AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0380017368.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380017368.01.T02 MTR_3g106060 80.292 137 25 1 10 146 54 188 8.78e-79 235
MsG0380017368.01.T02 MTR_1g013760 54.962 131 46 4 10 130 49 176 6.67e-42 140
MsG0380017368.01.T02 MTR_2g105060 61.972 71 25 1 76 146 76 144 7.09e-26 98.6
MsG0380017368.01.T02 MTR_4g007060 65.152 66 21 1 76 141 144 207 8.15e-26 98.2
MsG0380017368.01.T02 MTR_4g007060 54.762 84 30 2 63 146 103 178 8.37e-26 99.4
MsG0380017368.01.T02 MTR_4g007060 54.762 84 30 2 63 146 137 212 1.50e-25 99.4
MsG0380017368.01.T02 MTR_2g105060 61.972 71 25 1 76 146 151 219 1.73e-25 99.0
MsG0380017368.01.T02 MTR_1g013790 62.069 58 22 0 73 130 80 137 1.94e-22 89.7
MsG0380017368.01.T02 MTR_4g094412 41.111 90 43 3 41 130 191 270 1.11e-15 73.2
MsG0380017368.01.T02 MTR_4g094412 41.111 90 43 3 41 130 200 279 1.18e-15 73.2
MsG0380017368.01.T02 MTR_2g023930 42.667 75 36 3 72 146 288 355 8.71e-14 67.8
MsG0380017368.01.T02 MTR_7g009730 45.455 55 27 1 93 147 218 269 1.19e-13 67.4
MsG0380017368.01.T02 MTR_5g097490 48.571 70 30 3 78 147 238 301 1.33e-13 67.0
MsG0380017368.01.T02 MTR_7g110720 41.176 68 38 1 79 146 201 266 2.34e-13 66.6
MsG0380017368.01.T02 MTR_7g110720 41.176 68 38 1 79 146 174 239 2.52e-13 66.2
MsG0380017368.01.T02 MTR_4g107970 38.667 75 41 2 73 147 236 305 3.56e-13 66.2
MsG0380017368.01.T02 MTR_4g107970 44.828 58 30 1 73 130 159 214 3.64e-13 65.9
MsG0380017368.01.T02 MTR_4g132430 42.254 71 37 2 76 146 111 177 3.79e-13 65.9
MsG0380017368.01.T02 MTR_3g031220 44.444 72 34 4 76 147 349 414 9.17e-13 64.7
MsG0380017368.01.T02 MTR_3g053330 42.593 54 31 0 77 130 234 287 2.14e-12 63.9
MsG0380017368.01.T02 MTR_4g049760 47.170 53 28 0 78 130 274 326 2.26e-12 63.5
MsG0380017368.01.T02 MTR_5g094430 51.852 54 23 2 93 146 251 301 2.85e-12 63.5
MsG0380017368.01.T02 MTR_7g080020 39.583 96 49 5 55 147 453 542 2.92e-12 63.5
MsG0380017368.01.T02 MTR_5g094430 51.852 54 23 2 93 146 229 279 2.96e-12 63.2
MsG0380017368.01.T02 MTR_5g094430 51.852 54 23 2 93 146 363 413 3.42e-12 63.2
MsG0380017368.01.T02 MTR_5g042920 43.210 81 38 5 66 146 297 369 3.59e-12 63.2
MsG0380017368.01.T02 MTR_4g132430 40.260 77 42 2 70 146 239 311 3.98e-12 63.2
MsG0380017368.01.T02 MTR_3g056100 51.852 54 23 2 93 146 270 320 4.05e-12 62.8
MsG0380017368.01.T02 MTR_3g056100 51.852 54 23 2 93 146 401 451 4.08e-12 63.2
MsG0380017368.01.T02 MTR_3g056100 51.852 54 23 2 93 146 414 464 4.13e-12 63.2
MsG0380017368.01.T02 MTR_3g056100 51.852 54 23 2 93 146 257 307 4.46e-12 62.8
MsG0380017368.01.T02 MTR_2g088000 42.254 71 37 2 76 146 333 399 1.02e-11 62.0
MsG0380017368.01.T02 MTR_7g080000 44.444 72 34 4 76 147 416 481 1.17e-11 61.6
MsG0380017368.01.T02 MTR_5g074400 44.444 72 34 5 76 147 404 469 1.29e-11 61.6
MsG0380017368.01.T02 MTR_2g045360 45.455 55 28 1 76 130 195 247 1.51e-11 61.2
MsG0380017368.01.T02 MTR_4g082580 46.032 63 28 4 67 129 256 312 2.75e-11 60.5
MsG0380017368.01.T02 MTR_1g015140 44.444 54 27 2 93 146 101 151 4.35e-11 58.2
MsG0380017368.01.T02 MTR_4g049790 45.283 53 29 0 77 129 295 347 5.61e-11 59.7
MsG0380017368.01.T01 MTR_3g106060 86.869 99 13 0 1 99 116 214 1.23e-62 192
MsG0380017368.01.T01 MTR_1g013760 71.000 100 28 1 1 100 118 216 1.02e-49 159
MsG0380017368.01.T01 MTR_2g105060 75.641 78 19 0 5 82 76 153 5.90e-42 137
MsG0380017368.01.T01 MTR_2g105060 75.641 78 19 0 5 82 151 228 1.49e-41 139
MsG0380017368.01.T01 MTR_4g007060 73.684 76 20 0 5 80 110 185 4.53e-39 131
MsG0380017368.01.T01 MTR_4g007060 73.684 76 20 0 5 80 144 219 9.09e-39 131
MsG0380017368.01.T01 MTR_1g013790 61.250 80 31 0 2 81 80 159 8.96e-34 117
MsG0380017368.01.T01 MTR_4g094412 56.579 76 31 1 5 80 218 291 5.09e-27 103
MsG0380017368.01.T01 MTR_4g094412 56.579 76 31 1 5 80 227 300 5.12e-27 103
MsG0380017368.01.T01 MTR_4g007060 69.492 59 18 0 5 63 144 202 1.78e-26 98.2
MsG0380017368.01.T01 MTR_4g107970 53.750 80 35 1 2 81 159 236 4.42e-26 100
MsG0380017368.01.T01 MTR_2g023930 57.500 80 29 2 1 80 288 362 5.38e-26 100
MsG0380017368.01.T01 MTR_4g107970 53.750 80 35 1 2 81 236 313 6.12e-26 100
MsG0380017368.01.T01 MTR_3g053330 52.632 76 36 0 6 81 234 309 1.10e-25 99.4
MsG0380017368.01.T01 MTR_7g110720 54.795 73 33 0 8 80 174 246 2.63e-25 97.8
MsG0380017368.01.T01 MTR_7g110720 54.795 73 33 0 8 80 201 273 2.95e-25 97.8
MsG0380017368.01.T01 MTR_4g132430 55.263 76 32 1 5 80 111 184 3.70e-25 96.7
MsG0380017368.01.T01 MTR_4g132430 55.263 76 32 1 5 80 245 318 6.89e-25 97.1
MsG0380017368.01.T01 MTR_2g088000 54.321 81 32 2 1 81 332 407 9.16e-25 97.1
MsG0380017368.01.T01 MTR_7g009730 62.712 59 22 0 22 80 218 276 1.11e-24 96.7
MsG0380017368.01.T01 MTR_2g045360 47.253 91 43 2 5 92 195 283 3.49e-23 92.0
MsG0380017368.01.T01 MTR_5g094430 61.017 59 22 1 22 80 229 286 2.11e-22 89.7
MsG0380017368.01.T01 MTR_5g094430 46.774 62 31 2 24 85 67 126 1.59e-11 59.3
MsG0380017368.01.T01 MTR_4g049760 50.000 74 37 0 7 80 274 347 2.21e-22 90.1
MsG0380017368.01.T01 MTR_5g094430 61.017 59 22 1 22 80 251 308 2.44e-22 89.7
MsG0380017368.01.T01 MTR_5g094430 46.774 62 31 2 24 85 89 148 1.58e-11 59.3
MsG0380017368.01.T01 MTR_5g094430 61.017 59 22 1 22 80 363 420 2.65e-22 90.1
MsG0380017368.01.T01 MTR_5g094430 46.774 62 31 2 24 85 201 260 1.32e-11 59.7
MsG0380017368.01.T01 MTR_3g056100 61.017 59 22 1 22 80 414 471 4.41e-22 89.4
