Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380017216.01.T01 | XP_013461784.1 | 93.625 | 800 | 47 | 1 | 1 | 796 | 1 | 800 | 0 | 1464 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380017216.01.T01 | F4IXE7 | 30.085 | 472 | 258 | 7 | 335 | 793 | 617 | 1029 | 9.97E-62 | 229 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380017216.01.T01 | A0A072V1D9 | 93.625 | 800 | 47 | 1 | 1 | 796 | 1 | 800 | 0.0 | 1464 |
| Gene ID | Type | Classification |
|---|---|---|
| MsG0380017216.01.T01 | TR | PHD |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380017216.01.T01 | MTR_3g103110 | 93.625 | 800 | 47 | 1 | 1 | 796 | 1 | 800 | 0.0 | 1464 |
| MsG0380017216.01.T01 | MTR_7g109640 | 65.533 | 853 | 180 | 11 | 1 | 796 | 1 | 796 | 0.0 | 1017 |
| MsG0380017216.01.T01 | MTR_3g103120 | 59.916 | 711 | 170 | 6 | 97 | 796 | 235 | 841 | 0.0 | 764 |
| MsG0380017216.01.T01 | MTR_3g103120 | 69.027 | 226 | 62 | 3 | 1 | 218 | 1 | 226 | 7.09e-82 | 280 |
| MsG0380017216.01.T01 | MTR_5g024390 | 70.043 | 464 | 95 | 5 | 339 | 796 | 3 | 428 | 0.0 | 667 |
| MsG0380017216.01.T01 | MTR_5g024500 | 70.000 | 460 | 102 | 5 | 339 | 796 | 3 | 428 | 0.0 | 660 |
| MsG0380017216.01.T01 | MTR_5g071340 | 31.047 | 802 | 414 | 23 | 15 | 789 | 397 | 1086 | 2.40e-108 | 358 |
| MsG0380017216.01.T01 | MTR_3g464550 | 39.309 | 463 | 212 | 9 | 338 | 787 | 602 | 1008 | 2.45e-100 | 335 |
| MsG0380017216.01.T01 | MTR_3g103160 | 38.255 | 596 | 201 | 15 | 198 | 789 | 6 | 438 | 2.32e-83 | 273 |
| MsG0380017216.01.T01 | MTR_2g078040 | 33.621 | 464 | 242 | 7 | 335 | 787 | 758 | 1166 | 1.40e-74 | 265 |
| MsG0380017216.01.T01 | MTR_1g103830 | 32.543 | 464 | 249 | 7 | 335 | 787 | 602 | 1012 | 4.65e-66 | 240 |
| MsG0380017216.01.T01 | MTR_1g072130 | 30.128 | 468 | 261 | 8 | 335 | 789 | 808 | 1222 | 2.52e-61 | 226 |
| MsG0380017216.01.T01 | MTR_7g095140 | 31.090 | 312 | 201 | 4 | 484 | 793 | 8 | 307 | 3.13e-47 | 172 |
| MsG0380017216.01.T01 | MTR_1g068930 | 25.698 | 358 | 207 | 8 | 484 | 791 | 511 | 859 | 2.28e-35 | 144 |
| MsG0380017216.01.T01 | MTR_1g068930 | 25.698 | 358 | 207 | 8 | 484 | 791 | 548 | 896 | 2.62e-35 | 144 |
| MsG0380017216.01.T01 | MTR_4g099530 | 27.419 | 310 | 194 | 8 | 489 | 787 | 209 | 498 | 1.91e-29 | 124 |
| MsG0380017216.01.T01 | MTR_4g056990 | 25.382 | 327 | 191 | 9 | 481 | 760 | 271 | 591 | 1.31e-26 | 116 |
| MsG0380017216.01.T01 | MTR_4g050090 | 24.675 | 462 | 261 | 15 | 373 | 790 | 226 | 644 | 3.18e-26 | 115 |
| MsG0380017216.01.T01 | MTR_4g057290 | 24.928 | 345 | 189 | 7 | 481 | 759 | 171 | 511 | 1.84e-25 | 112 |
| MsG0380017216.01.T01 | MTR_6g061000 | 62.821 | 78 | 24 | 2 | 468 | 541 | 25 | 101 | 3.64e-25 | 100 |
| MsG0380017216.01.T01 | MTR_1g062330 | 25.097 | 518 | 315 | 21 | 309 | 789 | 323 | 804 | 8.86e-25 | 111 |
| MsG0380017216.01.T01 | MTR_7g102610 | 27.547 | 265 | 156 | 7 | 554 | 794 | 698 | 950 | 1.82e-22 | 103 |
| MsG0380017216.01.T01 | MTR_2g084425 | 30.220 | 182 | 118 | 4 | 615 | 793 | 847 | 1022 | 9.69e-20 | 95.1 |
| MsG0380017216.01.T01 | MTR_3g109988 | 33.750 | 160 | 83 | 7 | 614 | 758 | 204 | 355 | 8.49e-15 | 77.0 |
| MsG0380017216.01.T01 | MTR_3g110005 | 33.750 | 160 | 83 | 7 | 614 | 758 | 204 | 355 | 8.49e-15 | 77.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380017216.01.T01 | AT5G58610 | 29.358 | 763 | 394 | 18 | 42 | 787 | 143 | 777 | 7.11e-92 | 307 |
| MsG0380017216.01.T01 | AT5G58610 | 29.358 | 763 | 394 | 18 | 42 | 787 | 374 | 1008 | 2.27e-90 | 306 |
| MsG0380017216.01.T01 | AT5G58610 | 29.358 | 763 | 394 | 18 | 42 | 787 | 374 | 1008 | 2.27e-90 | 306 |
| MsG0380017216.01.T01 | AT5G58610 | 29.358 | 763 | 394 | 18 | 42 | 787 | 374 | 1008 | 4.92e-90 | 306 |
| MsG0380017216.01.T01 | AT5G58610 | 29.358 | 763 | 394 | 18 | 42 | 787 | 365 | 999 | 6.55e-90 | 306 |
| MsG0380017216.01.T01 | AT5G58610 | 29.358 | 763 | 394 | 18 | 42 | 787 | 365 | 999 | 7.26e-90 | 306 |
| MsG0380017216.01.T01 | AT5G58610 | 28.364 | 758 | 382 | 17 | 42 | 787 | 365 | 973 | 4.61e-82 | 284 |
| MsG0380017216.01.T01 | AT5G58610 | 28.364 | 758 | 382 | 17 | 42 | 787 | 365 | 973 | 5.31e-82 | 284 |
| MsG0380017216.01.T01 | AT5G58610 | 28.270 | 711 | 365 | 18 | 42 | 735 | 374 | 956 | 3.84e-75 | 263 |
| MsG0380017216.01.T01 | AT5G58610 | 28.270 | 711 | 365 | 18 | 42 | 735 | 365 | 947 | 5.31e-75 | 263 |
| MsG0380017216.01.T01 | AT5G36740 | 30.819 | 464 | 255 | 9 | 335 | 787 | 541 | 949 | 2.03e-65 | 237 |
| MsG0380017216.01.T01 | AT5G36740 | 30.819 | 464 | 255 | 9 | 335 | 787 | 541 | 949 | 2.03e-65 | 237 |
| MsG0380017216.01.T01 | AT3G14980 | 30.085 | 472 | 258 | 7 | 335 | 793 | 572 | 984 | 9.05e-63 | 229 |
| MsG0380017216.01.T01 | AT3G14980 | 30.085 | 472 | 258 | 7 | 335 | 793 | 617 | 1029 | 1.02e-62 | 229 |
| MsG0380017216.01.T01 | AT3G14980 | 30.085 | 472 | 258 | 7 | 335 | 793 | 617 | 1029 | 1.02e-62 | 229 |
