AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0380017679.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380017679.01.T01 MTR_3g110240 70.724 608 38 8 77 548 59 662 0.0 801
MsG0380017679.01.T01 MTR_1g007150 58.966 619 105 13 94 572 75 684 0.0 664
MsG0380017679.01.T01 MTR_7g006030 54.167 600 131 11 106 565 4 599 0.0 599
MsG0380017679.01.T01 MTR_8g014050 52.932 614 139 13 99 572 88 691 0.0 576
MsG0380017679.01.T01 MTR_7g085540 52.261 597 139 11 109 568 117 704 0.0 572
MsG0380017679.01.T01 MTR_1g116210 51.144 612 151 13 96 568 70 672 0.0 555
MsG0380017679.01.T01 MTR_5g094390 83.333 84 5 1 1 84 2 76 7.18e-39 142
MsG0380017679.01.T01 MTR_5g094390 83.333 84 5 1 1 84 2 76 2.01e-37 141
MsG0380017679.01.T01 MTR_4g126010 35.648 216 93 4 139 311 9 221 4.97e-34 135
MsG0380017679.01.T01 MTR_1g042280 41.317 167 95 2 145 311 27 190 7.72e-34 131
MsG0380017679.01.T01 MTR_8g102930 35.135 222 96 5 133 311 5 221 1.84e-33 133
MsG0380017679.01.T01 MTR_1g042280 36.036 222 94 6 133 311 6 222 1.87e-33 133
MsG0380017679.01.T01 MTR_2g099670 34.259 216 96 4 139 311 9 221 7.18e-33 132
MsG0380017679.01.T01 MTR_6g087070 33.796 216 97 4 139 311 9 221 1.30e-32 130
MsG0380017679.01.T01 MTR_7g097160 33.054 239 110 5 139 330 9 244 2.18e-32 130
MsG0380017679.01.T01 MTR_1g069720 43.836 146 79 2 162 307 75 217 4.27e-32 129
MsG0380017679.01.T01 MTR_1g075870 33.028 218 98 5 133 307 6 218 5.73e-32 126
MsG0380017679.01.T01 MTR_2g039930 33.333 216 98 3 139 311 9 221 1.12e-31 128
MsG0380017679.01.T01 MTR_2g099670 42.000 150 84 2 162 311 23 169 1.32e-31 127
MsG0380017679.01.T01 MTR_1g075870 41.096 146 83 2 162 307 19 161 1.97e-31 124
MsG0380017679.01.T01 MTR_0492s0030 34.722 216 93 5 131 303 3 213 2.41e-31 125
MsG0380017679.01.T01 MTR_0543s0020 34.722 216 93 5 131 303 3 213 2.41e-31 125
MsG0380017679.01.T01 MTR_8g018310 34.259 216 95 6 139 311 9 220 3.03e-31 126
MsG0380017679.01.T01 MTR_8g018310 34.259 216 95 6 139 311 9 220 7.69e-31 126
MsG0380017679.01.T01 MTR_1g075870 33.028 218 98 5 133 307 6 218 8.15e-31 126
MsG0380017679.01.T01 MTR_3g110180 28.889 270 131 6 133 351 5 264 1.26e-30 125
MsG0380017679.01.T01 MTR_2g039930 41.958 143 80 2 169 311 1 140 1.72e-30 124
MsG0380017679.01.T01 MTR_3g110180 28.947 266 137 5 133 351 5 265 1.82e-30 124
MsG0380017679.01.T01 MTR_7g029020 78.261 69 15 0 1 69 1 69 6.58e-28 114
MsG0380017679.01.T01 MTR_1g004990 32.231 242 107 7 129 327 2 229 6.99e-28 116
MsG0380017679.01.T01 MTR_3g056010 75.362 69 17 0 1 69 1 69 1.20e-27 113
MsG0380017679.01.T01 MTR_3g056025 75.362 69 17 0 1 69 1 69 1.47e-27 113
MsG0380017679.01.T01 MTR_3g099940 71.831 71 19 1 1 70 1 71 3.70e-24 103
MsG0380017679.01.T01 MTR_0283s0050 68.333 60 19 0 10 69 7 66 2.08e-20 91.7
MsG0380017679.01.T01 MTR_5g097530 68.333 60 19 0 10 69 7 66 3.52e-20 91.7
MsG0380017679.01.T01 MTR_7g097160 43.137 102 53 2 233 330 25 125 4.73e-17 83.2
MsG0380017679.01.T01 MTR_1g116205 63.934 61 19 2 111 168 89 149 2.11e-15 74.7
MsG0380017679.01.T01 MTR_1g081330 63.158 57 21 0 10 66 8 64 1.20e-14 77.8
MsG0380017679.01.T01 MTR_3g076650 59.677 62 25 0 1 62 1 62 2.45e-14 76.6
MsG0380017679.01.T01 MTR_7g114680 63.636 55 20 0 12 66 10 64 2.85e-14 76.6
MsG0380017679.01.T01 MTR_1g103850 59.649 57 23 0 6 62 4 60 8.59e-14 75.1
MsG0380017679.01.T01 MTR_7g072860 57.143 56 24 0 15 70 17 72 2.46e-13 73.2
MsG0380017679.01.T01 MTR_7g072640 57.143 56 24 0 15 70 17 72 2.46e-13 73.2
MsG0380017679.01.T01 MTR_4g028830 53.571 56 26 0 15 70 13 68 2.03e-11 67.4
MsG0380017679.01.T01 MTR_8g027265 67.391 46 15 0 14 59 26 71 2.17e-11 67.4
MsG0380017679.01.T01 MTR_5g075220 53.571 56 26 0 11 66 12 67 3.80e-11 66.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380017679.01.T01 AT2G25760 54.245 636 128 15 81 572 57 673 0.0 618
MsG0380017679.01.T01 AT2G25760 54.147 639 127 16 81 572 57 676 0.0 615
MsG0380017679.01.T01 AT3G03940 51.471 612 149 11 96 568 95 697 0.0 576
MsG0380017679.01.T01 AT5G18190 51.485 606 147 10 100 566 89 686 0.0 573
MsG0380017679.01.T01 AT5G18190 51.485 606 147 10 100 566 89 686 0.0 573
MsG0380017679.01.T01 AT3G13670 49.921 635 151 12 75 548 56 684 0.0 570
MsG0380017679.01.T01 AT3G03930 50.996 251 73 7 359 568 43 284 9.04e-70 227
MsG0380017679.01.T01 AT5G43320 35.510 245 106 6 133 330 5 244 1.60e-35 137
MsG0380017679.01.T01 AT5G43320 35.510 245 106 6 133 330 5 244 1.60e-35 137
MsG0380017679.01.T01 AT5G43320 35.510 245 106 6 133 330 5 244 2.94e-35 139
MsG0380017679.01.T01 AT1G04440 34.694 245 108 6 133 330 5 244 2.06e-34 136
MsG0380017679.01.T01 AT3G23340 33.784 222 99 5 133 311 5 221 1.88e-33 133
MsG0380017679.01.T01 AT4G14340 32.653 245 113 5 133 330 11 250 2.22e-33 131
MsG0380017679.01.T01 AT4G26100 34.722 216 95 4 139 311 9 221 3.62e-33 132
MsG0380017679.01.T01 AT4G28540 43.750 144 78 2 168 311 85 225 8.38e-33 132
MsG0380017679.01.T01 AT4G14340 33.469 245 111 6 133 330 11 250 1.27e-32 131
MsG0380017679.01.T01 AT5G57015 35.185 216 94 5 139 311 9 221 1.35e-32 130
MsG0380017679.01.T01 AT1G03930 33.333 222 100 4 133 311 5 221 1.91e-32 130
MsG0380017679.01.T01 AT2G19470 34.906 212 92 4 139 307 9 217 2.22e-32 130
MsG0380017679.01.T01 AT5G44100 33.333 222 100 5 133 311 5 221 2.50e-32 130
MsG0380017679.01.T01 AT5G44100 33.333 222 100 5 133 311 5 221 2.50e-32 130
MsG0380017679.01.T01 AT4G28860 33.945 218 96 5 133 307 5 217 2.55e-32 129
MsG0380017679.01.T01 AT4G28880 34.404 218 95 5 133 307 5 217 2.78e-32 129
MsG0380017679.01.T01 AT4G28880 34.404 218 95 5 133 307 5 217 2.78e-32 129
MsG0380017679.01.T01 AT4G28880 34.404 218 95 5 133 307 5 217 2.78e-32 129
MsG0380017679.01.T01 AT4G28880 34.404 218 95 5 133 307 5 217 2.78e-32 129
MsG0380017679.01.T01 AT3G23340 39.521 167 98 2 145 311 44 207 4.00e-32 129
MsG0380017679.01.T01 AT4G28860 33.945 218 96 5 133 307 5 217 5.27e-32 128
MsG0380017679.01.T01 AT1G72710 33.019 212 95 5 139 307 9 216 8.23e-30 123
MsG0380017679.01.T01 AT4G08800 33.333 186 98 4 139 307 9 185 1.25e-26 110
MsG0380017679.01.T01 AT5G55560 79.688 64 13 0 5 68 10 73 2.20e-25 107
MsG0380017679.01.T01 AT3G22420 59.091 66 27 0 11 76 9 74 1.26e-16 83.6
MsG0380017679.01.T01 AT3G22420 59.091 66 27 0 11 76 9 74 1.33e-16 83.6
MsG0380017679.01.T01 AT3G22420 59.091 66 27 0 11 76 80 145 1.42e-16 84.0
MsG0380017679.01.T01 AT3G22420 59.091 66 27 0 11 76 9 74 1.43e-16 83.6
MsG0380017679.01.T01 AT3G22420 59.091 66 27 0 11 76 80 145 1.50e-16 83.6
MsG0380017679.01.T01 AT3G22420 59.091 66 27 0 11 76 9 74 1.59e-16 83.6
MsG0380017679.01.T01 AT3G48260 60.938 64 24 1 10 72 6 69 5.88e-15 78.2
MsG0380017679.01.T01 AT3G04910 67.273 55 18 0 12 66 10 64 2.05e-14 77.0
MsG0380017679.01.T01 AT3G51630 58.333 60 25 0 7 66 6 65 3.38e-13 72.8
MsG0380017679.01.T01 AT3G51630 58.333 60 25 0 7 66 6 65 3.38e-13 72.8
MsG0380017679.01.T01 AT5G28080 54.839 62 28 0 5 66 4 65 4.16e-13 72.4
MsG0380017679.01.T01 AT5G58350 64.444 45 16 0 16 60 9 53 4.58e-11 66.2

Find 160 sgRNAs with CRISPR-Local

Find 608 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTACCTCAATTCCTTCTTCT+TGG 0.192393 3:-99475820 None:intergenic
