AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0380016450.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380016450.01.T01 MTR_3g089045 96.587 293 9 1 1 293 1 292 0.0 590
MsG0380016450.01.T01 MTR_4g082040 42.857 329 139 10 11 291 100 427 3.16e-68 218
MsG0380016450.01.T01 MTR_5g041570 77.600 125 27 1 11 134 129 253 1.68e-65 211
MsG0380016450.01.T01 MTR_6g074860 59.302 172 66 3 14 181 2 173 2.36e-65 205
MsG0380016450.01.T01 MTR_7g086960 40.909 308 145 6 1 293 71 356 7.68e-62 199
MsG0380016450.01.T01 MTR_6g027370 42.215 289 122 10 10 289 93 345 5.81e-54 179
MsG0380016450.01.T01 MTR_6g027340 51.333 150 70 1 16 165 16 162 5.28e-49 162
MsG0380016450.01.T01 MTR_6g027360 51.678 149 69 1 16 164 78 223 2.76e-48 163
MsG0380016450.01.T01 MTR_4g019370 62.376 101 38 0 16 116 38 138 2.68e-42 149
MsG0380016450.01.T01 MTR_5g016510 56.436 101 44 0 16 116 5 105 2.06e-37 135
MsG0380016450.01.T01 MTR_3g101290 57.426 101 43 0 16 116 37 137 4.29e-37 132
MsG0380016450.01.T01 MTR_5g082910 51.402 107 52 0 4 110 7 113 1.03e-35 130
MsG0380016450.01.T01 MTR_4g094982 55.446 101 45 0 16 116 5 105 1.18e-35 129
MsG0380016450.01.T01 MTR_6g015455 51.695 118 50 1 16 133 5 115 3.80e-35 134
MsG0380016450.01.T01 MTR_7g061330 53.465 101 47 0 16 116 113 213 7.23e-32 124
MsG0380016450.01.T01 MTR_7g461410 53.465 101 47 0 16 116 113 213 7.23e-32 124
MsG0380016450.01.T01 MTR_7g061330 53.465 101 47 0 16 116 77 177 1.43e-31 123
MsG0380016450.01.T01 MTR_3g463400 50.435 115 54 1 13 127 130 241 1.66e-31 122
MsG0380016450.01.T01 MTR_5g070020 39.759 166 86 2 6 165 112 269 3.63e-31 119
MsG0380016450.01.T01 MTR_5g049190 52.336 107 48 1 16 122 19 122 3.93e-31 117
MsG0380016450.01.T01 MTR_3g110028 49.505 101 51 0 16 116 85 185 1.67e-30 121
MsG0380016450.01.T01 MTR_4g105660 31.734 271 157 7 16 286 180 422 1.96e-30 119
MsG0380016450.01.T01 MTR_1g026870 49.505 101 51 0 16 116 85 185 2.71e-30 120
MsG0380016450.01.T01 MTR_7g037260 48.673 113 57 1 16 128 145 256 9.66e-29 113
MsG0380016450.01.T01 MTR_7g451170 48.673 113 57 1 16 128 191 302 1.33e-28 113
MsG0380016450.01.T01 MTR_3g077650 47.368 114 57 1 16 129 181 291 2.04e-27 110
MsG0380016450.01.T01 MTR_1g100667 43.590 117 63 2 16 130 15 130 2.95e-27 107
MsG0380016450.01.T01 MTR_5g010650 52.174 92 44 0 19 110 113 204 8.38e-27 109
MsG0380016450.01.T01 MTR_6g055910 38.346 133 79 2 16 146 16 147 1.11e-26 106
MsG0380016450.01.T01 MTR_0008s0390 49.515 103 49 2 16 116 15 116 1.34e-26 105
MsG0380016450.01.T01 MTR_4g100720 36.879 141 75 2 16 142 15 155 1.49e-26 102
MsG0380016450.01.T01 MTR_2g067420 50.485 103 48 2 10 110 10 111 1.64e-26 106
MsG0380016450.01.T01 MTR_4g088015 47.664 107 53 1 16 122 221 324 2.12e-26 107
MsG0380016450.01.T01 MTR_2g089450 35.870 184 112 3 10 188 8 190 3.64e-26 103
MsG0380016450.01.T01 MTR_0008s0470 40.268 149 76 4 16 152 15 162 4.05e-26 104
MsG0380016450.01.T01 MTR_2g064160 49.515 103 49 2 16 116 13 114 5.32e-26 104
MsG0380016450.01.T01 MTR_8g017440 42.222 135 68 3 16 148 14 140 5.36e-26 105
MsG0380016450.01.T01 MTR_1g076150 43.966 116 62 2 16 129 14 128 6.71e-26 103
MsG0380016450.01.T01 MTR_3g074520 46.789 109 55 2 10 116 8 115 7.74e-26 105
MsG0380016450.01.T01 MTR_0251s0050 48.544 103 50 2 16 116 15 116 1.11e-25 103
MsG0380016450.01.T01 MTR_7g037130 50.000 96 48 0 16 111 145 240 1.36e-25 104
MsG0380016450.01.T01 MTR_3g461490 47.573 103 51 2 16 116 14 115 1.51e-25 103
MsG0380016450.01.T01 MTR_7g035350 50.000 92 46 0 19 110 228 319 1.81e-25 105
MsG0380016450.01.T01 MTR_5g042030 45.098 102 55 1 16 116 9 110 1.82e-25 102
MsG0380016450.01.T01 MTR_8g060940 45.794 107 57 1 9 114 2 108 2.69e-25 101
MsG0380016450.01.T01 MTR_7g115650 46.078 102 54 1 16 116 14 115 2.97e-25 100
MsG0380016450.01.T01 MTR_0008s0280 44.660 103 54 2 10 110 8 109 3.41e-25 100
MsG0380016450.01.T01 MTR_4g105130 43.925 107 57 2 16 120 14 119 3.96e-25 103
MsG0380016450.01.T01 MTR_7g110830 44.860 107 56 2 16 120 14 119 4.73e-25 103
MsG0380016450.01.T01 MTR_2g089420 44.037 109 58 2 10 116 7 114 6.23e-25 103
MsG0380016450.01.T01 MTR_8g098860 46.729 107 54 2 16 120 14 119 8.55e-25 101
MsG0380016450.01.T01 MTR_5g010020 52.083 96 43 2 16 109 14 108 1.15e-24 101
MsG0380016450.01.T01 MTR_5g062790 44.915 118 55 5 4 118 2 112 1.69e-24 100
MsG0380016450.01.T01 MTR_8g017540 42.975 121 66 2 16 134 60 179 1.80e-24 102
MsG0380016450.01.T01 MTR_5g079220 41.667 108 62 1 11 117 18 125 1.99e-24 99.8
MsG0380016450.01.T01 MTR_3g052450 42.342 111 63 1 10 119 36 146 2.00e-24 103
MsG0380016450.01.T01 MTR_1g085640 43.925 107 57 2 16 120 14 119 2.08e-24 101
MsG0380016450.01.T01 MTR_1g085040 43.396 106 57 2 16 119 14 118 2.60e-24 101
MsG0380016450.01.T01 MTR_1g100653 45.283 106 55 2 16 119 14 118 3.25e-24 99.8
MsG0380016450.01.T01 MTR_3g077110 44.860 107 56 2 16 120 14 119 3.30e-24 100
MsG0380016450.01.T01 MTR_0063s0090 39.844 128 65 4 10 134 8 126 3.38e-24 98.2
MsG0380016450.01.T01 MTR_1g021230 43.307 127 64 3 16 140 59 179 3.71e-24 101
MsG0380016450.01.T01 MTR_5g079670 45.872 109 56 2 10 116 7 114 4.31e-24 97.4
MsG0380016450.01.T01 MTR_5g029840 43.519 108 60 1 10 116 8 115 4.44e-24 100
MsG0380016450.01.T01 MTR_1g112760 43.925 107 57 2 16 120 15 120 4.69e-24 97.8
MsG0380016450.01.T01 MTR_1g043080 44.860 107 56 2 12 116 10 115 6.78e-24 97.8
