 187 | 13 | 2 | 436 | 1 | 416 | 1.72e-119 | 365 |
| MsG0380015861.01.T01 | AT5G65100 | 44.208 | 423 | 191 | 11 | 47 | 432 | 33 | 447 | 4.22e-105 | 330 |
| MsG0380015861.01.T01 | AT5G10120 | 58.015 | 262 | 107 | 1 | 43 | 301 | 14 | 275 | 9.55e-104 | 323 |
Find 209 sgRNAs with CRISPR-Local
Find 240 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTTACAAGCTTGCGAATTT+TGG | 0.116142 | 3:-76014713 | None:intergenic |
| GGCTCTTCTTCATCTGATTT+TGG | 0.161207 | 3:+76015213 | MsG0380015861.01.T01:CDS |
| ATCTTTCGGTAAACCGATTT+GGG | 0.200055 | 3:-76014593 | None:intergenic |
| AATAATTTCCATTTAATGTT+TGG | 0.231056 | 3:+76015693 | MsG0380015861.01.T01:CDS |
| GTGGGGACCCAAACATTAAA+TGG | 0.259726 | 3:-76015701 | None:intergenic |
| CCAAGCTGACAATGCAATTC+CGG | 0.279173 | 3:+76014387 | MsG0380015861.01.T01:CDS |
| GATCTTTCGGTAAACCGATT+TGG | 0.301097 | 3:-76014594 | None:intergenic |
| CCGATGTGAGCTTGGCTATA+AGG | 0.303939 | 3:-76015138 | None:intergenic |
| AATTCAAAGCTTTGAACCTT+TGG | 0.308642 | 3:-76015623 | None:intergenic |
| AATGGCTCAGCCGGTTAATA+TGG | 0.309330 | 3:+76015305 | MsG0380015861.01.T01:CDS |
| ATAATTTCCATTTAATGTTT+GGG | 0.318681 | 3:+76015694 | MsG0380015861.01.T01:CDS |
| GGTCACAGGCTTTCCTTTCT+CGG | 0.320948 | 3:-76014284 | None:intergenic |
| CATGTGATGATGATTGTTAT+TGG | 0.322259 | 3:-76015574 | None:intergenic |
| ACCGGCTGAGCCATTGGTTT+CGG | 0.323642 | 3:-76015297 | None:intergenic |
| GGTGCTTCTCAAGCGATTAA+AGG | 0.326570 | 3:+76014099 | MsG0380015861.01.T01:CDS |
| GTCAGCTTGGTACTTGGATA+TGG | 0.327342 | 3:-76014374 | None:intergenic |
| CGTTCCTCCACATCAAAATT+CGG | 0.328270 | 3:-76014919 | None:intergenic |
| AGGCTCAAGGGTTTGTTTAC+GGG | 0.333360 | 3:+76014254 | MsG0380015861.01.T01:CDS |
| CCAAAATTCGCAAGCTTGTA+AGG | 0.334057 | 3:+76014713 | MsG0380015861.01.T01:CDS |
| CAGATATTTCTTCATCAGTA+TGG | 0.343697 | 3:+76015799 | MsG0380015861.01.T01:CDS |
| AAGGCTCAAGGGTTTGTTTA+CGG | 0.347915 | 3:+76014253 | MsG0380015861.01.T01:CDS |
| GGCGGAGGACCTTGATCTTT+CGG | 0.355023 | 3:-76014607 | None:intergenic |
| CCTCCTCCATGGTGGCCTAC+AGG | 0.364645 | 3:+76014553 | MsG0380015861.01.T01:CDS |
| GATGAAGAAGAGCCTCTATA+TGG | 0.374646 | 3:-76015204 | None:intergenic |
| AAAGGTCCAGCTGCGACAAA+TGG | 0.377442 | 3:-76014847 | None:intergenic |
| TTGATTGACGATTGCAAGCC+AGG | 0.380797 | 3:-76014782 | None:intergenic |
| GTCACAGGCTTTCCTTTCTC+GGG | 0.386577 | 3:-76014283 | None:intergenic |
| GCCACATCGGATCCTTCCTT+CGG | 0.391242 | 3:-76014133 | None:intergenic |
| TTCTTCATCAATCCAACATT+GGG | 0.399620 | 3:+76014956 | MsG0380015861.01.T01:CDS |
| TTCCTGGGATTGCCTCTGCT+TGG | 0.399959 | 3:-76014155 | None:intergenic |
| GAGGAGGATGTGGAGGGATA+AGG | 0.401050 | 3:+76014078 | MsG0380015861.01.T01:CDS |
| TGCATTGTCAGCTTGGTACT+TGG | 0.401725 | 3:-76014380 | None:intergenic |
| CCACCTTCCATCGATATAAC+TGG | 0.402818 | 3:+76015330 | MsG0380015861.01.T01:CDS |
| CATATCTCCCTTGAACTCAT+AGG | 0.404451 | 3:-76015739 | None:intergenic |
| AGATCATGAGGTTTCTTGTA+AGG | 0.405253 | 3:-76014628 | None:intergenic |
| ATTGCGAAAGTCTGCTGAAA+TGG | 0.405530 | 3:-76015009 | None:intergenic |
| TTTCCTCCTTGCCTGTTCCT+GGG | 0.410461 | 3:-76014170 | None:intergenic |
| CAAGCTGACAATGCAATTCC+GGG | 0.413671 | 3:+76014388 | MsG0380015861.01.T01:CDS |
| AAGGTCCAGCTGCGACAAAT+GGG | 0.416033 | 3:-76014846 | None:intergenic |
| TTTGTCGCAGCTGGACCTTT+CGG | 0.419285 | 3:+76014850 | MsG0380015861.01.T01:CDS |
| TCGCCTCAGGTTCAGTTAGC+CGG | 0.423673 | 3:-76014006 | None:intergenic |
| GATTGATGAAGAAGATTCTC+AGG | 0.425025 | 3:-76014946 | None:intergenic |
| CATACTGATGAAGAAATATC+TGG | 0.429090 | 3:-76015798 | None:intergenic |
| TCAATCCAACATTGGGATGA+TGG | 0.429901 | 3:+76014963 | MsG0380015861.01.T01:CDS |
| CCGGAATTGCATTGTCAGCT+TGG | 0.430474 | 3:-76014387 | None:intergenic |
| GATCATGAGATGGCTCTATC+TGG | 0.431769 | 3:+76013929 | MsG0380015861.01.T01:CDS |
| GGCAACATGAATTTAACTTC+TGG | 0.433244 | 3:+76015423 | MsG0380015861.01.T01:CDS |
| CCCTCAGAGGCGGTTTCCAT+TGG | 0.434105 | 3:+76014519 | MsG0380015861.01.T01:CDS |
| ACCTCATTAGCATGAAAACT+TGG | 0.436185 | 3:-76015240 | None:intergenic |
| GCAGCTCTTGCAAGGTGTGA+GGG | 0.439936 | 3:-76014444 | None:intergenic |
| CCGCGAATGGTGGAAGGATA+AGG | 0.449952 | 3:+76014324 | MsG0380015861.01.T01:CDS |
| GCAGAGGCAATCCCAGGAAC+AGG | 0.451574 | 3:+76014159 | MsG0380015861.01.T01:CDS |
| CTCCTCCATGGTGGCCTACA+GGG | 0.453443 | 3:+76014554 | MsG0380015861.01.T01:CDS |
| CCTTATCCTTCCACCATTCG+CGG | 0.453482 | 3:-76014324 | None:intergenic |
| GTGAGGAAGCGGAAGATCTC+TGG | 0.455579 | 3:+76015063 | MsG0380015861.01.T01:CDS |
| TACGGGATCATTCCCGAGAA+AGG | 0.459725 | 3:+76014271 | MsG0380015861.01.T01:CDS |
| GAAGGTGGAACCATATTAAC+CGG | 0.463028 | 3:-76015315 | None:intergenic |
| CTTCTTCATCAATCCAACAT+TGG | 0.463424 | 3:+76014955 | MsG0380015861.01.T01:CDS |
| AGCAGCATGAGAATTACTTC+AGG | 0.465101 | 3:+76015502 | MsG0380015861.01.T01:CDS |
| TCAGCAGACTTTCGCAATGA+AGG | 0.468808 | 3:+76015014 | MsG0380015861.01.T01:CDS |