CCCATTCGGACCTTCTTCTT+TGG 0.219272 3:-99481698 None:intergenic
TGGCTTCTTGTGCTAGTCTT+TGG 0.253271 3:+99481934 MsG0380017679.01.T01:CDS
AAGCTTGGGAAGGGAGGATT+TGG 0.257494 3:+99478530 MsG0380017679.01.T01:CDS
TGTTTCACAGGAATGGATTA+TGG 0.259630 3:+99482150 MsG0380017679.01.T01:intron
ATCAACGCCCAGATGTATTT+AGG 0.259852 3:+99480655 MsG0380017679.01.T01:CDS
TGAGCTTCGTTCAAATGTTT+TGG 0.266422 3:+99484220 MsG0380017679.01.T01:CDS
GGCTTCTTGTGCTAGTCTTT+GGG 0.284395 3:+99481935 MsG0380017679.01.T01:CDS
ATATGCTTGGCTCTAGTCTA+TGG 0.295213 3:+99479210 MsG0380017679.01.T01:CDS
TGGCCACTGCTGGCACTAGA+TGG 0.300589 3:+99482481 MsG0380017679.01.T01:CDS
CCTCCTCAAATCAGATGTTC+AGG 0.307530 3:+99484262 MsG0380017679.01.T01:CDS
TAAGAAGAAGGCAGTGGTTA+GGG 0.314293 3:+99478155 MsG0380017679.01.T01:CDS
GCTCTAGTCTATGGGATGTT+TGG 0.316967 3:+99479219 MsG0380017679.01.T01:CDS
GGTTACCTTGGCAAGATATC+AGG 0.328436 3:+99480872 MsG0380017679.01.T01:CDS
TTCGGCTCCCGGAGCTTTAT+CGG 0.329884 3:-99478226 None:intergenic
ATGAATATAAATGTCTTATA+TGG 0.336511 3:+99484162 MsG0380017679.01.T01:CDS
TTTCTGGTTGATCTTGGATT+AGG 0.337171 3:+99480509 MsG0380017679.01.T01:CDS
AGAGGCTTTATTCTGAAGTT+AGG 0.342057 3:+99475893 MsG0380017679.01.T01:CDS
ACCAACCTTGTGAAGAAAAC+TGG 0.342759 3:-99482012 None:intergenic
TAGTCTTTGGGCACTCATTA+TGG 0.347322 3:+99481947 MsG0380017679.01.T01:CDS
ATGAAACAGGTGTGCTTATA+TGG 0.349972 3:+99484185 MsG0380017679.01.T01:CDS
ACACTAATCCACTGTGTTGC+TGG 0.363197 3:-99481725 None:intergenic
TTCCTATCTAATCTATATAA+TGG 0.369860 3:-99478509 None:intergenic
CTCCCTTCTTCTTCGGCTCC+CGG 0.370094 3:-99478237 None:intergenic
AGAACAAACCTAAATACATC+TGG 0.381852 3:-99480663 None:intergenic
TTGTTACAGGGAGAAAATAA+AGG 0.383335 3:+99480993 MsG0380017679.01.T01:intron
CTCATTATGGATGCTGGCAC+TGG 0.386456 3:+99481960 MsG0380017679.01.T01:CDS
TATAGATTAGATAGGAAGCT+TGG 0.395411 3:+99478515 MsG0380017679.01.T01:CDS
ATAAGAAGAAGGCAGTGGTT+AGG 0.397165 3:+99478154 MsG0380017679.01.T01:CDS
AGCACCACATACTAATAGTT+CGG 0.404380 3:-99475771 None:intergenic
AACTTCTTGCTTGGACCCTC+GGG 0.405644 3:+99480464 MsG0380017679.01.T01:CDS
CAAAGACTCCGAGGCATTTG+TGG 0.410838 3:+99475715 MsG0380017679.01.T01:CDS
AGTTGTACTCCCTTCTTCTT+CGG 0.412608 3:-99478244 None:intergenic
CATGGAACCAAGTGAAGTTA+AGG 0.417769 3:+99475843 MsG0380017679.01.T01:CDS
GGAGTCTTTGTCGGATGAAC+CGG 0.423531 3:-99475702 None:intergenic
AAGTTGTTTCTGGTTGATCT+TGG 0.425523 3:+99480503 MsG0380017679.01.T01:CDS
CTCCATTATATAGATTAGAT+AGG 0.426261 3:+99478507 MsG0380017679.01.T01:CDS
GGAATCAAAATCACCTTCTC+AGG 0.426563 3:-99478273 None:intergenic
ATGTCTTATATGGATGAAAC+AGG 0.427036 3:+99484172 MsG0380017679.01.T01:CDS
ATTGTTATGTCCCGTGGTGC+TGG 0.431009 3:+99482507 MsG0380017679.01.T01:CDS
CGACGCGTAGGAGCTGGTTC+TGG 0.431637 3:+99478569 MsG0380017679.01.T01:CDS
AAACTTCTTGCTTGGACCCT+CGG 0.431706 3:+99480463 MsG0380017679.01.T01:CDS
GATAGGAAGCTTGGGAAGGG+AGG 0.432226 3:+99478524 MsG0380017679.01.T01:CDS
TTCTTCGTGGTCGGTTACCT+TGG 0.433456 3:+99480860 MsG0380017679.01.T01:CDS
CAAAAGCAACACAAAGCTTC+GGG 0.436504 3:-99481050 None:intergenic
GTCACTGCTATGGCCACTGC+TGG 0.440107 3:+99482471 MsG0380017679.01.T01:CDS
AGCGTTTCTTGAGTTTCATC+AGG 0.442256 3:-99482767 None:intergenic
ACGCTTGTCTTCCTTCTTCG+TGG 0.445559 3:+99480847 MsG0380017679.01.T01:CDS
ACAAAAGCAACACAAAGCTT+CGG 0.446009 3:-99481051 None:intergenic
AAAATAAAAGCAGCTTGATC+AGG 0.446910 3:-99482722 None:intergenic
AAGCCTGAAAACTTCTTGCT+TGG 0.452042 3:+99480455 MsG0380017679.01.T01:CDS
GCACCACATACTAATAGTTC+GGG 0.452075 3:-99475770 None:intergenic
CGTTGGCGTGATAGTTCAAC+TGG 0.453748 3:+99480615 MsG0380017679.01.T01:CDS
ATCTAGGATGTCTACTGAAA+TGG 0.454067 3:+99479355 MsG0380017679.01.T01:intron
TTTACCTTAACATGAGTACT+AGG 0.455799 3:-99482806 None:intergenic
TATTACATCAGTGCCATAGC+TGG 0.456706 3:+99482190 MsG0380017679.01.T01:CDS
GTTGGCCGACGCGTAGGAGC+TGG 0.466210 3:+99478563 MsG0380017679.01.T01:CDS
AAAATCACCTTCTCAGGAAG+TGG 0.470398 3:-99478267 None:intergenic
TGGGCACTCATTATGGATGC+TGG 0.472875 3:+99481954 MsG0380017679.01.T01:CDS
AACGAAGCTCAGATGCCATC+AGG 0.475980 3:-99484208 None:intergenic
TTATATTCATCACAAATCTC+AGG 0.478006 3:-99484149 None:intergenic
ACTGATCCAACTGGTAGTTA+TGG 0.478422 3:+99475740 MsG0380017679.01.T01:CDS
AGCTTGGGAAGGGAGGATTT+GGG 0.483807 3:+99478531 MsG0380017679.01.T01:CDS
GGAAGACAAGCGTGTAAGCA+AGG 0.490386 3:-99480837 None:intergenic
ATAGATTAGATAGGAAGCTT+GGG 0.491550 3:+99478516 MsG0380017679.01.T01:CDS
CTCTGTAAATCCAGCACCAC+GGG 0.494784 3:-99482517 None:intergenic
TTCATCATCATCCTCTTCCA+TGG 0.494964 3:-99481672 None:intergenic
GTGTTGCTGGCTGACCCATT+CGG 0.496471 3:-99481712 None:intergenic
CAACCTGAACATCTGATTTG+AGG 0.501381 3:-99484265 None:intergenic
TTAGATAGGAAGCTTGGGAA+GGG 0.503149 3:+99478521 MsG0380017679.01.T01:CDS
CGTAGTGCCGATAAAGCTCC+GGG 0.503731 3:+99478219 MsG0380017679.01.T01:CDS
GCTCCGGGAGCCGAAGAAGA+AGG 0.504739 3:+99478234 MsG0380017679.01.T01:CDS
AGAAGTTCCTTAACTTCACT+TGG 0.505019 3:-99475850 None:intergenic
CCGTAGTGCCGATAAAGCTC+CGG 0.505206 3:+99478218 MsG0380017679.01.T01:CDS
GGAAGGAGAGAATAAGAAGA+AGG 0.510183 3:+99478143 MsG0380017679.01.T01:CDS
ATTAGATAGGAAGCTTGGGA+AGG 0.514540 3:+99478520 MsG0380017679.01.T01:CDS
ATAAAGCCTCTCATCATAGC+AGG 0.519279 3:-99475881 None:intergenic
TACAAACTGCCGGAAGGTGC+AGG 0.520338 3:-99481074 None:intergenic
AAATGCCTCGGAGTCTTTGT+CGG 0.523588 3:-99475711 None:intergenic
CTTCTTCTTGGTCGAATGCA+CGG 0.524060 3:-99475808 None:intergenic
TTGTCTTCCTTCTTCGTGGT+CGG 0.524778 3:+99480851 MsG0380017679.01.T01:CDS
GCTATGGATGAGTACGATAG+TGG 0.525051 3:+99478192 MsG0380017679.01.T01:CDS
CTTCGATGAATACCTTCACT+AGG 0.528484 3:-99482659 None:intergenic
TTCTCATCAGGGGTTCCCGA+GGG 0.529311 3:-99480479 None:intergenic
GGATTTGGGCAAGTCTATGT+TGG 0.531558 3:+99478545 MsG0380017679.01.T01:CDS
GAATACCTTCACTAGGGTAC+AGG 0.532543 3:-99482652 None:intergenic
CCAAAGAAGAAGGTCCGAAT+GGG 0.533192 3:+99481698 MsG0380017679.01.T01:CDS
TAATTACAGATTCAAGTTGG+TGG 0.534253 3:+99478482 MsG0380017679.01.T01:intron
AAGAAGGAATTGAGGTAGCA+TGG 0.534488 3:+99475825 MsG0380017679.01.T01:CDS
AGGACGATTGACCATGGAAG+AGG 0.534909 3:+99481661 MsG0380017679.01.T01:CDS
TCTTAATTACAGATTCAAGT+TGG 0.538540 3:+99478479 MsG0380017679.01.T01:intron
TATGCTTGGCTCTAGTCTAT+GGG 0.539645 3:+99479211 MsG0380017679.01.T01:CDS
ATCAGTTTCCACAAATGCCT+CGG 0.540566 3:-99475723 None:intergenic
AGCTGGTTCTGGTGCCGTTG+AGG 0.543472 3:+99478580 MsG0380017679.01.T01:CDS
GGTTTCTAGAGAGGAAGCTA+TGG 0.545782 3:+99478176 MsG0380017679.01.T01:CDS
TGGTGCTGGATTTACAGAGC+AGG 0.546908 3:+99482521 MsG0380017679.01.T01:CDS
CATTGTAAAAGAAATGAAGA+TGG 0.547733 3:+99481894 MsG0380017679.01.T01:CDS
GAGAGATTGAAAGAAGAGGA+AGG 0.548043 3:+99478126 MsG0380017679.01.T01:CDS
GGCCACTGCTGGCACTAGAT+GGG 0.549197 3:+99482482 MsG0380017679.01.T01:CDS
AGAGAATAAGAAGAAGGCAG+TGG 0.549582 3:+99478149 MsG0380017679.01.T01:CDS
AAGGTAACCGACCACGAAGA+AGG 0.552994 3:-99480858 None:intergenic
GTGAAGGTATTCATCGAAGG+TGG 0.556433 3:+99482663 MsG0380017679.01.T01:CDS