| MsG0380017216.01.T01 | AT3G14980 | 30.085 | 472 | 258 | 7 | 335 | 793 | 617 | 1029 | 1.02e-62 | 229 |
| MsG0380017216.01.T01 | AT3G14980 | 30.085 | 472 | 258 | 7 | 335 | 793 | 617 | 1029 | 2.36e-62 | 228 |
| MsG0380017216.01.T01 | AT5G36740 | 30.169 | 474 | 255 | 10 | 335 | 787 | 388 | 806 | 3.95e-62 | 227 |
| MsG0380017216.01.T01 | AT1G05380 | 30.886 | 463 | 257 | 7 | 335 | 787 | 516 | 925 | 3.82e-61 | 224 |
| MsG0380017216.01.T01 | AT1G05380 | 30.886 | 463 | 257 | 7 | 335 | 787 | 516 | 925 | 3.82e-61 | 224 |
| MsG0380017216.01.T01 | AT1G05380 | 30.886 | 463 | 257 | 7 | 335 | 787 | 516 | 925 | 3.82e-61 | 224 |
| MsG0380017216.01.T01 | AT5G58610 | 26.895 | 673 | 347 | 18 | 42 | 697 | 365 | 909 | 4.10e-60 | 220 |
| MsG0380017216.01.T01 | AT4G14920 | 28.916 | 498 | 282 | 9 | 303 | 790 | 551 | 986 | 7.97e-58 | 214 |
| MsG0380017216.01.T01 | AT4G14920 | 28.916 | 498 | 282 | 9 | 303 | 790 | 551 | 986 | 7.97e-58 | 214 |
| MsG0380017216.01.T01 | AT4G14920 | 28.916 | 498 | 282 | 9 | 303 | 790 | 551 | 986 | 8.06e-58 | 214 |
| MsG0380017216.01.T01 | AT5G36670 | 28.750 | 480 | 258 | 11 | 335 | 787 | 541 | 963 | 9.29e-57 | 211 |
| MsG0380017216.01.T01 | AT5G36670 | 28.750 | 480 | 258 | 11 | 335 | 787 | 541 | 963 | 9.29e-57 | 211 |
| MsG0380017216.01.T01 | AT5G63900 | 37.299 | 311 | 173 | 9 | 483 | 789 | 250 | 542 | 1.32e-56 | 204 |
| MsG0380017216.01.T01 | AT5G36740 | 30.049 | 406 | 218 | 9 | 335 | 729 | 541 | 891 | 3.87e-54 | 202 |
| MsG0380017216.01.T01 | AT5G36740 | 30.049 | 406 | 218 | 9 | 335 | 729 | 541 | 891 | 3.87e-54 | 202 |
| MsG0380017216.01.T01 | AT5G36670 | 30.049 | 406 | 218 | 9 | 335 | 729 | 541 | 891 | 3.87e-54 | 202 |
| MsG0380017216.01.T01 | AT5G36670 | 28.163 | 490 | 258 | 12 | 335 | 787 | 388 | 820 | 2.69e-53 | 201 |
| MsG0380017216.01.T01 | AT5G36670 | 28.163 | 490 | 258 | 12 | 335 | 787 | 541 | 973 | 3.98e-53 | 200 |
| MsG0380017216.01.T01 | AT3G14980 | 28.382 | 377 | 198 | 7 | 335 | 698 | 617 | 934 | 4.23e-40 | 159 |
| MsG0380017216.01.T01 | AT2G37520 | 24.859 | 531 | 272 | 14 | 320 | 791 | 357 | 819 | 1.53e-36 | 148 |
| MsG0380017216.01.T01 | AT3G53680 | 28.492 | 358 | 190 | 11 | 461 | 762 | 458 | 805 | 8.03e-36 | 146 |
| MsG0380017216.01.T01 | AT3G53680 | 28.492 | 358 | 190 | 11 | 461 | 762 | 460 | 807 | 8.51e-36 | 146 |
| MsG0380017216.01.T01 | AT2G36720 | 27.851 | 377 | 196 | 11 | 480 | 788 | 606 | 974 | 5.09e-34 | 140 |
| MsG0380017216.01.T01 | AT2G36720 | 27.851 | 377 | 196 | 11 | 480 | 788 | 606 | 974 | 5.09e-34 | 140 |
| MsG0380017216.01.T01 | AT2G27980 | 26.260 | 377 | 195 | 10 | 489 | 791 | 694 | 1061 | 3.30e-29 | 125 |
Find 164 sgRNAs with CRISPR-Local
Find 188 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAAACAACATCTTCTTTCTT+TGG | 0.186886 | 3:+93424344 | MsG0380017216.01.T01:CDS |
| TGTGCGGAAAAGTTTCATTT+TGG | 0.198708 | 3:+93425884 | MsG0380017216.01.T01:CDS |
| GTTGCAACTATAAGAATTTA+TGG | 0.208645 | 3:+93426283 | MsG0380017216.01.T01:CDS |
| TTTCTTTGGGTTGGAAGTTT+TGG | 0.214565 | 3:+93424358 | MsG0380017216.01.T01:CDS |
| TACCATTCTCTTACAGCTTC+TGG | 0.232489 | 3:-93424258 | None:intergenic |
| TTGATGTCGCTGCTGCTTCC+TGG | 0.237739 | 3:-93424704 | None:intergenic |
| AGATTAGCTGCAACCGTTAT+TGG | 0.238814 | 3:-93426028 | None:intergenic |
| TACACATTCTTGCTTGCATT+TGG | 0.242887 | 3:-93425825 | None:intergenic |
| CCAACTATTGATGCTTTATC+TGG | 0.251503 | 3:+93426151 | MsG0380017216.01.T01:CDS |
| CATAAACGCTTGAACTTTCA+TGG | 0.256618 | 3:+93426217 | MsG0380017216.01.T01:CDS |
| AAGTGCTGGTAGAAAGAATT+TGG | 0.277416 | 3:+93424311 | MsG0380017216.01.T01:CDS |
| GTTTGTTCTATTTGTGATTT+GGG | 0.285604 | 3:+93425680 | MsG0380017216.01.T01:CDS |
| GCATTCCACCTCAGTTGTTT+AGG | 0.289821 | 3:+93425737 | MsG0380017216.01.T01:CDS |
| TGCTGCAGTTGAAGGGCGTT+CGG | 0.292408 | 3:-93424496 | None:intergenic |
| AAACAACATCTTCTTTCTTT+GGG | 0.299298 | 3:+93424345 | MsG0380017216.01.T01:CDS |
| TTATGTCTAAAGAAGTTGTT+AGG | 0.303385 | 3:+93426001 | MsG0380017216.01.T01:CDS |
| AGAGAATGGTACCGCTTAAC+AGG | 0.307427 | 3:+93424270 | MsG0380017216.01.T01:CDS |
| AACAGTATCGTTATTTGCTT+TGG | 0.308260 | 3:-93425660 | None:intergenic |
| TGTTTGTTCTATTTGTGATT+TGG | 0.310842 | 3:+93425679 | MsG0380017216.01.T01:CDS |
| GAAGGTATTCACTTGTTTCT+TGG | 0.322354 | 3:+93425210 | MsG0380017216.01.T01:CDS |
| GTTGATAAAGAATCAAGTTT+TGG | 0.324712 | 3:+93425232 | MsG0380017216.01.T01:CDS |
| GCTGCAGTTGAAGGGCGTTC+GGG | 0.336474 | 3:-93424495 | None:intergenic |
| ACACATTCTTGCTTGCATTT+GGG | 0.347129 | 3:-93425824 | None:intergenic |
| CATGGCCTTGTATTGCTTGA+TGG | 0.358298 | 3:+93426578 | MsG0380017216.01.T01:CDS |
| TTTAGGTCTCGATCGAGTTC+CGG | 0.360500 | 3:+93425754 | MsG0380017216.01.T01:CDS |
| AAGGCCATGTAGGTCTATTC+AGG | 0.369107 | 3:-93426564 | None:intergenic |
| GAAAATGGGTAAAGTCATTT+CGG | 0.376245 | 3:+93426261 | MsG0380017216.01.T01:CDS |