MsG0380016450.01.T01 MTR_3g052430 43.810 105 58 1 16 119 43 147 7.36e-24 101
MsG0380016450.01.T01 MTR_8g095390 45.098 102 55 1 16 116 14 115 7.70e-24 99.0
MsG0380016450.01.T01 MTR_2g099740 48.544 103 50 2 16 116 14 115 7.99e-24 100
MsG0380016450.01.T01 MTR_8g017500 38.000 150 83 3 16 163 14 155 9.65e-24 99.4
MsG0380016450.01.T01 MTR_5g078910 42.202 109 62 1 9 116 2 110 9.69e-24 98.6
MsG0380016450.01.T01 MTR_5g078800 41.284 109 63 1 9 116 2 110 1.08e-23 97.8
MsG0380016450.01.T01 MTR_5g078860 42.202 109 62 1 9 116 2 110 1.22e-23 98.2
MsG0380016450.01.T01 MTR_7g076740 36.970 165 87 5 10 171 8 158 1.39e-23 98.2
MsG0380016450.01.T01 MTR_5g079290 40.909 110 64 1 9 117 12 121 1.40e-23 97.4
MsG0380016450.01.T01 MTR_5g007370 42.478 113 62 2 6 116 4 115 1.42e-23 98.2
MsG0380016450.01.T01 MTR_4g073420 46.602 103 52 2 16 116 14 115 1.48e-23 97.8
MsG0380016450.01.T01 MTR_8g017390 35.025 197 104 6 16 188 14 210 1.66e-23 100
MsG0380016450.01.T01 MTR_7g017260 40.541 111 63 1 9 116 20 130 1.84e-23 97.4
MsG0380016450.01.T01 MTR_3g097450 45.631 103 53 2 16 116 14 115 2.15e-23 97.4
MsG0380016450.01.T01 MTR_4g063100 47.706 109 53 3 16 122 9 115 2.48e-23 96.3
MsG0380016450.01.T01 MTR_7g111290 47.423 97 48 2 16 110 14 109 2.67e-23 98.6
MsG0380016450.01.T01 MTR_8g027345 40.909 110 64 1 16 124 14 123 2.91e-23 97.1
MsG0380016450.01.T01 MTR_2g011660 42.105 114 63 2 5 116 4 116 2.92e-23 97.8
MsG0380016450.01.T01 MTR_8g042410 41.129 124 70 2 16 137 39 161 3.04e-23 99.8
MsG0380016450.01.T01 MTR_5g088610 41.406 128 65 5 4 129 2 121 3.14e-23 98.2
MsG0380016450.01.T01 MTR_1g057980 40.708 113 65 1 16 128 80 190 4.24e-23 96.7
MsG0380016450.01.T01 MTR_0001s0360 42.157 102 58 1 16 116 9 110 4.79e-23 95.5
MsG0380016450.01.T01 MTR_4g478180 44.037 109 58 2 10 116 9 116 4.96e-23 97.4
MsG0380016450.01.T01 MTR_5g078950 41.748 103 59 1 9 110 2 104 5.53e-23 95.9
MsG0380016450.01.T01 MTR_6g009430 42.593 108 61 1 10 116 8 115 5.85e-23 97.1
MsG0380016450.01.T01 MTR_7g450950 44.444 99 55 0 11 109 152 250 6.31e-23 97.1
MsG0380016450.01.T01 MTR_5g014990 40.833 120 63 3 10 127 8 121 6.33e-23 96.3
MsG0380016450.01.T01 MTR_8g017340 48.544 103 51 1 16 116 14 116 6.64e-23 98.6
MsG0380016450.01.T01 MTR_1g062940 42.520 127 68 4 16 138 8 133 7.34e-23 94.4
MsG0380016450.01.T01 MTR_4g091490 43.750 112 60 2 7 116 6 116 8.77e-23 97.1
MsG0380016450.01.T01 MTR_3g103570 40.367 109 63 2 10 116 8 116 8.83e-23 96.7
MsG0380016450.01.T01 MTR_4g065017 42.593 108 59 2 16 121 19 125 8.98e-23 96.3
MsG0380016450.01.T01 MTR_1g083630 39.669 121 68 2 4 123 2 118 9.01e-23 98.6
MsG0380016450.01.T01 MTR_8g031360 47.115 104 51 3 16 116 15 117 1.15e-22 95.5
MsG0380016450.01.T01 MTR_7g117730 40.367 109 64 1 16 123 14 122 1.61e-22 94.4
MsG0380016450.01.T01 MTR_4g057635 42.202 109 61 2 10 116 8 116 2.07e-22 95.1
MsG0380016450.01.T01 MTR_4g097570 37.984 129 73 3 10 131 8 136 2.87e-22 94.4
MsG0380016450.01.T01 MTR_8g006470 47.619 105 53 2 7 109 3 107 3.80e-22 94.0
MsG0380016450.01.T01 MTR_1g017140 40.367 109 63 2 10 116 8 116 3.94e-22 94.7
MsG0380016450.01.T01 MTR_5g088080 42.342 111 56 4 10 118 11 115 4.30e-22 93.2
MsG0380016450.01.T01 MTR_5g088150 42.342 111 56 4 10 118 11 115 4.30e-22 93.2
MsG0380016450.01.T01 MTR_5g488210 42.342 111 56 4 10 118 11 115 4.30e-22 93.2
MsG0380016450.01.T01 MTR_3g083540 42.157 102 58 1 16 116 43 144 4.50e-22 94.0
MsG0380016450.01.T01 MTR_5g088640 42.342 111 56 4 10 118 11 115 4.82e-22 93.6
MsG0380016450.01.T01 MTR_5g488170 42.342 111 56 4 10 118 11 115 5.28e-22 92.8
MsG0380016450.01.T01 MTR_1g086530 40.870 115 65 2 7 119 26 139 5.62e-22 93.2
MsG0380016450.01.T01 MTR_7g010210 39.640 111 66 1 10 119 8 118 5.68e-22 94.0
MsG0380016450.01.T01 MTR_8g020490 40.000 110 65 1 12 120 6 115 5.76e-22 92.8
MsG0380016450.01.T01 MTR_2g097910 41.121 107 62 1 16 121 22 128 6.53e-22 94.0
MsG0380016450.01.T01 MTR_7g096930 43.137 102 57 1 16 116 14 115 6.81e-22 93.2
MsG0380016450.01.T01 MTR_8g017350 47.573 103 52 1 16 116 14 116 7.07e-22 95.9
MsG0380016450.01.T01 MTR_4g125520 39.048 105 63 1 16 119 14 118 7.37e-22 93.6
MsG0380016450.01.T01 MTR_1g043050 42.056 107 59 2 12 116 10 115 7.74e-22 92.4
MsG0380016450.01.T01 MTR_0197s0010 45.000 100 52 2 19 116 6 104 9.00e-22 91.7
MsG0380016450.01.T01 MTR_7g010210 39.640 111 66 1 10 119 8 118 9.36e-22 92.4
MsG0380016450.01.T01 MTR_3g028740 44.762 105 55 2 16 118 24 127 1.73e-21 93.2
MsG0380016450.01.T01 MTR_3g011610 43.810 105 56 2 16 118 39 142 1.79e-21 94.4
MsG0380016450.01.T01 MTR_2g096380 38.255 149 81 5 16 162 8 147 1.99e-21 90.9
MsG0380016450.01.T01 MTR_1g110460 39.130 115 69 1 16 129 28 142 2.09e-21 92.4
MsG0380016450.01.T01 MTR_4g097570 37.500 128 74 3 10 131 8 135 2.50e-21 91.7
MsG0380016450.01.T01 MTR_1g073170 42.857 105 57 2 16 118 22 125 2.84e-21 90.9
MsG0380016450.01.T01 MTR_4g485530 42.157 102 58 1 16 116 14 115 3.10e-21 89.4
MsG0380016450.01.T01 MTR_2g095520 41.346 104 59 2 10 111 8 111 3.39e-21 92.0
MsG0380016450.01.T01 MTR_1g017000 41.284 109 62 2 10 116 8 116 3.81e-21 90.5
MsG0380016450.01.T01 MTR_2g089620 42.202 109 60 2 10 116 8 115 4.26e-21 91.7
MsG0380016450.01.T01 MTR_0247s0040 42.574 101 57 1 10 109 3 103 5.41e-21 88.2
MsG0380016450.01.T01 MTR_5g079120 38.596 114 69 1 9 121 56 169 8.11e-21 90.5
MsG0380016450.01.T01 MTR_6g090405 42.202 109 61 2 10 116 8 116 8.46e-21 89.7