| ATGATTGTTATTGGACATGT+TGG | 0.474263 | 3:-76015565 | None:intergenic |
| TGCAGCTCTTGCAAGGTGTG+AGG | 0.478278 | 3:-76014445 | None:intergenic |
| GAGAAAGGAAAGCCTGTGAC+CGG | 0.478282 | 3:+76014286 | MsG0380015861.01.T01:CDS |
| ATATTAACCGGCTGAGCCAT+TGG | 0.478420 | 3:-76015303 | None:intergenic |
| GTATCCCTAGAAGCCCTGTC+TGG | 0.478900 | 3:-76015165 | None:intergenic |
| GTCTATGATTCAGATATTCA+AGG | 0.479340 | 3:+76015402 | MsG0380015861.01.T01:CDS |
| TCACACCTTGCAAGAGCTGC+AGG | 0.479872 | 3:+76014447 | MsG0380015861.01.T01:CDS |
| CGCCTCAGGTTCAGTTAGCC+GGG | 0.481589 | 3:-76014005 | None:intergenic |
| GATGGCTCTATCTGGTGATC+TGG | 0.482695 | 3:+76013937 | MsG0380015861.01.T01:CDS |
| TCTTGCAAGGTGTGAGGGGT+TGG | 0.482958 | 3:-76014439 | None:intergenic |
| CACATGTTTGCAAGAGATGA+AGG | 0.486109 | 3:+76015591 | MsG0380015861.01.T01:CDS |
| GCTCCCCAACCCCAAGTTGA+GGG | 0.486678 | 3:+76013971 | MsG0380015861.01.T01:CDS |
| TGCTCCCCAACCCCAAGTTG+AGG | 0.487998 | 3:+76013970 | MsG0380015861.01.T01:CDS |
| TCCTTCCCTGTAGGCCACCA+TGG | 0.488917 | 3:-76014559 | None:intergenic |
| CTCTGGTGAATTTAACATGA+TGG | 0.489439 | 3:+76015080 | MsG0380015861.01.T01:CDS |
| GAGAATTACTTCAGGGGTCA+AGG | 0.490089 | 3:+76015510 | MsG0380015861.01.T01:CDS |
| CATGCCTTCTTCAGATCATG+AGG | 0.490321 | 3:-76014640 | None:intergenic |
| TTTCTGAAGATGGTGAGAAA+AGG | 0.494881 | 3:+76015361 | MsG0380015861.01.T01:CDS |
| CCAATGGAAACCGCCTCTGA+GGG | 0.495394 | 3:-76014519 | None:intergenic |
| CCGAGCTTGAGAGGAGGATG+TGG | 0.496132 | 3:+76014068 | MsG0380015861.01.T01:CDS |
| AATGGTGGAAGGATAAGGTT+AGG | 0.496339 | 3:+76014329 | MsG0380015861.01.T01:CDS |
| GCAATTCCGGGGAAGAATGA+TGG | 0.501691 | 3:+76014400 | MsG0380015861.01.T01:CDS |
| TTTGACATCCTATGAGTTCA+AGG | 0.502925 | 3:+76015731 | MsG0380015861.01.T01:CDS |
| CGGATAATCTCCGCGAATGG+TGG | 0.504192 | 3:+76014314 | MsG0380015861.01.T01:CDS |
| ACCGAAACCAATGGCTCAGC+CGG | 0.505945 | 3:+76015296 | MsG0380015861.01.T01:CDS |
| TCTTCGTCAACCATCGCCTC+AGG | 0.506692 | 3:-76014019 | None:intergenic |
| GGACTTGGAGTTTCTGAAGA+TGG | 0.507451 | 3:+76015351 | MsG0380015861.01.T01:CDS |
| CTGAAGAAGGCATGGAAGGT+TGG | 0.507865 | 3:+76014649 | MsG0380015861.01.T01:CDS |
| TTATCCGATGCCCCGGTCAC+AGG | 0.510724 | 3:-76014298 | None:intergenic |
| TCTCTCCATCATCCCAATGT+TGG | 0.511441 | 3:-76014968 | None:intergenic |
| AGAAGGGTGTTCCTCCTCCA+TGG | 0.516637 | 3:+76014542 | MsG0380015861.01.T01:CDS |
| ATGGAGGTTTGCAAGGCTCA+AGG | 0.517295 | 3:+76014241 | MsG0380015861.01.T01:CDS |
| GGAAGAGGCTGTGACCAACT+TGG | 0.519473 | 3:+76015035 | MsG0380015861.01.T01:CDS |
| GGCCAAGCAGAGGCAATCCC+AGG | 0.519869 | 3:+76014153 | MsG0380015861.01.T01:CDS |
| AGGATAAAGCTCCCGCGCTA+AGG | 0.520455 | 3:-76014812 | None:intergenic |
| GAGCTGCAGGACACAACCTT+GGG | 0.520799 | 3:+76014460 | MsG0380015861.01.T01:CDS |
| ACTTGGATTTCGTGAGGAAG+CGG | 0.521923 | 3:+76015052 | MsG0380015861.01.T01:CDS |
| CAATTGAGTTGTCCATATAG+AGG | 0.522292 | 3:+76015192 | MsG0380015861.01.T01:CDS |
| AAAGCCTGTGACCGGGGCAT+CGG | 0.525234 | 3:+76014294 | MsG0380015861.01.T01:CDS |
| GGACCTTTCGGCATCAATGA+AGG | 0.525234 | 3:+76014862 | MsG0380015861.01.T01:CDS |
| AGAAAGGAAAGCCTGTGACC+GGG | 0.526532 | 3:+76014287 | MsG0380015861.01.T01:CDS |
| TGTGTCCTGCAGCTCTTGCA+AGG | 0.529578 | 3:-76014452 | None:intergenic |
| TGATTGTGATTGTTCTCAAA+GGG | 0.531892 | 3:-76015648 | None:intergenic |
| ATCGGTTTACCGAAAGATCA+AGG | 0.532949 | 3:+76014598 | MsG0380015861.01.T01:CDS |
| GAGGCGGTTTCCATTGGAGA+AGG | 0.533081 | 3:+76014525 | MsG0380015861.01.T01:CDS |
| CTGGAAAACCGATGTGAGCT+TGG | 0.533885 | 3:-76015146 | None:intergenic |
| GAAGAGTGGTGGCCCCAAAT+CGG | 0.536945 | 3:+76014580 | MsG0380015861.01.T01:CDS |
| CGGCTAAGGAAAGTGCAACC+TGG | 0.537233 | 3:+76014764 | MsG0380015861.01.T01:CDS |
| TCAAGATAAAATGACGGCTA+AGG | 0.537615 | 3:+76014750 | MsG0380015861.01.T01:CDS |
| TGCTGAATGCTGCTAGCTTG+CGG | 0.538137 | 3:-76015480 | None:intergenic |
| TGAGGTTTCTTGTAAGGCGG+AGG | 0.540347 | 3:-76014622 | None:intergenic |
| GAAGTACATGCTGAAAATGA+TGG | 0.543075 | 3:+76014222 | MsG0380015861.01.T01:CDS |
| GTGTGAGGGGTTGGACCGAT+CGG | 0.543206 | 3:-76014430 | None:intergenic |
| GAAAGGAAAGCCTGTGACCG+GGG | 0.544653 | 3:+76014288 | MsG0380015861.01.T01:CDS |
| GACTTTCGCAATGAAGGAAG+AGG | 0.546905 | 3:+76015020 | MsG0380015861.01.T01:CDS |
| TTGCCTCCATCATTCTTCCC+CGG | 0.547718 | 3:-76014406 | None:intergenic |
| CTCATGATCTGAAGAAGGCA+TGG | 0.547916 | 3:+76014641 | MsG0380015861.01.T01:CDS |
| TTGATGTTGCCGAGCTTGAG+AGG | 0.548157 | 3:+76014059 | MsG0380015861.01.T01:CDS |
| GCAATGAGTATGATGTCGAT+GGG | 0.548446 | 3:+76014884 | MsG0380015861.01.T01:CDS |
| GAAACCTCATGATCTGAAGA+AGG | 0.550430 | 3:+76014636 | MsG0380015861.01.T01:CDS |
| TGGTACTTGGATATGGCAGC+AGG | 0.551180 | 3:-76014367 | None:intergenic |
| AGAGCTGCAGGACACAACCT+TGG | 0.551353 | 3:+76014459 | MsG0380015861.01.T01:CDS |