| TCCCCGCGTCAGAATTTACT+TGG | 0.381326 | 3:-93425535 | None:intergenic |
| CCAGATAAAGCATCAATAGT+TGG | 0.388520 | 3:-93426151 | None:intergenic |
| AAATTGACACTTGTCTTCTC+TGG | 0.394375 | 3:-93426491 | None:intergenic |
| AGTTGCTGCTGCTTCCTCCT+TGG | 0.398593 | 3:-93424769 | None:intergenic |
| CGTGTTAATTTCAATATCAC+TGG | 0.399307 | 3:+93425344 | MsG0380017216.01.T01:CDS |
| AACATCTTCTTTCTTTGGGT+TGG | 0.401046 | 3:+93424349 | MsG0380017216.01.T01:CDS |
| ATCGAGTTCCGGATGGAGAT+TGG | 0.415728 | 3:+93425765 | MsG0380017216.01.T01:CDS |
| TAGGTCTATTCAGGGATTTA+AGG | 0.416516 | 3:-93426555 | None:intergenic |
| CCCTACTTCAGAATTTCCTT+CGG | 0.418606 | 3:-93425624 | None:intergenic |
| TAACAACTTCTTTAGACATA+AGG | 0.419191 | 3:-93425999 | None:intergenic |
| TTTCAATATCACTGGATTTG+AGG | 0.420799 | 3:+93425352 | MsG0380017216.01.T01:CDS |
| GGTTTCTCTTTCGACGGCAA+TGG | 0.423351 | 3:-93424738 | None:intergenic |
| TAAATTTGAATCAGAAGTTA+CGG | 0.429569 | 3:+93425019 | MsG0380017216.01.T01:CDS |
| GATTCTGAAACCTCTAGTTC+CGG | 0.430859 | 3:+93424933 | MsG0380017216.01.T01:CDS |
| TGTTGTTCTTTCTGTTTCCT+CGG | 0.431751 | 3:-93424571 | None:intergenic |
| ATTCTGAAACCTCTAGTTCC+GGG | 0.432792 | 3:+93424934 | MsG0380017216.01.T01:CDS |
| TTTGGGTGTGTAAAGGCGTT+AGG | 0.435106 | 3:+93425902 | MsG0380017216.01.T01:CDS |
| CAGCAGCGACATCAATCTAT+TGG | 0.437179 | 3:+93424712 | MsG0380017216.01.T01:CDS |
| AGTAACAATGTTGTCAAAAG+AGG | 0.439917 | 3:+93425284 | MsG0380017216.01.T01:CDS |
| TATAAGAATTTATGGTCAAA+AGG | 0.441015 | 3:+93426291 | MsG0380017216.01.T01:CDS |
| ACCATCCACTAGTATCTTGT+TGG | 0.443708 | 3:+93425400 | MsG0380017216.01.T01:CDS |
| CAGATAAAGCATCAATAGTT+GGG | 0.446006 | 3:-93426150 | None:intergenic |
| TTGCACTTCAAAATTTCCTT+CGG | 0.447322 | 3:-93425570 | None:intergenic |
| GCAGTGGTGAAAAGAAGAAT+TGG | 0.449591 | 3:+93425948 | MsG0380017216.01.T01:CDS |
| GCTTCCTCCTTGGATTCTCT+CGG | 0.449759 | 3:-93424759 | None:intergenic |
| TCAGAGGCTTCTGGTAAGAA+AGG | 0.450319 | 3:+93425158 | MsG0380017216.01.T01:CDS |
| TCAGAGGATTGTGGTAGAAG+AGG | 0.451281 | 3:+93425101 | MsG0380017216.01.T01:CDS |
| GATTCACTCGGTCGCTTTGA+CGG | 0.451425 | 3:-93424807 | None:intergenic |
| CGGTTGCAGCTAATCTAACT+TGG | 0.454424 | 3:+93426035 | MsG0380017216.01.T01:CDS |
| TGTGTAAAGGCGTTAGGACT+TGG | 0.455855 | 3:+93425908 | MsG0380017216.01.T01:CDS |
| TGCAAGCAAGAATGTGTAGA+TGG | 0.456542 | 3:+93425830 | MsG0380017216.01.T01:CDS |
| GACACATGGACAAAAGCGTT+TGG | 0.456899 | 3:+93426454 | MsG0380017216.01.T01:CDS |
| CAGAGGATTGTGGTAGAAGA+GGG | 0.460042 | 3:+93425102 | MsG0380017216.01.T01:CDS |
| ACAGCTTCTGGACAATGCTC+AGG | 0.460946 | 3:-93424246 | None:intergenic |
| TGAATCAGAAGTTACGGATT+CGG | 0.462982 | 3:+93425025 | MsG0380017216.01.T01:CDS |
| TGATGTCGCTGCTGCTTCCT+GGG | 0.467486 | 3:-93424703 | None:intergenic |
| GTTATACTTCTCCTAACAAT+GGG | 0.474735 | 3:+93424412 | MsG0380017216.01.T01:CDS |
| TGATATTGCTGCTGCTTCCT+CGG | 0.475744 | 3:-93424829 | None:intergenic |
| GAGAAACAGTTGACACGCTT+AGG | 0.478300 | 3:+93426391 | MsG0380017216.01.T01:CDS |
| TTCTTCAATGCAACTCTCGC+AGG | 0.478869 | 3:-93424460 | None:intergenic |
| GTGCAAGTAAATTCTGAAGC+AGG | 0.478869 | 3:+93425587 | MsG0380017216.01.T01:CDS |
| ATCAGAAGTTGATTCAGAAC+TGG | 0.492607 | 3:-93424907 | None:intergenic |
| GACGTTGTTGCTGCAGTTGA+AGG | 0.492904 | 3:-93424504 | None:intergenic |
| AGAGCTACCGAGGGAATCCC+AGG | 0.493555 | 3:+93424686 | MsG0380017216.01.T01:CDS |
| AGGTACGGTATCAACATCAA+TGG | 0.493799 | 3:+93424977 | MsG0380017216.01.T01:CDS |
| ACTAGTATCTTGTTGGGAGA+TGG | 0.496603 | 3:+93425407 | MsG0380017216.01.T01:CDS |
| GCTGAAGCAAATTCTGAAGC+AGG | 0.497345 | 3:+93425497 | MsG0380017216.01.T01:CDS |
| GGTCGTTGTTGGACTGTCAA+AGG | 0.500201 | 3:+93425432 | MsG0380017216.01.T01:CDS |
| TTGTCTTCGATATTGTTCCT+TGG | 0.503462 | 3:-93426338 | None:intergenic |
| CAATTTCTTCGTCTCCACTA+CGG | 0.504197 | 3:+93424526 | MsG0380017216.01.T01:CDS |
| GCTGTTTCCTCAGATTCTCT+CGG | 0.506010 | 3:-93424627 | None:intergenic |
| CCATCCACTAGTATCTTGTT+GGG | 0.506128 | 3:+93425401 | MsG0380017216.01.T01:CDS |
| GGTAGCTCTTTCGATTGTAA+AGG | 0.512790 | 3:-93424672 | None:intergenic |
| GTCATCAGAAGTTGATTCAT+CGG | 0.513368 | 3:-93424865 | None:intergenic |
| CTGCAGTTGAAGGGCGTTCG+GGG | 0.514386 | 3:-93424494 | None:intergenic |
| ACTGGATTTGAGGCTCATGC+TGG | 0.514944 | 3:+93425362 | MsG0380017216.01.T01:CDS |
| AGGCCATGTAGGTCTATTCA+GGG | 0.515704 | 3:-93426563 | None:intergenic |
| CGTTATACTTCTCCTAACAA+TGG | 0.516763 | 3:+93424411 | MsG0380017216.01.T01:CDS |
| CTGATTCAAATTTACTCACA+TGG | 0.517917 | 3:-93425010 | None:intergenic |
| CAGAGGCTTCTGGTAAGAAA+GGG | 0.518719 | 3:+93425159 | MsG0380017216.01.T01:CDS |
| GGGAGATGGAAGGTCGTTGT+TGG | 0.519941 | 3:+93425421 | MsG0380017216.01.T01:CDS |
| CCATGTGTCTATAGCATCCT+CGG | 0.526184 | 3:-93426440 | None:intergenic |