MsG0380017368.01.T01 MTR_3g056100 42.857 70 38 2 24 93 244 311 3.34e-12 61.2
MsG0380017368.01.T01 MTR_3g056100 61.017 59 22 1 22 80 257 314 4.68e-22 89.0
MsG0380017368.01.T01 MTR_3g056100 42.857 70 38 2 24 93 100 167 2.90e-12 61.6
MsG0380017368.01.T01 MTR_3g056100 61.017 59 22 1 22 80 270 327 4.88e-22 89.0
MsG0380017368.01.T01 MTR_3g056100 42.857 70 38 2 24 93 100 167 3.00e-12 61.2
MsG0380017368.01.T01 MTR_3g056100 61.017 59 22 1 22 80 401 458 5.02e-22 89.4
MsG0380017368.01.T01 MTR_3g056100 42.857 70 38 2 24 93 244 311 3.60e-12 61.2
MsG0380017368.01.T01 MTR_5g097490 52.000 75 33 2 7 81 238 309 7.26e-22 88.2
MsG0380017368.01.T01 MTR_5g016610 56.897 58 25 0 24 81 200 257 1.64e-21 85.9
MsG0380017368.01.T01 MTR_4g082580 48.352 91 42 4 8 98 265 350 2.37e-21 86.7
MsG0380017368.01.T01 MTR_4g082580 39.535 86 45 3 10 95 137 215 3.70e-12 61.2
MsG0380017368.01.T01 MTR_5g042920 53.425 73 31 3 8 80 307 376 2.96e-21 86.7
MsG0380017368.01.T01 MTR_5g042920 52.632 57 25 2 24 80 152 206 1.94e-14 67.8
MsG0380017368.01.T01 MTR_3g104750 55.932 59 25 1 22 80 103 160 3.56e-21 82.4
MsG0380017368.01.T01 MTR_5g091390 56.667 60 25 1 21 80 155 213 3.73e-21 85.5
MsG0380017368.01.T01 MTR_4g049790 48.000 75 39 0 6 80 295 369 4.13e-21 86.7
MsG0380017368.01.T01 MTR_1g086790 58.333 60 24 1 21 80 156 214 4.15e-21 85.5
MsG0380017368.01.T01 MTR_4g094908 56.897 58 25 0 24 81 267 324 9.59e-21 84.7
MsG0380017368.01.T01 MTR_4g094588 55.932 59 25 1 22 80 177 234 1.42e-20 84.3
MsG0380017368.01.T01 MTR_7g011820 53.425 73 31 3 8 80 397 466 2.54e-20 84.3
MsG0380017368.01.T01 MTR_7g011820 43.243 74 40 2 24 97 229 300 1.28e-13 65.5
MsG0380017368.01.T01 MTR_3g031220 50.000 76 35 3 5 80 349 421 2.96e-20 84.3
MsG0380017368.01.T01 MTR_3g031220 49.123 57 27 2 24 80 199 253 4.37e-14 66.6
MsG0380017368.01.T01 MTR_1g070455 55.172 58 26 0 24 81 294 351 3.80e-20 83.2
MsG0380017368.01.T01 MTR_7g109800 50.000 72 33 2 21 92 143 211 5.14e-20 82.0
MsG0380017368.01.T01 MTR_1g015140 54.237 59 26 1 22 80 101 158 6.06e-20 79.3
MsG0380017368.01.T01 MTR_2g033820 51.389 72 31 2 21 89 201 271 7.40e-20 82.8
MsG0380017368.01.T01 MTR_5g043880 55.000 60 26 1 21 80 122 180 7.59e-20 81.6
MsG0380017368.01.T01 MTR_5g074400 50.000 76 35 3 5 80 404 476 7.94e-20 83.2
MsG0380017368.01.T01 MTR_5g074400 49.123 57 27 2 24 80 244 298 1.69e-14 67.8
MsG0380017368.01.T01 MTR_1g009613 54.386 57 26 0 24 80 263 319 1.42e-19 81.6
MsG0380017368.01.T01 MTR_7g071120 54.237 59 26 1 22 80 323 380 1.87e-19 82.0
MsG0380017368.01.T01 MTR_7g071120 38.947 95 42 4 16 96 153 245 1.67e-13 65.1
MsG0380017368.01.T01 MTR_3g009470 50.000 76 35 2 5 80 479 551 3.44e-19 81.3
MsG0380017368.01.T01 MTR_3g009470 50.000 58 27 2 23 80 280 335 9.84e-13 62.8
MsG0380017368.01.T01 MTR_4g127040 54.237 59 27 0 24 82 246 304 4.13e-19 80.1
MsG0380017368.01.T01 MTR_1g077780 47.436 78 38 3 3 80 44 118 4.70e-19 76.6
MsG0380017368.01.T01 MTR_7g100510 53.226 62 28 1 19 80 357 417 5.02e-19 80.5
MsG0380017368.01.T01 MTR_7g100510 52.459 61 27 2 24 84 190 248 3.98e-16 72.4
MsG0380017368.01.T01 MTR_4g013260 54.237 59 26 1 22 80 335 392 5.33e-19 80.5
MsG0380017368.01.T01 MTR_4g013260 46.552 58 30 1 23 80 184 240 1.19e-14 68.2
MsG0380017368.01.T01 MTR_7g080000 47.368 76 37 2 5 80 416 488 1.00e-18 80.1
MsG0380017368.01.T01 MTR_7g080000 46.667 60 30 2 22 81 233 290 8.05e-12 60.1
MsG0380017368.01.T01 MTR_7g062220 47.368 76 38 2 24 99 125 198 1.96e-18 78.2
MsG0380017368.01.T01 MTR_8g092140 44.872 78 38 2 4 81 145 217 2.05e-18 77.0
MsG0380017368.01.T01 MTR_8g087000 51.724 58 28 0 24 81 78 135 2.78e-18 76.6
MsG0380017368.01.T01 MTR_8g087000 51.724 58 28 0 24 81 77 134 2.85e-18 76.6
MsG0380017368.01.T01 MTR_3g095080 51.667 60 28 1 22 81 143 201 2.88e-18 76.3
MsG0380017368.01.T01 MTR_3g095080 51.667 60 28 1 22 81 167 225 3.30e-18 76.6
MsG0380017368.01.T01 MTR_7g028415 52.542 59 27 1 22 80 92 149 3.40e-18 75.1
MsG0380017368.01.T01 MTR_7g028710 52.542 59 27 1 22 80 92 149 3.40e-18 75.1
MsG0380017368.01.T01 MTR_7g080020 54.237 59 26 1 22 80 492 549 3.54e-18 78.2
MsG0380017368.01.T01 MTR_7g080020 46.154 78 37 4 23 97 280 355 2.04e-12 62.0
MsG0380017368.01.T01 MTR_8g092010 52.542 59 27 1 22 80 107 164 5.22e-18 74.7
MsG0380017368.01.T01 MTR_4g122530 51.667 60 28 1 21 80 206 264 7.26e-18 77.4
MsG0380017368.01.T01 MTR_8g096730 47.458 59 30 1 22 80 69 126 1.13e-17 73.2
MsG0380017368.01.T01 MTR_8g007270 51.667 60 28 1 22 81 153 211 2.40e-17 73.9
MsG0380017368.01.T01 MTR_2g016770 41.333 75 44 0 24 98 28 102 3.35e-17 73.2
MsG0380017368.01.T01 MTR_2g016770 41.333 75 44 0 24 98 36 110 3.48e-17 73.6
MsG0380017368.01.T01 MTR_7g079010 49.275 69 34 1 22 90 140 207 4.33e-17 73.2
MsG0380017368.01.T01 MTR_0117s0040 49.123 57 29 0 24 80 75 131 5.51e-17 73.6
MsG0380017368.01.T01 MTR_3g095040 54.237 59 26 1 22 80 117 174 5.58e-17 72.8
MsG0380017368.01.T01 MTR_2g083870 45.714 70 38 0 24 93 81 150 5.89e-17 73.6
MsG0380017368.01.T01 MTR_3g108960 49.123 57 29 0 24 80 315 371 1.61e-16 73.6
MsG0380017368.01.T01 MTR_2g032030 43.836 73 41 0 24 96 268 340 3.35e-16 72.8
MsG0380017368.01.T01 MTR_2g024350 49.153 59 30 0 23 81 8 66 3.54e-16 70.9
MsG0380017368.01.T01 MTR_2g024380 50.847 59 29 0 23 81 251 309 4.29e-16 72.4
MsG0380017368.01.T01 MTR_2g032030 43.836 73 41 0 24 96 268 340 4.72e-16 72.4
MsG0380017368.01.T01 MTR_4g130900 49.123 57 28 1 24 80 360 415 5.95e-16 72.0