MsG0380016450.01.T01 MTR_6g055910 39.048 105 63 1 42 146 15 118 8.83e-21 89.4
MsG0380016450.01.T01 MTR_1g045610 44.762 105 55 2 16 118 23 126 1.03e-20 89.4
MsG0380016450.01.T01 MTR_7g102110 38.532 109 65 2 10 116 8 116 1.14e-20 89.7
MsG0380016450.01.T01 MTR_6g012690 39.450 109 63 2 10 116 8 115 1.30e-20 90.9
MsG0380016450.01.T01 MTR_4g082230 39.216 102 61 1 16 116 14 115 1.35e-20 91.3
MsG0380016450.01.T01 MTR_0140s0030 43.137 102 57 1 16 116 15 116 1.49e-20 90.5
MsG0380016450.01.T01 MTR_0489s0020 43.137 102 57 1 16 116 15 116 1.49e-20 90.5
MsG0380016450.01.T01 MTR_2g088170 45.378 119 61 3 3 118 17 134 1.60e-20 91.3
MsG0380016450.01.T01 MTR_4g082290 41.748 103 57 2 16 116 14 115 1.92e-20 90.9
MsG0380016450.01.T01 MTR_7g011170 41.176 102 59 1 16 116 14 115 2.10e-20 89.4
MsG0380016450.01.T01 MTR_4g121460 38.333 120 68 2 16 134 14 128 2.59e-20 89.7
MsG0380016450.01.T01 MTR_4g128670 41.346 104 59 2 10 111 8 111 3.66e-20 89.4
MsG0380016450.01.T01 MTR_5g078930 40.952 105 61 1 19 122 14 118 4.52e-20 86.7
MsG0380016450.01.T01 MTR_6g012180 39.806 103 61 1 10 111 8 110 5.84e-20 88.6
MsG0380016450.01.T01 MTR_1g086510 34.328 134 87 1 1 133 8 141 7.08e-20 87.4
MsG0380016450.01.T01 MTR_7g035075 40.323 124 68 3 2 122 5 125 1.13e-19 85.5
MsG0380016450.01.T01 MTR_4g029540 45.714 105 55 2 16 118 12 116 1.18e-19 87.4
MsG0380016450.01.T01 MTR_4g102380 42.202 109 60 2 10 116 8 115 1.51e-19 86.7
MsG0380016450.01.T01 MTR_7g087130 41.176 102 59 1 16 116 14 115 2.29e-19 87.0
MsG0380016450.01.T01 MTR_0193s0090 37.190 121 68 2 10 122 3 123 3.60e-19 84.0
MsG0380016450.01.T01 MTR_3g039990 39.048 105 63 1 16 119 15 119 4.27e-19 85.9
MsG0380016450.01.T01 MTR_3g045430 39.474 114 66 3 5 116 4 116 4.37e-19 85.5
MsG0380016450.01.T01 MTR_3g065440 39.823 113 65 2 10 120 8 119 5.98e-19 85.5
MsG0380016450.01.T01 MTR_2g034790 39.216 102 61 1 16 116 14 115 1.27e-18 84.7
MsG0380016450.01.T01 MTR_5g078140 40.179 112 64 2 10 119 8 118 1.89e-18 84.3
MsG0380016450.01.T01 MTR_6g006030 39.496 119 68 3 16 132 16 132 2.27e-18 82.0
MsG0380016450.01.T01 MTR_7g061550 40.187 107 61 1 16 119 7 113 2.41e-18 84.3
MsG0380016450.01.T01 MTR_4g063100 52.703 74 34 1 49 122 14 86 5.38e-18 81.3
MsG0380016450.01.T01 MTR_2g033170 34.646 127 82 1 8 133 18 144 3.52e-17 80.9
MsG0380016450.01.T01 MTR_4g123040 34.884 129 83 1 6 133 16 144 3.80e-17 80.5
MsG0380016450.01.T01 MTR_5g038910 34.921 126 69 2 19 144 29 141 4.97e-17 80.9
MsG0380016450.01.T01 MTR_8g468380 35.714 98 63 0 19 116 25 122 5.99e-17 80.9
MsG0380016450.01.T01 MTR_5g038910 34.921 126 69 2 19 144 29 141 6.67e-17 80.9
MsG0380016450.01.T01 MTR_2g096380 38.596 114 62 3 49 162 23 128 1.99e-16 76.6
MsG0380016450.01.T01 MTR_7g109320 43.137 102 57 1 16 116 14 115 3.22e-16 78.2
MsG0380016450.01.T01 MTR_7g111290 51.613 62 30 0 49 110 6 67 5.05e-16 77.4
MsG0380016450.01.T01 MTR_4g128190 35.833 120 61 4 5 123 2 106 9.30e-16 75.5
MsG0380016450.01.T01 MTR_1g008970 47.692 65 34 0 42 106 117 181 4.08e-15 73.9
MsG0380016450.01.T01 MTR_1g085880 38.136 118 67 4 6 120 3 117 1.15e-13 68.6
MsG0380016450.01.T01 MTR_1g085770 38.136 118 67 4 6 120 3 117 3.02e-13 69.3
MsG0380016450.01.T01 MTR_5g007300 41.333 75 43 1 16 89 66 140 1.17e-12 64.7
MsG0380016450.01.T01 MTR_6g080360 35.870 92 58 1 18 109 481 571 2.61e-12 67.8
MsG0380016450.01.T01 MTR_6g080360 33.333 120 69 3 14 123 526 644 3.29e-11 64.3
MsG0380016450.01.T01 MTR_6g080360 36.264 91 57 1 19 109 262 351 4.18e-12 67.0
MsG0380016450.01.T01 MTR_6g080360 33.333 120 69 3 14 123 306 424 6.93e-11 63.2
MsG0380016450.01.T01 MTR_7g115550 34.021 97 63 1 17 113 8 103 1.28e-11 65.5
MsG0380016450.01.T01 MTR_7g115550 38.824 85 51 1 17 101 8 91 1.31e-11 65.5
MsG0380016450.01.T01 MTR_0023s0210 33.735 83 54 1 8 89 1 83 3.91e-11 58.5
MsG0380016450.01.T01 MTR_6g055910 32.895 76 51 0 71 146 2 77 4.72e-11 61.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380016450.01.T01 AT1G17950 43.299 291 106 5 14 293 3 245 1.20e-67 211
MsG0380016450.01.T01 AT1G69560 84.404 109 17 0 13 121 104 212 5.42e-64 204
MsG0380016450.01.T01 AT1G69560 84.404 109 17 0 13 121 120 228 7.12e-64 204
MsG0380016450.01.T01 AT1G73410 85.321 109 16 0 14 122 4 112 3.93e-63 199
MsG0380016450.01.T01 AT4G33450 41.311 305 109 7 1 292 3 250 4.98e-63 199
MsG0380016450.01.T01 AT1G73410 85.321 109 16 0 14 122 4 112 9.62e-63 197
MsG0380016450.01.T01 AT1G26780 78.947 114 24 0 16 129 98 211 1.83e-62 199
MsG0380016450.01.T01 AT1G26780 78.947 114 24 0 16 129 98 211 8.17e-62 200
MsG0380016450.01.T01 AT5G17800 76.991 113 26 0 10 122 87 199 1.26e-60 196
MsG0380016450.01.T01 AT3G29020 72.973 111 30 0 11 121 60 170 4.20e-58 186
MsG0380016450.01.T01 AT3G29020 72.973 111 30 0 11 121 62 172 2.98e-57 186
MsG0380016450.01.T01 AT5G39700 58.407 113 47 0 9 121 49 161 5.46e-41 140
MsG0380016450.01.T01 AT2G39880 52.941 119 56 0 5 123 39 157 8.38e-38 137
MsG0380016450.01.T01 AT5G67300 59.406 101 41 0 16 116 6 106 8.77e-38 136
MsG0380016450.01.T01 AT3G50060 57.426 101 43 0 16 116 6 106 2.72e-37 134
MsG0380016450.01.T01 AT3G09230 57.426 101 43 0 16 116 55 155 1.09e-36 135
MsG0380016450.01.T01 AT3G55730 55.446 101 45 0 16 116 56 156 4.80e-36 133
MsG0380016450.01.T01 AT4G37260 50.459 109 54 0 16 124 13 121 9.23e-35 128
MsG0380016450.01.T01 AT2G23290 54.455 101 46 0 16 116 13 113 1.49e-34 127