| AGAGAAACCGAGAGAATCCA+AGG | 0.534686 | 3:+93424752 | MsG0380017216.01.T01:CDS |
| GCCGAAGGAAATTCTGAAGT+AGG | 0.536925 | 3:+93425623 | MsG0380017216.01.T01:CDS |
| TGCGAGAGTTGCATTGAAGA+AGG | 0.537811 | 3:+93424462 | MsG0380017216.01.T01:CDS |
| GTCCAGAAGCTGTAAGAGAA+TGG | 0.545236 | 3:+93424256 | MsG0380017216.01.T01:CDS |
| GTCGTTGTTGGACTGTCAAA+GGG | 0.545406 | 3:+93425433 | MsG0380017216.01.T01:CDS |
| GAGAAGAATTCAGAGGATTG+TGG | 0.552564 | 3:+93425092 | MsG0380017216.01.T01:CDS |
| ACGCTTAGGAGTTGAAAGCT+TGG | 0.553379 | 3:+93426405 | MsG0380017216.01.T01:CDS |
| TGATTCAGAACTGGCACTAG+AGG | 0.557607 | 3:-93424898 | None:intergenic |
| TCTCTCGGTTTCTCTTTCGA+CGG | 0.559043 | 3:-93424744 | None:intergenic |
| GTAACAATGTTGTCAAAAGA+GGG | 0.560691 | 3:+93425285 | MsG0380017216.01.T01:CDS |
| CAAGCAATACAAGGCCATGT+AGG | 0.560703 | 3:-93426574 | None:intergenic |
| GCTGCTTCCTGGGATTCCCT+CGG | 0.560736 | 3:-93424693 | None:intergenic |
| GCTGCTTCCTCGGATTCACT+CGG | 0.560843 | 3:-93424819 | None:intergenic |
| TTCTGAATCAACTTCTGATG+AGG | 0.561379 | 3:+93424911 | MsG0380017216.01.T01:CDS |
| TATGTCTAAAGAAGTTGTTA+GGG | 0.563880 | 3:+93426002 | MsG0380017216.01.T01:CDS |
| GTTGTTAGGGAAACCAATAA+CGG | 0.563987 | 3:+93426015 | MsG0380017216.01.T01:CDS |
| AACTACCATCAAGCAATACA+AGG | 0.564139 | 3:-93426583 | None:intergenic |
| TGCAGTTGAAGGGCGTTCGG+GGG | 0.566749 | 3:-93424493 | None:intergenic |
| CCGAAGGAAATTCTGAAGTA+GGG | 0.567971 | 3:+93425624 | MsG0380017216.01.T01:CDS |
| CAAGATCGTAAAGAAAGTGC+TGG | 0.568933 | 3:+93424297 | MsG0380017216.01.T01:CDS |
| GATGTTAATAAAGCTATAGT+AGG | 0.569536 | 3:+93424957 | MsG0380017216.01.T01:CDS |
| AACAATGTTGTCAAAAGAGG+GGG | 0.570596 | 3:+93425287 | MsG0380017216.01.T01:CDS |
| GGTAGCCACGAAAACTATCT+CGG | 0.575564 | 3:-93426317 | None:intergenic |
| GGACAGAACCAATCTCCATC+CGG | 0.578561 | 3:-93425773 | None:intergenic |
| CCCCGCGTCAGAATTTACTT+GGG | 0.579731 | 3:-93425534 | None:intergenic |
| TGCAAGTAAATTCTGAAGCA+GGG | 0.580351 | 3:+93425588 | MsG0380017216.01.T01:CDS |
| GCCCAAGTAAATTCTGACGC+GGG | 0.582837 | 3:+93425533 | MsG0380017216.01.T01:CDS |
| ATTAACATCCCCGGAACTAG+AGG | 0.586617 | 3:-93424943 | None:intergenic |
| TAATAAAGCTATAGTAGGTA+CGG | 0.586828 | 3:+93424962 | MsG0380017216.01.T01:CDS |
| AGGTAGTGATAAAAGAGGAA+AGG | 0.591418 | 3:+93425049 | MsG0380017216.01.T01:CDS |
| ACGTTGTTGCTGCAGTTGAA+GGG | 0.592488 | 3:-93424503 | None:intergenic |
| TCAAAGACGGAAGGTGAAAG+AGG | 0.593891 | 3:+93425188 | MsG0380017216.01.T01:CDS |
| AAAGAGACCGAGAGAATCTG+AGG | 0.594374 | 3:+93424620 | MsG0380017216.01.T01:CDS |
| TTTAATGGAGAAGAATTCAG+AGG | 0.596793 | 3:+93425085 | MsG0380017216.01.T01:CDS |
| TGTTCTATTTGTGATTTGGG+AGG | 0.600755 | 3:+93425683 | MsG0380017216.01.T01:CDS |
| CTGAAGCAAATTCTGAAGCA+GGG | 0.601311 | 3:+93425498 | MsG0380017216.01.T01:CDS |
| AATCCCTGAATAGACCTACA+TGG | 0.602735 | 3:+93426560 | MsG0380017216.01.T01:CDS |
| TATAGCTTTATTAACATCCC+CGG | 0.602739 | 3:-93424952 | None:intergenic |
| ATCTCCCAACAAGATACTAG+TGG | 0.609147 | 3:-93425405 | None:intergenic |
| GAAAGGGAAGGTATCAAAGA+CGG | 0.611839 | 3:+93425175 | MsG0380017216.01.T01:CDS |
| TCAAGTCACATTGCCAGCAG+TGG | 0.612235 | 3:+93425932 | MsG0380017216.01.T01:CDS |
| AAAGAGATTGAGAGAATCCG+AGG | 0.612293 | 3:+93424554 | MsG0380017216.01.T01:CDS |
| GATCTTGTAGCCCTGTTAAG+CGG | 0.613318 | 3:-93424281 | None:intergenic |
| AGACGGAAGGTGAAAGAGGA+AGG | 0.613430 | 3:+93425192 | MsG0380017216.01.T01:CDS |
| CCCAACAAGATACTAGTGGA+TGG | 0.615712 | 3:-93425401 | None:intergenic |
| TACAATCGAAAGAGCTACCG+AGG | 0.616630 | 3:+93424676 | MsG0380017216.01.T01:CDS |
| GGTCTCGATCGAGTTCCGGA+TGG | 0.624514 | 3:+93425758 | MsG0380017216.01.T01:CDS |
| GGGACTAATGTATTCTGTCG+TGG | 0.624640 | 3:+93425260 | MsG0380017216.01.T01:CDS |
| AAAGAAGAGAAAGTTGAATG+TGG | 0.626130 | 3:+93426099 | MsG0380017216.01.T01:CDS |
| TCGGTAGGTAGTGATAAAAG+AGG | 0.626684 | 3:+93425044 | MsG0380017216.01.T01:CDS |
| CAACTGAGGTGGAATGCAGA+AGG | 0.629465 | 3:-93425731 | None:intergenic |
| TCTTGTTTGTGTTCAATGTG+CGG | 0.633915 | 3:+93425868 | MsG0380017216.01.T01:CDS |
| TCAGAAGTTACGGATTCGGT+AGG | 0.634475 | 3:+93425029 | MsG0380017216.01.T01:CDS |
| GGGAATCATTCTGTTGCCGA+AGG | 0.634763 | 3:+93425608 | MsG0380017216.01.T01:CDS |
| TTAGTTCACGTGATGAAAAG+CGG | 0.635677 | 3:+93425462 | MsG0380017216.01.T01:CDS |
| GGGAATCATTATGTTGCCGA+AGG | 0.635911 | 3:+93425554 | MsG0380017216.01.T01:CDS |
| GAGAGTTGCATTGAAGAAGG+AGG | 0.635933 | 3:+93424465 | MsG0380017216.01.T01:CDS |
| CCCAAGTAAATTCTGACGCG+GGG | 0.636570 | 3:+93425534 | MsG0380017216.01.T01:CDS |
| AGAGTTGCATTGAAGAAGGA+GGG | 0.637310 | 3:+93424466 | MsG0380017216.01.T01:CDS |
| CCGAGGATGCTATAGACACA+TGG | 0.638651 | 3:+93426440 | MsG0380017216.01.T01:CDS |
| TGGCACTAGAGGCTTCAGAA+TGG | 0.640951 | 3:-93424887 | None:intergenic |