TTTCTCATCAGGGGTTCCCG+AGG 0.557461 3:-99480480 None:intergenic
CGTGCATTCGACCAAGAAGA+AGG 0.558460 3:+99475809 MsG0380017679.01.T01:CDS
CTCCGGGAGCCGAAGAAGAA+GGG 0.558776 3:+99478235 MsG0380017679.01.T01:CDS
TGATGAACAACCAAAGAAGA+AGG 0.560213 3:+99481688 MsG0380017679.01.T01:CDS
AGTGGTTAGGGTTTCTAGAG+AGG 0.560234 3:+99478167 MsG0380017679.01.T01:CDS
AGGAATGGATTATGGAACAG+TGG 0.562856 3:+99482158 MsG0380017679.01.T01:intron
AGTAGAGAGATTGAAAGAAG+AGG 0.566314 3:+99478122 MsG0380017679.01.T01:CDS
TATCTACCATAACTACCAGT+TGG 0.567118 3:-99475746 None:intergenic
GCTAGTGTGCATGCACATCT+TGG 0.567152 3:+99480781 MsG0380017679.01.T01:CDS
AAGTAGCAGGAGAGATGACT+TGG 0.570146 3:+99480810 MsG0380017679.01.T01:CDS
TAGAGAAGATGCATTGTAGA+GGG 0.572443 3:+99479411 MsG0380017679.01.T01:CDS
ACCAAAGAAGAAGGTCCGAA+TGG 0.576715 3:+99481697 MsG0380017679.01.T01:CDS
GTTTCTTGAGTTTCATCAGG+TGG 0.578812 3:-99482764 None:intergenic
ACACAAAGCTTCGGGTGAAG+TGG 0.580070 3:-99481042 None:intergenic
ACACAGGTCATGGATATGCT+TGG 0.581027 3:+99479197 MsG0380017679.01.T01:intron
TGTGTGGGAAAGCCGCTCAT+CGG 0.582610 3:-99481873 None:intergenic
GAACAAACCTAAATACATCT+GGG 0.586854 3:-99480662 None:intergenic
GGAATGGATTATGGAACAGT+GGG 0.588580 3:+99482159 MsG0380017679.01.T01:intron
GTCTATGTTGGCCGACGCGT+AGG 0.589738 3:+99478557 MsG0380017679.01.T01:CDS
TTTGTGGAAACTGATCCAAC+TGG 0.590773 3:+99475731 MsG0380017679.01.T01:CDS
TACAACTCCACTTCCTGAGA+AGG 0.591492 3:+99478260 MsG0380017679.01.T01:CDS
ATCTTGGTAGAACAAGTAGC+AGG 0.592624 3:+99480797 MsG0380017679.01.T01:CDS
TTAGAGAAGATGCATTGTAG+AGG 0.593386 3:+99479410 MsG0380017679.01.T01:CDS
CGACCAAGAAGAAGGAATTG+AGG 0.599987 3:+99475817 MsG0380017679.01.T01:CDS
GTTGATCATAATCAACATGA+AGG 0.605161 3:-99480638 None:intergenic
GATTTCCTGTACCCTAGTGA+AGG 0.606757 3:+99482647 MsG0380017679.01.T01:CDS
TATCCCGAACTATTAGTATG+TGG 0.610295 3:+99475767 MsG0380017679.01.T01:CDS
TGAAGGTATTCATCGAAGGT+GGG 0.610628 3:+99482664 MsG0380017679.01.T01:CDS
TAGGATGTCTACTGAAATGG+TGG 0.612266 3:+99479358 MsG0380017679.01.T01:intron
CCCGTTACTAGCTCCAGCTA+TGG 0.614186 3:-99482203 None:intergenic
AAAGAGAGGACGATTGACCA+TGG 0.622958 3:+99481655 MsG0380017679.01.T01:CDS
TTCGATGAATACCTTCACTA+GGG 0.624580 3:-99482658 None:intergenic
GGTGGCATGTATTGCAATCG+AGG 0.627258 3:+99479376 MsG0380017679.01.T01:CDS
CCGGAGCTTTATCGGCACTA+CGG 0.627559 3:-99478218 None:intergenic
ATTACAATGTGGCCGATGAG+CGG 0.631315 3:+99481861 MsG0380017679.01.T01:CDS
TGCCCATCTAGTGCCAGCAG+TGG 0.632198 3:-99482484 None:intergenic
TGTTGTTGCAGATATGTGCA+TGG 0.634497 3:+99480425 MsG0380017679.01.T01:intron
GAAGACAAGCGTGTAAGCAA+GGG 0.638778 3:-99480836 None:intergenic
TTGCAGCAGTTGCAGTAATG+CGG 0.640610 3:-99482697 None:intergenic
CTAGTGAAGGTATTCATCGA+AGG 0.644295 3:+99482660 MsG0380017679.01.T01:CDS
CCTGAACATCTGATTTGAGG+AGG 0.645543 3:-99484262 None:intergenic
ATATTCTACAAACTGCCGGA+AGG 0.647657 3:-99481080 None:intergenic
GATAACCTGATATCTTGCCA+AGG 0.648067 3:-99480877 None:intergenic
TGGGCAATTGTTATGTCCCG+TGG 0.648130 3:+99482501 MsG0380017679.01.T01:CDS
TACTAGGAAAATCAGACGTG+CGG 0.651938 3:-99482790 None:intergenic
TGGTTTATTTATTAGCAGTG+TGG 0.653080 3:+99481914 MsG0380017679.01.T01:CDS
GATGAACCTGCTATGATGAG+AGG 0.666383 3:+99475875 MsG0380017679.01.T01:CDS
AAACACCGTACATACCTCAA+CGG 0.667251 3:-99478594 None:intergenic
TGTCAGGTTGGACAAAAGAG+AGG 0.668670 3:+99481641 MsG0380017679.01.T01:intron
ATGGATGAGTACGATAGTGG+TGG 0.670453 3:+99478195 MsG0380017679.01.T01:CDS
CAGAACCAGCTCCTACGCGT+CGG 0.671406 3:-99478568 None:intergenic
GCTCTGTAAATCCAGCACCA+CGG 0.673158 3:-99482518 None:intergenic
GGTGTGCTTATATGGCCTGA+TGG 0.683329 3:+99484193 MsG0380017679.01.T01:CDS
GATGAACCGGAGTTAACACT+CGG 0.701668 3:-99475689 None:intergenic
TAGATGCCGAGTGTTAACTC+CGG 0.702403 3:+99475683 None:intergenic
TTCATCCGACAAAGACTCCG+AGG 0.705998 3:+99475706 MsG0380017679.01.T01:CDS
TGGGTCAGCCAGCAACACAG+TGG 0.714696 3:+99481717 MsG0380017679.01.T01:CDS
GCGTAGGTATCATTACAATG+TGG 0.721199 3:+99481850 MsG0380017679.01.T01:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAACTTTATAAAATGTA+AGG + Chr3:99478719-99478738 MsG0380017679.01.T01:intron 10.0%
!! AAAAACTTTATAAAATGTAA+GGG + Chr3:99478720-99478739 MsG0380017679.01.T01:intron 10.0%
!! ATAATAAATATAATATAACC+AGG - Chr3:99479450-99479469 None:intergenic 10.0%
!! TTATTCCTTATATAATAATT+TGG - Chr3:99477588-99477607 None:intergenic 10.0%
!! TTATTTATGCAAAAATAAAT+CGG + Chr3:99479659-99479678 MsG0380017679.01.T01:intron 10.0%
!!! AAGTTTTTTAATAAAGTAAT+GGG + Chr3:99479134-99479153 MsG0380017679.01.T01:intron 10.0%
!!! ATATATAGATTTTATTCATT+AGG + Chr3:99477427-99477446 MsG0380017679.01.T01:intron 10.0%
!!! TAAGTTTTTTAATAAAGTAA+TGG + Chr3:99479133-99479152 MsG0380017679.01.T01:intron 10.0%
!!! TATATAGATTTTATTCATTA+GGG + Chr3:99477428-99477447 MsG0380017679.01.T01:intron 10.0%
!!! TGAATTTTTTAATTTTGTAA+GGG + Chr3:99478669-99478688 MsG0380017679.01.T01:intron 10.0%
!!! TTGATATTTAGTTTTTTTTA+AGG - Chr3:99477308-99477327 None:intergenic 10.0%
!!! TTTTAGATAAAAAAATCTTT+TGG - Chr3:99477513-99477532 None:intergenic 10.0%
!!! TTTTTTTTTGCTTATAATTT+GGG - Chr3:99481267-99481286 None:intergenic 10.0%
!!! TTTTTTTTTTGCTTATAATT+TGG - Chr3:99481268-99481287 None:intergenic 10.0%
!! ATGAATATAAATGTCTTATA+TGG + Chr3:99484162-99484181 MsG0380017679.01.T01:CDS 15.0%
!! TAAGACCAAATTATTATATA+AGG + Chr3:99477580-99477599 MsG0380017679.01.T01:intron 15.0%
!! TATTTAAATCAATGTATGTA+TGG + Chr3:99480707-99480726 MsG0380017679.01.T01:intron 15.0%
!! TTGTAGAACAATAAAATATT+CGG - Chr3:99476753-99476772 None:intergenic 15.0%
!!! AGTTTTTTAATAAAGTAATG+GGG + Chr3:99479135-99479154 MsG0380017679.01.T01:intron 15.0%
!!! AGTTTTTTTTGCTTATAATT+TGG + Chr3:99481541-99481560 MsG0380017679.01.T01:intron 15.0%
!!! ATATAATAATTTGGTCTTAA+AGG - Chr3:99477579-99477598 None:intergenic 15.0%
!!! CATATTTTTTGTAAATGTTT+TGG + Chr3:99479296-99479315 MsG0380017679.01.T01:intron 15.0%
!!! CTGAATTTTTTAATTTTGTA+AGG + Chr3:99478668-99478687 MsG0380017679.01.T01:intron 15.0%
!!! GATGTAAAAATAATTTGTAT+TGG + Chr3:99481372-99481391 MsG0380017679.01.T01:intron 15.0%
!!! GTTTTTTTTGCTTATAATTT+GGG + Chr3:99481542-99481561 MsG0380017679.01.T01:intron 15.0%
!!! TAATTATTTTTGTTTGATGA+TGG + Chr3:99483290-99483309 MsG0380017679.01.T01:intron 15.0%
!!! TACATACATTGATTTAAATA+AGG - Chr3:99480707-99480726 None:intergenic 15.0%
!!! TATCTATATATTTCTAACAT+TGG - Chr3:99480320-99480339 None:intergenic 15.0%
!!! TATTTGAAATCAATGTTATT+AGG + Chr3:99476720-99476739 MsG0380017679.01.T01:intron 15.0%
!!! TTAATTTTGTTGTTTTGTAT+AGG + Chr3:99476852-99476871 MsG0380017679.01.T01:intron 15.0%
!!! TTGTTACATAATATTTTAGT+TGG + Chr3:99478692-99478711 MsG0380017679.01.T01:intron 15.0%
!! AAAATATAGAAAGTCAAAAC+TGG - Chr3:99481829-99481848 None:intergenic 20.0%
!! AAATATAGAAAGTCAAAACT+GGG - Chr3:99481828-99481847 None:intergenic 20.0%
!! AACAGTAATTATTATGTTGA+AGG + Chr3:99483265-99483284 MsG0380017679.01.T01:intron 20.0%
!! AAGAACAAAAACAAATTTGA+GGG - Chr3:99480227-99480246 None:intergenic 20.0%