MsG0380016450.01.T01 AT3G09370 44.512 164 75 3 16 179 135 282 1.87e-33 128
MsG0380016450.01.T01 AT3G09370 44.512 164 75 3 16 179 130 277 2.05e-33 128
MsG0380016450.01.T01 AT3G09370 43.195 169 80 3 16 184 143 295 3.26e-33 127
MsG0380016450.01.T01 AT5G11510 49.505 101 51 0 16 116 81 181 8.67e-31 122
MsG0380016450.01.T01 AT5G11510 49.505 101 51 0 16 116 81 181 8.67e-31 122
MsG0380016450.01.T01 AT5G11510 49.505 101 51 0 16 116 81 181 8.67e-31 122
MsG0380016450.01.T01 AT5G11510 49.505 101 51 0 16 116 81 181 1.09e-30 121
MsG0380016450.01.T01 AT5G11510 49.505 101 51 0 16 116 81 181 1.15e-30 121
MsG0380016450.01.T01 AT5G58850 47.581 124 62 1 4 127 93 213 2.32e-30 119
MsG0380016450.01.T01 AT5G11050 49.606 127 60 2 12 138 101 223 3.16e-30 118
MsG0380016450.01.T01 AT5G02320 50.495 101 50 0 16 116 127 227 3.53e-30 119
MsG0380016450.01.T01 AT5G02320 50.495 101 50 0 16 116 127 227 3.53e-30 119
MsG0380016450.01.T01 AT5G02320 50.495 101 50 0 16 116 67 167 3.94e-30 119
MsG0380016450.01.T01 AT3G27785 38.462 156 92 2 13 168 186 337 1.09e-29 117
MsG0380016450.01.T01 AT5G40360 46.729 107 57 0 16 122 158 264 5.97e-29 114
MsG0380016450.01.T01 AT4G32730 47.525 101 53 0 16 116 87 187 7.20e-29 116
MsG0380016450.01.T01 AT4G32730 47.525 101 53 0 16 116 87 187 7.20e-29 116
MsG0380016450.01.T01 AT4G32730 47.525 101 53 0 16 116 87 187 7.20e-29 116
MsG0380016450.01.T01 AT4G32730 47.525 101 53 0 16 116 87 187 7.20e-29 116
MsG0380016450.01.T01 AT4G32730 47.525 101 53 0 16 116 87 187 9.48e-29 116
MsG0380016450.01.T01 AT5G14750 45.614 114 61 1 4 116 6 119 1.05e-28 109
MsG0380016450.01.T01 AT3G12720 51.402 107 49 2 16 120 24 129 1.86e-28 111
MsG0380016450.01.T01 AT5G40330 47.059 102 53 1 16 116 14 115 1.98e-27 106
MsG0380016450.01.T01 AT4G25560 41.429 140 61 3 16 135 12 150 3.85e-27 107
MsG0380016450.01.T01 AT1G18570 47.059 102 53 1 16 116 15 116 4.33e-27 108
MsG0380016450.01.T01 AT3G48920 47.368 114 51 3 16 122 20 131 5.48e-27 106
MsG0380016450.01.T01 AT4G26930 30.496 282 142 7 16 268 21 277 7.63e-27 108
MsG0380016450.01.T01 AT4G18770 49.533 107 51 1 16 122 217 320 9.29e-27 108
MsG0380016450.01.T01 AT1G79180 46.789 109 55 2 10 116 10 117 2.34e-26 105
MsG0380016450.01.T01 AT5G65230 45.133 113 59 2 6 116 4 115 3.78e-26 105
MsG0380016450.01.T01 AT3G27920 46.078 102 54 1 16 116 16 117 5.36e-26 102
MsG0380016450.01.T01 AT4G00540 36.041 197 87 6 13 206 100 260 1.15e-25 105
MsG0380016450.01.T01 AT3G53200 46.729 107 54 2 16 120 11 116 1.22e-25 102
MsG0380016450.01.T01 AT5G10280 45.133 113 59 2 6 116 4 115 1.25e-25 104
MsG0380016450.01.T01 AT3G23250 45.098 102 55 1 16 116 14 115 1.64e-25 103
MsG0380016450.01.T01 AT4G00540 36.041 197 87 6 13 206 98 258 2.43e-25 105
MsG0380016450.01.T01 AT3G12820 44.068 118 63 2 1 116 1 117 4.91e-25 100
MsG0380016450.01.T01 AT2G26950 42.857 112 60 2 12 122 14 122 5.55e-25 103
MsG0380016450.01.T01 AT2G25230 40.741 108 61 1 18 125 28 132 6.82e-25 100
MsG0380016450.01.T01 AT1G74080 48.421 95 48 1 16 109 14 108 8.46e-25 102
MsG0380016450.01.T01 AT2G26960 44.167 120 64 2 2 118 6 125 9.41e-25 103
MsG0380016450.01.T01 AT1G63910 48.113 106 52 2 16 119 14 118 1.06e-24 102
MsG0380016450.01.T01 AT4G17785 44.737 114 60 2 5 116 4 116 1.12e-24 102
MsG0380016450.01.T01 AT3G13890 40.667 150 78 5 16 157 14 160 1.13e-24 102
MsG0380016450.01.T01 AT4G17785 44.737 114 60 2 5 116 4 116 1.25e-24 102
MsG0380016450.01.T01 AT4G38620 47.573 103 51 2 16 116 14 115 1.80e-24 100
MsG0380016450.01.T01 AT4G01680 44.762 105 55 2 16 118 14 117 1.85e-24 99.4
MsG0380016450.01.T01 AT1G56160 44.037 109 58 2 10 116 10 117 2.08e-24 100
MsG0380016450.01.T01 AT2G32460 42.017 119 66 2 2 118 6 123 2.53e-24 102
MsG0380016450.01.T01 AT5G54230 45.098 102 55 1 16 116 14 115 2.78e-24 100
MsG0380016450.01.T01 AT4G05100 43.860 114 61 2 5 116 4 116 2.79e-24 100
MsG0380016450.01.T01 AT5G52600 40.164 122 67 2 16 131 14 135 2.87e-24 97.8
MsG0380016450.01.T01 AT1G74430 43.119 109 59 2 10 116 8 115 3.38e-24 99.4
MsG0380016450.01.T01 AT4G01680 44.762 105 55 2 16 118 14 117 3.87e-24 100
MsG0380016450.01.T01 AT3G30210 44.643 112 59 2 13 122 26 136 4.69e-24 99.0
MsG0380016450.01.T01 AT1G22640 47.573 103 51 2 16 116 14 115 4.74e-24 98.6
MsG0380016450.01.T01 AT5G60890 41.509 106 61 1 16 120 14 119 4.92e-24 99.4
MsG0380016450.01.T01 AT5G61420 43.396 106 59 1 16 120 14 119 7.07e-24 100
MsG0380016450.01.T01 AT3G11440 43.269 104 58 1 16 118 43 146 7.66e-24 100
MsG0380016450.01.T01 AT3G01140 44.037 109 58 2 10 116 8 115 7.86e-24 99.8
MsG0380016450.01.T01 AT5G06100 41.818 110 63 1 10 118 28 137 8.85e-24 100
MsG0380016450.01.T01 AT3G61250 46.602 103 52 2 16 116 14 115 9.79e-24 98.6
MsG0380016450.01.T01 AT3G11440 43.269 104 58 1 16 118 43 146 1.13e-23 100
MsG0380016450.01.T01 AT3G11440 43.269 104 58 1 16 118 43 146 1.13e-23 100
MsG0380016450.01.T01 AT3G11440 43.269 104 58 1 16 118 43 146 1.13e-23 100
MsG0380016450.01.T01 AT3G01140 44.037 109 58 2 10 116 51 158 1.24e-23 99.8
MsG0380016450.01.T01 AT5G06100 41.818 110 63 1 10 118 28 137 1.39e-23 100
MsG0380016450.01.T01 AT5G06100 41.818 110 63 1 10 118 28 137 1.39e-23 100
MsG0380016450.01.T01 AT5G06100 41.818 110 63 1 10 118 28 137 1.39e-23 100
MsG0380016450.01.T01 AT5G06100 41.818 110 63 1 10 118 28 137 1.39e-23 100
MsG0380016450.01.T01 AT3G13890 37.975 158 80 5 16 157 14 169 1.46e-23 99.4