| TTGCCTCTGCTTGGCCACAT+CGG | 0.554658 | 3:-76014146 | None:intergenic |
| GCAGCATGAGAATTACTTCA+GGG | 0.554925 | 3:+76015503 | MsG0380015861.01.T01:CDS |
| TAATCTCCGCGAATGGTGGA+AGG | 0.556888 | 3:+76014318 | MsG0380015861.01.T01:CDS |
| CACCACTCTTCCTTCCCTGT+AGG | 0.558000 | 3:-76014568 | None:intergenic |
| GTGATTGTGATTGTTCTCAA+AGG | 0.561089 | 3:-76015649 | None:intergenic |
| AGCTTGAGAGGAGGATGTGG+AGG | 0.561978 | 3:+76014071 | MsG0380015861.01.T01:CDS |
| TGCAGATAAGAGAGAACCCA+AGG | 0.562468 | 3:-76014476 | None:intergenic |
| TCCAAGTCCAGTTATATCGA+TGG | 0.562663 | 3:-76015337 | None:intergenic |
| CCTGTAGGCCACCATGGAGG+AGG | 0.564770 | 3:-76014553 | None:intergenic |
| GGCAATCCCAGGAACAGGCA+AGG | 0.565695 | 3:+76014164 | MsG0380015861.01.T01:CDS |
| TCCAATGGAAACCGCCTCTG+AGG | 0.567003 | 3:-76014520 | None:intergenic |
| CAGCTCTTGCAAGGTGTGAG+GGG | 0.568677 | 3:-76014443 | None:intergenic |
| TGGAGGTTTGCAAGGCTCAA+GGG | 0.571141 | 3:+76014242 | MsG0380015861.01.T01:CDS |
| TGATCTGAAGAAGGCATGGA+AGG | 0.572466 | 3:+76014645 | MsG0380015861.01.T01:CDS |
| TATGCATGGAGTAGGCATCA+TGG | 0.573987 | 3:+76015758 | MsG0380015861.01.T01:CDS |
| ATGAAGGTCAATTTGACCAA+AGG | 0.575029 | 3:+76015607 | MsG0380015861.01.T01:CDS |
| GGCCTACAGGGAAGGAAGAG+TGG | 0.575468 | 3:+76014566 | MsG0380015861.01.T01:CDS |
| TCCATCGATATAACTGGACT+TGG | 0.575840 | 3:+76015336 | MsG0380015861.01.T01:CDS |
| GGTCCAGCTGCGACAAATGG+GGG | 0.576693 | 3:-76014844 | None:intergenic |
| AAGGGAGATATGCATGGAGT+AGG | 0.577953 | 3:+76015750 | MsG0380015861.01.T01:CDS |
| TTACTTCAGGGGTCAAGGAA+TGG | 0.577986 | 3:+76015515 | MsG0380015861.01.T01:CDS |
| GGAGGAACACCCTTCTCCAA+TGG | 0.579400 | 3:-76014535 | None:intergenic |
| AGGTCCAGCTGCGACAAATG+GGG | 0.579864 | 3:-76014845 | None:intergenic |
| GCTAACTGAACCTGAGGCGA+TGG | 0.580269 | 3:+76014009 | MsG0380015861.01.T01:CDS |
| AGGATGTCAAATCACAATGT+GGG | 0.580845 | 3:-76015719 | None:intergenic |
| CTCCCCAACCCCAAGTTGAG+GGG | 0.581721 | 3:+76013972 | MsG0380015861.01.T01:CDS |
| CTTCCTCACGAAATCCAAGT+TGG | 0.583208 | 3:-76015049 | None:intergenic |
| AATGGAAACCGCCTCTGAGG+GGG | 0.586396 | 3:-76014517 | None:intergenic |
| GAGTTCAAGGGAGATATGCA+TGG | 0.587678 | 3:+76015744 | MsG0380015861.01.T01:CDS |
| TCAAGAGGAGGCCTTAGCGC+GGG | 0.589414 | 3:+76014801 | MsG0380015861.01.T01:CDS |
| TCCATGGTGGCCTACAGGGA+AGG | 0.589968 | 3:+76014558 | MsG0380015861.01.T01:CDS |
| TTGACATCCTATGAGTTCAA+GGG | 0.590024 | 3:+76015732 | MsG0380015861.01.T01:CDS |
| GAAAATGATGGAGGTTTGCA+AGG | 0.591397 | 3:+76014234 | MsG0380015861.01.T01:CDS |
| AAGATGTCAAGGGCTCAAGA+TGG | 0.596334 | 3:+76014193 | MsG0380015861.01.T01:CDS |
| GGTCAAGGAATGGTGATGGA+AGG | 0.597963 | 3:+76015525 | MsG0380015861.01.T01:CDS |
| CAGGGGTCAAGGAATGGTGA+TGG | 0.599899 | 3:+76015521 | MsG0380015861.01.T01:CDS |
| TTGCCTTCATTGATGCCGAA+AGG | 0.600278 | 3:-76014865 | None:intergenic |
| GAAGATGGTGAGAAAAGGAT+TGG | 0.601828 | 3:+76015366 | MsG0380015861.01.T01:CDS |
| GAGCAAGTCAAACCGAAGGA+AGG | 0.602432 | 3:+76014121 | MsG0380015861.01.T01:CDS |
| AAGGTTAGGTTTGACCGCAA+CGG | 0.602662 | 3:+76014343 | MsG0380015861.01.T01:CDS |
| AATGACTGAGGATATATGAC+TGG | 0.604420 | 3:-76015267 | None:intergenic |
| CCAGTTATATCGATGGAAGG+TGG | 0.610149 | 3:-76015330 | None:intergenic |
| TCCCCAACCCCAAGTTGAGG+GGG | 0.613156 | 3:+76013973 | MsG0380015861.01.T01:CDS |
| CGCCCGGCTAACTGAACCTG+AGG | 0.614118 | 3:+76014003 | MsG0380015861.01.T01:CDS |
| GATCCGATGTGGCCAAGCAG+AGG | 0.615121 | 3:+76014143 | MsG0380015861.01.T01:CDS |
| CCACATCCTCCTCTCAAGCT+CGG | 0.615219 | 3:-76014068 | None:intergenic |
| GGCAATGAGTATGATGTCGA+TGG | 0.618237 | 3:+76014883 | MsG0380015861.01.T01:CDS |
| AGGCGGTTTCCATTGGAGAA+GGG | 0.619284 | 3:+76014526 | MsG0380015861.01.T01:CDS |
| CATCGGATAATCTCCGCGAA+TGG | 0.620613 | 3:+76014311 | MsG0380015861.01.T01:CDS |
| TCTTTCGGTAAACCGATTTG+GGG | 0.621358 | 3:-76014592 | None:intergenic |
| GCGGAGATTATCCGATGCCC+CGG | 0.628966 | 3:-76014305 | None:intergenic |
| TAGGATGTCAAATCACAATG+TGG | 0.629786 | 3:-76015720 | None:intergenic |
| TCATGAGGTTTCTTGTAAGG+CGG | 0.630329 | 3:-76014625 | None:intergenic |
| GATGATGTTTGATCATGAGA+TGG | 0.631968 | 3:+76013919 | MsG0380015861.01.T01:CDS |
| AATGATGGAGGCAATCCGAT+CGG | 0.634526 | 3:+76014415 | MsG0380015861.01.T01:CDS |
| GCTTGCAATCGTCAATCAAG+AGG | 0.634856 | 3:+76014786 | MsG0380015861.01.T01:CDS |
| ATCAAGAGGAGGCCTTAGCG+CGG | 0.637665 | 3:+76014800 | MsG0380015861.01.T01:CDS |
| GCTTGAGAGGAGGATGTGGA+GGG | 0.637705 | 3:+76014072 | MsG0380015861.01.T01:CDS |
| TGACCAACTTGGATTTCGTG+AGG | 0.639847 | 3:+76015046 | MsG0380015861.01.T01:CDS |
| TGCAATCGTCAATCAAGAGG+AGG | 0.640235 | 3:+76014789 | MsG0380015861.01.T01:CDS |
| CCTTATAGCCAAGCTCACAT+CGG | 0.641231 | 3:+76015138 | MsG0380015861.01.T01:CDS |
| ATTCGTTCAACCGAAACCAA+TGG | 0.641894 | 3:+76015287 | MsG0380015861.01.T01:CDS |
| AGTCCAGTTATATCGATGGA+AGG | 0.642356 | 3:-76015333 | None:intergenic |