!! ACAATCGTCATTTAAAAAAA+TGG - Chr3:99477029-99477048 None:intergenic 20.0%
!! ACAATGTATAATGAGATATT+AGG - Chr3:99477819-99477838 None:intergenic 20.0%
!! ACCATAAAATTAAGCATAAT+TGG - Chr3:99483680-99483699 None:intergenic 20.0%
!! ATAAAATTAAGCATAATTGG+AGG - Chr3:99483677-99483696 None:intergenic 20.0%
!! ATCGAACAATTCATTATTTA+TGG - Chr3:99477159-99477178 None:intergenic 20.0%
!! ATTCTACAAGAAATTTATCA+TGG - Chr3:99483063-99483082 None:intergenic 20.0%
!! CAATGTATAATGAGATATTA+GGG - Chr3:99477818-99477837 None:intergenic 20.0%
!! TAAAATTAAGCATAATTGGA+GGG - Chr3:99483676-99483695 None:intergenic 20.0%
!! TCACAAAAACAAAAACTATA+AGG - Chr3:99476276-99476295 None:intergenic 20.0%
!! TCTTGATGCATTATATATTT+AGG + Chr3:99482264-99482283 MsG0380017679.01.T01:intron 20.0%
!! TGGTATCAATCTATATATAA+AGG - Chr3:99477493-99477512 None:intergenic 20.0%
!! TTATTTAATCGTACGAAAAA+TGG + Chr3:99477614-99477633 MsG0380017679.01.T01:intron 20.0%
!! TTCCTATCTAATCTATATAA+TGG - Chr3:99478512-99478531 None:intergenic 20.0%
!!! AAAATCATATGTTTTTTGTC+TGG + Chr3:99476518-99476537 MsG0380017679.01.T01:intron 20.0%
!!! AAACCTTTTTGCTTATAATA+TGG + Chr3:99481505-99481524 MsG0380017679.01.T01:intron 20.0%
!!! AAACTTTCTTTTTGAACTTA+TGG + Chr3:99483719-99483738 MsG0380017679.01.T01:intron 20.0%
!!! AAATATTGTAGTTTGTAGTA+TGG + Chr3:99481314-99481333 MsG0380017679.01.T01:intron 20.0%
!!! AACCTTTTTGCTTATAATAT+GGG + Chr3:99481506-99481525 MsG0380017679.01.T01:intron 20.0%
!!! AACTATGTATTTGTTTCTTT+GGG + Chr3:99483581-99483600 MsG0380017679.01.T01:intron 20.0%
!!! AATAAACAAACTTTGCTTTT+AGG + Chr3:99476771-99476790 MsG0380017679.01.T01:intron 20.0%
!!! AGTTTTGACTTTCTATATTT+TGG + Chr3:99481828-99481847 MsG0380017679.01.T01:intron 20.0%
!!! GATATGTATTTTGCATAATT+TGG - Chr3:99481133-99481152 None:intergenic 20.0%
!!! GTTTTTTAATAAAGTAATGG+GGG + Chr3:99479136-99479155 MsG0380017679.01.T01:intron 20.0%
!!! TATTTGATATATTTTTCTGC+AGG + Chr3:99482883-99482902 MsG0380017679.01.T01:intron 20.0%
!!! TCCAATTATGCTTAATTTTA+TGG + Chr3:99483676-99483695 MsG0380017679.01.T01:intron 20.0%
!!! TTATGAAATTGTTTGTTACA+GGG + Chr3:99480981-99481000 MsG0380017679.01.T01:intron 20.0%
!!! TTTTACTAAATTAAGTGTTG+TGG + Chr3:99479752-99479771 MsG0380017679.01.T01:intron 20.0%
!!! TTTTTCTCAAGACATAAATA+TGG + Chr3:99483604-99483623 MsG0380017679.01.T01:intron 20.0%
! AAAATTAAGCATAATTGGAG+GGG - Chr3:99483675-99483694 None:intergenic 25.0%
! AATTGGAAAAGTAAATTACC+TGG - Chr3:99476188-99476207 None:intergenic 25.0%
! ACAATGAATACATGAAAATC+AGG - Chr3:99482840-99482859 None:intergenic 25.0%
! ATAATGAATTGTTCGATTCT+AGG + Chr3:99477162-99477181 MsG0380017679.01.T01:intron 25.0%
! ATATCGCATCTATTAGTTAT+GGG + Chr3:99482927-99482946 MsG0380017679.01.T01:intron 25.0%
! ATCAAACAATTGAGTTCAAA+TGG + Chr3:99477123-99477142 MsG0380017679.01.T01:intron 25.0%
! ATCATTCTGTGATTATGATA+GGG + Chr3:99480050-99480069 MsG0380017679.01.T01:intron 25.0%
! ATCCTAATCCTAATTAGATA+CGG + Chr3:99477552-99477571 MsG0380017679.01.T01:intron 25.0%
! ATTTGATTGAGATACAGTAA+TGG - Chr3:99480025-99480044 None:intergenic 25.0%
! CAAAGAAACAAATACATAGT+TGG - Chr3:99483582-99483601 None:intergenic 25.0%
! CATTGTAAAAGAAATGAAGA+TGG + Chr3:99481894-99481913 MsG0380017679.01.T01:CDS 25.0%
! CTCCATTATATAGATTAGAT+AGG + Chr3:99478507-99478526 MsG0380017679.01.T01:CDS 25.0%
! GAAGAACAAAAACAAATTTG+AGG - Chr3:99480228-99480247 None:intergenic 25.0%
! GATGCATTATATATTTAGGA+TGG + Chr3:99482268-99482287 MsG0380017679.01.T01:intron 25.0%
! GATTCTGTATATCATATTCT+TGG + Chr3:99480739-99480758 MsG0380017679.01.T01:intron 25.0%
! TATATCGCATCTATTAGTTA+TGG + Chr3:99482926-99482945 MsG0380017679.01.T01:intron 25.0%
! TATCATTCTGTGATTATGAT+AGG + Chr3:99480049-99480068 MsG0380017679.01.T01:intron 25.0%
! TATGAAGGATATAGTTTCTT+AGG + Chr3:99483640-99483659 MsG0380017679.01.T01:intron 25.0%
! TATGCAAAAATAAATCGGTT+GGG + Chr3:99479664-99479683 MsG0380017679.01.T01:intron 25.0%
! TCTTAATTACAGATTCAAGT+TGG + Chr3:99478479-99478498 MsG0380017679.01.T01:intron 25.0%
! TTATATTCATCACAAATCTC+AGG - Chr3:99484152-99484171 None:intergenic 25.0%
! TTATGCAAAAATAAATCGGT+TGG + Chr3:99479663-99479682 MsG0380017679.01.T01:intron 25.0%
! TTTAAGTGGATCAACAAAAA+TGG + Chr3:99482433-99482452 MsG0380017679.01.T01:intron 25.0%
! TTTAATTAGGGCTAAAATGT+TGG + Chr3:99477457-99477476 MsG0380017679.01.T01:intron 25.0%
! TTTACTAACAGATTGTCTAT+GGG + Chr3:99479486-99479505 MsG0380017679.01.T01:intron 25.0%
! TTTCTATGAAACTTATTCCA+AGG - Chr3:99481352-99481371 None:intergenic 25.0%
!! AAATACATATCCCTTTTTGA+TGG + Chr3:99481142-99481161 MsG0380017679.01.T01:intron 25.0%
!! AATTGCATTTAATTTCTCCT+TGG + Chr3:99481439-99481458 MsG0380017679.01.T01:intron 25.0%
!! ATATTTTTCTGCAGGAAAAA+TGG + Chr3:99482891-99482910 MsG0380017679.01.T01:intron 25.0%
!! ATCAATGTATGTATGGTTTT+TGG + Chr3:99480714-99480733 MsG0380017679.01.T01:intron 25.0%
!! CAACTATGTATTTGTTTCTT+TGG + Chr3:99483580-99483599 MsG0380017679.01.T01:intron 25.0%
!! CTTATGAAATTGTTTGTTAC+AGG + Chr3:99480980-99480999 MsG0380017679.01.T01:intron 25.0%
!! GATAATTTTTGTCATGTGTT+AGG + Chr3:99478434-99478453 MsG0380017679.01.T01:intron 25.0%
!! TATTTTTCTGCAGGAAAAAT+GGG + Chr3:99482892-99482911 MsG0380017679.01.T01:intron 25.0%
!! TCATTTCTTTTACAATGTGT+GGG - Chr3:99481891-99481910 None:intergenic 25.0%
!! TTAGATCTTTTGTGTCAATT+GGG + Chr3:99483208-99483227 MsG0380017679.01.T01:intron 25.0%
!! TTCATTTCTTTTACAATGTG+TGG - Chr3:99481892-99481911 None:intergenic 25.0%
!! TTTTTGCTTATAATTTGGGA+CGG + Chr3:99481546-99481565 MsG0380017679.01.T01:intron 25.0%
!! TTTTTGTTGATCCACTTAAA+TGG - Chr3:99482433-99482452 None:intergenic 25.0%
!!! AAATTCTTTTGATTTAGCTC+TGG + Chr3:99479702-99479721 MsG0380017679.01.T01:intron 25.0%
!!! TATGGTTTTTTTGTTATCCT+TGG + Chr3:99481332-99481351 MsG0380017679.01.T01:intron 25.0%
!!! TCTAACCTTAGTTCTTTTTT+CGG + Chr3:99479332-99479351 MsG0380017679.01.T01:intron 25.0%
!!! TTTTTTCTCTCTGAAATAGA+GGG + Chr3:99477244-99477263 MsG0380017679.01.T01:intron 25.0%
AAAAAATTCAGACACCCAAA+TGG - Chr3:99478659-99478678 None:intergenic 30.0%
AAAATAAAAGCAGCTTGATC+AGG - Chr3:99482725-99482744 None:intergenic 30.0%
AAATAAATGTTGCTCAACCT+CGG - Chr3:99479645-99479664 None:intergenic 30.0%
AAATCATGAATCTGTTTCAC+AGG + Chr3:99482138-99482157 MsG0380017679.01.T01:intron 30.0%
AAATTAAGCATAATTGGAGG+GGG - Chr3:99483674-99483693 None:intergenic 30.0%
AACACCCAAATGATAACATA+AGG - Chr3:99479534-99479553 None:intergenic 30.0%
AACTAATAGATGCGATATAG+AGG - Chr3:99482925-99482944 None:intergenic 30.0%
ACTCTATTGAAACAGAAAAG+AGG - Chr3:99478966-99478985 None:intergenic 30.0%
AGAACAAACCTAAATACATC+TGG - Chr3:99480666-99480685 None:intergenic 30.0%
AGATTTAAACACAACACTAC+TGG - Chr3:99482329-99482348 None:intergenic 30.0%
AGGTCATTGATGTTGAAAAT+TGG - Chr3:99476404-99476423 None:intergenic 30.0%
ATAAAAGTCATAGATGCCTT+TGG - Chr3:99478826-99478845 None:intergenic 30.0%
ATACAACTAAATTGACCACA+TGG - Chr3:99476678-99476697 None:intergenic 30.0%
ATAGAAAGTCTGTGTAGTAT+AGG - Chr3:99476476-99476495 None:intergenic 30.0%