| GGCTTCTGGTAAGAAAGGGA+AGG | 0.643581 | 3:+93425163 | MsG0380017216.01.T01:CDS |
| CGAGACCTAAACAACTGAGG+TGG | 0.644826 | 3:-93425742 | None:intergenic |
| TTCTGAAACCTCTAGTTCCG+GGG | 0.647653 | 3:+93424935 | MsG0380017216.01.T01:CDS |
| TAACAATGTTGTCAAAAGAG+GGG | 0.650034 | 3:+93425286 | MsG0380017216.01.T01:CDS |
| GTATCTTGTTGGGAGATGGA+AGG | 0.650656 | 3:+93425411 | MsG0380017216.01.T01:CDS |
| TGCCCAAGTAAATTCTGACG+CGG | 0.656719 | 3:+93425532 | MsG0380017216.01.T01:CDS |
| AAGGAACAATATCGAAGACA+AGG | 0.663403 | 3:+93426340 | MsG0380017216.01.T01:CDS |
| GAGAATGGTACCGCTTAACA+GGG | 0.663915 | 3:+93424271 | MsG0380017216.01.T01:CDS |
| AAAGCGACCGAGTGAATCCG+AGG | 0.665045 | 3:+93424812 | MsG0380017216.01.T01:CDS |
| GGGAAGGTATCAAAGACGGA+AGG | 0.682930 | 3:+93425179 | MsG0380017216.01.T01:CDS |
| ACAATCGAAAGAGCTACCGA+GGG | 0.709602 | 3:+93424677 | MsG0380017216.01.T01:CDS |
| GAAACCGAGAGAATCCAAGG+AGG | 0.723363 | 3:+93424755 | MsG0380017216.01.T01:CDS |
| GATCGAGACCTAAACAACTG+AGG | 0.725123 | 3:-93425745 | None:intergenic |
| TGTGTCTATAGCATCCTCGG+AGG | 0.760446 | 3:-93426437 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAATTTGAATCAGAAGTTA+CGG | + | Chr3:93425019-93425038 | MsG0380017216.01.T01:CDS | 20.0% |
| !! | TATAAGAATTTATGGTCAAA+AGG | + | Chr3:93426291-93426310 | MsG0380017216.01.T01:CDS | 20.0% |
| !! | TATAATGAAGAAAAATTCAG+AGG | + | Chr3:93425142-93425161 | MsG0380017216.01.T01:CDS | 20.0% |
| !!! | AATGTGATTTTAGAGAAAAT+GGG | + | Chr3:93426247-93426266 | MsG0380017216.01.T01:CDS | 20.0% |
| !!! | TAATGTGATTTTAGAGAAAA+TGG | + | Chr3:93426246-93426265 | MsG0380017216.01.T01:CDS | 20.0% |
| ! | AAAACAACATCTTCTTTCTT+TGG | + | Chr3:93424344-93424363 | MsG0380017216.01.T01:CDS | 25.0% |
| ! | AAACAACATCTTCTTTCTTT+GGG | + | Chr3:93424345-93424364 | MsG0380017216.01.T01:CDS | 25.0% |
| ! | ACATTGACAAAAATAGTAAG+TGG | + | Chr3:93424382-93424401 | MsG0380017216.01.T01:CDS | 25.0% |
| ! | CATTGACAAAAATAGTAAGT+GGG | + | Chr3:93424383-93424402 | MsG0380017216.01.T01:CDS | 25.0% |
| ! | GATGTTAATAAAGCTATAGT+AGG | + | Chr3:93424957-93424976 | MsG0380017216.01.T01:CDS | 25.0% |
| ! | GTTGCAACTATAAGAATTTA+TGG | + | Chr3:93426283-93426302 | MsG0380017216.01.T01:CDS | 25.0% |
| ! | GTTTGTTCTATTTGTGATTT+GGG | + | Chr3:93425680-93425699 | MsG0380017216.01.T01:CDS | 25.0% |
| ! | TAACAACTTCTTTAGACATA+AGG | - | Chr3:93426002-93426021 | None:intergenic | 25.0% |
| ! | TAATAAAGCTATAGTAGGTA+CGG | + | Chr3:93424962-93424981 | MsG0380017216.01.T01:CDS | 25.0% |
| ! | TATGTCTAAAGAAGTTGTTA+GGG | + | Chr3:93426002-93426021 | MsG0380017216.01.T01:CDS | 25.0% |
| ! | TGTTTGTTCTATTTGTGATT+TGG | + | Chr3:93425679-93425698 | MsG0380017216.01.T01:CDS | 25.0% |
| ! | TTATGTCTAAAGAAGTTGTT+AGG | + | Chr3:93426001-93426020 | MsG0380017216.01.T01:CDS | 25.0% |
| !! | AGGCTTTTCTAATAGTAATA+TGG | - | Chr3:93424443-93424462 | None:intergenic | 25.0% |
| !!! | AAAGATGTTGTTTTTAGTAG+AGG | + | Chr3:93426187-93426206 | MsG0380017216.01.T01:CDS | 25.0% |
| !!! | GGTTTTAAAAACGAGTTTAA+TGG | + | Chr3:93425070-93425089 | MsG0380017216.01.T01:CDS | 25.0% |
| !!! | GTTGATAAAGAATCAAGTTT+TGG | + | Chr3:93425232-93425251 | MsG0380017216.01.T01:CDS | 25.0% |
| AAAGAAGAGAAAGTTGAATG+TGG | + | Chr3:93426099-93426118 | MsG0380017216.01.T01:CDS | 30.0% | |
| AACAGTATCGTTATTTGCTT+TGG | - | Chr3:93425663-93425682 | None:intergenic | 30.0% | |
| AGTAACAATGTTGTCAAAAG+AGG | + | Chr3:93425284-93425303 | MsG0380017216.01.T01:CDS | 30.0% | |
| CGTGTTAATTTCAATATCAC+TGG | + | Chr3:93425344-93425363 | MsG0380017216.01.T01:CDS | 30.0% | |
| CTGATTCAAATTTACTCACA+TGG | - | Chr3:93425013-93425032 | None:intergenic | 30.0% | |
| GAAAATGGGTAAAGTCATTT+CGG | + | Chr3:93426261-93426280 | MsG0380017216.01.T01:CDS | 30.0% | |
| GTAACAATGTTGTCAAAAGA+GGG | + | Chr3:93425285-93425304 | MsG0380017216.01.T01:CDS | 30.0% | |
| GTTATACTTCTCCTAACAAT+GGG | + | Chr3:93424412-93424431 | MsG0380017216.01.T01:CDS | 30.0% | |
| TAACAATGTTGTCAAAAGAG+GGG | + | Chr3:93425286-93425305 | MsG0380017216.01.T01:CDS | 30.0% | |
| TTGCACTTCAAAATTTCCTT+CGG | - | Chr3:93425573-93425592 | None:intergenic | 30.0% | |
| TTTAATGGAGAAGAATTCAG+AGG | + | Chr3:93425085-93425104 | MsG0380017216.01.T01:CDS | 30.0% | |
| TTTCAATATCACTGGATTTG+AGG | + | Chr3:93425352-93425371 | MsG0380017216.01.T01:CDS | 30.0% | |
| ! | ATATGGTTTTTCCCATTGTT+AGG | - | Chr3:93424426-93424445 | None:intergenic | 30.0% |
| ! | CAGATAAAGCATCAATAGTT+GGG | - | Chr3:93426153-93426172 | None:intergenic | 30.0% |
| ! | CATATTTTGCAACAACATGT+TGG | - | Chr3:93425797-93425816 | None:intergenic | 30.0% |
| !! | TATAGCTTTATTAACATCCC+CGG | - | Chr3:93424955-93424974 | None:intergenic | 30.0% |
| !! | TCAGGTTTTATGTTGATATC+AGG | - | Chr3:93424231-93424250 | None:intergenic | 30.0% |
| !!! | AAGAATCAAGTTTTGGTTTC+AGG | + | Chr3:93425239-93425258 | MsG0380017216.01.T01:CDS | 30.0% |