| ATGCCTTCAAGATAAAATGA+CGG | 0.643938 | 3:+76014744 | MsG0380015861.01.T01:CDS |
| GGATGTCAAATCACAATGTG+GGG | 0.645049 | 3:-76015718 | None:intergenic |
| AAAGGAGCAAGTCAAACCGA+AGG | 0.648111 | 3:+76014117 | MsG0380015861.01.T01:CDS |
| GATGGTGAGAAAAGGATTGG+TGG | 0.649012 | 3:+76015369 | MsG0380015861.01.T01:CDS |
| ATATGGCAGCAGGACCGTTG+CGG | 0.650469 | 3:-76014357 | None:intergenic |
| TATAAGGACATGTTGAGTGT+TGG | 0.651109 | 3:-76015122 | None:intergenic |
| AGGGTGTTCCTCCTCCATGG+TGG | 0.653236 | 3:+76014545 | MsG0380015861.01.T01:CDS |
| TTCGGTTGAACGAATGACTG+AGG | 0.658942 | 3:-76015279 | None:intergenic |
| CAATGGAAACCGCCTCTGAG+GGG | 0.659298 | 3:-76014518 | None:intergenic |
| GTCCAGCTGCGACAAATGGG+GGG | 0.662952 | 3:-76014843 | None:intergenic |
| CTACAGGGAAGGAAGAGTGG+TGG | 0.665816 | 3:+76014569 | MsG0380015861.01.T01:CDS |
| CAATGAGTATGATGTCGATG+GGG | 0.670997 | 3:+76014885 | MsG0380015861.01.T01:CDS |
| AATGAGTATGATGTCGATGG+GGG | 0.671000 | 3:+76014886 | MsG0380015861.01.T01:CDS |
| AATCCCAGGAACAGGCAAGG+AGG | 0.672658 | 3:+76014167 | MsG0380015861.01.T01:CDS |
| TTCCCTGTAGGCCACCATGG+AGG | 0.673523 | 3:-76014556 | None:intergenic |
| ATGTTGCCGAGCTTGAGAGG+AGG | 0.673867 | 3:+76014062 | MsG0380015861.01.T01:CDS |
| ATTCCGGGGAAGAATGATGG+AGG | 0.679869 | 3:+76014403 | MsG0380015861.01.T01:CDS |
| AAGCTGACAATGCAATTCCG+GGG | 0.692590 | 3:+76014389 | MsG0380015861.01.T01:CDS |
| CTGAATCATAGACAGTCATG+AGG | 0.695799 | 3:-76015392 | None:intergenic |
| CAGCATGAGAATTACTTCAG+GGG | 0.700026 | 3:+76015504 | MsG0380015861.01.T01:CDS |
| ACCGAAGGAAGGATCCGATG+TGG | 0.703875 | 3:+76014132 | MsG0380015861.01.T01:CDS |
| CTCAGGTTCAGTTAGCCGGG+CGG | 0.704152 | 3:-76014002 | None:intergenic |
| TGGCAGCCACTTAACCGCAG+CGG | 0.706818 | 3:+76015443 | MsG0380015861.01.T01:CDS |
| GTACATGCTGAAAATGATGG+AGG | 0.724912 | 3:+76014225 | MsG0380015861.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATAATTTCCATTTAATGTT+TGG | + | Chr3:76015693-76015712 | MsG0380015861.01.T01:CDS | 15.0% |
| !! | ATAATTTCCATTTAATGTTT+GGG | + | Chr3:76015694-76015713 | MsG0380015861.01.T01:CDS | 15.0% |
| ATGCCTTCAAGATAAAATGA+CGG | + | Chr3:76014744-76014763 | MsG0380015861.01.T01:CDS | 30.0% | |
| CAGATATTTCTTCATCAGTA+TGG | + | Chr3:76015799-76015818 | MsG0380015861.01.T01:CDS | 30.0% | |
| CATACTGATGAAGAAATATC+TGG | - | Chr3:76015801-76015820 | None:intergenic | 30.0% | |
| GTCTATGATTCAGATATTCA+AGG | + | Chr3:76015402-76015421 | MsG0380015861.01.T01:CDS | 30.0% | |
| TGATTGTGATTGTTCTCAAA+GGG | - | Chr3:76015651-76015670 | None:intergenic | 30.0% | |
| TTCTTCATCAATCCAACATT+GGG | + | Chr3:76014956-76014975 | MsG0380015861.01.T01:CDS | 30.0% | |
| ! | ATGATTGTTATTGGACATGT+TGG | - | Chr3:76015568-76015587 | None:intergenic | 30.0% |
| ! | CATGTGATGATGATTGTTAT+TGG | - | Chr3:76015577-76015596 | None:intergenic | 30.0% |
| ! | TGTTGGCAAGTGAAAATTTT+AGG | - | Chr3:76015108-76015127 | None:intergenic | 30.0% |
| !! | AATTCAAAGCTTTGAACCTT+TGG | - | Chr3:76015626-76015645 | None:intergenic | 30.0% |
| !!! | CATTTTATCTTGAAGGCATT+TGG | - | Chr3:76014743-76014762 | None:intergenic | 30.0% |
| AAGGAGGAAAAAGATGTCAA+GGG | + | Chr3:76014183-76014202 | MsG0380015861.01.T01:CDS | 35.0% | |
| AATGACTGAGGATATATGAC+TGG | - | Chr3:76015270-76015289 | None:intergenic | 35.0% | |
| ACCTCATTAGCATGAAAACT+TGG | - | Chr3:76015243-76015262 | None:intergenic | 35.0% | |
| AGATCATGAGGTTTCTTGTA+AGG | - | Chr3:76014631-76014650 | None:intergenic | 35.0% | |
| AGGATGTCAAATCACAATGT+GGG | - | Chr3:76015722-76015741 | None:intergenic | 35.0% | |
| ATGAAGGTCAATTTGACCAA+AGG | + | Chr3:76015607-76015626 | MsG0380015861.01.T01:CDS | 35.0% | |
| CTCTGGTGAATTTAACATGA+TGG | + | Chr3:76015080-76015099 | MsG0380015861.01.T01:CDS | 35.0% | |
| CTTCTTCATCAATCCAACAT+TGG | + | Chr3:76014955-76014974 | MsG0380015861.01.T01:CDS | 35.0% | |
| GAAGTACATGCTGAAAATGA+TGG | + | Chr3:76014222-76014241 | MsG0380015861.01.T01:CDS | 35.0% | |
| GATGATGTTTGATCATGAGA+TGG | + | Chr3:76013919-76013938 | MsG0380015861.01.T01:CDS | 35.0% | |
| GATTGATGAAGAAGATTCTC+AGG | - | Chr3:76014949-76014968 | None:intergenic | 35.0% | |
| GTGATTGTGATTGTTCTCAA+AGG | - | Chr3:76015652-76015671 | None:intergenic | 35.0% | |
| TAGGATGTCAAATCACAATG+TGG | - | Chr3:76015723-76015742 | None:intergenic | 35.0% | |
| TATAAGGACATGTTGAGTGT+TGG | - | Chr3:76015125-76015144 | None:intergenic | 35.0% | |
| TCAAGATAAAATGACGGCTA+AGG | + | Chr3:76014750-76014769 | MsG0380015861.01.T01:CDS | 35.0% | |
| TTGACATCCTATGAGTTCAA+GGG | + | Chr3:76015732-76015751 | MsG0380015861.01.T01:CDS | 35.0% | |
| TTTGACATCCTATGAGTTCA+AGG | + | Chr3:76015731-76015750 | MsG0380015861.01.T01:CDS | 35.0% | |
| ! | ATCTTTCGGTAAACCGATTT+GGG | - | Chr3:76014596-76014615 | None:intergenic | 35.0% |
| ! | CAATTGAGTTGTCCATATAG+AGG | + | Chr3:76015192-76015211 | MsG0380015861.01.T01:CDS | 35.0% |
| ! | GGCAACATGAATTTAACTTC+TGG | + | Chr3:76015423-76015442 | MsG0380015861.01.T01:CDS | 35.0% |