ATAGATTAGATAGGAAGCTT+GGG + Chr3:99478516-99478535 MsG0380017679.01.T01:CDS 30.0%
ATAGGATTGTTGCATGTATT+GGG - Chr3:99482392-99482411 None:intergenic 30.0%
ATGAGAATAGAAAATAGAGG+TGG - Chr3:99477068-99477087 None:intergenic 30.0%
ATGATGACAACCATAAAGAA+AGG - Chr3:99483119-99483138 None:intergenic 30.0%
ATGTCTTATATGGATGAAAC+AGG + Chr3:99484172-99484191 MsG0380017679.01.T01:CDS 30.0%
ATTAGGGCTTAGGTTTAATT+AGG + Chr3:99477444-99477463 MsG0380017679.01.T01:intron 30.0%
ATTCTCATTGCAAACGTAAA+TGG + Chr3:99477080-99477099 MsG0380017679.01.T01:intron 30.0%
ATTTACTAATTGACCATTGC+AGG - Chr3:99480256-99480275 None:intergenic 30.0%
CTAAATATTGTTGTGCTATG+TGG + Chr3:99476633-99476652 MsG0380017679.01.T01:intron 30.0%
CTACAAGAAATTTATCATGG+AGG - Chr3:99483060-99483079 None:intergenic 30.0%
CTCTATTGAAACAGAAAAGA+GGG - Chr3:99478965-99478984 None:intergenic 30.0%
CTTTACTAACAGATTGTCTA+TGG + Chr3:99479485-99479504 MsG0380017679.01.T01:intron 30.0%
GAAAAAAGAATCTGGTAATC+TGG - Chr3:99477231-99477250 None:intergenic 30.0%
GAACAAACCTAAATACATCT+GGG - Chr3:99480665-99480684 None:intergenic 30.0%
GACTCAAAGAAAAACAGAAT+TGG - Chr3:99476205-99476224 None:intergenic 30.0%
GCAATGAGAATAGAAAATAG+AGG - Chr3:99477071-99477090 None:intergenic 30.0%
GGAAAAAATTTGTACACCAA+AGG + Chr3:99478807-99478826 MsG0380017679.01.T01:intron 30.0%
GGTGATTAAAACATTGTTGT+GGG + Chr3:99478786-99478805 MsG0380017679.01.T01:intron 30.0%
GTCCCATATTATAAGCAAAA+AGG - Chr3:99481511-99481530 None:intergenic 30.0%
GTTGATCATAATCAACATGA+AGG - Chr3:99480641-99480660 None:intergenic 30.0%
TAGAAAGTCTGTGTAGTATA+GGG - Chr3:99476475-99476494 None:intergenic 30.0%
TAGATCCGAAAAAAGAACTA+AGG - Chr3:99479340-99479359 None:intergenic 30.0%
TATAGATTAGATAGGAAGCT+TGG + Chr3:99478515-99478534 MsG0380017679.01.T01:CDS 30.0%
TATAGGATTGTTGCATGTAT+TGG - Chr3:99482393-99482412 None:intergenic 30.0%
TCTCAAGACATAAATATGGT+TGG + Chr3:99483608-99483627 MsG0380017679.01.T01:intron 30.0%
TGGTGATTAAAACATTGTTG+TGG + Chr3:99478785-99478804 MsG0380017679.01.T01:intron 30.0%
TGGTTTATTTATTAGCAGTG+TGG + Chr3:99481914-99481933 MsG0380017679.01.T01:CDS 30.0%
TGTAACATAATGTTACACAC+AGG + Chr3:99479181-99479200 MsG0380017679.01.T01:intron 30.0%
TGTATATCATATTCTTGGCA+GGG + Chr3:99480744-99480763 MsG0380017679.01.T01:intron 30.0%
TTAAAGGACCGTATCTAATT+AGG - Chr3:99477563-99477582 None:intergenic 30.0%
TTAATGCTACCTGCAATTAT+TGG - Chr3:99478869-99478888 None:intergenic 30.0%
TTACTAACAGATTGTCTATG+GGG + Chr3:99479487-99479506 MsG0380017679.01.T01:intron 30.0%
TTAGGGCTTAGGTTTAATTA+GGG + Chr3:99477445-99477464 MsG0380017679.01.T01:intron 30.0%
TTCAGAGAGAAAAAAGAATC+TGG - Chr3:99477239-99477258 None:intergenic 30.0%
TTGTAATAGCGTAATCATTG+TGG + Chr3:99483483-99483502 MsG0380017679.01.T01:intron 30.0%
TTGTTACAGGGAGAAAATAA+AGG + Chr3:99480993-99481012 MsG0380017679.01.T01:intron 30.0%
TTTACCTTAACATGAGTACT+AGG - Chr3:99482809-99482828 None:intergenic 30.0%
TTTCTAACATTGGTATTGCA+TGG - Chr3:99480310-99480329 None:intergenic 30.0%
TTTGCTTATAATATGGGACA+AGG + Chr3:99481512-99481531 MsG0380017679.01.T01:intron 30.0%
! ACATAGACATGTTTCTATGA+AGG + Chr3:99476044-99476063 MsG0380017679.01.T01:intron 30.0%
! ACTTTTTATAGCACATTAGG+TGG + Chr3:99479041-99479060 MsG0380017679.01.T01:intron 30.0%
! AGGTTTCTTTTTATCCAGTA+GGG + Chr3:99479805-99479824 MsG0380017679.01.T01:intron 30.0%
! ATACTCTTAAAGCCCTTTTA+TGG + Chr3:99481597-99481616 MsG0380017679.01.T01:intron 30.0%
! ATAGATACATGTTGCCATTT+GGG + Chr3:99478642-99478661 MsG0380017679.01.T01:intron 30.0%
! ATGCAACTAAAATTTTCCAG+CGG + Chr3:99483325-99483344 MsG0380017679.01.T01:intron 30.0%
! CACAATGTTTTCGATTTTCT+CGG - Chr3:99478082-99478101 None:intergenic 30.0%
! CTTAGATCTTTTGTGTCAAT+TGG + Chr3:99483207-99483226 MsG0380017679.01.T01:intron 30.0%
! CTTTAAGAAATCAAGAGGTA+AGG - Chr3:99483397-99483416 None:intergenic 30.0%
! GATTTTATTCATTAGGGCTT+AGG + Chr3:99477434-99477453 MsG0380017679.01.T01:intron 30.0%
! GCAGTAATGTGTTTGTTAAT+GGG + Chr3:99476154-99476173 MsG0380017679.01.T01:intron 30.0%
! GTGTTTGTTAATGGGAATAT+TGG + Chr3:99476162-99476181 MsG0380017679.01.T01:intron 30.0%
! TACTAAATTAAGTGTTGTGG+AGG + Chr3:99479755-99479774 MsG0380017679.01.T01:intron 30.0%
! TACTCTTAAAGCCCTTTTAT+GGG + Chr3:99481598-99481617 MsG0380017679.01.T01:intron 30.0%
! TCAACAAATCATCTTTTCCA+AGG - Chr3:99481459-99481478 None:intergenic 30.0%
! TCATTGGTTGTAATGTCAAA+AGG + Chr3:99482229-99482248 MsG0380017679.01.T01:intron 30.0%
! TCTTTTCTGTTTCAATAGAG+TGG + Chr3:99478965-99478984 MsG0380017679.01.T01:intron 30.0%
! TGATGAGAAAAAGTTGTTTC+TGG + Chr3:99480493-99480512 MsG0380017679.01.T01:CDS 30.0%
! TGCAGTAATGTGTTTGTTAA+TGG + Chr3:99476153-99476172 MsG0380017679.01.T01:intron 30.0%
! TTTTCCTAGTACTCATGTTA+AGG + Chr3:99482802-99482821 MsG0380017679.01.T01:CDS 30.0%
! TTTTGACATTACAACCAATG+AGG - Chr3:99482230-99482249 None:intergenic 30.0%
!! AAACAACTTTTTCTCATCAG+GGG - Chr3:99480492-99480511 None:intergenic 30.0%
!! AGAAACAACTTTTTCTCATC+AGG - Chr3:99480494-99480513 None:intergenic 30.0%
!! AGTAGCTTTAAGAAATCAAG+AGG - Chr3:99483402-99483421 None:intergenic 30.0%
!! ATAAAAGGGCTTTAAGAGTA+TGG - Chr3:99481598-99481617 None:intergenic 30.0%
!! ATTGACAATGAAAGCATCAA+AGG - Chr3:99480556-99480575 None:intergenic 30.0%
!! GAAACAACTTTTTCTCATCA+GGG - Chr3:99480493-99480512 None:intergenic 30.0%
!! GAAGTATCGTATATAAGAGA+GGG - Chr3:99477849-99477868 None:intergenic 30.0%
!! TAATTACAGATTCAAGTTGG+TGG + Chr3:99478482-99478501 MsG0380017679.01.T01:intron 30.0%
!! TGAAGTATCGTATATAAGAG+AGG - Chr3:99477850-99477869 None:intergenic 30.0%
!! TTGACAATGAAAGCATCAAA+GGG - Chr3:99480555-99480574 None:intergenic 30.0%
!!! CTCACTTTTTATAGCACATT+AGG + Chr3:99479038-99479057 MsG0380017679.01.T01:intron 30.0%
!!! CTTTTTTCTCTCTGAAATAG+AGG + Chr3:99477243-99477262 MsG0380017679.01.T01:intron 30.0%
!!! TAGTTTTTTTTTTAACCCCG+AGG + Chr3:99479625-99479644 MsG0380017679.01.T01:intron 30.0%
!!! TTAGTTCTTTTTTCGGATCT+AGG + Chr3:99479339-99479358 MsG0380017679.01.T01:intron 30.0%
!!! TTTTTGTTATTCGTGGAAGT+TGG + Chr3:99484007-99484026 MsG0380017679.01.T01:intron 30.0%
AAGTCCCAAATCAAGTAGTA+TGG + Chr3:99480095-99480114 MsG0380017679.01.T01:intron 35.0%
AAGTGGATCAACAAAAATGG+AGG + Chr3:99482436-99482455 MsG0380017679.01.T01:intron 35.0%
AAGTGTTTAGAGATCTGTGA+TGG - Chr3:99477774-99477793 None:intergenic 35.0%
AATAAATGTTGCTCAACCTC+GGG - Chr3:99479644-99479663 None:intergenic 35.0%
AATTAAGCATAATTGGAGGG+GGG - Chr3:99483673-99483692 None:intergenic 35.0%
ACAAAAGCAACACAAAGCTT+CGG - Chr3:99481054-99481073 None:intergenic 35.0%
ACCCACAATTCCATCAAAAA+GGG - Chr3:99481155-99481174 None:intergenic 35.0%
ACTTCACTCATCAATGACTT+TGG + Chr3:99477864-99477883 MsG0380017679.01.T01:intron 35.0%
AGAAAGTCTGTGTAGTATAG+GGG - Chr3:99476474-99476493 None:intergenic 35.0%
AGAAGTTCCTTAACTTCACT+TGG - Chr3:99475853-99475872 None:intergenic 35.0%
AGATCTCTATGAATGATGCA+AGG - Chr3:99476129-99476148 None:intergenic 35.0%
AGCACATACCATAATGTAGT+AGG - Chr3:99479111-99479130 None:intergenic 35.0%
AGCACCACATACTAATAGTT+CGG - Chr3:99475774-99475793 None:intergenic 35.0%