MsG0380017368.01.T01 MTR_7g109600 49.123 57 29 0 24 80 54 110 9.11e-16 70.5
MsG0380017368.01.T01 MTR_8g028565 47.368 57 30 0 24 80 156 212 1.31e-15 70.5
MsG0380017368.01.T01 MTR_4g047580 37.838 74 46 0 6 79 264 337 1.84e-15 70.5
MsG0380017368.01.T01 MTR_8g098945 40.541 74 44 0 24 97 130 203 2.73e-15 69.3
MsG0380017368.01.T01 MTR_1g099600 37.079 89 53 1 8 96 173 258 1.77e-14 67.4
MsG0380017368.01.T01 MTR_7g079040 45.614 57 31 0 24 80 155 211 2.04e-14 67.4
MsG0380017368.01.T01 MTR_3g031220 49.123 57 27 2 24 80 199 253 3.57e-14 66.6
MsG0380017368.01.T01 MTR_1g078260 41.333 75 40 3 8 81 234 305 5.93e-14 66.2
MsG0380017368.01.T01 MTR_5g074200 39.726 73 40 3 24 96 221 289 1.72e-13 64.7
MsG0380017368.01.T01 MTR_5g097500 40.278 72 40 2 9 80 218 286 5.23e-13 63.2
MsG0380017368.01.T01 MTR_8g099350 48.276 58 28 1 23 78 132 189 7.57e-13 63.2
MsG0380017368.01.T01 MTR_2g075750 36.667 90 46 3 9 92 10 94 8.93e-13 61.2
MsG0380017368.01.T01 MTR_3g090860 47.458 59 29 1 22 78 132 190 1.17e-12 62.4
MsG0380017368.01.T01 MTR_3g009470 50.000 58 27 2 23 80 280 335 1.45e-12 62.4
MsG0380017368.01.T01 MTR_6g086555 37.333 75 43 3 8 81 193 264 1.61e-12 62.0
MsG0380017368.01.T01 MTR_5g067680 43.077 65 35 1 16 78 195 259 1.82e-12 62.0
MsG0380017368.01.T01 MTR_2g075610 41.538 65 36 1 17 79 23 87 3.31e-12 59.7
MsG0380017368.01.T01 MTR_8g067650 44.828 58 32 0 23 80 339 396 1.54e-11 59.3
MsG0380017368.01.T01 MTR_6g053200 43.103 58 33 0 23 80 330 387 1.57e-11 59.3
MsG0380017368.01.T01 MTR_8g067635 44.828 58 32 0 23 80 349 406 1.57e-11 59.3
MsG0380017368.01.T01 MTR_7g117200 41.772 79 42 2 8 84 105 181 1.59e-11 59.3
MsG0380017368.01.T01 MTR_8g069935 41.379 58 34 0 23 80 331 388 2.26e-11 58.9
MsG0380017368.01.T01 MTR_7g073430 46.552 58 29 1 23 78 122 179 6.85e-11 57.4
MsG0380017368.01.T01 MTR_5g044695 48.980 49 23 1 5 53 61 107 8.27e-11 54.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380017368.01.T02 AT1G80840 41.259 143 75 5 10 146 57 196 3.12e-27 103
MsG0380017368.01.T02 AT4G31800 63.380 71 24 1 76 146 93 161 1.10e-26 100
MsG0380017368.01.T02 AT4G31800 63.380 71 24 1 76 146 158 226 2.57e-26 101
MsG0380017368.01.T02 AT4G31800 71.930 57 16 0 76 132 158 214 1.41e-25 97.8
MsG0380017368.01.T02 AT2G25000 42.478 113 53 2 34 146 53 153 2.58e-23 91.7
MsG0380017368.01.T02 AT2G25000 42.478 113 53 2 34 146 53 153 2.58e-23 91.7
MsG0380017368.01.T02 AT2G25000 42.478 113 53 2 34 146 75 175 3.40e-23 91.7
MsG0380017368.01.T02 AT2G25000 42.478 113 53 2 34 146 96 196 5.75e-23 91.7
MsG0380017368.01.T02 AT5G15130 38.710 93 49 4 55 147 193 277 2.16e-14 69.7
MsG0380017368.01.T02 AT1G68150 43.056 72 36 2 76 147 219 285 2.22e-14 69.3
MsG0380017368.01.T02 AT5G15130 38.710 93 49 4 55 147 151 235 2.41e-14 69.3
MsG0380017368.01.T02 AT1G62300 39.506 81 45 2 66 146 286 362 3.65e-14 68.9
MsG0380017368.01.T02 AT4G01720 43.038 79 38 3 54 130 202 275 5.53e-14 68.6
MsG0380017368.01.T02 AT4G04450 42.254 71 37 2 76 146 182 248 1.62e-13 67.0
MsG0380017368.01.T02 AT4G04450 42.254 71 37 2 76 146 276 342 1.69e-13 67.0
MsG0380017368.01.T02 AT2G04880 53.704 54 22 2 93 146 282 332 6.70e-13 65.1
MsG0380017368.01.T02 AT2G04880 53.704 54 22 2 93 146 306 356 7.06e-13 65.1
MsG0380017368.01.T02 AT1G18860 43.636 55 28 1 93 147 238 289 2.96e-12 63.5
MsG0380017368.01.T02 AT1G69810 37.313 67 40 1 64 130 175 239 3.07e-12 63.2
MsG0380017368.01.T02 AT1G69810 33.333 84 52 2 64 147 117 196 3.38e-12 63.2
MsG0380017368.01.T02 AT4G22070 42.254 71 37 2 76 146 281 347 4.13e-12 63.2
MsG0380017368.01.T02 AT4G22070 42.254 71 37 2 76 146 281 347 4.13e-12 63.2
MsG0380017368.01.T02 AT4G22070 42.254 71 37 2 76 146 281 347 4.13e-12 63.2
MsG0380017368.01.T02 AT4G22070 42.254 71 37 2 76 146 281 347 4.13e-12 63.2
MsG0380017368.01.T02 AT4G26640 46.479 71 33 4 76 146 189 254 4.99e-12 62.8
MsG0380017368.01.T02 AT4G26640 46.479 71 33 4 76 146 189 254 4.99e-12 62.8
MsG0380017368.01.T02 AT4G26640 46.479 71 33 4 76 146 189 254 4.99e-12 62.8
MsG0380017368.01.T02 AT4G26640 46.479 71 33 4 76 146 189 254 4.99e-12 62.8
MsG0380017368.01.T02 AT5G56270 45.833 72 33 5 76 147 471 536 5.07e-12 62.8
MsG0380017368.01.T02 AT4G26640 46.479 71 33 4 76 146 293 358 5.71e-12 62.8
MsG0380017368.01.T02 AT4G26640 46.479 71 33 4 76 146 365 430 6.05e-12 62.4
MsG0380017368.01.T02 AT4G26640 46.479 71 33 4 76 146 325 390 6.69e-12 62.4
MsG0380017368.01.T02 AT5G07100 40.196 102 47 7 33 129 83 175 7.23e-12 61.2
MsG0380017368.01.T02 AT5G07100 40.196 102 47 7 33 129 83 175 7.23e-12 61.2
MsG0380017368.01.T02 AT5G07100 40.196 102 47 7 33 129 83 175 7.23e-12 61.2
MsG0380017368.01.T02 AT5G07100 40.196 102 47 7 33 129 83 175 7.23e-12 61.2
MsG0380017368.01.T02 AT1G13960 41.026 78 38 5 69 146 236 305 9.98e-12 61.6
MsG0380017368.01.T02 AT1G13960 41.026 78 38 5 69 146 389 458 1.75e-11 61.2
MsG0380017368.01.T02 AT5G07100 40.196 102 47 7 33 129 176 268 1.82e-11 60.8
MsG0380017368.01.T02 AT2G38470 42.254 71 36 4 76 146 346 411 5.16e-11 59.7
MsG0380017368.01.T02 AT3G01080 42.308 78 37 5 69 146 286 355 6.81e-11 59.3
MsG0380017368.01.T01 AT4G31800 76.316 76 18 0 5 80 93 168 2.95e-40 133
MsG0380017368.01.T01 AT4G31800 76.316 76 18 0 5 80 158 233 8.61e-40 134
MsG0380017368.01.T01 AT1G80840 75.000 76 19 0 5 80 128 203 8.60e-39 131
MsG0380017368.01.T01 AT2G25000 70.667 75 22 0 6 80 86 160 2.28e-36 123