MsG0380016450.01.T01 AT1G57560 44.660 103 54 2 16 116 14 115 1.61e-23 97.4
MsG0380016450.01.T01 AT1G35515 43.137 102 57 1 16 116 14 115 1.63e-23 95.9
MsG0380016450.01.T01 AT1G57560 44.660 103 54 2 16 116 14 115 1.67e-23 98.2
MsG0380016450.01.T01 AT2G31180 45.631 103 53 2 16 116 14 115 1.92e-23 96.7
MsG0380016450.01.T01 AT5G56110 44.954 109 57 2 10 116 8 115 2.04e-23 98.2
MsG0380016450.01.T01 AT4G28110 42.593 108 61 1 10 116 8 115 2.25e-23 97.1
MsG0380016450.01.T01 AT1G18710 41.284 109 61 2 10 116 8 115 2.32e-23 97.1
MsG0380016450.01.T01 AT3G13540 42.991 107 60 1 16 121 25 131 2.61e-23 96.3
MsG0380016450.01.T01 AT2G32460 45.714 105 54 2 16 118 8 111 3.06e-23 99.4
MsG0380016450.01.T01 AT3G02940 42.593 108 61 1 10 116 8 115 3.28e-23 97.4
MsG0380016450.01.T01 AT5G07700 45.098 102 55 1 16 116 14 115 3.62e-23 97.8
MsG0380016450.01.T01 AT5G07700 45.098 102 55 1 16 116 14 115 3.62e-23 97.8
MsG0380016450.01.T01 AT5G26660 44.762 105 55 2 16 118 14 117 4.12e-23 97.8
MsG0380016450.01.T01 AT1G09540 43.925 107 57 2 16 120 14 119 4.72e-23 97.8
MsG0380016450.01.T01 AT5G16770 42.593 108 61 1 10 116 8 115 5.11e-23 97.1
MsG0380016450.01.T01 AT5G16770 42.593 108 61 1 10 116 8 115 5.11e-23 97.1
MsG0380016450.01.T01 AT1G16490 42.241 116 64 2 10 123 10 124 5.55e-23 95.9
MsG0380016450.01.T01 AT3G02940 42.593 108 61 1 10 116 8 115 5.79e-23 96.7
MsG0380016450.01.T01 AT3G02940 42.593 108 61 1 10 116 8 115 5.79e-23 96.7
MsG0380016450.01.T01 AT2G16720 44.660 103 54 2 16 116 14 115 6.49e-23 95.9
MsG0380016450.01.T01 AT5G23000 44.037 109 59 2 10 116 8 116 6.74e-23 96.7
MsG0380016450.01.T01 AT5G16770 42.593 108 61 1 10 116 8 115 7.79e-23 96.7
MsG0380016450.01.T01 AT5G16770 42.593 108 61 1 10 116 8 115 7.79e-23 96.7
MsG0380016450.01.T01 AT5G07690 43.564 101 56 1 16 115 14 114 8.36e-23 96.7
MsG0380016450.01.T01 AT5G57620 41.284 109 62 2 10 116 8 116 9.44e-23 96.3
MsG0380016450.01.T01 AT5G12870 39.496 119 69 2 5 121 9 126 1.02e-22 95.5
MsG0380016450.01.T01 AT5G15310 41.667 108 62 1 10 116 8 115 1.05e-22 96.3
MsG0380016450.01.T01 AT5G15310 41.667 108 62 1 10 116 8 115 1.08e-22 95.9
MsG0380016450.01.T01 AT4G34990 45.631 103 53 2 16 116 14 115 1.10e-22 95.1
MsG0380016450.01.T01 AT4G09460 43.689 103 55 2 16 116 14 115 1.26e-22 94.4
MsG0380016450.01.T01 AT1G06180 40.517 116 66 2 16 129 14 128 1.47e-22 94.4
MsG0380016450.01.T01 AT3G28470 45.545 101 54 1 10 109 8 108 1.50e-22 95.5
MsG0380016450.01.T01 AT4G01680 40.171 117 55 2 16 118 14 129 1.89e-22 95.9
MsG0380016450.01.T01 AT4G21440 45.631 103 53 2 16 116 14 115 2.27e-22 95.5
MsG0380016450.01.T01 AT5G15310 41.667 108 62 1 10 116 8 115 2.28e-22 93.6
MsG0380016450.01.T01 AT5G55020 43.810 105 58 1 16 119 28 132 2.71e-22 97.1
MsG0380016450.01.T01 AT5G14340 44.762 105 55 2 16 118 26 129 2.83e-22 94.0
MsG0380016450.01.T01 AT1G34670 42.593 108 61 1 10 116 8 115 3.31e-22 95.5
MsG0380016450.01.T01 AT3G49690 41.284 109 62 2 10 116 8 116 4.27e-22 94.4
MsG0380016450.01.T01 AT1G79180 35.616 146 60 2 10 121 10 155 4.66e-22 94.4
MsG0380016450.01.T01 AT5G52260 47.573 103 51 2 16 116 14 115 5.77e-22 93.2
MsG0380016450.01.T01 AT3G46130 44.037 109 58 2 16 122 11 118 7.19e-22 92.8
MsG0380016450.01.T01 AT1G66370 39.474 114 68 1 8 120 2 115 8.22e-22 92.0
MsG0380016450.01.T01 AT3G47600 39.655 116 69 1 10 124 8 123 8.39e-22 94.0
MsG0380016450.01.T01 AT5G59780 43.119 109 59 2 16 122 10 117 8.84e-22 92.0
MsG0380016450.01.T01 AT5G62470 41.346 104 61 0 16 119 14 117 1.08e-21 94.0
MsG0380016450.01.T01 AT5G49330 44.118 102 56 1 16 116 14 115 1.79e-21 93.2
MsG0380016450.01.T01 AT5G35550 45.263 95 51 1 16 109 16 110 2.52e-21 91.3
MsG0380016450.01.T01 AT5G65790 37.600 125 72 3 10 132 8 128 2.81e-21 92.8
MsG0380016450.01.T01 AT4G13480 40.476 126 64 3 16 131 8 132 3.12e-21 90.9
MsG0380016450.01.T01 AT5G14750 52.941 68 32 0 49 116 18 85 4.18e-21 88.2
MsG0380016450.01.T01 AT3G24310 44.762 105 55 2 16 118 20 123 5.49e-21 90.5
MsG0380016450.01.T01 AT3G08500 42.308 104 59 1 16 118 32 135 7.01e-21 91.3
MsG0380016450.01.T01 AT3G01530 40.000 120 69 2 5 122 16 134 1.01e-20 88.2
MsG0380016450.01.T01 AT2G47190 36.090 133 84 1 4 135 10 142 1.46e-20 89.4
MsG0380016450.01.T01 AT1G74650 43.137 102 57 1 16 116 14 115 1.47e-20 90.5
MsG0380016450.01.T01 AT3G60460 48.958 96 47 2 16 109 13 108 1.66e-20 89.7
MsG0380016450.01.T01 AT3G53200 52.778 72 34 0 49 120 12 83 2.92e-20 87.0
MsG0380016450.01.T01 AT1G68320 42.453 106 58 2 16 119 21 125 3.44e-20 88.6
MsG0380016450.01.T01 AT5G62470 40.952 105 61 1 16 119 14 118 4.90e-20 89.4
MsG0380016450.01.T01 AT2G47460 43.137 102 57 1 16 116 14 115 5.32e-20 89.4
MsG0380016450.01.T01 AT4G37780 37.615 109 66 2 10 116 8 116 6.01e-20 88.2
MsG0380016450.01.T01 AT5G16600 41.071 112 63 2 10 119 8 118 8.49e-20 88.2
MsG0380016450.01.T01 AT4G12350 31.250 176 105 5 16 188 14 176 8.66e-20 87.4
MsG0380016450.01.T01 AT3G28910 39.815 108 64 1 10 116 8 115 1.13e-19 87.8
MsG0380016450.01.T01 AT2G36890 41.284 109 62 2 10 116 8 116 1.32e-19 87.0
MsG0380016450.01.T01 AT1G25340 37.607 117 69 1 16 132 20 132 1.32e-19 86.7
MsG0380016450.01.T01 AT1G56650 36.957 138 85 2 11 146 5 142 1.38e-19 86.3
MsG0380016450.01.T01 AT1G25340 38.655 119 70 2 16 132 20 137 1.45e-19 86.7
MsG0380016450.01.T01 AT1G66380 41.667 108 62 1 11 117 5 112 1.67e-19 83.2