| ! | TCCAAGTTTTCATGCTAATG+AGG | + | Chr3:76015239-76015258 | MsG0380015861.01.T01:CDS | 35.0% |
| ! | TCTTCTTCATCTGATTTTGG+TGG | + | Chr3:76015216-76015235 | MsG0380015861.01.T01:CDS | 35.0% |
| ! | TTTCTGAAGATGGTGAGAAA+AGG | + | Chr3:76015361-76015380 | MsG0380015861.01.T01:CDS | 35.0% |
| !! | TAGCCGTCATTTTATCTTGA+AGG | - | Chr3:76014750-76014769 | None:intergenic | 35.0% |
| AATGAGTATGATGTCGATGG+GGG | + | Chr3:76014886-76014905 | MsG0380015861.01.T01:CDS | 40.0% | |
| ACAAATGGGGGGATATAATC+AGG | - | Chr3:76014835-76014854 | None:intergenic | 40.0% | |
| AGCAGCATGAGAATTACTTC+AGG | + | Chr3:76015502-76015521 | MsG0380015861.01.T01:CDS | 40.0% | |
| AGTCCAGTTATATCGATGGA+AGG | - | Chr3:76015336-76015355 | None:intergenic | 40.0% | |
| ATTCGTTCAACCGAAACCAA+TGG | + | Chr3:76015287-76015306 | MsG0380015861.01.T01:CDS | 40.0% | |
| ATTGCGAAAGTCTGCTGAAA+TGG | - | Chr3:76015012-76015031 | None:intergenic | 40.0% | |
| CAAGGAGGAAAAAGATGTCA+AGG | + | Chr3:76014182-76014201 | MsG0380015861.01.T01:CDS | 40.0% | |
| CAATGAGTATGATGTCGATG+GGG | + | Chr3:76014885-76014904 | MsG0380015861.01.T01:CDS | 40.0% | |
| CACATGTTTGCAAGAGATGA+AGG | + | Chr3:76015591-76015610 | MsG0380015861.01.T01:CDS | 40.0% | |
| CAGCATGAGAATTACTTCAG+GGG | + | Chr3:76015504-76015523 | MsG0380015861.01.T01:CDS | 40.0% | |
| CATATCTCCCTTGAACTCAT+AGG | - | Chr3:76015742-76015761 | None:intergenic | 40.0% | |
| CCAAAATTCGCAAGCTTGTA+AGG | + | Chr3:76014713-76014732 | MsG0380015861.01.T01:CDS | 40.0% | |
| CGTTCCTCCACATCAAAATT+CGG | - | Chr3:76014922-76014941 | None:intergenic | 40.0% | |
| CTGAATCATAGACAGTCATG+AGG | - | Chr3:76015395-76015414 | None:intergenic | 40.0% | |
| GAAACCTCATGATCTGAAGA+AGG | + | Chr3:76014636-76014655 | MsG0380015861.01.T01:CDS | 40.0% | |
| GAAGATGGTGAGAAAAGGAT+TGG | + | Chr3:76015366-76015385 | MsG0380015861.01.T01:CDS | 40.0% | |
| GAAGGTGGAACCATATTAAC+CGG | - | Chr3:76015318-76015337 | None:intergenic | 40.0% | |
| GATCTTTCGGTAAACCGATT+TGG | - | Chr3:76014597-76014616 | None:intergenic | 40.0% | |
| GATGAAGAAGAGCCTCTATA+TGG | - | Chr3:76015207-76015226 | None:intergenic | 40.0% | |
| GCAATGAGTATGATGTCGAT+GGG | + | Chr3:76014884-76014903 | MsG0380015861.01.T01:CDS | 40.0% | |
| GCAGCATGAGAATTACTTCA+GGG | + | Chr3:76015503-76015522 | MsG0380015861.01.T01:CDS | 40.0% | |
| GGATGTCAAATCACAATGTG+GGG | - | Chr3:76015721-76015740 | None:intergenic | 40.0% | |
| GTACATGCTGAAAATGATGG+AGG | + | Chr3:76014225-76014244 | MsG0380015861.01.T01:CDS | 40.0% | |
| TCAATCCAACATTGGGATGA+TGG | + | Chr3:76014963-76014982 | MsG0380015861.01.T01:CDS | 40.0% | |
| TCATGAGGTTTCTTGTAAGG+CGG | - | Chr3:76014628-76014647 | None:intergenic | 40.0% | |
| TCCAAGTCCAGTTATATCGA+TGG | - | Chr3:76015340-76015359 | None:intergenic | 40.0% | |
| TCCATCGATATAACTGGACT+TGG | + | Chr3:76015336-76015355 | MsG0380015861.01.T01:CDS | 40.0% | |
| ! | AAGGCTCAAGGGTTTGTTTA+CGG | + | Chr3:76014253-76014272 | MsG0380015861.01.T01:CDS | 40.0% |
| ! | AATGGTGGAAGGATAAGGTT+AGG | + | Chr3:76014329-76014348 | MsG0380015861.01.T01:CDS | 40.0% |
| ! | ATCGGTTTACCGAAAGATCA+AGG | + | Chr3:76014598-76014617 | MsG0380015861.01.T01:CDS | 40.0% |
| ! | CCTTACAAGCTTGCGAATTT+TGG | - | Chr3:76014716-76014735 | None:intergenic | 40.0% |
| ! | GAAAATGATGGAGGTTTGCA+AGG | + | Chr3:76014234-76014253 | MsG0380015861.01.T01:CDS | 40.0% |
| ! | GGCTCTTCTTCATCTGATTT+TGG | + | Chr3:76015213-76015232 | MsG0380015861.01.T01:CDS | 40.0% |
| ! | TAAGATGTGATTTTCCGCTG+CGG | - | Chr3:76015460-76015479 | None:intergenic | 40.0% |
| !! | CGAATTTTGATGTGGAGGAA+CGG | + | Chr3:76014920-76014939 | MsG0380015861.01.T01:CDS | 40.0% |
| !! | CTTGCGAATTTTGGCAATGT+CGG | - | Chr3:76014707-76014726 | None:intergenic | 40.0% |
| !! | TCTTTCGGTAAACCGATTTG+GGG | - | Chr3:76014595-76014614 | None:intergenic | 40.0% |
| !! | TTGCGAATTTTGGCAATGTC+GGG | - | Chr3:76014706-76014725 | None:intergenic | 40.0% |
| AAAGGAGCAAGTCAAACCGA+AGG | + | Chr3:76014117-76014136 | MsG0380015861.01.T01:CDS | 45.0% | |
| AAGATGTCAAGGGCTCAAGA+TGG | + | Chr3:76014193-76014212 | MsG0380015861.01.T01:CDS | 45.0% | |
| AAGCTGACAATGCAATTCCG+GGG | + | Chr3:76014389-76014408 | MsG0380015861.01.T01:CDS | 45.0% | |
| AAGGGAGATATGCATGGAGT+AGG | + | Chr3:76015750-76015769 | MsG0380015861.01.T01:CDS | 45.0% | |
| AAGGTTAGGTTTGACCGCAA+CGG | + | Chr3:76014343-76014362 | MsG0380015861.01.T01:CDS | 45.0% | |
| AATGGCTCAGCCGGTTAATA+TGG | + | Chr3:76015305-76015324 | MsG0380015861.01.T01:CDS | 45.0% | |
| ACTTGGATTTCGTGAGGAAG+CGG | + | Chr3:76015052-76015071 | MsG0380015861.01.T01:CDS | 45.0% | |
| ATATTAACCGGCTGAGCCAT+TGG | - | Chr3:76015306-76015325 | None:intergenic | 45.0% | |
| CAAGCTGACAATGCAATTCC+GGG | + | Chr3:76014388-76014407 | MsG0380015861.01.T01:CDS | 45.0% | |
| CATGCCTTCTTCAGATCATG+AGG | - | Chr3:76014643-76014662 | None:intergenic | 45.0% | |
| CCAAGCTGACAATGCAATTC+CGG | + | Chr3:76014387-76014406 | MsG0380015861.01.T01:CDS | 45.0% | |