MsG0380017368.01.T01 AT2G25000 70.667 75 22 0 6 80 86 160 2.28e-36 123
MsG0380017368.01.T01 AT2G25000 70.667 75 22 0 6 80 108 182 7.20e-36 122
MsG0380017368.01.T01 AT2G25000 70.667 75 22 0 6 80 129 203 1.09e-35 122
MsG0380017368.01.T01 AT1G68150 57.895 76 30 1 5 80 219 292 3.22e-27 102
MsG0380017368.01.T01 AT4G31800 75.000 56 14 0 5 60 158 213 3.08e-26 97.4
MsG0380017368.01.T01 AT4G22070 56.579 76 31 1 5 80 281 354 8.41e-26 100
MsG0380017368.01.T01 AT4G22070 56.579 76 31 1 5 80 281 354 8.41e-26 100
MsG0380017368.01.T01 AT4G22070 56.579 76 31 1 5 80 281 354 8.41e-26 100
MsG0380017368.01.T01 AT4G22070 56.579 76 31 1 5 80 281 354 8.41e-26 100
MsG0380017368.01.T01 AT1G62300 56.579 76 31 1 5 80 296 369 1.09e-25 99.8
MsG0380017368.01.T01 AT4G04450 55.263 76 32 1 5 80 182 255 2.32e-25 98.2
MsG0380017368.01.T01 AT4G04450 55.263 76 32 1 5 80 276 349 5.30e-25 97.8
MsG0380017368.01.T01 AT4G01720 59.211 76 26 2 5 80 226 296 6.28e-25 97.4
MsG0380017368.01.T01 AT5G15130 61.667 60 23 0 22 81 184 243 6.78e-25 97.4
MsG0380017368.01.T01 AT5G15130 61.667 60 23 0 22 81 226 285 7.27e-25 97.4
MsG0380017368.01.T01 AT1G18860 61.017 59 23 0 22 80 238 296 3.18e-23 92.8
MsG0380017368.01.T01 AT5G26170 56.667 60 25 1 22 81 112 170 6.27e-23 87.4
MsG0380017368.01.T01 AT1G29860 56.667 60 25 1 21 80 134 192 1.50e-21 86.3
MsG0380017368.01.T01 AT1G13960 52.500 80 32 4 1 80 239 312 1.78e-21 87.0
MsG0380017368.01.T01 AT1G13960 52.632 57 25 2 24 80 77 131 6.02e-15 68.9
MsG0380017368.01.T01 AT5G49520 51.389 72 30 2 9 80 211 277 2.45e-21 87.0
MsG0380017368.01.T01 AT4G26640 52.632 76 33 3 5 80 189 261 2.54e-21 86.7
MsG0380017368.01.T01 AT4G26640 43.662 71 38 2 15 85 27 95 3.38e-12 61.2
MsG0380017368.01.T01 AT4G26640 52.632 76 33 3 5 80 189 261 2.54e-21 86.7
MsG0380017368.01.T01 AT4G26640 43.662 71 38 2 15 85 27 95 3.38e-12 61.2
MsG0380017368.01.T01 AT4G26640 52.632 76 33 3 5 80 189 261 2.54e-21 86.7
MsG0380017368.01.T01 AT4G26640 43.662 71 38 2 15 85 27 95 3.38e-12 61.2
MsG0380017368.01.T01 AT4G26640 52.632 76 33 3 5 80 189 261 2.54e-21 86.7
MsG0380017368.01.T01 AT4G26640 43.662 71 38 2 15 85 27 95 3.38e-12 61.2
MsG0380017368.01.T01 AT1G13960 52.500 80 32 4 1 80 392 465 3.07e-21 87.0
MsG0380017368.01.T01 AT1G13960 52.632 57 25 2 24 80 230 284 6.05e-15 69.3
MsG0380017368.01.T01 AT4G26640 52.632 76 33 3 5 80 293 365 3.53e-21 86.7
MsG0380017368.01.T01 AT4G26640 43.662 71 38 2 15 85 131 199 3.40e-12 61.2
MsG0380017368.01.T01 AT4G26640 59.322 59 23 1 22 80 380 437 3.91e-21 86.7
MsG0380017368.01.T01 AT4G26640 43.662 71 38 2 15 85 203 271 3.19e-12 61.6
MsG0380017368.01.T01 AT5G07100 50.685 73 33 2 8 80 128 197 3.99e-21 83.6
MsG0380017368.01.T01 AT5G07100 36.250 80 50 1 1 80 2 80 8.69e-14 64.3
MsG0380017368.01.T01 AT5G07100 50.685 73 33 2 8 80 128 197 3.99e-21 83.6
MsG0380017368.01.T01 AT5G07100 36.250 80 50 1 1 80 2 80 8.69e-14 64.3
MsG0380017368.01.T01 AT5G07100 50.685 73 33 2 8 80 128 197 3.99e-21 83.6
MsG0380017368.01.T01 AT5G07100 36.250 80 50 1 1 80 2 80 8.69e-14 64.3
MsG0380017368.01.T01 AT5G07100 50.685 73 33 2 8 80 128 197 3.99e-21 83.6
MsG0380017368.01.T01 AT5G07100 36.250 80 50 1 1 80 2 80 8.69e-14 64.3
MsG0380017368.01.T01 AT4G26640 52.632 76 33 3 5 80 325 397 4.01e-21 86.7
MsG0380017368.01.T01 AT4G26640 43.662 71 38 2 15 85 163 231 3.49e-12 61.2
MsG0380017368.01.T01 AT2G04880 59.322 59 23 1 22 80 282 339 7.85e-21 85.9
MsG0380017368.01.T01 AT2G04880 42.373 59 32 2 22 80 110 166 3.74e-11 58.5
MsG0380017368.01.T01 AT2G04880 59.322 59 23 1 22 80 306 363 8.42e-21 85.9
MsG0380017368.01.T01 AT2G04880 42.373 59 32 2 22 80 110 166 3.41e-11 58.5
MsG0380017368.01.T01 AT4G18170 46.753 77 35 3 4 80 158 228 1.03e-20 84.3
MsG0380017368.01.T01 AT5G07100 50.685 73 33 2 8 80 221 290 1.30e-20 84.0
MsG0380017368.01.T01 AT5G07100 35.714 84 53 1 1 84 95 177 1.21e-13 65.1
MsG0380017368.01.T01 AT5G56270 51.316 76 34 3 5 80 471 543 1.99e-20 84.7
MsG0380017368.01.T01 AT5G56270 49.153 59 28 2 22 80 272 328 8.98e-13 63.2
MsG0380017368.01.T01 AT2G47260 56.667 60 25 1 21 80 172 230 2.53e-20 83.6
MsG0380017368.01.T01 AT2G03340 51.250 80 33 4 1 80 398 471 2.66e-20 84.3
MsG0380017368.01.T01 AT2G03340 46.377 69 35 2 12 80 239 305 2.64e-15 70.1
MsG0380017368.01.T01 AT5G46350 46.753 77 35 3 4 80 169 239 3.89e-20 82.8
MsG0380017368.01.T01 AT4G31550 47.143 70 37 0 24 93 247 316 4.27e-20 82.8
MsG0380017368.01.T01 AT1G69310 48.052 77 34 3 4 80 133 203 4.49e-20 82.4
MsG0380017368.01.T01 AT1G69310 48.052 77 34 3 4 80 133 203 4.49e-20 82.4
MsG0380017368.01.T01 AT1G69310 48.052 77 34 3 4 80 133 203 4.49e-20 82.4
MsG0380017368.01.T01 AT4G31550 47.143 70 37 0 24 93 246 315 4.49e-20 82.8
MsG0380017368.01.T01 AT5G28650 56.897 58 25 0 24 81 263 320 5.01e-20 82.8
MsG0380017368.01.T01 AT2G23320 53.448 58 27 0 24 81 241 298 6.59e-20 82.4
MsG0380017368.01.T01 AT2G30590 56.140 57 25 0 24 80 314 370 7.44e-20 82.8
MsG0380017368.01.T01 AT2G38470 55.932 59 25 1 22 80 361 418 1.36e-19 82.4
MsG0380017368.01.T01 AT2G38470 51.724 58 26 2 23 80 184 239 2.65e-15 70.1
MsG0380017368.01.T01 AT1G69810 46.250 80 40 2 2 80 126 203 1.46e-19 81.3
MsG0380017368.01.T01 AT3G62340 55.738 61 26 1 20 80 115 174 1.47e-19 80.9
MsG0380017368.01.T01 AT1G69810 46.250 80 40 2 2 80 184 261 1.50e-19 82.0
MsG0380017368.01.T01 AT1G64000 54.237 59 26 1 22 80 113 170 1.68e-19 79.0