AGCTTGGTCAGAAAAATAAG+AGG - Chr3:99483885-99483904 None:intergenic 35.0%
AGTAGAGAGATTGAAAGAAG+AGG + Chr3:99478122-99478141 MsG0380017679.01.T01:CDS 35.0%
AGTGGATCAACAAAAATGGA+GGG + Chr3:99482437-99482456 MsG0380017679.01.T01:intron 35.0%
AGTGTTTAGAGATCTGTGAT+GGG - Chr3:99477773-99477792 None:intergenic 35.0%
ATAATGTTACACACAGGTCA+TGG + Chr3:99479187-99479206 MsG0380017679.01.T01:intron 35.0%
ATATTAGGGTTTGTGATGAG+AGG - Chr3:99477804-99477823 None:intergenic 35.0%
ATCCTAAAAGCTAGCTATCA+AGG - Chr3:99480158-99480177 None:intergenic 35.0%
ATGAAACAGGTGTGCTTATA+TGG + Chr3:99484185-99484204 MsG0380017679.01.T01:CDS 35.0%
ATGAATCTGTTTCACAGGAA+TGG + Chr3:99482143-99482162 MsG0380017679.01.T01:intron 35.0%
ATGAATTGTTCGATTCTAGG+AGG + Chr3:99477165-99477184 MsG0380017679.01.T01:intron 35.0%
ATGGCAACATGTATCTATCA+CGG - Chr3:99478640-99478659 None:intergenic 35.0%
CAAAAACAAATTTGAGGGCA+TGG - Chr3:99480222-99480241 None:intergenic 35.0%
CACAACACAAACCCATAAAA+GGG - Chr3:99481612-99481631 None:intergenic 35.0%
CTACATATTCTACAAACTGC+CGG - Chr3:99481087-99481106 None:intergenic 35.0%
CTATTTGATGCCAACACTTT+AGG + Chr3:99476422-99476441 MsG0380017679.01.T01:intron 35.0%
CTCGCCTTATGTTATCATTT+GGG + Chr3:99479527-99479546 MsG0380017679.01.T01:intron 35.0%
CTGTATATCATATTCTTGGC+AGG + Chr3:99480743-99480762 MsG0380017679.01.T01:intron 35.0%
CTTCACTATGAACATTTCTG+AGG - Chr3:99478297-99478316 None:intergenic 35.0%
GAACTAATGAGAAAACTGCA+GGG - Chr3:99479886-99479905 None:intergenic 35.0%
GAATTTCTTTGTGTGTGTGA+TGG - Chr3:99476816-99476835 None:intergenic 35.0%
GACCGTATCTAATTAGGATT+AGG - Chr3:99477557-99477576 None:intergenic 35.0%
GATAGATACATGTTGCCATT+TGG + Chr3:99478641-99478660 MsG0380017679.01.T01:intron 35.0%
GATATTGCTCCAATAATTGC+AGG + Chr3:99478857-99478876 MsG0380017679.01.T01:intron 35.0%
GTATATCATATTCTTGGCAG+GGG + Chr3:99480745-99480764 MsG0380017679.01.T01:intron 35.0%
GTATGCTACACCTTTCTTTA+TGG + Chr3:99483106-99483125 MsG0380017679.01.T01:intron 35.0%
TAAGTCACACCAATTGATGA+TGG + Chr3:99476939-99476958 MsG0380017679.01.T01:intron 35.0%
TAGAGAAGATGCATTGTAGA+GGG + Chr3:99479411-99479430 MsG0380017679.01.T01:CDS 35.0%
TAGGTCAAAATCATATCAGC+TGG - Chr3:99482990-99483009 None:intergenic 35.0%
TATCCCGAACTATTAGTATG+TGG + Chr3:99475767-99475786 MsG0380017679.01.T01:CDS 35.0%
TATCTACCATAACTACCAGT+TGG - Chr3:99475749-99475768 None:intergenic 35.0%
TATTAGGGTTTGTGATGAGA+GGG - Chr3:99477803-99477822 None:intergenic 35.0%
TCACAACACAAACCCATAAA+AGG - Chr3:99481613-99481632 None:intergenic 35.0%
TCTAGTTAGGGCTAAAATGT+TGG + Chr3:99477389-99477408 MsG0380017679.01.T01:intron 35.0%
TCTCGCCTTATGTTATCATT+TGG + Chr3:99479526-99479545 MsG0380017679.01.T01:intron 35.0%
TCTTGTCTGCAAGAAAAAGA+TGG + Chr3:99481019-99481038 MsG0380017679.01.T01:CDS 35.0%
TGAACTAATGAGAAAACTGC+AGG - Chr3:99479887-99479906 None:intergenic 35.0%
TGATGAACAACCAAAGAAGA+AGG + Chr3:99481688-99481707 MsG0380017679.01.T01:CDS 35.0%
TGGGAGAACAGTTTCATAAA+TGG + Chr3:99482946-99482965 MsG0380017679.01.T01:intron 35.0%
TGTGATTATGATAGGGACTT+GGG + Chr3:99480057-99480076 MsG0380017679.01.T01:intron 35.0%
TGTGCTATAAAAAGTGAGCA+TGG - Chr3:99479036-99479055 None:intergenic 35.0%
TGTTGTGAAGCTTATATGTC+AGG + Chr3:99481625-99481644 MsG0380017679.01.T01:intron 35.0%
TTAGAGAAGATGCATTGTAG+AGG + Chr3:99479410-99479429 MsG0380017679.01.T01:CDS 35.0%
TTCCCCATGAGGTAAAAAAA+CGG - Chr3:99479557-99479576 None:intergenic 35.0%
TTCGATGAATACCTTCACTA+GGG - Chr3:99482661-99482680 None:intergenic 35.0%
TTGAGCATAGAAACAGCAAA+GGG + Chr3:99478892-99478911 MsG0380017679.01.T01:intron 35.0%
TTTGAGCATAGAAACAGCAA+AGG + Chr3:99478891-99478910 MsG0380017679.01.T01:intron 35.0%
! ATCCCTTTTTGATGGAATTG+TGG + Chr3:99481150-99481169 MsG0380017679.01.T01:intron 35.0%
! ATCTAGGATGTCTACTGAAA+TGG + Chr3:99479355-99479374 MsG0380017679.01.T01:intron 35.0%
! GAGGTTTCTTTTTATCCAGT+AGG + Chr3:99479804-99479823 MsG0380017679.01.T01:intron 35.0%
! GCTCAAAACCTTTGTTTCAT+TGG - Chr3:99481767-99481786 None:intergenic 35.0%
! GTAAACAACTTTTGTCACCA+AGG - Chr3:99483452-99483471 None:intergenic 35.0%
! GTTTTTGTGAGATCTAAGCT+AGG + Chr3:99476286-99476305 MsG0380017679.01.T01:intron 35.0%
! TCCCTTTTTGATGGAATTGT+GGG + Chr3:99481151-99481170 MsG0380017679.01.T01:intron 35.0%
! TGAGCTTCGTTCAAATGTTT+TGG + Chr3:99484220-99484239 MsG0380017679.01.T01:CDS 35.0%
! TGCAACTAAAATTTTCCAGC+GGG + Chr3:99483326-99483345 MsG0380017679.01.T01:intron 35.0%
! TGCTTATAATTTGGGACGAA+GGG - Chr3:99481259-99481278 None:intergenic 35.0%
! TTGCTTATAATTTGGGACGA+AGG - Chr3:99481260-99481279 None:intergenic 35.0%
!! AAACGAGTCACTGACTTTAT+AGG - Chr3:99482410-99482429 None:intergenic 35.0%
!! AAGTTGTTTCTGGTTGATCT+TGG + Chr3:99480503-99480522 MsG0380017679.01.T01:CDS 35.0%
!! AGAGGCTTTATTCTGAAGTT+AGG + Chr3:99475893-99475912 MsG0380017679.01.T01:CDS 35.0%
!! ATACCTGTTTCTAAGTGTCA+CGG - Chr3:99484096-99484115 None:intergenic 35.0%
!! CTAAAGTGTTGGCATCAAAT+AGG - Chr3:99476424-99476443 None:intergenic 35.0%
!! CTATGAAGGCATTGAAGAAA+TGG + Chr3:99476058-99476077 MsG0380017679.01.T01:intron 35.0%
!! GGTTGGTTTGATTGATATGA+AGG + Chr3:99483625-99483644 MsG0380017679.01.T01:intron 35.0%
!! TGTTTCACAGGAATGGATTA+TGG + Chr3:99482150-99482169 MsG0380017679.01.T01:intron 35.0%
!! TTTCTGGTTGATCTTGGATT+AGG + Chr3:99480509-99480528 MsG0380017679.01.T01:CDS 35.0%
!!! AGGATTTTTTGTCACTGCTA+TGG + Chr3:99482461-99482480 MsG0380017679.01.T01:CDS 35.0%
!!! GACTTTCTATATTTTGGCGT+AGG + Chr3:99481834-99481853 MsG0380017679.01.T01:intron 35.0%
!!! GATGCTGTTTTTGTTATTCG+TGG + Chr3:99484000-99484019 MsG0380017679.01.T01:intron 35.0%
!!! GGGTGAGTATTTTAGTAGAT+TGG + Chr3:99480124-99480143 MsG0380017679.01.T01:intron 35.0%
!!! GTTCCGTTTTTTTACCTCAT+GGG + Chr3:99479551-99479570 MsG0380017679.01.T01:intron 35.0%
!!! TCTTTTTCAACAGTACCATG+TGG + Chr3:99476660-99476679 MsG0380017679.01.T01:intron 35.0%
!!! TGTTCCGTTTTTTTACCTCA+TGG + Chr3:99479550-99479569 MsG0380017679.01.T01:intron 35.0%
!!! TTCCGTTTTTTTACCTCATG+GGG + Chr3:99479552-99479571 MsG0380017679.01.T01:intron 35.0%
AAAAGAGCCAAGTACAAGGT+AGG - Chr3:99483372-99483391 None:intergenic 40.0%
AAAATCACCTTCTCAGGAAG+TGG - Chr3:99478270-99478289 None:intergenic 40.0%
AAACACCGTACATACCTCAA+CGG - Chr3:99478597-99478616 None:intergenic 40.0%
AAGAAGGAATTGAGGTAGCA+TGG + Chr3:99475825-99475844 MsG0380017679.01.T01:CDS 40.0%
AAGCCTGAAAACTTCTTGCT+TGG + Chr3:99480455-99480474 MsG0380017679.01.T01:CDS 40.0%
AAGGCCAAATTCAGACATTG+AGG - Chr3:99483433-99483452 None:intergenic 40.0%
AATCAAGTAGTATGGCGTGT+TGG + Chr3:99480103-99480122 MsG0380017679.01.T01:intron 40.0%
ACACGCCATACTACTTGATT+TGG - Chr3:99480103-99480122 None:intergenic 40.0%
ACCAACCTTGTGAAGAAAAC+TGG - Chr3:99482015-99482034 None:intergenic 40.0%
ACGCATTCAACCTAAAGTGT+TGG - Chr3:99476435-99476454 None:intergenic 40.0%
ACTGATCCAACTGGTAGTTA+TGG + Chr3:99475740-99475759 MsG0380017679.01.T01:CDS 40.0%
AGAGAATAAGAAGAAGGCAG+TGG + Chr3:99478149-99478168 MsG0380017679.01.T01:CDS 40.0%
AGCGTTTCTTGAGTTTCATC+AGG - Chr3:99482770-99482789 None:intergenic 40.0%