MsG0380016450.01.T01 AT2G36890 41.284 109 62 2 10 116 49 157 1.88e-19 87.4
MsG0380016450.01.T01 AT1G25340 37.607 117 69 1 16 132 20 132 2.40e-19 86.7
MsG0380016450.01.T01 AT1G08810 40.741 108 63 1 10 116 8 115 2.46e-19 86.3
MsG0380016450.01.T01 AT1G66230 39.823 113 65 2 10 120 8 119 4.10e-19 85.5
MsG0380016450.01.T01 AT4G22680 41.284 109 61 2 10 116 8 115 4.66e-19 85.1
MsG0380016450.01.T01 AT5G40350 43.158 95 53 1 16 109 19 113 6.32e-19 83.6
MsG0380016450.01.T01 AT5G40430 26.531 196 126 4 2 186 40 228 7.12e-19 84.3
MsG0380016450.01.T01 AT2G02820 35.484 124 80 0 19 142 33 156 7.50e-19 85.5
MsG0380016450.01.T01 AT1G48000 44.211 95 52 1 16 109 34 128 9.19e-19 84.0
MsG0380016450.01.T01 AT3G27810 43.158 95 53 1 16 109 22 116 9.65e-19 83.6
MsG0380016450.01.T01 AT2G02820 35.484 124 80 0 19 142 33 156 1.17e-18 85.9
MsG0380016450.01.T01 AT2G02820 35.484 124 80 0 19 142 33 156 1.36e-18 85.9
MsG0380016450.01.T01 AT3G06490 41.593 113 63 2 9 119 14 125 2.67e-18 84.0
MsG0380016450.01.T01 AT5G49620 32.370 173 103 3 6 177 18 177 3.00e-18 83.6
MsG0380016450.01.T01 AT3G62610 40.196 102 60 1 16 116 14 115 3.05e-18 84.0
MsG0380016450.01.T01 AT1G14350 35.075 134 73 2 19 152 28 147 6.16e-18 84.0
MsG0380016450.01.T01 AT1G14350 35.075 134 73 2 19 152 28 147 6.16e-18 84.0
MsG0380016450.01.T01 AT3G12820 51.471 68 33 0 49 116 2 69 7.89e-18 80.1
MsG0380016450.01.T01 AT5G59780 48.649 74 38 0 49 122 23 96 9.59e-18 80.5
MsG0380016450.01.T01 AT3G46130 48.649 74 38 0 49 122 13 86 1.34e-17 80.1
MsG0380016450.01.T01 AT1G66390 39.815 108 64 1 11 117 5 112 1.39e-17 80.9
MsG0380016450.01.T01 AT3G18100 40.426 94 56 0 16 109 546 639 1.56e-17 83.2
MsG0380016450.01.T01 AT3G46130 48.649 74 38 0 49 122 23 96 1.56e-17 80.5
MsG0380016450.01.T01 AT3G18100 40.426 94 56 0 16 109 498 591 1.76e-17 83.2
MsG0380016450.01.T01 AT3G18100 40.426 94 56 0 16 109 385 478 2.17e-17 82.8
MsG0380016450.01.T01 AT3G18100 40.426 94 56 0 16 109 333 426 2.46e-17 82.4
MsG0380016450.01.T01 AT5G35550 54.839 62 28 0 49 110 53 114 1.23e-16 78.2
MsG0380016450.01.T01 AT5G62320 41.818 110 54 3 16 116 15 123 1.54e-16 77.8
MsG0380016450.01.T01 AT5G26660 47.143 70 37 0 49 118 17 86 4.16e-16 77.8
MsG0380016450.01.T01 AT3G47600 46.053 76 41 0 49 124 42 117 5.08e-16 77.4
MsG0380016450.01.T01 AT2G37630 37.963 108 64 1 16 120 4 111 1.85e-15 76.3
MsG0380016450.01.T01 AT5G40350 50.820 61 30 0 49 109 8 68 2.69e-15 72.8
MsG0380016450.01.T01 AT3G27810 50.820 61 30 0 49 109 7 67 4.39e-15 72.4
MsG0380016450.01.T01 AT5G49620 29.947 187 103 4 6 177 18 191 1.02e-14 73.6
MsG0380016450.01.T01 AT1G66380 46.835 79 42 0 49 127 11 89 7.76e-14 67.0
MsG0380016450.01.T01 AT5G14750 46.552 58 31 0 59 116 1 58 9.22e-14 67.8
MsG0380016450.01.T01 AT5G14750 46.552 58 31 0 59 116 1 58 9.22e-14 67.8
MsG0380016450.01.T01 AT1G71030 44.615 65 36 0 52 116 5 69 2.59e-13 67.4
MsG0380016450.01.T01 AT1G71030 44.615 65 36 0 52 116 19 83 3.18e-13 67.4
MsG0380016450.01.T01 AT3G23250 46.552 58 31 0 59 116 1 58 1.20e-12 66.6
MsG0380016450.01.T01 AT1G22640 50.000 58 29 0 59 116 1 58 1.23e-12 65.9
MsG0380016450.01.T01 AT1G09770 38.824 85 51 1 17 101 8 91 2.65e-11 64.7

Find 51 sgRNAs with CRISPR-Local

Find 89 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAGCAATTGAATTCCAATTC+TGG 0.202639 3:+83662022 None:intergenic
GGAGCAACCCTCTTGTAATT+TGG 0.255085 3:+83660911 None:intergenic
AAAGGTCTTCTGTTAATTCT+TGG 0.286487 3:+83661376 None:intergenic
AACAATATGGTGCCCAGAAT+TGG 0.308300 3:-83662035 MsG0380016450.01.T01:CDS
CGTCAACTTGTTGAACAATA+TGG 0.317875 3:-83662048 MsG0380016450.01.T01:CDS
CTTCTAGTTCTCTTGCCTCT+TGG 0.331265 3:-83661090 MsG0380016450.01.T01:CDS
GAATCATTGGCATGTTATAA+TGG 0.349760 3:-83661248 MsG0380016450.01.T01:CDS
AAAGGATCTAATATTTATAA+AGG 0.368916 3:-83660989 MsG0380016450.01.T01:CDS
ACTTCTCTTGCCACATAACT+TGG 0.368979 3:+83661204 None:intergenic
AATTGGCAGGGAAAAGTTGT+AGG 0.376520 3:-83661423 MsG0380016450.01.T01:intron
ATCGGATTCACGGGAACAAA+TGG 0.391338 3:-83661318 MsG0380016450.01.T01:CDS
AGTGATGAGAATGCTTGATT+TGG 0.399409 3:+83660935 None:intergenic
AGCAATTGAATTCCAATTCT+GGG 0.403769 3:+83662023 None:intergenic
TGGAAGGATAAAGAAGGATT+TGG 0.409645 3:-83660855 MsG0380016450.01.T01:CDS
TATCCTATTCTCGTTGTGTA+AGG 0.412400 3:+83661142 None:intergenic
TCTTCTTCCTCTTCTGTGAA+AGG 0.428456 3:+83661358 None:intergenic
TTCCCTTACACAACGAGAAT+AGG 0.434078 3:-83661145 MsG0380016450.01.T01:CDS
GAAAATTGCATCACAAGAAA+AGG 0.447843 3:-83661007 MsG0380016450.01.T01:CDS
TGGACAACTCTTGGTATCTT+CGG 0.464079 3:+83662107 None:intergenic
AATACATACCTGATCTTCCT+TGG 0.468542 3:+83661992 None:intergenic
CAGGGAAAAGTTGTAGGTTG+AGG 0.483082 3:-83661417 MsG0380016450.01.T01:CDS
GTAAGGGAAATTAAGTATAG+AGG 0.483574 3:+83661159 None:intergenic
TTGCGGCTCATCGGATTCAC+GGG 0.496141 3:-83661327 MsG0380016450.01.T01:CDS
AGAGTTGTCCACGTGGTCAC+TGG 0.498220 3:-83662095 MsG0380016450.01.T01:CDS
ATAATGCTGTGAAGAATCAT+TGG 0.498884 3:-83661261 MsG0380016450.01.T01:CDS
CAGAAGACCTTTCACAGAAG+AGG 0.503737 3:-83661365 MsG0380016450.01.T01:CDS
CTTGCGGCTCATCGGATTCA+CGG 0.514410 3:-83661328 MsG0380016450.01.T01:CDS
TCGGATTCACGGGAACAAAT+GGG 0.515800 3:-83661317 MsG0380016450.01.T01:CDS
TAAATTCTTCTGATGATGGA+AGG 0.520438 3:-83660871 MsG0380016450.01.T01:CDS
CAAGAGGCAAGAGAACTAGA+AGG 0.520571 3:+83661091 None:intergenic