| !!! | AGAATCAAGTTTTGGTTTCA+GGG | + | Chr3:93425240-93425259 | MsG0380017216.01.T01:CDS | 30.0% |
| AAATTGACACTTGTCTTCTC+TGG | - | Chr3:93426494-93426513 | None:intergenic | 35.0% | |
| AACAATGTTGTCAAAAGAGG+GGG | + | Chr3:93425287-93425306 | MsG0380017216.01.T01:CDS | 35.0% | |
| AACATCTTCTTTCTTTGGGT+TGG | + | Chr3:93424349-93424368 | MsG0380017216.01.T01:CDS | 35.0% | |
| AAGAAAAATTCAGAGGCTTC+TGG | + | Chr3:93425149-93425168 | MsG0380017216.01.T01:CDS | 35.0% | |
| AAGGAACAATATCGAAGACA+AGG | + | Chr3:93426340-93426359 | MsG0380017216.01.T01:CDS | 35.0% | |
| ACACATTCTTGCTTGCATTT+GGG | - | Chr3:93425827-93425846 | None:intergenic | 35.0% | |
| AGGTAGTGATAAAAGAGGAA+AGG | + | Chr3:93425049-93425068 | MsG0380017216.01.T01:CDS | 35.0% | |
| CATAAACGCTTGAACTTTCA+TGG | + | Chr3:93426217-93426236 | MsG0380017216.01.T01:CDS | 35.0% | |
| CCAACTATTGATGCTTTATC+TGG | + | Chr3:93426151-93426170 | MsG0380017216.01.T01:CDS | 35.0% | |
| CGTTATACTTCTCCTAACAA+TGG | + | Chr3:93424411-93424430 | MsG0380017216.01.T01:CDS | 35.0% | |
| GTTGTTAGGGAAACCAATAA+CGG | + | Chr3:93426015-93426034 | MsG0380017216.01.T01:CDS | 35.0% | |
| TACACATTCTTGCTTGCATT+TGG | - | Chr3:93425828-93425847 | None:intergenic | 35.0% | |
| TAGGTCTATTCAGGGATTTA+AGG | - | Chr3:93426558-93426577 | None:intergenic | 35.0% | |
| TGAATCAGAAGTTACGGATT+CGG | + | Chr3:93425025-93425044 | MsG0380017216.01.T01:CDS | 35.0% | |
| TGTTGTTCTTTCTGTTTCCT+CGG | - | Chr3:93424574-93424593 | None:intergenic | 35.0% | |
| TTAGTTCACGTGATGAAAAG+CGG | + | Chr3:93425462-93425481 | MsG0380017216.01.T01:CDS | 35.0% | |
| TTCTGAATCAACTTCTGATG+AGG | + | Chr3:93424911-93424930 | MsG0380017216.01.T01:CDS | 35.0% | |
| TTGTCTTCGATATTGTTCCT+TGG | - | Chr3:93426341-93426360 | None:intergenic | 35.0% | |
| ! | ATCAGAAGTTGATTCAGAAC+TGG | - | Chr3:93424910-93424929 | None:intergenic | 35.0% |
| ! | CCAGATAAAGCATCAATAGT+TGG | - | Chr3:93426154-93426173 | None:intergenic | 35.0% |
| ! | GTCATCAGAAGTTGATTCAT+CGG | - | Chr3:93424868-93424887 | None:intergenic | 35.0% |
| ! | GTGCGGAAAAGTTTCATTTT+GGG | + | Chr3:93425885-93425904 | MsG0380017216.01.T01:CDS | 35.0% |
| ! | TCTTGTTTGTGTTCAATGTG+CGG | + | Chr3:93425868-93425887 | MsG0380017216.01.T01:CDS | 35.0% |
| ! | TGTGCGGAAAAGTTTCATTT+TGG | + | Chr3:93425884-93425903 | MsG0380017216.01.T01:CDS | 35.0% |
| ! | TGTTCTATTTGTGATTTGGG+AGG | + | Chr3:93425683-93425702 | MsG0380017216.01.T01:CDS | 35.0% |
| !! | AAGTGCTGGTAGAAAGAATT+TGG | + | Chr3:93424311-93424330 | MsG0380017216.01.T01:CDS | 35.0% |
| !! | GAAGGTATTCACTTGTTTCT+TGG | + | Chr3:93425210-93425229 | MsG0380017216.01.T01:CDS | 35.0% |
| !! | GGTTTTATGTTGATATCAGG+AGG | - | Chr3:93424228-93424247 | None:intergenic | 35.0% |
| !! | GTTTCATTTTGGGTGTGTAA+AGG | + | Chr3:93425895-93425914 | MsG0380017216.01.T01:CDS | 35.0% |
| !! | TGCAAGTAAATTCTGAAGCA+GGG | + | Chr3:93425588-93425607 | MsG0380017216.01.T01:CDS | 35.0% |
| !!! | AATCTCTTTTTCAACCGTAG+TGG | - | Chr3:93424543-93424562 | None:intergenic | 35.0% |
| !!! | TTTCTTTGGGTTGGAAGTTT+TGG | + | Chr3:93424358-93424377 | MsG0380017216.01.T01:CDS | 35.0% |
| AAAGAGATTGAGAGAATCCG+AGG | + | Chr3:93424554-93424573 | MsG0380017216.01.T01:CDS | 40.0% | |
| AATCCCTGAATAGACCTACA+TGG | + | Chr3:93426560-93426579 | MsG0380017216.01.T01:CDS | 40.0% | |
| ACCATCCACTAGTATCTTGT+TGG | + | Chr3:93425400-93425419 | MsG0380017216.01.T01:CDS | 40.0% | |
| ACTAGTATCTTGTTGGGAGA+TGG | + | Chr3:93425407-93425426 | MsG0380017216.01.T01:CDS | 40.0% | |
| AGAGTTGCATTGAAGAAGGA+GGG | + | Chr3:93424466-93424485 | MsG0380017216.01.T01:CDS | 40.0% | |
| AGGTACGGTATCAACATCAA+TGG | + | Chr3:93424977-93424996 | MsG0380017216.01.T01:CDS | 40.0% | |
| ATCTCCCAACAAGATACTAG+TGG | - | Chr3:93425408-93425427 | None:intergenic | 40.0% | |
| CAATTTCTTCGTCTCCACTA+CGG | + | Chr3:93424526-93424545 | MsG0380017216.01.T01:CDS | 40.0% | |
| CCATCCACTAGTATCTTGTT+GGG | + | Chr3:93425401-93425420 | MsG0380017216.01.T01:CDS | 40.0% | |
| CCCTACTTCAGAATTTCCTT+CGG | - | Chr3:93425627-93425646 | None:intergenic | 40.0% | |
| GAGAAGAATTCAGAGGATTG+TGG | + | Chr3:93425092-93425111 | MsG0380017216.01.T01:CDS | 40.0% | |
| GCAGTGGTGAAAAGAAGAAT+TGG | + | Chr3:93425948-93425967 | MsG0380017216.01.T01:CDS | 40.0% | |
| GGTAGCTCTTTCGATTGTAA+AGG | - | Chr3:93424675-93424694 | None:intergenic | 40.0% | |
| TACCATTCTCTTACAGCTTC+TGG | - | Chr3:93424261-93424280 | None:intergenic | 40.0% | |
| TCGGTAGGTAGTGATAAAAG+AGG | + | Chr3:93425044-93425063 | MsG0380017216.01.T01:CDS | 40.0% | |
| TGCAAGCAAGAATGTGTAGA+TGG | + | Chr3:93425830-93425849 | MsG0380017216.01.T01:CDS | 40.0% | |
| ! | AGATTAGCTGCAACCGTTAT+TGG | - | Chr3:93426031-93426050 | None:intergenic | 40.0% |
| ! | ATTCTTCTTTTCACCACTGC+TGG | - | Chr3:93425948-93425967 | None:intergenic | 40.0% |