AGTTGTACTCCCTTCTTCTT+CGG - Chr3:99478247-99478266 None:intergenic 40.0%
ATAAAGCCTCTCATCATAGC+AGG - Chr3:99475884-99475903 None:intergenic 40.0%
ATAAATGTTGCTCAACCTCG+GGG - Chr3:99479643-99479662 None:intergenic 40.0%
ATAAGAAGAAGGCAGTGGTT+AGG + Chr3:99478154-99478173 MsG0380017679.01.T01:CDS 40.0%
ATATCTGCAACAACAACAGC+AGG - Chr3:99480420-99480439 None:intergenic 40.0%
ATATTCTACAAACTGCCGGA+AGG - Chr3:99481083-99481102 None:intergenic 40.0%
ATCAACGCCCAGATGTATTT+AGG + Chr3:99480655-99480674 MsG0380017679.01.T01:CDS 40.0%
ATCAAGTAGTATGGCGTGTT+GGG + Chr3:99480104-99480123 MsG0380017679.01.T01:intron 40.0%
ATCAGTTTCCACAAATGCCT+CGG - Chr3:99475726-99475745 None:intergenic 40.0%
ATCGCTGAGGTTTATACAAG+TGG + Chr3:99475997-99476016 MsG0380017679.01.T01:intron 40.0%
ATCTTGGTAGAACAAGTAGC+AGG + Chr3:99480797-99480816 MsG0380017679.01.T01:CDS 40.0%
ATTAAGCATAATTGGAGGGG+GGG - Chr3:99483672-99483691 None:intergenic 40.0%
ATTAGATAGGAAGCTTGGGA+AGG + Chr3:99478520-99478539 MsG0380017679.01.T01:CDS 40.0%
CAAAAGCAACACAAAGCTTC+GGG - Chr3:99481053-99481072 None:intergenic 40.0%
CACGCCATACTACTTGATTT+GGG - Chr3:99480102-99480121 None:intergenic 40.0%
CATATCTATTCCCGTTGCTT+CGG - Chr3:99478767-99478786 None:intergenic 40.0%
CATGGAACCAAGTGAAGTTA+AGG + Chr3:99475843-99475862 MsG0380017679.01.T01:CDS 40.0%
CTAAAAGCTAGCTATCAAGG+AGG - Chr3:99480155-99480174 None:intergenic 40.0%
CTACCTCAATTCCTTCTTCT+TGG - Chr3:99475823-99475842 None:intergenic 40.0%
CTCGTAGACCAATGAAACAA+AGG + Chr3:99481756-99481775 MsG0380017679.01.T01:intron 40.0%
CTGATACTGGAATTACAGCT+TGG - Chr3:99483901-99483920 None:intergenic 40.0%
CTGTGATTATGATAGGGACT+TGG + Chr3:99480056-99480075 MsG0380017679.01.T01:intron 40.0%
CTTCGATGAATACCTTCACT+AGG - Chr3:99482662-99482681 None:intergenic 40.0%
GACCCACAATTCCATCAAAA+AGG - Chr3:99481156-99481175 None:intergenic 40.0%
GAGAGATTGAAAGAAGAGGA+AGG + Chr3:99478126-99478145 MsG0380017679.01.T01:CDS 40.0%
GATAACCTGATATCTTGCCA+AGG - Chr3:99480880-99480899 None:intergenic 40.0%
GATCAACAAAAATGGAGGGA+AGG + Chr3:99482441-99482460 MsG0380017679.01.T01:CDS 40.0%
GATTACGCTATTACAAACGC+TGG - Chr3:99483479-99483498 None:intergenic 40.0%
GATTTCTTAAAGCTACTCCG+AGG + Chr3:99483405-99483424 MsG0380017679.01.T01:intron 40.0%
GCACCACATACTAATAGTTC+GGG - Chr3:99475773-99475792 None:intergenic 40.0%
GCGTAGGTATCATTACAATG+TGG + Chr3:99481850-99481869 MsG0380017679.01.T01:intron 40.0%
GGAAGGAGAGAATAAGAAGA+AGG + Chr3:99478143-99478162 MsG0380017679.01.T01:CDS 40.0%
GGAATCAAAATCACCTTCTC+AGG - Chr3:99478276-99478295 None:intergenic 40.0%
GGATAAAAGAGCCAAGTACA+AGG - Chr3:99483376-99483395 None:intergenic 40.0%
GGTAATACTCAACAGAGAAG+AGG - Chr3:99484068-99484087 None:intergenic 40.0%
GTGAAGCTTATATGTCAGGT+TGG + Chr3:99481629-99481648 MsG0380017679.01.T01:intron 40.0%
GTGACTCGTTTCCATTTAAG+TGG + Chr3:99482419-99482438 MsG0380017679.01.T01:intron 40.0%
GTTCCACGAGTACATTACAA+GGG + Chr3:99479074-99479093 MsG0380017679.01.T01:intron 40.0%
GTTGCTTCGGCACAAAATAA+CGG - Chr3:99478754-99478773 None:intergenic 40.0%
GTTTCTTGAGTTTCATCAGG+TGG - Chr3:99482767-99482786 None:intergenic 40.0%
TAAGAAGAAGGCAGTGGTTA+GGG + Chr3:99478155-99478174 MsG0380017679.01.T01:CDS 40.0%
TACTAGGAAAATCAGACGTG+CGG - Chr3:99482793-99482812 None:intergenic 40.0%
TAGGATGTCTACTGAAATGG+TGG + Chr3:99479358-99479377 MsG0380017679.01.T01:intron 40.0%
TAGGGCTAAAATGTTGGCAT+GGG + Chr3:99477395-99477414 MsG0380017679.01.T01:intron 40.0%
TAGTCTTTGGGCACTCATTA+TGG + Chr3:99481947-99481966 MsG0380017679.01.T01:CDS 40.0%
TATTACATCAGTGCCATAGC+TGG + Chr3:99482190-99482209 MsG0380017679.01.T01:CDS 40.0%
TCAATGTCTGAATTTGGCCT+TGG + Chr3:99483432-99483451 MsG0380017679.01.T01:intron 40.0%
TCGCTGAGGTTTATACAAGT+GGG + Chr3:99475998-99476017 MsG0380017679.01.T01:intron 40.0%
TCTAGTTGAGTCAGACGTTA+TGG + Chr3:99478387-99478406 MsG0380017679.01.T01:intron 40.0%
TCTTCTCTTTCCACTTGACT+TGG - Chr3:99476907-99476926 None:intergenic 40.0%
TGTAGAATGCAGTTCAGCAT+TGG + Chr3:99483075-99483094 MsG0380017679.01.T01:intron 40.0%
TGTGTTCCACCATCATCAAT+TGG - Chr3:99476951-99476970 None:intergenic 40.0%
TGTTAATGGGAATATTGGCC+AGG + Chr3:99476167-99476186 MsG0380017679.01.T01:intron 40.0%
TGTTCCACGAGTACATTACA+AGG + Chr3:99479073-99479092 MsG0380017679.01.T01:intron 40.0%
TGTTGTTGCAGATATGTGCA+TGG + Chr3:99480425-99480444 MsG0380017679.01.T01:intron 40.0%
TTAGATAGGAAGCTTGGGAA+GGG + Chr3:99478521-99478540 MsG0380017679.01.T01:CDS 40.0%
TTAGGGCTAAAATGTTGGCA+TGG + Chr3:99477394-99477413 MsG0380017679.01.T01:intron 40.0%
TTCATCATCATCCTCTTCCA+TGG - Chr3:99481675-99481694 None:intergenic 40.0%
TTCTCTCTAAACTCGATGCT+AGG + Chr3:99482613-99482632 MsG0380017679.01.T01:intron 40.0%
TTGTAAACCTGCCATTCATG+TGG - Chr3:99478933-99478952 None:intergenic 40.0%
TTTGTCTGGTGTGTACAATG+TGG + Chr3:99476532-99476551 MsG0380017679.01.T01:intron 40.0%
TTTGTGGAAACTGATCCAAC+TGG + Chr3:99475731-99475750 MsG0380017679.01.T01:CDS 40.0%
! AAAATTTTCCAGCGGGAACT+GGG + Chr3:99483333-99483352 MsG0380017679.01.T01:intron 40.0%
! AACAGCAAAGGGTGCAATTA+CGG + Chr3:99478903-99478922 MsG0380017679.01.T01:intron 40.0%
! AATTAAGTGTTGTGGAGGAG+AGG + Chr3:99479760-99479779 MsG0380017679.01.T01:intron 40.0%
! ACTTTTCATGAGCACATCTC+AGG - Chr3:99479974-99479993 None:intergenic 40.0%
! AGAGGTTTCTTGTTATCCAG+AGG + Chr3:99479778-99479797 MsG0380017679.01.T01:intron 40.0%
! AGGTTTCTTGTTATCCAGAG+GGG + Chr3:99479780-99479799 MsG0380017679.01.T01:intron 40.0%
! ATGGTCAAGGCAGATTTTGA+AGG + Chr3:99476077-99476096 MsG0380017679.01.T01:intron 40.0%
! CAACCTGAACATCTGATTTG+AGG - Chr3:99484268-99484287 None:intergenic 40.0%
! CATCAGGTGGTTTTCTTCTT+GGG - Chr3:99482754-99482773 None:intergenic 40.0%
! CTCTTCCAGTTTTCTTCACA+AGG + Chr3:99482007-99482026 MsG0380017679.01.T01:CDS 40.0%
! GAGGTTTCTTGTTATCCAGA+GGG + Chr3:99479779-99479798 MsG0380017679.01.T01:intron 40.0%
! GATTCTAGGAGGACAATTCT+TGG + Chr3:99477176-99477195 MsG0380017679.01.T01:intron 40.0%
! GTCTTTTGTGAGCCAAACTT+CGG + Chr3:99476561-99476580 MsG0380017679.01.T01:intron 40.0%
! GTGGGAATTTGAGAGAGTAT+AGG + Chr3:99476016-99476035 MsG0380017679.01.T01:intron 40.0%
! TAAAATTTTCCAGCGGGAAC+TGG + Chr3:99483332-99483351 MsG0380017679.01.T01:intron 40.0%
! TCATCAGGTGGTTTTCTTCT+TGG - Chr3:99482755-99482774 None:intergenic 40.0%
! TCCAGTTTTCTTCACAAGGT+TGG + Chr3:99482011-99482030 MsG0380017679.01.T01:intron 40.0%
! TCTTTTTATCCAGTAGGGTG+AGG + Chr3:99479810-99479829 MsG0380017679.01.T01:intron 40.0%
! TGCTTATAATTTGGGACGGA+GGG + Chr3:99481550-99481569 MsG0380017679.01.T01:intron 40.0%
! TGGTCAAGGCAGATTTTGAA+GGG + Chr3:99476078-99476097 MsG0380017679.01.T01:intron 40.0%
! TTGCTTATAATTTGGGACGG+AGG + Chr3:99481549-99481568 MsG0380017679.01.T01:intron 40.0%
! TTTAGAGATCTGTGATGGGA+GGG - Chr3:99477769-99477788 None:intergenic 40.0%
! TTTCTGGTGATTCATCTGAG+TGG + Chr3:99483934-99483953 MsG0380017679.01.T01:intron 40.0%
! TTTTCTACACAGCAACTCGT+TGG + Chr3:99480598-99480617 MsG0380017679.01.T01:intron 40.0%
!! AGGAATGGATTATGGAACAG+TGG + Chr3:99482158-99482177 MsG0380017679.01.T01:intron 40.0%