MsG0380017368.01.T01 AT3G01970 53.125 64 29 1 22 85 64 126 1.77e-19 77.8
MsG0380017368.01.T01 AT3G04670 53.448 58 27 0 24 81 263 320 2.30e-19 80.9
MsG0380017368.01.T01 AT4G24240 44.872 78 42 1 5 81 262 339 4.68e-19 80.1
MsG0380017368.01.T01 AT2G30250 50.685 73 33 3 8 80 315 384 5.68e-19 80.5
MsG0380017368.01.T01 AT2G30250 45.614 57 29 2 24 80 167 221 2.02e-11 58.9
MsG0380017368.01.T01 AT5G13080 52.542 59 27 1 22 80 66 123 5.77e-19 76.6
MsG0380017368.01.T01 AT3G01080 50.685 73 33 3 8 80 293 362 6.28e-19 80.5
MsG0380017368.01.T01 AT3G01080 47.541 61 30 2 24 84 168 226 8.07e-12 60.1
MsG0380017368.01.T01 AT3G01080 50.685 73 33 3 8 80 331 400 6.39e-19 80.5
MsG0380017368.01.T01 AT3G01080 47.541 61 30 2 24 84 206 264 7.87e-12 60.5
MsG0380017368.01.T01 AT5G41570 46.154 78 39 2 3 80 80 154 7.83e-19 77.0
MsG0380017368.01.T01 AT2G24570 51.562 64 29 1 24 87 244 305 8.55e-19 79.3
MsG0380017368.01.T01 AT5G64810 50.847 59 28 1 22 80 109 166 2.80e-18 75.9
MsG0380017368.01.T01 AT4G39410 46.575 73 36 2 22 92 222 293 1.11e-17 76.3
MsG0380017368.01.T01 AT1G29280 49.123 57 29 0 24 80 75 131 1.80e-17 75.1
MsG0380017368.01.T01 AT1G55600 55.172 58 25 1 23 80 307 363 1.89e-17 76.3
MsG0380017368.01.T01 AT2G44745 52.542 59 27 1 22 80 144 201 1.96e-17 74.3
MsG0380017368.01.T01 AT4G30935 50.877 57 27 1 24 80 332 387 5.23e-17 75.1
MsG0380017368.01.T01 AT2G46130 44.444 90 44 4 1 90 13 96 5.71e-17 70.5
MsG0380017368.01.T01 AT4G26440 52.542 59 27 1 22 80 371 428 6.50e-17 74.7
MsG0380017368.01.T01 AT4G26440 46.552 58 29 2 24 81 179 234 7.09e-12 60.5
MsG0380017368.01.T01 AT2G21900 50.847 59 28 1 22 80 108 165 8.39e-17 72.0
MsG0380017368.01.T01 AT2G37260 44.000 75 35 2 6 80 258 325 2.20e-16 72.8
MsG0380017368.01.T01 AT2G37260 53.448 58 25 2 24 81 86 141 4.03e-15 69.3
MsG0380017368.01.T01 AT2G37260 44.000 75 35 2 6 80 256 323 2.22e-16 72.8
MsG0380017368.01.T01 AT2G37260 53.448 58 25 2 24 81 84 139 4.17e-15 69.3
MsG0380017368.01.T01 AT2G37260 49.153 59 29 1 22 80 348 405 3.22e-16 72.8
MsG0380017368.01.T01 AT2G37260 53.448 58 25 2 24 81 166 221 4.28e-15 69.7
MsG0380017368.01.T01 AT2G34830 46.154 65 35 0 16 80 208 272 3.99e-16 72.4
MsG0380017368.01.T01 AT1G69310 46.753 77 31 4 4 80 133 199 4.00e-16 71.6
MsG0380017368.01.T01 AT2G34830 46.154 65 35 0 16 80 217 281 4.24e-16 72.4
MsG0380017368.01.T01 AT1G30650 46.154 65 35 0 16 80 210 274 5.81e-16 72.0
MsG0380017368.01.T01 AT3G58710 50.877 57 28 0 24 80 72 128 5.94e-16 70.9
MsG0380017368.01.T01 AT3G58710 50.877 57 28 0 24 80 71 127 6.13e-16 70.9
MsG0380017368.01.T01 AT5G52830 42.105 76 44 0 24 99 166 241 7.07e-16 71.6
MsG0380017368.01.T01 AT5G43290 44.615 65 35 1 16 80 107 170 1.28e-15 70.1
MsG0380017368.01.T01 AT4G01250 45.614 57 31 0 24 80 129 185 3.87e-15 68.9
MsG0380017368.01.T01 AT5G45050 47.368 57 30 0 24 80 1181 1237 3.00e-14 67.4
MsG0380017368.01.T01 AT5G45050 47.368 57 30 0 24 80 1153 1209 3.03e-14 67.4
MsG0380017368.01.T01 AT5G45050 47.368 57 30 0 24 80 1042 1098 3.36e-14 67.0
MsG0380017368.01.T01 AT4G23550 42.373 59 34 0 22 80 139 197 4.92e-14 66.2
MsG0380017368.01.T01 AT2G46400 42.466 73 38 2 8 78 91 161 2.05e-13 64.3
MsG0380017368.01.T01 AT2G46130 43.333 90 41 5 1 90 13 92 6.88e-13 59.7
MsG0380017368.01.T01 AT5G45260 38.961 77 45 1 24 98 1209 1285 8.27e-13 63.2
MsG0380017368.01.T01 AT4G12020 43.750 64 34 2 17 80 462 523 4.29e-12 61.2
MsG0380017368.01.T01 AT4G12020 43.750 64 34 2 17 80 462 523 4.29e-12 61.2
MsG0380017368.01.T01 AT4G12020 43.750 64 34 2 17 80 462 523 4.51e-12 61.2
MsG0380017368.01.T01 AT4G12020 43.750 64 34 2 17 80 462 523 4.60e-12 61.2
MsG0380017368.01.T01 AT4G12020 43.750 64 34 2 17 80 462 523 4.82e-12 60.8
MsG0380017368.01.T01 AT4G12020 43.750 64 34 2 17 80 462 523 4.82e-12 60.8
MsG0380017368.01.T01 AT4G12020 43.750 64 34 2 17 80 462 523 4.91e-12 60.8
MsG0380017368.01.T01 AT4G12020 43.750 64 34 2 17 80 395 456 5.01e-12 60.8
MsG0380017368.01.T01 AT4G12020 43.750 64 34 2 17 80 462 523 5.02e-12 60.8
MsG0380017368.01.T01 AT4G12020 43.750 64 34 2 17 80 462 523 5.12e-12 60.8
MsG0380017368.01.T01 AT4G12020 43.750 64 34 2 17 80 462 523 5.35e-12 60.8
MsG0380017368.01.T01 AT3G01080 47.541 61 30 2 24 84 206 264 7.57e-12 60.1
MsG0380017368.01.T01 AT1G66560 42.105 57 31 1 24 78 104 160 4.03e-11 57.8
MsG0380017368.01.T01 AT1G66550 34.667 75 47 1 6 78 86 160 5.09e-11 57.4
MsG0380017368.01.T01 AT1G66550 34.667 75 47 1 6 78 91 165 5.16e-11 57.4
MsG0380017368.01.T01 AT5G24110 35.065 77 48 1 4 78 94 170 9.05e-11 57.0

Find 38 sgRNAs with CRISPR-Local

Find 146 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCCTTTCTCTTTCGCGATAT+TGG 0.191286 3:+95383269 None:intergenic
GAACTAGTGAGTGACATTTC+AGG 0.307165 3:+95381317 None:intergenic
TTCAAGTGCTCCTTTGCTCC+TGG 0.357212 3:-95382885 MsG0380017368.01.T01:CDS
GGATATCAGTGGAGAAAATA+TGG 0.364647 3:-95382948 MsG0380017368.01.T01:CDS
TGTTAAAATAATTAAGAGAT+TGG 0.366898 3:+95382818 None:intergenic
GCACATGTGGTTCAGTTTCT+CGG 0.370673 3:+95383363 None:intergenic
GAAAATTGTATCAATAGGTT+TGG 0.376161 3:-95383236 MsG0380017368.01.T02:CDS
ACCAATATCGCGAAAGAGAA+AGG 0.387719 3:-95383270 MsG0380017368.01.T02:CDS
GTGTTGAAAATTGTATCAAT+AGG 0.392499 3:-95383241 MsG0380017368.01.T02:CDS
CTAGAGATAATCCCTCTCCT+AGG 0.467386 3:-95382914 MsG0380017368.01.T01:CDS
GCTGGAACTAAATTATATGT+AGG 0.476216 3:+95381274 None:intergenic
CTGGAACTAAATTATATGTA+GGG 0.478747 3:+95381275 None:intergenic