| CCACCTTCCATCGATATAAC+TGG | + | Chr3:76015330-76015349 | MsG0380015861.01.T01:CDS | 45.0% | |
| CCAGTTATATCGATGGAAGG+TGG | - | Chr3:76015333-76015352 | None:intergenic | 45.0% | |
| CCTTATAGCCAAGCTCACAT+CGG | + | Chr3:76015138-76015157 | MsG0380015861.01.T01:CDS | 45.0% | |
| CTCATGATCTGAAGAAGGCA+TGG | + | Chr3:76014641-76014660 | MsG0380015861.01.T01:CDS | 45.0% | |
| CTTCCTCACGAAATCCAAGT+TGG | - | Chr3:76015052-76015071 | None:intergenic | 45.0% | |
| GACTTTCGCAATGAAGGAAG+AGG | + | Chr3:76015020-76015039 | MsG0380015861.01.T01:CDS | 45.0% | |
| GAGAATTACTTCAGGGGTCA+AGG | + | Chr3:76015510-76015529 | MsG0380015861.01.T01:CDS | 45.0% | |
| GAGTTCAAGGGAGATATGCA+TGG | + | Chr3:76015744-76015763 | MsG0380015861.01.T01:CDS | 45.0% | |
| GATGGTGAGAAAAGGATTGG+TGG | + | Chr3:76015369-76015388 | MsG0380015861.01.T01:CDS | 45.0% | |
| GCTTGCAATCGTCAATCAAG+AGG | + | Chr3:76014786-76014805 | MsG0380015861.01.T01:CDS | 45.0% | |
| GGCAATGAGTATGATGTCGA+TGG | + | Chr3:76014883-76014902 | MsG0380015861.01.T01:CDS | 45.0% | |
| GGTAATATCCCCCTCAACTT+GGG | - | Chr3:76013984-76014003 | None:intergenic | 45.0% | |
| GGTGCTTCTCAAGCGATTAA+AGG | + | Chr3:76014099-76014118 | MsG0380015861.01.T01:CDS | 45.0% | |
| GTAATATCCCCCTCAACTTG+GGG | - | Chr3:76013983-76014002 | None:intergenic | 45.0% | |
| GTCAGCTTGGTACTTGGATA+TGG | - | Chr3:76014377-76014396 | None:intergenic | 45.0% | |
| GTGGGGACCCAAACATTAAA+TGG | - | Chr3:76015704-76015723 | None:intergenic | 45.0% | |
| TATGCATGGAGTAGGCATCA+TGG | + | Chr3:76015758-76015777 | MsG0380015861.01.T01:CDS | 45.0% | |
| TCAGCAGACTTTCGCAATGA+AGG | + | Chr3:76015014-76015033 | MsG0380015861.01.T01:CDS | 45.0% | |
| TCTCTCCATCATCCCAATGT+TGG | - | Chr3:76014971-76014990 | None:intergenic | 45.0% | |
| TGACCAACTTGGATTTCGTG+AGG | + | Chr3:76015046-76015065 | MsG0380015861.01.T01:CDS | 45.0% | |
| TGCAATCGTCAATCAAGAGG+AGG | + | Chr3:76014789-76014808 | MsG0380015861.01.T01:CDS | 45.0% | |
| TGCAGATAAGAGAGAACCCA+AGG | - | Chr3:76014479-76014498 | None:intergenic | 45.0% | |
| TGCATTGTCAGCTTGGTACT+TGG | - | Chr3:76014383-76014402 | None:intergenic | 45.0% | |
| TTACTTCAGGGGTCAAGGAA+TGG | + | Chr3:76015515-76015534 | MsG0380015861.01.T01:CDS | 45.0% | |
| TTCGGTTGAACGAATGACTG+AGG | - | Chr3:76015282-76015301 | None:intergenic | 45.0% | |
| TTGATTGACGATTGCAAGCC+AGG | - | Chr3:76014785-76014804 | None:intergenic | 45.0% | |
| TTGCCTTCATTGATGCCGAA+AGG | - | Chr3:76014868-76014887 | None:intergenic | 45.0% | |
| ! | AATGATGGAGGCAATCCGAT+CGG | + | Chr3:76014415-76014434 | MsG0380015861.01.T01:CDS | 45.0% |
| ! | AGGCTCAAGGGTTTGTTTAC+GGG | + | Chr3:76014254-76014273 | MsG0380015861.01.T01:CDS | 45.0% |
| ! | GATCATGAGATGGCTCTATC+TGG | + | Chr3:76013929-76013948 | MsG0380015861.01.T01:CDS | 45.0% |
| ! | GGACTTGGAGTTTCTGAAGA+TGG | + | Chr3:76015351-76015370 | MsG0380015861.01.T01:CDS | 45.0% |
| ! | TGATCTGAAGAAGGCATGGA+AGG | + | Chr3:76014645-76014664 | MsG0380015861.01.T01:CDS | 45.0% |
| ! | TTTTCCAGACAGGGCTTCTA+GGG | + | Chr3:76015161-76015180 | MsG0380015861.01.T01:CDS | 45.0% |
| !! | AGAGGAGCCGAATTTTGATG+TGG | + | Chr3:76014912-76014931 | MsG0380015861.01.T01:CDS | 45.0% |
| !!! | TCACATCGGTTTTCCAGACA+GGG | + | Chr3:76015152-76015171 | MsG0380015861.01.T01:CDS | 45.0% |
| AAAGGTCCAGCTGCGACAAA+TGG | - | Chr3:76014850-76014869 | None:intergenic | 50.0% | |
| AAGGTCCAGCTGCGACAAAT+GGG | - | Chr3:76014849-76014868 | None:intergenic | 50.0% | |
| AGAAAGGAAAGCCTGTGACC+GGG | + | Chr3:76014287-76014306 | MsG0380015861.01.T01:CDS | 50.0% | |
| AGGCGGTTTCCATTGGAGAA+GGG | + | Chr3:76014526-76014545 | MsG0380015861.01.T01:CDS | 50.0% | |
| ATGGAGGTTTGCAAGGCTCA+AGG | + | Chr3:76014241-76014260 | MsG0380015861.01.T01:CDS | 50.0% | |
| ATTCCGGGGAAGAATGATGG+AGG | + | Chr3:76014403-76014422 | MsG0380015861.01.T01:CDS | 50.0% | |
| CATCGGATAATCTCCGCGAA+TGG | + | Chr3:76014311-76014330 | MsG0380015861.01.T01:CDS | 50.0% | |
| CCGATGTGAGCTTGGCTATA+AGG | - | Chr3:76015141-76015160 | None:intergenic | 50.0% | |
| CCGGAATTGCATTGTCAGCT+TGG | - | Chr3:76014390-76014409 | None:intergenic | 50.0% | |
| CCTTATCCTTCCACCATTCG+CGG | - | Chr3:76014327-76014346 | None:intergenic | 50.0% | |
| CGGTAATATCCCCCTCAACT+TGG | - | Chr3:76013985-76014004 | None:intergenic | 50.0% | |
| CTGGAAAACCGATGTGAGCT+TGG | - | Chr3:76015149-76015168 | None:intergenic | 50.0% | |
| GAGAAAGGAAAGCCTGTGAC+CGG | + | Chr3:76014286-76014305 | MsG0380015861.01.T01:CDS | 50.0% | |
| GAGCAAGTCAAACCGAAGGA+AGG | + | Chr3:76014121-76014140 | MsG0380015861.01.T01:CDS | 50.0% | |
| GCAATTCCGGGGAAGAATGA+TGG | + | Chr3:76014400-76014419 | MsG0380015861.01.T01:CDS | 50.0% | |
| GGACCTTTCGGCATCAATGA+AGG | + | Chr3:76014862-76014881 | MsG0380015861.01.T01:CDS | 50.0% | |
| GGTCACAGGCTTTCCTTTCT+CGG | - | Chr3:76014287-76014306 | None:intergenic | 50.0% | |
| GTCACAGGCTTTCCTTTCTC+GGG | - | Chr3:76014286-76014305 | None:intergenic | 50.0% | |