GTGACCACGTGGACAACTCT+TGG 0.531230 3:+83662098 None:intergenic
TATAATGGCTAGAAAACAAA+GGG 0.536500 3:-83661233 MsG0380016450.01.T01:CDS
ACAGCATTATCAGTTCTACC+AGG 0.552201 3:+83661274 None:intergenic
AGAGACTACTTGCGGCTCAT+CGG 0.552562 3:-83661336 MsG0380016450.01.T01:CDS
TGATGATGGAAGGATAAAGA+AGG 0.563335 3:-83660861 MsG0380016450.01.T01:CDS
CACAAACTTAAAGTCTTCCA+CGG 0.569463 3:-83660798 MsG0380016450.01.T01:CDS
GGAAAAGTTGTAGGTTGAGG+TGG 0.578152 3:-83661414 MsG0380016450.01.T01:CDS
CATCACTTCCAAATTACAAG+AGG 0.582216 3:-83660919 MsG0380016450.01.T01:CDS
ACGAGAATAGGATATGAGAA+TGG 0.583593 3:-83661133 MsG0380016450.01.T01:CDS
ATCCTATTCTCGTTGTGTAA+GGG 0.584803 3:+83661143 None:intergenic
AGGGAACAATCCAAGTTATG+TGG 0.586173 3:-83661214 MsG0380016450.01.T01:CDS
ACACCAAGAAAATCAATGAA+AGG 0.589466 3:+83660725 None:intergenic
GCGATCTTGCTCTTTCTCCG+TGG 0.615714 3:+83660781 None:intergenic
ATCACTTCCAAATTACAAGA+GGG 0.621174 3:-83660918 MsG0380016450.01.T01:CDS
TTATAATGGCTAGAAAACAA+AGG 0.628974 3:-83661234 MsG0380016450.01.T01:CDS
CAGCATTATCAGTTCTACCA+GGG 0.636613 3:+83661275 None:intergenic
CATAGAAGCAAAATTCCAAG+AGG 0.652007 3:+83661075 None:intergenic
GGAAGAAGAGAGACTACTTG+CGG 0.656523 3:-83661344 MsG0380016450.01.T01:CDS
GAAAGAGCAAGATCGCGATG+AGG 0.688655 3:-83660774 MsG0380016450.01.T01:CDS
GCGGGTCGCCAGTGACCACG+TGG 0.707521 3:+83662087 None:intergenic
GATACCAAGAGTTGTCCACG+TGG 0.765012 3:-83662102 MsG0380016450.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTTTTTTTTCCTTTTAAT+TGG - Chr3:83661395-83661414 MsG0380016450.01.T01:CDS 10.0%
!! AAAGGATCTAATATTTATAA+AGG - Chr3:83661846-83661865 MsG0380016450.01.T01:intron 15.0%
!! ATGAATTTGAAAATTAAACA+AGG + Chr3:83660917-83660936 None:intergenic 15.0%
!! TTTAAAAAACCAAAAACATT+TGG + Chr3:83661948-83661967 None:intergenic 15.0%
!!! CTTACCAATTAAAATTTTAT+TGG + Chr3:83661292-83661311 None:intergenic 15.0%
!!! TCAACCAATAAAATTTTAAT+TGG - Chr3:83661285-83661304 MsG0380016450.01.T01:CDS 15.0%
!! AATTTGAAAATTAAACAAGG+AGG + Chr3:83660914-83660933 None:intergenic 20.0%
!! TACATGAGATAATTAATAGA+TGG + Chr3:83661334-83661353 None:intergenic 20.0%
!! TTCAAATTCATAGTGAAATT+GGG - Chr3:83660926-83660945 MsG0380016450.01.T01:CDS 20.0%
!! TTTCAAATTCATAGTGAAAT+TGG - Chr3:83660925-83660944 MsG0380016450.01.T01:CDS 20.0%
!!! TTTGGAATTTTTGGTTATTT+TGG - Chr3:83661192-83661211 MsG0380016450.01.T01:CDS 20.0%
!!! TTTTTAAATTCTTCTGATGA+TGG - Chr3:83661960-83661979 MsG0380016450.01.T01:intron 20.0%
! TATAATGGCTAGAAAACAAA+GGG - Chr3:83661602-83661621 MsG0380016450.01.T01:intron 25.0%
! TTATAATGGCTAGAAAACAA+AGG - Chr3:83661601-83661620 MsG0380016450.01.T01:intron 25.0%
!!! GTTATTTTGGTTTTCTCTAT+TGG - Chr3:83661205-83661224 MsG0380016450.01.T01:CDS 25.0%
!!! TTTTTTCCTTTTAATTGGCA+GGG - Chr3:83661400-83661419 MsG0380016450.01.T01:CDS 25.0%
!!! TTTTTTTCCTTTTAATTGGC+AGG - Chr3:83661399-83661418 MsG0380016450.01.T01:CDS 25.0%
AAAGGTCTTCTGTTAATTCT+TGG + Chr3:83661462-83661481 None:intergenic 30.0%
ACACCAAGAAAATCAATGAA+AGG + Chr3:83662113-83662132 None:intergenic 30.0%
AGCAATTGAATTCCAATTCT+GGG + Chr3:83660815-83660834 None:intergenic 30.0%
ATAATGCTGTGAAGAATCAT+TGG - Chr3:83661574-83661593 MsG0380016450.01.T01:intron 30.0%
ATCACTTCCAAATTACAAGA+GGG - Chr3:83661917-83661936 MsG0380016450.01.T01:intron 30.0%
ATGTTAAGAAGAAGGATATC+AGG - Chr3:83660995-83661014 MsG0380016450.01.T01:CDS 30.0%
GAAAATTGCATCACAAGAAA+AGG - Chr3:83661828-83661847 MsG0380016450.01.T01:intron 30.0%
GAATCATTGGCATGTTATAA+TGG - Chr3:83661587-83661606 MsG0380016450.01.T01:intron 30.0%
GTAAGGGAAATTAAGTATAG+AGG + Chr3:83661679-83661698 None:intergenic 30.0%
TGATATCCTTCTTCTTAACA+TGG + Chr3:83660996-83661015 None:intergenic 30.0%
! ATTCAAGTTTCTGTTGTTCT+TGG - Chr3:83661114-83661133 MsG0380016450.01.T01:CDS 30.0%
! TTACATTTGCTTGTTGAGTT+TGG - Chr3:83661174-83661193 MsG0380016450.01.T01:CDS 30.0%
! TTTCTTGTGATGCAATTTTC+AGG + Chr3:83661828-83661847 None:intergenic 30.0%
!! CTTGTTGAGTTTGGAATTTT+TGG - Chr3:83661183-83661202 MsG0380016450.01.T01:CDS 30.0%
!! TAAATTCTTCTGATGATGGA+AGG - Chr3:83661964-83661983 MsG0380016450.01.T01:intron 30.0%
!!! GTTCCTTTCATTGATTTTCT+TGG - Chr3:83662107-83662126 MsG0380016450.01.T01:CDS 30.0%
!!! TTCATTGATTTTCTTGGTGT+TGG - Chr3:83662113-83662132 MsG0380016450.01.T01:CDS 30.0%
AATACATACCTGATCTTCCT+TGG + Chr3:83660846-83660865 None:intergenic 35.0%
ACGAGAATAGGATATGAGAA+TGG - Chr3:83661702-83661721 MsG0380016450.01.T01:intron 35.0%
AGTGATGAGAATGCTTGATT+TGG + Chr3:83661903-83661922 None:intergenic 35.0%
AGTTTCTGTTGTTCTTGGAT+TGG - Chr3:83661119-83661138 MsG0380016450.01.T01:CDS 35.0%
ATCCTATTCTCGTTGTGTAA+GGG + Chr3:83661695-83661714 None:intergenic 35.0%
CACAAACTTAAAGTCTTCCA+CGG - Chr3:83662037-83662056 MsG0380016450.01.T01:CDS 35.0%
CAGCAATTGAATTCCAATTC+TGG + Chr3:83660816-83660835 None:intergenic 35.0%
CATAGAAGCAAAATTCCAAG+AGG + Chr3:83661763-83661782 None:intergenic 35.0%
CATCACTTCCAAATTACAAG+AGG - Chr3:83661916-83661935 MsG0380016450.01.T01:intron 35.0%
GAAATGCCATGTTAAGAAGA+AGG - Chr3:83660987-83661006 MsG0380016450.01.T01:CDS 35.0%
GATATCAGGAAGTTTCTTGA+TGG - Chr3:83661009-83661028 MsG0380016450.01.T01:CDS 35.0%
GGTGTTTATGTTAGTGAGAA+GGG - Chr3:83661030-83661049 MsG0380016450.01.T01:CDS 35.0%
TATCCTATTCTCGTTGTGTA+AGG + Chr3:83661696-83661715 None:intergenic 35.0%