| ! | CAAGATCGTAAAGAAAGTGC+TGG | + | Chr3:93424297-93424316 | MsG0380017216.01.T01:CDS | 40.0% |
| !! | AGAGGGGGTTTATTTTCTGA+TGG | + | Chr3:93425302-93425321 | MsG0380017216.01.T01:CDS | 40.0% |
| !! | ATTCTGAAACCTCTAGTTCC+GGG | + | Chr3:93424934-93424953 | MsG0380017216.01.T01:CDS | 40.0% |
| !! | CCGAAGGAAATTCTGAAGTA+GGG | + | Chr3:93425624-93425643 | MsG0380017216.01.T01:CDS | 40.0% |
| !! | CTGAAGCAAATTCTGAAGCA+GGG | + | Chr3:93425498-93425517 | MsG0380017216.01.T01:CDS | 40.0% |
| !! | GAAAGGGAAGGTATCAAAGA+CGG | + | Chr3:93425175-93425194 | MsG0380017216.01.T01:CDS | 40.0% |
| !! | GATTCTGAAACCTCTAGTTC+CGG | + | Chr3:93424933-93424952 | MsG0380017216.01.T01:CDS | 40.0% |
| !! | GTGCAAGTAAATTCTGAAGC+AGG | + | Chr3:93425587-93425606 | MsG0380017216.01.T01:CDS | 40.0% |
| !! | TGGTTTTGCAGTGTAGTTTG+TGG | + | Chr3:93425968-93425987 | MsG0380017216.01.T01:CDS | 40.0% |
| !!! | CAAAAGCGTTTGGTTTTGCT+AGG | + | Chr3:93426464-93426483 | MsG0380017216.01.T01:CDS | 40.0% |
| AAAGAGACCGAGAGAATCTG+AGG | + | Chr3:93424620-93424639 | MsG0380017216.01.T01:CDS | 45.0% | |
| AAGGCCATGTAGGTCTATTC+AGG | - | Chr3:93426567-93426586 | None:intergenic | 45.0% | |
| ACAATCGAAAGAGCTACCGA+GGG | + | Chr3:93424677-93424696 | MsG0380017216.01.T01:CDS | 45.0% | |
| ACGCTTAGGAGTTGAAAGCT+TGG | + | Chr3:93426405-93426424 | MsG0380017216.01.T01:CDS | 45.0% | |
| ACGTTGTTGCTGCAGTTGAA+GGG | - | Chr3:93424506-93424525 | None:intergenic | 45.0% | |
| AGAGAAACCGAGAGAATCCA+AGG | + | Chr3:93424752-93424771 | MsG0380017216.01.T01:CDS | 45.0% | |
| AGAGAATGGTACCGCTTAAC+AGG | + | Chr3:93424270-93424289 | MsG0380017216.01.T01:CDS | 45.0% | |
| AGGCCATGTAGGTCTATTCA+GGG | - | Chr3:93426566-93426585 | None:intergenic | 45.0% | |
| ATTAACATCCCCGGAACTAG+AGG | - | Chr3:93424946-93424965 | None:intergenic | 45.0% | |
| CAAGCAATACAAGGCCATGT+AGG | - | Chr3:93426577-93426596 | None:intergenic | 45.0% | |
| CAGAGGATTGTGGTAGAAGA+GGG | + | Chr3:93425102-93425121 | MsG0380017216.01.T01:CDS | 45.0% | |
| CAGAGGCTTCTGGTAAGAAA+GGG | + | Chr3:93425159-93425178 | MsG0380017216.01.T01:CDS | 45.0% | |
| CAGCAGCGACATCAATCTAT+TGG | + | Chr3:93424712-93424731 | MsG0380017216.01.T01:CDS | 45.0% | |
| CCATGTGTCTATAGCATCCT+CGG | - | Chr3:93426443-93426462 | None:intergenic | 45.0% | |
| CCCAACAAGATACTAGTGGA+TGG | - | Chr3:93425404-93425423 | None:intergenic | 45.0% | |
| CGGTTGCAGCTAATCTAACT+TGG | + | Chr3:93426035-93426054 | MsG0380017216.01.T01:CDS | 45.0% | |
| GAGAAACAGTTGACACGCTT+AGG | + | Chr3:93426391-93426410 | MsG0380017216.01.T01:CDS | 45.0% | |
| GAGAATGGTACCGCTTAACA+GGG | + | Chr3:93424271-93424290 | MsG0380017216.01.T01:CDS | 45.0% | |
| GAGAGTTGCATTGAAGAAGG+AGG | + | Chr3:93424465-93424484 | MsG0380017216.01.T01:CDS | 45.0% | |
| GATCGAGACCTAAACAACTG+AGG | - | Chr3:93425748-93425767 | None:intergenic | 45.0% | |
| GATCTTGTAGCCCTGTTAAG+CGG | - | Chr3:93424284-93424303 | None:intergenic | 45.0% | |
| GCATTCCACCTCAGTTGTTT+AGG | + | Chr3:93425737-93425756 | MsG0380017216.01.T01:CDS | 45.0% | |
| GGGAATCATTATGTTGCCGA+AGG | + | Chr3:93425554-93425573 | MsG0380017216.01.T01:CDS | 45.0% | |
| GGGACTAATGTATTCTGTCG+TGG | + | Chr3:93425260-93425279 | MsG0380017216.01.T01:CDS | 45.0% | |
| GGTAGCCACGAAAACTATCT+CGG | - | Chr3:93426320-93426339 | None:intergenic | 45.0% | |
| GTATCTTGTTGGGAGATGGA+AGG | + | Chr3:93425411-93425430 | MsG0380017216.01.T01:CDS | 45.0% | |
| GTCCAGAAGCTGTAAGAGAA+TGG | + | Chr3:93424256-93424275 | MsG0380017216.01.T01:CDS | 45.0% | |
| GTCGTTGTTGGACTGTCAAA+GGG | + | Chr3:93425433-93425452 | MsG0380017216.01.T01:CDS | 45.0% | |
| TACAATCGAAAGAGCTACCG+AGG | + | Chr3:93424676-93424695 | MsG0380017216.01.T01:CDS | 45.0% | |
| TCAAAGACGGAAGGTGAAAG+AGG | + | Chr3:93425188-93425207 | MsG0380017216.01.T01:CDS | 45.0% | |
| TCAGAGGATTGTGGTAGAAG+AGG | + | Chr3:93425101-93425120 | MsG0380017216.01.T01:CDS | 45.0% | |
| TCAGAGGCTTCTGGTAAGAA+AGG | + | Chr3:93425158-93425177 | MsG0380017216.01.T01:CDS | 45.0% | |
| TCTCTCGGTTTCTCTTTCGA+CGG | - | Chr3:93424747-93424766 | None:intergenic | 45.0% | |
| TGATTCAGAACTGGCACTAG+AGG | - | Chr3:93424901-93424920 | None:intergenic | 45.0% | |
| TGCCCAAGTAAATTCTGACG+CGG | + | Chr3:93425532-93425551 | MsG0380017216.01.T01:CDS | 45.0% | |
| TGCGAGAGTTGCATTGAAGA+AGG | + | Chr3:93424462-93424481 | MsG0380017216.01.T01:CDS | 45.0% | |
| TTCTTCAATGCAACTCTCGC+AGG | - | Chr3:93424463-93424482 | None:intergenic | 45.0% | |
| TTTAGGTCTCGATCGAGTTC+CGG | + | Chr3:93425754-93425773 | MsG0380017216.01.T01:CDS | 45.0% | |
| ! | GATAGTTTTCGTGGCTACCA+AGG | + | Chr3:93426321-93426340 | MsG0380017216.01.T01:CDS | 45.0% |
| ! | GCTGTTTCCTCAGATTCTCT+CGG | - | Chr3:93424630-93424649 | None:intergenic | 45.0% |
| ! | TCAGAAGTTACGGATTCGGT+AGG | + | Chr3:93425029-93425048 | MsG0380017216.01.T01:CDS | 45.0% |
| ! | TGATATTGCTGCTGCTTCCT+CGG | - | Chr3:93424832-93424851 | None:intergenic | 45.0% |