| TACGGGATCATTCCCGAGAA+AGG | + | Chr3:76014271-76014290 | MsG0380015861.01.T01:CDS | 50.0% | |
| TGAGGTTTCTTGTAAGGCGG+AGG | - | Chr3:76014625-76014644 | None:intergenic | 50.0% | |
| TGGAGGTTTGCAAGGCTCAA+GGG | + | Chr3:76014242-76014261 | MsG0380015861.01.T01:CDS | 50.0% | |
| TGGTACTTGGATATGGCAGC+AGG | - | Chr3:76014370-76014389 | None:intergenic | 50.0% | |
| TTGATGTTGCCGAGCTTGAG+AGG | + | Chr3:76014059-76014078 | MsG0380015861.01.T01:CDS | 50.0% | |
| TTGCCTCCATCATTCTTCCC+CGG | - | Chr3:76014409-76014428 | None:intergenic | 50.0% | |
| TTTCCTCCTTGCCTGTTCCT+GGG | - | Chr3:76014173-76014192 | None:intergenic | 50.0% | |
| TTTGTCGCAGCTGGACCTTT+CGG | + | Chr3:76014850-76014869 | MsG0380015861.01.T01:CDS | 50.0% | |
| ! | CTGAAGAAGGCATGGAAGGT+TGG | + | Chr3:76014649-76014668 | MsG0380015861.01.T01:CDS | 50.0% |
| ! | GATGGCTCTATCTGGTGATC+TGG | + | Chr3:76013937-76013956 | MsG0380015861.01.T01:CDS | 50.0% |
| ! | GATTTTCCGCTGCGGTTAAG+TGG | - | Chr3:76015452-76015471 | None:intergenic | 50.0% |
| ! | GTTTTCCAGACAGGGCTTCT+AGG | + | Chr3:76015160-76015179 | MsG0380015861.01.T01:CDS | 50.0% |
| ! | TAATCTCCGCGAATGGTGGA+AGG | + | Chr3:76014318-76014337 | MsG0380015861.01.T01:CDS | 50.0% |
| ! | TGCTGAATGCTGCTAGCTTG+CGG | - | Chr3:76015483-76015502 | None:intergenic | 50.0% |
| ! | TTTTCCTCCTTGCCTGTTCC+TGG | - | Chr3:76014174-76014193 | None:intergenic | 50.0% |
| !! | GGAGCCGAATTTTGATGTGG+AGG | + | Chr3:76014915-76014934 | MsG0380015861.01.T01:CDS | 50.0% |
| !! | GGTCAAGGAATGGTGATGGA+AGG | + | Chr3:76015525-76015544 | MsG0380015861.01.T01:CDS | 50.0% |
| !!! | CTCACATCGGTTTTCCAGAC+AGG | + | Chr3:76015151-76015170 | MsG0380015861.01.T01:CDS | 50.0% |
| AACACTGTGATCCCCCTCAG+AGG | + | Chr3:76014506-76014525 | MsG0380015861.01.T01:CDS | 55.0% | |
| AATCCCAGGAACAGGCAAGG+AGG | + | Chr3:76014167-76014186 | MsG0380015861.01.T01:CDS | 55.0% | |
| ACCGAAACCAATGGCTCAGC+CGG | + | Chr3:76015296-76015315 | MsG0380015861.01.T01:CDS | 55.0% | |
| ACCGAAGGAAGGATCCGATG+TGG | + | Chr3:76014132-76014151 | MsG0380015861.01.T01:CDS | 55.0% | |
| AGAGCTGCAGGACACAACCT+TGG | + | Chr3:76014459-76014478 | MsG0380015861.01.T01:CDS | 55.0% | |
| AGCTTGAGAGGAGGATGTGG+AGG | + | Chr3:76014071-76014090 | MsG0380015861.01.T01:CDS | 55.0% | |
| AGGATAAAGCTCCCGCGCTA+AGG | - | Chr3:76014815-76014834 | None:intergenic | 55.0% | |
| AGGTCCAGCTGCGACAAATG+GGG | - | Chr3:76014848-76014867 | None:intergenic | 55.0% | |
| ATATGGCAGCAGGACCGTTG+CGG | - | Chr3:76014360-76014379 | None:intergenic | 55.0% | |
| ATCAAGAGGAGGCCTTAGCG+CGG | + | Chr3:76014800-76014819 | MsG0380015861.01.T01:CDS | 55.0% | |
| ATCCCCCTCAACTTGGGGTT+GGG | - | Chr3:76013978-76013997 | None:intergenic | 55.0% | |
| ATGTTGCCGAGCTTGAGAGG+AGG | + | Chr3:76014062-76014081 | MsG0380015861.01.T01:CDS | 55.0% | |
| CAATGGAAACCGCCTCTGAG+GGG | - | Chr3:76014521-76014540 | None:intergenic | 55.0% | |
| CACCACTCTTCCTTCCCTGT+AGG | - | Chr3:76014571-76014590 | None:intergenic | 55.0% | |
| CAGCTCTTGCAAGGTGTGAG+GGG | - | Chr3:76014446-76014465 | None:intergenic | 55.0% | |
| CAGGGGTCAAGGAATGGTGA+TGG | + | Chr3:76015521-76015540 | MsG0380015861.01.T01:CDS | 55.0% | |
| CCAATGGAAACCGCCTCTGA+GGG | - | Chr3:76014522-76014541 | None:intergenic | 55.0% | |
| CCACATCCTCCTCTCAAGCT+CGG | - | Chr3:76014071-76014090 | None:intergenic | 55.0% | |
| CGGATAATCTCCGCGAATGG+TGG | + | Chr3:76014314-76014333 | MsG0380015861.01.T01:CDS | 55.0% | |
| CTACAGGGAAGGAAGAGTGG+TGG | + | Chr3:76014569-76014588 | MsG0380015861.01.T01:CDS | 55.0% | |
| GAAAGGAAAGCCTGTGACCG+GGG | + | Chr3:76014288-76014307 | MsG0380015861.01.T01:CDS | 55.0% | |
| GAAGAGTGGTGGCCCCAAAT+CGG | + | Chr3:76014580-76014599 | MsG0380015861.01.T01:CDS | 55.0% | |
| GAGCTGCAGGACACAACCTT+GGG | + | Chr3:76014460-76014479 | MsG0380015861.01.T01:CDS | 55.0% | |
| GAGGAGGATGTGGAGGGATA+AGG | + | Chr3:76014078-76014097 | MsG0380015861.01.T01:CDS | 55.0% | |
| GAGGCGGTTTCCATTGGAGA+AGG | + | Chr3:76014525-76014544 | MsG0380015861.01.T01:CDS | 55.0% | |
| GCAGCTCTTGCAAGGTGTGA+GGG | - | Chr3:76014447-76014466 | None:intergenic | 55.0% | |
| GCCACATCGGATCCTTCCTT+CGG | - | Chr3:76014136-76014155 | None:intergenic | 55.0% | |
| GCTAACTGAACCTGAGGCGA+TGG | + | Chr3:76014009-76014028 | MsG0380015861.01.T01:CDS | 55.0% | |
| GCTTGAGAGGAGGATGTGGA+GGG | + | Chr3:76014072-76014091 | MsG0380015861.01.T01:CDS | 55.0% | |
| GGAAGAGGCTGTGACCAACT+TGG | + | Chr3:76015035-76015054 | MsG0380015861.01.T01:CDS | 55.0% | |
| GGAGGAACACCCTTCTCCAA+TGG | - | Chr3:76014538-76014557 | None:intergenic | 55.0% | |
| GGCGGAGGACCTTGATCTTT+CGG | - | Chr3:76014610-76014629 | None:intergenic | 55.0% | |
| GTATCCCTAGAAGCCCTGTC+TGG | - | Chr3:76015168-76015187 | None:intergenic | 55.0% | |
| GTGAGGAAGCGGAAGATCTC+TGG | + | Chr3:76015063-76015082 | MsG0380015861.01.T01:CDS | 55.0% | |
| TATCCCCCTCAACTTGGGGT+TGG | - | Chr3:76013979-76013998 | None:intergenic | 55.0% | |
| TCACACCTTGCAAGAGCTGC+AGG | + | Chr3:76014447-76014466 | MsG0380015861.01.T01:CDS | 55.0% | |