AGAACTTACTAAGCTGGCAT+TGG 0.495787 3:+95383106 None:intergenic
CACAGGGCAGCCAGGAGCAA+AGG 0.503671 3:+95382875 None:intergenic
AATTGTAGAACTTACTAAGC+TGG 0.507761 3:+95383100 None:intergenic
CTGGCTGCCCTGTGAAAAGA+AGG 0.511042 3:-95382866 MsG0380017368.01.T01:intron
TATGTGGTCACTAATATGCT+CGG 0.512756 3:+95381371 None:intergenic
TGTCTCCTCCTCAGTAGTAA+TGG 0.551953 3:+95383190 None:intergenic
ATGTGGTCACTAATATGCTC+GGG 0.561198 3:+95381372 None:intergenic
GACCTCGCCGAGAGTTTCCA+AGG 0.562692 3:-95383150 MsG0380017368.01.T01:CDS
GTTGTGCTCTCCTTCGTATG+TGG 0.572822 3:+95381355 None:intergenic
GAGCACTTGAAGTAAGCCCT+AGG 0.576521 3:+95382897 None:intergenic
ATCTGTACGCACAAGAACCT+TGG 0.586094 3:+95383133 None:intergenic
TAGAGATAATCCCTCTCCTA+GGG 0.588394 3:-95382913 MsG0380017368.01.T01:CDS
TTGAAGTAAGCCCTAGGAGA+GGG 0.594565 3:+95382903 None:intergenic
TTTCAGGTTGGTGATGCGCA+TGG 0.595445 3:+95381333 None:intergenic
GTATTGAAGTATGTGAAGGA+TGG 0.607747 3:-95382969 MsG0380017368.01.T01:intron
GCAGTATAATGTCGCACATG+TGG 0.612235 3:+95383350 None:intergenic
TTGGGTATTGAAGTATGTGA+AGG 0.631029 3:-95382973 MsG0380017368.01.T01:intron
CTTGAAGTAAGCCCTAGGAG+AGG 0.642278 3:+95382902 None:intergenic
ACAAGAACCTTGGAAACTCT+CGG 0.643388 3:+95383143 None:intergenic
ATGTGAAGGATGGATATCAG+TGG 0.648222 3:-95382959 MsG0380017368.01.T01:CDS
TGGAACTAAATTATATGTAG+GGG 0.651480 3:+95381276 None:intergenic
CAGCACCATTACTACTGAGG+AGG 0.656419 3:-95383195 MsG0380017368.01.T02:CDS
AACCTTGGAAACTCTCGGCG+AGG 0.657343 3:+95383148 None:intergenic
TAGTGAGTGACATTTCAGGT+TGG 0.685861 3:+95381321 None:intergenic
GAGCAGCACCATTACTACTG+AGG 0.711173 3:-95383198 MsG0380017368.01.T02:CDS
ATATTAGTGACCACATACGA+AGG 0.729115 3:-95381365 MsG0380017368.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAATTATATTAATTGTG+AGG - Chr3:95382912-95382931 MsG0380017368.01.T01:CDS 10.0%
!! AATAATAATTAACATAAAGA+GGG + Chr3:95383237-95383256 None:intergenic 10.0%
!! AATATAATAACAATATAGAT+TGG - Chr3:95382234-95382253 MsG0380017368.01.T01:intron 10.0%
!! TAATAATAATTAACATAAAG+AGG + Chr3:95383238-95383257 None:intergenic 10.0%
!! TCTTTATGTTAATTATTATT+AGG - Chr3:95383237-95383256 MsG0380017368.01.T02:CDS 10.0%
!! TTTATATAAAATAATGAGAA+AGG - Chr3:95382985-95383004 MsG0380017368.01.T01:intron 10.0%
!!! TATATAACATTTTTATACTT+AGG + Chr3:95382462-95382481 None:intergenic 10.0%
!! AATGTTATATATCAAATGAT+TGG - Chr3:95382471-95382490 MsG0380017368.01.T01:intron 15.0%
!! ATAATAAAGATATTAGTGTT+TGG - Chr3:95381625-95381644 MsG0380017368.01.T01:intron 15.0%
!! TGTTAAAATAATTAAGAGAT+TGG + Chr3:95381836-95381855 None:intergenic 15.0%
!!! ATGATTTTGAATTTTATTAG+TGG - Chr3:95382599-95382618 MsG0380017368.01.T01:intron 15.0%
!!! TGATTTTGAATTTTATTAGT+GGG - Chr3:95382600-95382619 MsG0380017368.01.T01:intron 15.0%
!! GCAAAAACATTTAATCAATA+AGG - Chr3:95382773-95382792 MsG0380017368.01.T01:intron 20.0%
!! GGTTTGAATATATAGAAAAA+TGG - Chr3:95382127-95382146 MsG0380017368.01.T01:intron 20.0%
!!! TGGTTACAAAATTTTATTAG+TGG - Chr3:95382671-95382690 MsG0380017368.01.T01:intron 20.0%
!!! TGGTTTTGAAATTTTATTAG+TGG - Chr3:95382651-95382670 MsG0380017368.01.T01:intron 20.0%
!!! TGTTGTCTTGATTTAATTTT+TGG - Chr3:95381596-95381615 MsG0380017368.01.T01:intron 20.0%
!!! TTGGTTACAAATTTTATTAG+TGG - Chr3:95382631-95382650 MsG0380017368.01.T01:intron 20.0%
!!! TTTTGCTTATTAGAAAACTA+AGG + Chr3:95382759-95382778 None:intergenic 20.0%
! AATAAAAAATCCCCCTTATT+TGG + Chr3:95382328-95382347 None:intergenic 25.0%
! GAAAATTGTATCAATAGGTT+TGG - Chr3:95381415-95381434 MsG0380017368.01.T01:intron 25.0%
! GTGTTGAAAATTGTATCAAT+AGG - Chr3:95381410-95381429 MsG0380017368.01.T01:intron 25.0%
! TAAACATTGTCAACCAAATA+AGG - Chr3:95381929-95381948 MsG0380017368.01.T01:intron 25.0%
! TGAAAAAAAGGAGAATTCTT+TGG - Chr3:95381965-95381984 MsG0380017368.01.T01:intron 25.0%
! TGATACCAATAGAATACATT+GGG - Chr3:95383175-95383194 MsG0380017368.01.T02:CDS 25.0%
! TTGATACCAATAGAATACAT+TGG - Chr3:95383174-95383193 MsG0380017368.01.T02:CDS 25.0%
!! ATAAAAAATCCCCCTTATTT+GGG + Chr3:95382327-95382346 None:intergenic 25.0%
!! ATTAAATACCTTCTTTTCAC+AGG + Chr3:95381796-95381815 None:intergenic 25.0%
!! TTAAATACCTTCTTTTCACA+GGG + Chr3:95381795-95381814 None:intergenic 25.0%
!!! AAAATACTAAGGCTTTGTTT+GGG - Chr3:95382071-95382090 MsG0380017368.01.T01:intron 25.0%
!!! AAGAATTCTCCTTTTTTTCA+AGG + Chr3:95381965-95381984 None:intergenic 25.0%
!!! AGAATTCTCCTTTTTTTCAA+GGG + Chr3:95381964-95381983 None:intergenic 25.0%
!!! CGAGATTGTAATTTTAACAA+AGG + Chr3:95383077-95383096 None:intergenic 25.0%
!!! TAAAATACTAAGGCTTTGTT+TGG - Chr3:95382070-95382089 MsG0380017368.01.T01:intron 25.0%
!!! TTATTAGTGGGTTTCTTTTT+TGG - Chr3:95382612-95382631 MsG0380017368.01.T01:intron 25.0%
!!! TTTTATACTTAGGCTTTGTT+GGG + Chr3:95382452-95382471 None:intergenic 25.0%
!!! TTTTTATACTTAGGCTTTGT+TGG + Chr3:95382453-95382472 None:intergenic 25.0%
AATTGTAGAACTTACTAAGC+TGG + Chr3:95381554-95381573 None:intergenic 30.0%
ATTCATGAAAACTTATCTCG+TGG - Chr3:95382845-95382864 MsG0380017368.01.T01:intron 30.0%
GGAACTCAAAAATTGTATTG+GGG + Chr3:95382304-95382323 None:intergenic 30.0%
GGGAACTCAAAAATTGTATT+GGG + Chr3:95382305-95382324 None:intergenic 30.0%
TAAAGCCCAATGTATTCTAT+TGG + Chr3:95383183-95383202 None:intergenic 30.0%
TGGAAGAAATAGAAGACATT+GGG + Chr3:95382384-95382403 None:intergenic 30.0%