TCAATTGCTGAAAAACTCCA+AGG - Chr3:83660826-83660845 MsG0380016450.01.T01:CDS 35.0%
TCTTCTTAACATGGCATTTC+TGG + Chr3:83660987-83661006 None:intergenic 35.0%
TGGAAGGATAAAGAAGGATT+TGG - Chr3:83661980-83661999 MsG0380016450.01.T01:intron 35.0%
TGGTGTTTATGTTAGTGAGA+AGG - Chr3:83661029-83661048 MsG0380016450.01.T01:CDS 35.0%
TTATGTTAGTGAGAAGGGAT+CGG - Chr3:83661035-83661054 MsG0380016450.01.T01:CDS 35.0%
! ACGAAGTTTTTCATCTTCAG+CGG + Chr3:83660770-83660789 None:intergenic 35.0%
! ACTTTTCCCTGCCAATTAAA+AGG + Chr3:83661409-83661428 None:intergenic 35.0%
!! CGTCAACTTGTTGAACAATA+TGG - Chr3:83660787-83660806 MsG0380016450.01.T01:CDS 35.0%
!! TGATGATGGAAGGATAAAGA+AGG - Chr3:83661974-83661993 MsG0380016450.01.T01:intron 35.0%
!!! TTGGATTGGTTACTGTTTTG+TGG - Chr3:83661133-83661152 MsG0380016450.01.T01:CDS 35.0%
AACAATATGGTGCCCAGAAT+TGG - Chr3:83660800-83660819 MsG0380016450.01.T01:CDS 40.0%
AATTGGCAGGGAAAAGTTGT+AGG - Chr3:83661412-83661431 MsG0380016450.01.T01:CDS 40.0%
ACAGCATTATCAGTTCTACC+AGG + Chr3:83661564-83661583 None:intergenic 40.0%
ACTTCTCTTGCCACATAACT+TGG + Chr3:83661634-83661653 None:intergenic 40.0%
AGGGAACAATCCAAGTTATG+TGG - Chr3:83661621-83661640 MsG0380016450.01.T01:intron 40.0%
CAGCATTATCAGTTCTACCA+GGG + Chr3:83661563-83661582 None:intergenic 40.0%
GAAAAACTCCAAGGAAGATC+AGG - Chr3:83660835-83660854 MsG0380016450.01.T01:CDS 40.0%
TCTTCTTCCTCTTCTGTGAA+AGG + Chr3:83661480-83661499 None:intergenic 40.0%
TGGACAACTCTTGGTATCTT+CGG + Chr3:83660731-83660750 None:intergenic 40.0%
TTCCCTTACACAACGAGAAT+AGG - Chr3:83661690-83661709 MsG0380016450.01.T01:intron 40.0%
! AGGGTTGCTCCAAATGTTTT+TGG - Chr3:83661936-83661955 MsG0380016450.01.T01:intron 40.0%
! CGAAGTTTTTCATCTTCAGC+GGG + Chr3:83660769-83660788 None:intergenic 40.0%
! CTAATAGCAAGACTTTTCCC+TGG - Chr3:83661543-83661562 MsG0380016450.01.T01:intron 40.0%
ATCGGATTCACGGGAACAAA+TGG - Chr3:83661517-83661536 MsG0380016450.01.T01:intron 45.0%
CAAGAGGCAAGAGAACTAGA+AGG + Chr3:83661747-83661766 None:intergenic 45.0%
CAGAAGACCTTTCACAGAAG+AGG - Chr3:83661470-83661489 MsG0380016450.01.T01:intron 45.0%
CAGGGAAAAGTTGTAGGTTG+AGG - Chr3:83661418-83661437 MsG0380016450.01.T01:intron 45.0%
GGAAGAAGAGAGACTACTTG+CGG - Chr3:83661491-83661510 MsG0380016450.01.T01:intron 45.0%
GGAGCAACCCTCTTGTAATT+TGG + Chr3:83661927-83661946 None:intergenic 45.0%
TCGGATTCACGGGAACAAAT+GGG - Chr3:83661518-83661537 MsG0380016450.01.T01:intron 45.0%
! GGAAAAGTTGTAGGTTGAGG+TGG - Chr3:83661421-83661440 MsG0380016450.01.T01:intron 45.0%
!! CTTCTAGTTCTCTTGCCTCT+TGG - Chr3:83661745-83661764 MsG0380016450.01.T01:intron 45.0%
AGAGACTACTTGCGGCTCAT+CGG - Chr3:83661499-83661518 MsG0380016450.01.T01:intron 50.0%
GAAAGAGCAAGATCGCGATG+AGG - Chr3:83662061-83662080 MsG0380016450.01.T01:CDS 50.0%
GATACCAAGAGTTGTCCACG+TGG - Chr3:83660733-83660752 MsG0380016450.01.T01:CDS 50.0%
TGTTAGTGAGAAGGGATCGG+TGG - Chr3:83661038-83661057 MsG0380016450.01.T01:CDS 50.0%
AGAGTTGTCCACGTGGTCAC+TGG - Chr3:83660740-83660759 MsG0380016450.01.T01:CDS 55.0%
CTTGCGGCTCATCGGATTCA+CGG - Chr3:83661507-83661526 MsG0380016450.01.T01:intron 55.0%
GCGATCTTGCTCTTTCTCCG+TGG + Chr3:83662057-83662076 None:intergenic 55.0%
GTGACCACGTGGACAACTCT+TGG + Chr3:83660740-83660759 None:intergenic 55.0%
TTGCGGCTCATCGGATTCAC+GGG - Chr3:83661508-83661527 MsG0380016450.01.T01:intron 55.0%
GCGGGTCGCCAGTGACCACG+TGG + Chr3:83660751-83660770 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
Chr3 gene 83660706 83662151 83660706 ID=MsG0380016450.01;Name=MsG0380016450.01
Chr3 mRNA 83660706 83662151 83660706 ID=MsG0380016450.01.T01;Parent=MsG0380016450.01;Name=MsG0380016450.01.T01;_AED=0.49;_eAED=0.49;_QI=0|0|0|1|1|1|2|0|293
Chr3 exon 83662001 83662151 83662001 ID=MsG0380016450.01.T01:exon:33330;Parent=MsG0380016450.01.T01
Chr3 exon 83660706 83661436 83660706 ID=MsG0380016450.01.T01:exon:33329;Parent=MsG0380016450.01.T01
Chr3 CDS 83662001 83662151 83662001 ID=MsG0380016450.01.T01:cds;Parent=MsG0380016450.01.T01
Chr3 CDS 83660706 83661436 83660706 ID=MsG0380016450.01.T01:cds;Parent=MsG0380016450.01.T01
Gene Sequence

>MsG0380016450.01.T01

ATGGAGGATTCTTCTTCTGCAGCCGAAGATACCAAGAGTTGTCCACGTGGTCACTGGCGACCCGCTGAAGATGAAAAACTTCGTCAACTTGTTGAACAATATGGTGCCCAGAATTGGAATTCAATTGCTGAAAAACTCCAAGGAAGATCAGGGAAAAGTTGTAGGTTGAGGTGGTTCAATCAGCTAGATCCAAGAATTAACAGAAGACCTTTCACAGAAGAGGAAGAAGAGAGACTACTTGCGGCTCATCGGATTCACGGGAACAAATGGGCACTAATAGCAAGACTTTTCCCTGGTAGAACTGATAATGCTGTGAAGAATCATTGGCATGTTATAATGGCTAGAAAACAAAGGGAACAATCCAAGTTATGTGGCAAGAGAAGTTTTCAAGAAGTTTTTTCTAACTCCTCTATACTTAATTTCCCTTACACAACGAGAATAGGATATGAGAATGGAAGATTCTATGATAATACACCTTCTAGTTCTCTTGCCTCTTGGAATTTTGCTTCTATGTCAACAACAACAACAAACACTACTACTGCTACTACTATTTTACCTGAAAATTGCATCACAAGAAAAGGATCTAATATTTATAAAGGCTCAGATAGATCATTTCTCTACAGAATTTGTCCAAATCAAGCATTCTCATCACTTCCAAATTACAAGAGGGTTGCTCCAAATGTTTTTGGTTTTTTAAATTCTTCTGATGATGGAAGGATAAAGAAGGATTTGGTGAGTAGTTTATGTGATAACTCATCAACATTAATCACAAACTTAAAGTCTTCCACGGAGAAAGAGCAAGATCGCGATGAGGTCGAAATTGAGCAGCACAAAGAAGTTCCTTTCATTGATTTTCTTGGTGTTGGTGTCTCTTCATCATAA
Protein sequence

>MsG0380016450.01.T01

MEDSSSAAEDTKSCPRGHWRPAEDEKLRQLVEQYGAQNWNSIAEKLQGRSGKSCRLRWFNQLDPRINRRPFTEEEEERLLAAHRIHGNKWALIARLFPGRTDNAVKNHWHVIMARKQREQSKLCGKRSFQEVFSNSSILNFPYTTRIGYENGRFYDNTPSSSLASWNFASMSTTTTNTTTATTILPENCITRKGSNIYKGSDRSFLYRICPNQAFSSLPNYKRVAPNVFGFLNSSDDGRIKKDLVSSLCDNSSTLITNLKSSTEKEQDRDEVEIEQHKEVPFIDFLGVGVSSS*