| TCCAATGGAAACCGCCTCTG+AGG | - | Chr3:76014523-76014542 | None:intergenic | 55.0% | |
| TCGCCTCAGGTTCAGTTAGC+CGG | - | Chr3:76014009-76014028 | None:intergenic | 55.0% | |
| TCTTCGTCAACCATCGCCTC+AGG | - | Chr3:76014022-76014041 | None:intergenic | 55.0% | |
| TCTTGCAAGGTGTGAGGGGT+TGG | - | Chr3:76014442-76014461 | None:intergenic | 55.0% | |
| TGATGTCGATGGGGGAGAAG+AGG | + | Chr3:76014894-76014913 | MsG0380015861.01.T01:CDS | 55.0% | |
| TGCAGCTCTTGCAAGGTGTG+AGG | - | Chr3:76014448-76014467 | None:intergenic | 55.0% | |
| TGTGTCCTGCAGCTCTTGCA+AGG | - | Chr3:76014455-76014474 | None:intergenic | 55.0% | |
| TTCCTGGGATTGCCTCTGCT+TGG | - | Chr3:76014158-76014177 | None:intergenic | 55.0% | |
| TTGAGGGGGATATTACCGCC+CGG | + | Chr3:76013987-76014006 | MsG0380015861.01.T01:CDS | 55.0% | |
| TTGCCTCTGCTTGGCCACAT+CGG | - | Chr3:76014149-76014168 | None:intergenic | 55.0% | |
| ! | AATGGAAACCGCCTCTGAGG+GGG | - | Chr3:76014520-76014539 | None:intergenic | 55.0% |
| ! | CCGCGAATGGTGGAAGGATA+AGG | + | Chr3:76014324-76014343 | MsG0380015861.01.T01:CDS | 55.0% |
| ! | CGGCTAAGGAAAGTGCAACC+TGG | + | Chr3:76014764-76014783 | MsG0380015861.01.T01:CDS | 55.0% |
| !! | ACCGGCTGAGCCATTGGTTT+CGG | - | Chr3:76015300-76015319 | None:intergenic | 55.0% |
| !! | AGAAGGGTGTTCCTCCTCCA+TGG | + | Chr3:76014542-76014561 | MsG0380015861.01.T01:CDS | 55.0% |
| AAAGCCTGTGACCGGGGCAT+CGG | + | Chr3:76014294-76014313 | MsG0380015861.01.T01:CDS | 60.0% | |
| ACTGTGATCCCCCTCAGAGG+CGG | + | Chr3:76014509-76014528 | MsG0380015861.01.T01:CDS | 60.0% | |
| ATCCCCCCATTTGTCGCAGC+TGG | + | Chr3:76014841-76014860 | MsG0380015861.01.T01:CDS | 60.0% | |
| CCCTCAGAGGCGGTTTCCAT+TGG | + | Chr3:76014519-76014538 | MsG0380015861.01.T01:CDS | 60.0% | |
| CCGAGCTTGAGAGGAGGATG+TGG | + | Chr3:76014068-76014087 | MsG0380015861.01.T01:CDS | 60.0% | |
| CGCCTCAGGTTCAGTTAGCC+GGG | - | Chr3:76014008-76014027 | None:intergenic | 60.0% | |
| CTCAGGTTCAGTTAGCCGGG+CGG | - | Chr3:76014005-76014024 | None:intergenic | 60.0% | |
| CTCCTCCATGGTGGCCTACA+GGG | + | Chr3:76014554-76014573 | MsG0380015861.01.T01:CDS | 60.0% | |
| GATCCGATGTGGCCAAGCAG+AGG | + | Chr3:76014143-76014162 | MsG0380015861.01.T01:CDS | 60.0% | |
| GCAGAGGCAATCCCAGGAAC+AGG | + | Chr3:76014159-76014178 | MsG0380015861.01.T01:CDS | 60.0% | |
| GCGGAGATTATCCGATGCCC+CGG | - | Chr3:76014308-76014327 | None:intergenic | 60.0% | |
| GGCAATCCCAGGAACAGGCA+AGG | + | Chr3:76014164-76014183 | MsG0380015861.01.T01:CDS | 60.0% | |
| GGCCTACAGGGAAGGAAGAG+TGG | + | Chr3:76014566-76014585 | MsG0380015861.01.T01:CDS | 60.0% | |
| GGTCCAGCTGCGACAAATGG+GGG | - | Chr3:76014847-76014866 | None:intergenic | 60.0% | |
| GTCCAGCTGCGACAAATGGG+GGG | - | Chr3:76014846-76014865 | None:intergenic | 60.0% | |
| GTGTGAGGGGTTGGACCGAT+CGG | - | Chr3:76014433-76014452 | None:intergenic | 60.0% | |
| TCAAGAGGAGGCCTTAGCGC+GGG | + | Chr3:76014801-76014820 | MsG0380015861.01.T01:CDS | 60.0% | |
| TCCATGGTGGCCTACAGGGA+AGG | + | Chr3:76014558-76014577 | MsG0380015861.01.T01:CDS | 60.0% | |
| TCCCCCTCAACTTGGGGTTG+GGG | - | Chr3:76013977-76013996 | None:intergenic | 60.0% | |
| TCCTTCCCTGTAGGCCACCA+TGG | - | Chr3:76014562-76014581 | None:intergenic | 60.0% | |
| TGCTCCCCAACCCCAAGTTG+AGG | + | Chr3:76013970-76013989 | MsG0380015861.01.T01:CDS | 60.0% | |
| TGGCAGCCACTTAACCGCAG+CGG | + | Chr3:76015443-76015462 | MsG0380015861.01.T01:CDS | 60.0% | |
| TTATCCGATGCCCCGGTCAC+AGG | - | Chr3:76014301-76014320 | None:intergenic | 60.0% | |
| TTCCCTGTAGGCCACCATGG+AGG | - | Chr3:76014559-76014578 | None:intergenic | 60.0% | |
| ! | AGGGTGTTCCTCCTCCATGG+TGG | + | Chr3:76014545-76014564 | MsG0380015861.01.T01:CDS | 60.0% |
| ! | CTCCCCAACCCCAAGTTGAG+GGG | + | Chr3:76013972-76013991 | MsG0380015861.01.T01:CDS | 60.0% |
| ! | GCTCCCCAACCCCAAGTTGA+GGG | + | Chr3:76013971-76013990 | MsG0380015861.01.T01:CDS | 60.0% |
| ! | TCCCCAACCCCAAGTTGAGG+GGG | + | Chr3:76013973-76013992 | MsG0380015861.01.T01:CDS | 60.0% |
| CCTCCTCCATGGTGGCCTAC+AGG | + | Chr3:76014553-76014572 | MsG0380015861.01.T01:CDS | 65.0% | |
| CCTGTAGGCCACCATGGAGG+AGG | - | Chr3:76014556-76014575 | None:intergenic | 65.0% | |
| CGCCCGGCTAACTGAACCTG+AGG | + | Chr3:76014003-76014022 | MsG0380015861.01.T01:CDS | 65.0% | |
| GGCCAAGCAGAGGCAATCCC+AGG | + | Chr3:76014153-76014172 | MsG0380015861.01.T01:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr3 | gene | 76013914 | 76015830 | 76013914 | ID=MsG0380015861.01;Name=MsG0380015861.01 |
| Chr3 | mRNA | 76013914 | 76015830 | 76013914 | ID=MsG0380015861.01.T01;Parent=MsG0380015861.01;Name=MsG0380015861.01.T01;_AED=0.41;_eAED=0.41;_QI=0|-1|0|1|-1|1|1|0|638 |
| Chr3 | exon | 76013914 | 76015830 | 76013914 | ID=MsG0380015861.01.T01:exon:1184;Parent=MsG0380015861.01.T01 |
| Chr3 | CDS | 76013914 | 76015830 | 76013914 | ID=MsG0380015861.01.T01:cds;Parent=MsG0380015861.01.T01 |
| Gene Sequence |
| Protein sequence |