TTACAATCTCGAATTCTTGT+TGG - Chr3:95383086-95383105 MsG0380017368.01.T01:intron 30.0%
TTCGTCATAGACCAAATTAT+TGG + Chr3:95382572-95382591 None:intergenic 30.0%
! CAAAATGTTTCGTGGAATTT+TGG - Chr3:95381876-95381895 MsG0380017368.01.T01:intron 30.0%
! CAAAATTCCACGAAACATTT+TGG + Chr3:95381878-95381897 None:intergenic 30.0%
! GATACAATTTTCAACACTCT+CGG + Chr3:95381407-95381426 None:intergenic 30.0%
! TAAAAAATCCCCCTTATTTG+GGG + Chr3:95382326-95382345 None:intergenic 30.0%
! TTCTTTGGTACACTTTTAGT+TGG - Chr3:95381980-95381999 MsG0380017368.01.T01:intron 30.0%
!! GAGATGCTGAATTTGTTTTT+GGG - Chr3:95381660-95381679 MsG0380017368.01.T01:intron 30.0%
!! TCTTTGGTACACTTTTAGTT+GGG - Chr3:95381981-95382000 MsG0380017368.01.T01:intron 30.0%
!! TGAGATGCTGAATTTGTTTT+TGG - Chr3:95381659-95381678 MsG0380017368.01.T01:intron 30.0%
AAGAAATAGAAGACATTGGG+AGG + Chr3:95382381-95382400 None:intergenic 35.0%
ACTCAAAAATTGTATTGGGG+AGG + Chr3:95382301-95382320 None:intergenic 35.0%
ATATTAGTGACCACATACGA+AGG - Chr3:95383286-95383305 MsG0380017368.01.T02:CDS 35.0%
ATTAAGTAGGAGTAGCTTCT+AGG - Chr3:95382014-95382033 MsG0380017368.01.T01:intron 35.0%
CTAACATGTCAAGTAGTACT+TGG - Chr3:95383114-95383133 MsG0380017368.01.T01:intron 35.0%
CTCAAAAATTGTATTGGGGA+GGG + Chr3:95382300-95382319 None:intergenic 35.0%
GAATTCCTCCCTTGAAAAAA+AGG - Chr3:95381953-95381972 MsG0380017368.01.T01:intron 35.0%
GACCAAATTATTGGAACCAA+CGG + Chr3:95382563-95382582 None:intergenic 35.0%
GGATATCAGTGGAGAAAATA+TGG - Chr3:95381703-95381722 MsG0380017368.01.T01:intron 35.0%
GGGGAACTCAAAAATTGTAT+TGG + Chr3:95382306-95382325 None:intergenic 35.0%
GGGTACGAGTTTAATTAAGT+AGG - Chr3:95382001-95382020 MsG0380017368.01.T01:intron 35.0%
GTATTGAAGTATGTGAAGGA+TGG - Chr3:95381682-95381701 MsG0380017368.01.T01:intron 35.0%
GTGGAAGAAATAGAAGACAT+TGG + Chr3:95382385-95382404 None:intergenic 35.0%
TATGTGGTCACTAATATGCT+CGG + Chr3:95383283-95383302 None:intergenic 35.0%
TTAGTCACCAAAATGTTTCG+TGG - Chr3:95381868-95381887 MsG0380017368.01.T01:intron 35.0%
TTGGAACCAACGGTATTATA+TGG + Chr3:95382553-95382572 None:intergenic 35.0%
! AAAAAATCCCCCTTATTTGG+GGG + Chr3:95382325-95382344 None:intergenic 35.0%
!! TACCGTTGGTTCCAATAATT+TGG - Chr3:95382558-95382577 MsG0380017368.01.T01:intron 35.0%
!! TTGGGTATTGAAGTATGTGA+AGG - Chr3:95381678-95381697 MsG0380017368.01.T01:intron 35.0%
!!! ATTCTCCTTTTTTTCAAGGG+AGG + Chr3:95381961-95381980 None:intergenic 35.0%
!!! TTTTGAGTTCCCCCAAATAA+GGG - Chr3:95382313-95382332 MsG0380017368.01.T01:intron 35.0%
!!! TTTTTGAGTTCCCCCAAATA+AGG - Chr3:95382312-95382331 MsG0380017368.01.T01:intron 35.0%
ACAAGAACCTTGGAAACTCT+CGG + Chr3:95381511-95381530 None:intergenic 40.0%
ACCAATATCGCGAAAGAGAA+AGG - Chr3:95381381-95381400 MsG0380017368.01.T01:CDS 40.0%
AGAACTTACTAAGCTGGCAT+TGG + Chr3:95381548-95381567 None:intergenic 40.0%
AGGGAGGAATTCTCCTTATT+TGG + Chr3:95381945-95381964 None:intergenic 40.0%
ATGTGAAGGATGGATATCAG+TGG - Chr3:95381692-95381711 MsG0380017368.01.T01:intron 40.0%
ATGTGGTCACTAATATGCTC+GGG + Chr3:95383282-95383301 None:intergenic 40.0%
GAACTAGTGAGTGACATTTC+AGG + Chr3:95383337-95383356 None:intergenic 40.0%
GGAAAAAAGGAAGGAACAAG+TGG + Chr3:95382404-95382423 None:intergenic 40.0%
TAGAGATAATCCCTCTCCTA+GGG - Chr3:95381738-95381757 MsG0380017368.01.T01:intron 40.0%
! AATTGTATTGGGGAGGGTTT+TGG + Chr3:95382294-95382313 None:intergenic 40.0%
! ATTGTATTGGGGAGGGTTTT+GGG + Chr3:95382293-95382312 None:intergenic 40.0%
! TAGTGAGTGACATTTCAGGT+TGG + Chr3:95383333-95383352 None:intergenic 40.0%
! TTTGAGTTCCCCCAAATAAG+GGG - Chr3:95382314-95382333 MsG0380017368.01.T01:intron 40.0%
!! TAAGGCTTTGTTTGGGAGTT+TGG - Chr3:95382078-95382097 MsG0380017368.01.T01:intron 40.0%
!! TGTAGGGGTTGTTTTCACTT+TGG + Chr3:95383363-95383382 None:intergenic 40.0%
!!! GAGGGTTTTGGAAAAAAGGA+AGG + Chr3:95382413-95382432 None:intergenic 40.0%
ACCAACGGTATTATATGGCG+AGG + Chr3:95382548-95382567 None:intergenic 45.0%
ATAGAAGACATTGGGAGGAG+AGG + Chr3:95382376-95382395 None:intergenic 45.0%
ATCTGTACGCACAAGAACCT+TGG + Chr3:95381521-95381540 None:intergenic 45.0%
CTAGAGATAATCCCTCTCCT+AGG - Chr3:95381737-95381756 MsG0380017368.01.T01:intron 45.0%
GCACATGTGGTTCAGTTTCT+CGG + Chr3:95381291-95381310 None:intergenic 45.0%
GCAGTATAATGTCGCACATG+TGG + Chr3:95381304-95381323 None:intergenic 45.0%
GCCTTTCTCTTTCGCGATAT+TGG + Chr3:95381385-95381404 None:intergenic 45.0%
TAGAAGACATTGGGAGGAGA+GGG + Chr3:95382375-95382394 None:intergenic 45.0%
TCCTCGCCATATAATACCGT+TGG - Chr3:95382544-95382563 MsG0380017368.01.T01:intron 45.0%
TGTCTCCTCCTCAGTAGTAA+TGG + Chr3:95381464-95381483 None:intergenic 45.0%
TTGAAGTAAGCCCTAGGAGA+GGG + Chr3:95381751-95381770 None:intergenic 45.0%
TTGAGTTCCCCCAAATAAGG+GGG - Chr3:95382315-95382334 MsG0380017368.01.T01:intron 45.0%
! CTTTGTTTGGGAGTTTGGAG+GGG - Chr3:95382083-95382102 MsG0380017368.01.T01:intron 45.0%
! GCTTTGTTGGGAGTTTAGAG+GGG + Chr3:95382440-95382459 None:intergenic 45.0%
! TTGTATTGGGGAGGGTTTTG+GGG + Chr3:95382292-95382311 None:intergenic 45.0%
!! AGGCTTTGTTGGGAGTTTAG+AGG + Chr3:95382442-95382461 None:intergenic 45.0%
!! GCTTTGTTTGGGAGTTTGGA+GGG - Chr3:95382082-95382101 MsG0380017368.01.T01:intron 45.0%
!! GGCTTTGTTGGGAGTTTAGA+GGG + Chr3:95382441-95382460 None:intergenic 45.0%
!!! AGGGGAGGGTTTTGGAAAAA+AGG + Chr3:95382417-95382436 None:intergenic 45.0%
!!! AATTAATATAATTTTTTTAG+AGG + Chr3:95382909-95382928 None:intergenic 5.0%