| !! | GACACATGGACAAAAGCGTT+TGG | + | Chr3:93426454-93426473 | MsG0380017216.01.T01:CDS | 45.0% |
| !! | GCCGAAGGAAATTCTGAAGT+AGG | + | Chr3:93425623-93425642 | MsG0380017216.01.T01:CDS | 45.0% |
| !! | GCTGAAGCAAATTCTGAAGC+AGG | + | Chr3:93425497-93425516 | MsG0380017216.01.T01:CDS | 45.0% |
| !! | TGTGTAAAGGCGTTAGGACT+TGG | + | Chr3:93425908-93425927 | MsG0380017216.01.T01:CDS | 45.0% |
| !! | TTCTGAAACCTCTAGTTCCG+GGG | + | Chr3:93424935-93424954 | MsG0380017216.01.T01:CDS | 45.0% |
| !! | TTTGGGTGTGTAAAGGCGTT+AGG | + | Chr3:93425902-93425921 | MsG0380017216.01.T01:CDS | 45.0% |
| !!! | GGTCTCTTTTTCGACTGCAA+TGG | - | Chr3:93424609-93424628 | None:intergenic | 45.0% |
| ACAGCTTCTGGACAATGCTC+AGG | - | Chr3:93424249-93424268 | None:intergenic | 50.0% | |
| AGACGGAAGGTGAAAGAGGA+AGG | + | Chr3:93425192-93425211 | MsG0380017216.01.T01:CDS | 50.0% | |
| ATCGAGTTCCGGATGGAGAT+TGG | + | Chr3:93425765-93425784 | MsG0380017216.01.T01:CDS | 50.0% | |
| CAACTGAGGTGGAATGCAGA+AGG | - | Chr3:93425734-93425753 | None:intergenic | 50.0% | |
| CCCAAGTAAATTCTGACGCG+GGG | + | Chr3:93425534-93425553 | MsG0380017216.01.T01:CDS | 50.0% | |
| CCCCGCGTCAGAATTTACTT+GGG | - | Chr3:93425537-93425556 | None:intergenic | 50.0% | |
| CCGAGGATGCTATAGACACA+TGG | + | Chr3:93426440-93426459 | MsG0380017216.01.T01:CDS | 50.0% | |
| CGAGACCTAAACAACTGAGG+TGG | - | Chr3:93425745-93425764 | None:intergenic | 50.0% | |
| GAAACCGAGAGAATCCAAGG+AGG | + | Chr3:93424755-93424774 | MsG0380017216.01.T01:CDS | 50.0% | |
| GACGTTGTTGCTGCAGTTGA+AGG | - | Chr3:93424507-93424526 | None:intergenic | 50.0% | |
| GCCCAAGTAAATTCTGACGC+GGG | + | Chr3:93425533-93425552 | MsG0380017216.01.T01:CDS | 50.0% | |
| GCTTCCTCCTTGGATTCTCT+CGG | - | Chr3:93424762-93424781 | None:intergenic | 50.0% | |
| GGACAGAACCAATCTCCATC+CGG | - | Chr3:93425776-93425795 | None:intergenic | 50.0% | |
| GGCTTCTGGTAAGAAAGGGA+AGG | + | Chr3:93425163-93425182 | MsG0380017216.01.T01:CDS | 50.0% | |
| GGGAATCATTCTGTTGCCGA+AGG | + | Chr3:93425608-93425627 | MsG0380017216.01.T01:CDS | 50.0% | |
| GGTCGTTGTTGGACTGTCAA+AGG | + | Chr3:93425432-93425451 | MsG0380017216.01.T01:CDS | 50.0% | |
| GGTTTCTCTTTCGACGGCAA+TGG | - | Chr3:93424741-93424760 | None:intergenic | 50.0% | |
| TCAAGTCACATTGCCAGCAG+TGG | + | Chr3:93425932-93425951 | MsG0380017216.01.T01:CDS | 50.0% | |
| TCCCCGCGTCAGAATTTACT+TGG | - | Chr3:93425538-93425557 | None:intergenic | 50.0% | |
| TGGCACTAGAGGCTTCAGAA+TGG | - | Chr3:93424890-93424909 | None:intergenic | 50.0% | |
| TGTGTCTATAGCATCCTCGG+AGG | - | Chr3:93426440-93426459 | None:intergenic | 50.0% | |
| ! | ACTGGATTTGAGGCTCATGC+TGG | + | Chr3:93425362-93425381 | MsG0380017216.01.T01:CDS | 50.0% |
| ! | GATTCACTCGGTCGCTTTGA+CGG | - | Chr3:93424810-93424829 | None:intergenic | 50.0% |
| ! | GGTTGCCGAGATAGTTTTCG+TGG | + | Chr3:93426312-93426331 | MsG0380017216.01.T01:CDS | 50.0% |
| !! | GGGAAGGTATCAAAGACGGA+AGG | + | Chr3:93425179-93425198 | MsG0380017216.01.T01:CDS | 50.0% |
| !!! | CTTGGTTTTGCATTCCTCCG+AGG | + | Chr3:93426423-93426442 | MsG0380017216.01.T01:CDS | 50.0% |
| AAAGCGACCGAGTGAATCCG+AGG | + | Chr3:93424812-93424831 | MsG0380017216.01.T01:CDS | 55.0% | |
| GCTGCTTCCTCGGATTCACT+CGG | - | Chr3:93424822-93424841 | None:intergenic | 55.0% | |
| GGGAGATGGAAGGTCGTTGT+TGG | + | Chr3:93425421-93425440 | MsG0380017216.01.T01:CDS | 55.0% | |
| ! | AGTTGCTGCTGCTTCCTCCT+TGG | - | Chr3:93424772-93424791 | None:intergenic | 55.0% |
| ! | TGATGTCGCTGCTGCTTCCT+GGG | - | Chr3:93424706-93424725 | None:intergenic | 55.0% |
| ! | TTGATGTCGCTGCTGCTTCC+TGG | - | Chr3:93424707-93424726 | None:intergenic | 55.0% |
| !! | TGCTGCAGTTGAAGGGCGTT+CGG | - | Chr3:93424499-93424518 | None:intergenic | 55.0% |
| AGAGCTACCGAGGGAATCCC+AGG | + | Chr3:93424686-93424705 | MsG0380017216.01.T01:CDS | 60.0% | |
| GCTGCTTCCTGGGATTCCCT+CGG | - | Chr3:93424696-93424715 | None:intergenic | 60.0% | |
| GGTCTCGATCGAGTTCCGGA+TGG | + | Chr3:93425758-93425777 | MsG0380017216.01.T01:CDS | 60.0% | |
| !! | CTGCAGTTGAAGGGCGTTCG+GGG | - | Chr3:93424497-93424516 | None:intergenic | 60.0% |
| !! | GCTGCAGTTGAAGGGCGTTC+GGG | - | Chr3:93424498-93424517 | None:intergenic | 60.0% |
| !! | TGCAGTTGAAGGGCGTTCGG+GGG | - | Chr3:93424496-93424515 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr3 | gene | 93424207 | 93426597 | 93424207 | ID=MsG0380017216.01;Name=MsG0380017216.01 |
| Chr3 | mRNA | 93424207 | 93426597 | 93424207 | ID=MsG0380017216.01.T01;Parent=MsG0380017216.01;Name=MsG0380017216.01.T01;_AED=0.26;_eAED=0.26;_QI=0|-1|0|1|-1|1|1|0|796 |
| Chr3 | exon | 93424207 | 93426597 | 93424207 | ID=MsG0380017216.01.T01:exon:25341;Parent=MsG0380017216.01.T01 |
| Chr3 | CDS | 93424207 | 93426597 | 93424207 | ID=MsG0380017216.01.T01:cds;Parent=MsG0380017216.01.T01 |
| Gene Sequence |
| Protein sequence |