!!! TATTTTAATTTAAAATACTA+AGG - Chr3:95382060-95382079 MsG0380017368.01.T01:intron 5.0%
CAGCACCATTACTACTGAGG+AGG - Chr3:95381456-95381475 MsG0380017368.01.T01:intron 50.0%
CTTGAAGTAAGCCCTAGGAG+AGG + Chr3:95381752-95381771 None:intergenic 50.0%
GAGCACTTGAAGTAAGCCCT+AGG + Chr3:95381757-95381776 None:intergenic 50.0%
GAGCAGCACCATTACTACTG+AGG - Chr3:95381453-95381472 MsG0380017368.01.T01:intron 50.0%
GTTGTGCTCTCCTTCGTATG+TGG + Chr3:95383299-95383318 None:intergenic 50.0%
TGTTGGGAGTTTAGAGGGGA+GGG + Chr3:95382436-95382455 None:intergenic 50.0%
TTCAAGTGCTCCTTTGCTCC+TGG - Chr3:95381766-95381785 MsG0380017368.01.T01:intron 50.0%
TTGTTGGGAGTTTAGAGGGG+AGG + Chr3:95382437-95382456 None:intergenic 50.0%
TTTGGGAGTTTGGAGGGGAA+GGG - Chr3:95382088-95382107 MsG0380017368.01.T01:intron 50.0%
!! AAGGGAGGGGAGGTTTTGAT+GGG - Chr3:95382106-95382125 MsG0380017368.01.T01:intron 50.0%
!! GGCTTTGTTTGGGAGTTTGG+AGG - Chr3:95382081-95382100 MsG0380017368.01.T01:intron 50.0%
!! TGTATTGGGGAGGGTTTTGG+GGG + Chr3:95382291-95382310 None:intergenic 50.0%
!! TTTCAGGTTGGTGATGCGCA+TGG + Chr3:95383321-95383340 None:intergenic 50.0%
AACCTTGGAAACTCTCGGCG+AGG + Chr3:95381506-95381525 None:intergenic 55.0%
ACATTGGGAGGAGAGGGCTT+TGG + Chr3:95382369-95382388 None:intergenic 55.0%
CTGGCTGCCCTGTGAAAAGA+AGG - Chr3:95381785-95381804 MsG0380017368.01.T01:intron 55.0%
GTTGGGAGTTTAGAGGGGAG+GGG + Chr3:95382435-95382454 None:intergenic 55.0%
GTTTGGGAGTTTGGAGGGGA+AGG - Chr3:95382087-95382106 MsG0380017368.01.T01:intron 55.0%
! CTTCTTTTCACAGGGCAGCC+AGG + Chr3:95381787-95381806 None:intergenic 55.0%
!! GAAGGGAGGGGAGGTTTTGA+TGG - Chr3:95382105-95382124 MsG0380017368.01.T01:intron 55.0%
!!! AGGGTTTTGGGGGGTTATGG+AGG + Chr3:95382281-95382300 None:intergenic 55.0%
!!! GGGTTTTGGGGGGTTATGGA+GGG + Chr3:95382280-95382299 None:intergenic 55.0%
!!! GTATTGGGGAGGGTTTTGGG+GGG + Chr3:95382290-95382309 None:intergenic 55.0%
GACCTCGCCGAGAGTTTCCA+AGG - Chr3:95381501-95381520 MsG0380017368.01.T01:intron 60.0%
GAGTTTGGAGGGGAAGGGAG+GGG - Chr3:95382093-95382112 MsG0380017368.01.T01:intron 60.0%
GGAGTTTAGAGGGGAGGGGA+GGG + Chr3:95382431-95382450 None:intergenic 60.0%
GGAGTTTGGAGGGGAAGGGA+GGG - Chr3:95382092-95382111 MsG0380017368.01.T01:intron 60.0%
! TAGAGGGGAGGGGAGGGTTT+TGG + Chr3:95382425-95382444 None:intergenic 60.0%
! TTGGGAGGAGAGGGCTTTGG+AGG + Chr3:95382366-95382385 None:intergenic 60.0%
!!! GGGAGGGTTTTGGGGGGTTA+TGG + Chr3:95382284-95382303 None:intergenic 60.0%
CACAGGGCAGCCAGGAGCAA+AGG + Chr3:95381779-95381798 None:intergenic 65.0%
GGGAGTTTAGAGGGGAGGGG+AGG + Chr3:95382432-95382451 None:intergenic 65.0%
GGGAGTTTGGAGGGGAAGGG+AGG - Chr3:95382091-95382110 MsG0380017368.01.T01:intron 65.0%
TTTGGAGGGGAAGGGAGGGG+AGG - Chr3:95382096-95382115 MsG0380017368.01.T01:intron 65.0%
Chromosome Type Strat End Strand Name
Chr3 gene 95381286 95383387 95381286 ID=MsG0380017368.01;Name=MsG0380017368.01
Chr3 mRNA 95381286 95383174 95381286 ID=MsG0380017368.01.T01;Parent=MsG0380017368.01;Name=MsG0380017368.01.T01;_AED=0.37;_eAED=0.37;_QI=0|0|0|1|0|0|3|0|101
Chr3 exon 95381286 95381415 95381286 ID=MsG0380017368.01.T01:exon:1713;Parent=MsG0380017368.01.T01
Chr3 exon 95382867 95382982 95382867 ID=MsG0380017368.01.T01:exon:1712;Parent=MsG0380017368.01.T01
Chr3 exon 95383115 95383174 95383115 ID=MsG0380017368.01.T01:exon:1711;Parent=MsG0380017368.01.T01
Chr3 CDS 95383115 95383174 95383115 ID=MsG0380017368.01.T01:cds;Parent=MsG0380017368.01.T01
Chr3 CDS 95382867 95382982 95382867 ID=MsG0380017368.01.T01:cds;Parent=MsG0380017368.01.T01
Chr3 CDS 95381286 95381415 95381286 ID=MsG0380017368.01.T01:cds;Parent=MsG0380017368.01.T01
Chr3 mRNA 95382806 95383387 95382806 ID=MsG0380017368.01.T02;Parent=MsG0380017368.01;Name=MsG0380017368.01.T02;_AED=0.31;_eAED=0.31;_QI=0|0|0|1|0|0|2|0|149
Chr3 exon 95382806 95382982 95382806 ID=MsG0380017368.01.T02:exon:1715;Parent=MsG0380017368.01.T02
Chr3 exon 95383115 95383387 95383115 ID=MsG0380017368.01.T02:exon:1714;Parent=MsG0380017368.01.T02
Chr3 CDS 95383115 95383387 95383115 ID=MsG0380017368.01.T02:cds;Parent=MsG0380017368.01.T02
Chr3 CDS 95382806 95382982 95382806 ID=MsG0380017368.01.T02:cds;Parent=MsG0380017368.01.T02
Gene Sequence

>MsG0380017368.01.T02

AACCGAGAAACTGAACCACATGTGCGACATTATACTGCTTTGCGAAAGCATTTGAGTCAATTCAGTCACACAAAATTTGAAAATGAATTAGTATCACCAATATCGCGAAAGAGAAAGGCCGAGAGTGTTGAAAATTGTATCAATAGGTTTGGCTATGCTATTGCTGAGAGCAGCACCATTACTACTGAGGAGGAGACATTCAAACACAACAACATGACCTCGCCGAGAGTTTCCAAGGTTCTTGTGCGTACAGATGCATCCAATGCCAGCTTATATGTGAAGGATGGATATCAGTGGAGAAAATATGGTCAGAAAGTCACTAGAGATAATCCCTCTCCTAGGGCTTACTTCAAGTGCTCCTTTGCTCCTGGCTGCCCTGTGAAAAGAAGGTATTTAATTAATAGAAGTAGTAGTGCCAATCTCTTAATTATTTTAACAACAAAAAATTAG

>MsG0380017368.01.T01

ATGACCTCGCCGAGAGTTTCCAAGGTTCTTGTGCGTACAGATGCATCCAATGCCAGCTTATATGTGAAGGATGGATATCAGTGGAGAAAATATGGTCAGAAAGTCACTAGAGATAATCCCTCTCCTAGGGCTTACTTCAAGTGCTCCTTTGCTCCTGGCTGCCCTGTGAAAAGAAGGGTGCAAAGAAGTGTAGAAGACCCGAGCATATTAGTGACCACATACGAAGGAGAGCACAACCATGCGCATCACCAACCTGAAATGTCACTCACTAGTTCAAACCAAAGTGAAAACAACCCCTACATATAA
Protein sequence

>MsG0380017368.01.T02

NRETEPHVRHYTALRKHLSQFSHTKFENELVSPISRKRKAESVENCINRFGYAIAESSTITTEEETFKHNNMTSPRVSKVLVRTDASNASLYVKDGYQWRKYGQKVTRDNPSPRAYFKCSFAPGCPVKRRYLINRSSSANLLIILTTKN*

>MsG0380017368.01.T01

MTSPRVSKVLVRTDASNASLYVKDGYQWRKYGQKVTRDNPSPRAYFKCSFAPGCPVKRRVQRSVEDPSILVTTYEGEHNHAHHQPEMSLTSSNQSENNPYI*