!! AGGCATTGAAGAAATGGTCA+AGG + Chr3:99476064-99476083 MsG0380017679.01.T01:intron 40.0%
!! ATATGCTTGGCTCTAGTCTA+TGG + Chr3:99479210-99479229 MsG0380017679.01.T01:CDS 40.0%
!! CTAGTGAAGGTATTCATCGA+AGG + Chr3:99482660-99482679 MsG0380017679.01.T01:CDS 40.0%
!! GAAAGCATCAAAGGGTAACA+TGG - Chr3:99480547-99480566 None:intergenic 40.0%
!! GGAATGGATTATGGAACAGT+GGG + Chr3:99482159-99482178 MsG0380017679.01.T01:intron 40.0%
!! GTTATTTTGTGCCGAAGCAA+CGG + Chr3:99478753-99478772 MsG0380017679.01.T01:intron 40.0%
!! TATGCTTGGCTCTAGTCTAT+GGG + Chr3:99479211-99479230 MsG0380017679.01.T01:CDS 40.0%
!! TGAAGGTATTCATCGAAGGT+GGG + Chr3:99482664-99482683 MsG0380017679.01.T01:CDS 40.0%
!! TTATTTTGTGCCGAAGCAAC+GGG + Chr3:99478754-99478773 MsG0380017679.01.T01:intron 40.0%
!!! CTCCTTGATAGCTAGCTTTT+AGG + Chr3:99480153-99480172 MsG0380017679.01.T01:intron 40.0%
AAAAAGAAACCTCACCCCTC+TGG - Chr3:99479797-99479816 None:intergenic 45.0%
AAACTTCTTGCTTGGACCCT+CGG + Chr3:99480463-99480482 MsG0380017679.01.T01:CDS 45.0%
AAAGAGAGGACGATTGACCA+TGG + Chr3:99481655-99481674 MsG0380017679.01.T01:CDS 45.0%
AAATGCCTCGGAGTCTTTGT+CGG - Chr3:99475714-99475733 None:intergenic 45.0%
AACTCAGATGTGTAGGCAAG+CGG - Chr3:99483024-99483043 None:intergenic 45.0%
AAGTAGCAGGAGAGATGACT+TGG + Chr3:99480810-99480829 MsG0380017679.01.T01:CDS 45.0%
AAGTAGGCCTACCTTGTACT+TGG + Chr3:99483362-99483381 MsG0380017679.01.T01:intron 45.0%
ACACAGGTCATGGATATGCT+TGG + Chr3:99479197-99479216 MsG0380017679.01.T01:intron 45.0%
ACACTAATCCACTGTGTTGC+TGG - Chr3:99481728-99481747 None:intergenic 45.0%
ACCAAAGAAGAAGGTCCGAA+TGG + Chr3:99481697-99481716 MsG0380017679.01.T01:CDS 45.0%
ACTAATTGACCATTGCAGGC+AGG - Chr3:99480252-99480271 None:intergenic 45.0%
AGCACATTAGGTGGTAGTCA+TGG + Chr3:99479050-99479069 MsG0380017679.01.T01:intron 45.0%
AGTCCGTGACACTTAGAAAC+AGG + Chr3:99484090-99484109 MsG0380017679.01.T01:intron 45.0%
AGTTCCCAACTCAGATGTGT+AGG - Chr3:99483031-99483050 None:intergenic 45.0%
ATTACAATGTGGCCGATGAG+CGG + Chr3:99481861-99481880 MsG0380017679.01.T01:CDS 45.0%
ATTACGGACCTCCACATGAA+TGG + Chr3:99478919-99478938 MsG0380017679.01.T01:intron 45.0%
ATTAGGCCCCTAAATACCGA+GGG + Chr3:99481187-99481206 MsG0380017679.01.T01:intron 45.0%
ATTCAGACATTGAGGAGCCT+CGG - Chr3:99483425-99483444 None:intergenic 45.0%
ATTGAACGTGTTTCCCCATG+AGG - Chr3:99479568-99479587 None:intergenic 45.0%
CACGAGTACATTACAAGGGA+CGG + Chr3:99479078-99479097 MsG0380017679.01.T01:intron 45.0%
CATTAGTTCAGACTGAGAGC+AGG + Chr3:99479897-99479916 MsG0380017679.01.T01:intron 45.0%
CCAAAGAAGAAGGTCCGAAT+GGG + Chr3:99481698-99481717 MsG0380017679.01.T01:CDS 45.0%
CCTCCTCAAATCAGATGTTC+AGG + Chr3:99484262-99484281 MsG0380017679.01.T01:CDS 45.0%
CGAAGCAACGGGAATAGATA+TGG + Chr3:99478765-99478784 MsG0380017679.01.T01:intron 45.0%
CGACCAAGAAGAAGGAATTG+AGG + Chr3:99475817-99475836 MsG0380017679.01.T01:CDS 45.0%
CTAAACTCGATGCTAGGTTG+TGG + Chr3:99482619-99482638 MsG0380017679.01.T01:intron 45.0%
CTAATTGACCATTGCAGGCA+GGG - Chr3:99480251-99480270 None:intergenic 45.0%
CTTCTTCTTGGTCGAATGCA+CGG - Chr3:99475811-99475830 None:intergenic 45.0%
CTTGCCTACACATCTGAGTT+GGG + Chr3:99483024-99483043 MsG0380017679.01.T01:intron 45.0%
GAAGACAAGCGTGTAAGCAA+GGG - Chr3:99480839-99480858 None:intergenic 45.0%
GAATACCTTCACTAGGGTAC+AGG - Chr3:99482655-99482674 None:intergenic 45.0%
GACAAGTATCTGAGCACTTG+AGG - Chr3:99480182-99480201 None:intergenic 45.0%
GATAACATAAGGCGAGACTC+AGG - Chr3:99479523-99479542 None:intergenic 45.0%
GATAGGGACTTGGGCATTAT+GGG + Chr3:99480066-99480085 MsG0380017679.01.T01:intron 45.0%
GATGAACCGGAGTTAACACT+CGG - Chr3:99475692-99475711 None:intergenic 45.0%
GATGAACCTGCTATGATGAG+AGG + Chr3:99475875-99475894 MsG0380017679.01.T01:CDS 45.0%
GATTTCCTGTACCCTAGTGA+AGG + Chr3:99482647-99482666 MsG0380017679.01.T01:CDS 45.0%
GCGAATCTCTCTCATCTTCA+TGG + Chr3:99477894-99477913 MsG0380017679.01.T01:intron 45.0%
GCTATGGATGAGTACGATAG+TGG + Chr3:99478192-99478211 MsG0380017679.01.T01:CDS 45.0%
GCTCTAGTCTATGGGATGTT+TGG + Chr3:99479219-99479238 MsG0380017679.01.T01:CDS 45.0%
GGATTTGGGCAAGTCTATGT+TGG + Chr3:99478545-99478564 MsG0380017679.01.T01:CDS 45.0%
GGCTCCTCAATGTCTGAATT+TGG + Chr3:99483426-99483445 MsG0380017679.01.T01:intron 45.0%
GGGGTTTCTATTGTCTCTGA+AGG + Chr3:99479155-99479174 MsG0380017679.01.T01:intron 45.0%
GGTGTTTATGTCTGCCATTG+TGG + Chr3:99478610-99478629 MsG0380017679.01.T01:intron 45.0%
GGTTACCTTGGCAAGATATC+AGG + Chr3:99480872-99480891 MsG0380017679.01.T01:CDS 45.0%
GGTTTGTGATGAGAGGGAAA+TGG - Chr3:99477797-99477816 None:intergenic 45.0%
GTATTTAGGGGCCTAATGTC+AGG - Chr3:99481184-99481203 None:intergenic 45.0%
GTGAATAACGACGACGAAAC+AGG + Chr3:99478099-99478118 MsG0380017679.01.T01:intron 45.0%
GTGATCTGCTGTTCCTTACA+GGG + Chr3:99482365-99482384 MsG0380017679.01.T01:intron 45.0%
GTTTCTAAGTGTCACGGACT+CGG - Chr3:99484090-99484109 None:intergenic 45.0%
TAAACCTGCCATTCATGTGG+AGG - Chr3:99478930-99478949 None:intergenic 45.0%
TAAGCTTGACACACTGATCC+TGG - Chr3:99479851-99479870 None:intergenic 45.0%
TAATTGACCATTGCAGGCAG+GGG - Chr3:99480250-99480269 None:intergenic 45.0%
TACAACTCCACTTCCTGAGA+AGG + Chr3:99478260-99478279 MsG0380017679.01.T01:CDS 45.0%
TACTCCATCACCAAGTCAAG+TGG + Chr3:99476894-99476913 MsG0380017679.01.T01:intron 45.0%
TCCAGTATCAGTCTGCATGA+TGG + Chr3:99483910-99483929 MsG0380017679.01.T01:intron 45.0%
TCCATCATGCAGACTGATAC+TGG - Chr3:99483914-99483933 None:intergenic 45.0%
TGAGGAGAGGATGAGGTTAT+AGG - Chr3:99476590-99476609 None:intergenic 45.0%
TGATAGGGACTTGGGCATTA+TGG + Chr3:99480065-99480084 MsG0380017679.01.T01:intron 45.0%
TGGGTCCAAATCCTGACATT+AGG + Chr3:99481170-99481189 MsG0380017679.01.T01:intron 45.0%
TGTGATCTGCTGTTCCTTAC+AGG + Chr3:99482364-99482383 MsG0380017679.01.T01:intron 45.0%
TTAAGCATAATTGGAGGGGG+GGG - Chr3:99483671-99483690 None:intergenic 45.0%
TTGCAGCAGTTGCAGTAATG+CGG - Chr3:99482700-99482719 None:intergenic 45.0%
TTGTCTTCCTTCTTCGTGGT+CGG + Chr3:99480851-99480870 MsG0380017679.01.T01:CDS 45.0%
TTTCTAAGTGTCACGGACTC+GGG - Chr3:99484089-99484108 None:intergenic 45.0%
! AGGCATCGTAAAGATAGCGT+TGG - Chr3:99477921-99477940 None:intergenic 45.0%
! AGTGGTTAGGGTTTCTAGAG+AGG + Chr3:99478167-99478186 MsG0380017679.01.T01:CDS 45.0%
! ATGGATGAGTACGATAGTGG+TGG + Chr3:99478195-99478214 MsG0380017679.01.T01:CDS 45.0%
! CCTGAACATCTGATTTGAGG+AGG - Chr3:99484265-99484284 None:intergenic 45.0%
! CTGGTAATCTGGAGTTCGAA+CGG - Chr3:99477220-99477239 None:intergenic 45.0%
! GCAAGCGGGAATTTTGCAAT+AGG - Chr3:99483009-99483028 None:intergenic 45.0%
! GCAAGGTGCCTACTACATTA+TGG + Chr3:99479100-99479119 MsG0380017679.01.T01:intron 45.0%
! GGTCCAAGCAAGAAGTTTTC+AGG - Chr3:99480461-99480480 None:intergenic 45.0%
! GGTTTCTAGAGAGGAAGCTA+TGG + Chr3:99478176-99478195 MsG0380017679.01.T01:CDS 45.0%
! GTTTAGAGATCTGTGATGGG+AGG - Chr3:99477770-99477789 None:intergenic 45.0%
! TAGAAAGCACAACTTACGCC+AGG - Chr3:99476616-99476635 None:intergenic 45.0%
!! CAGTCTGCATGATGGATTTC+TGG + Chr3:99483918-99483937 MsG0380017679.01.T01:intron 45.0%
!! CTTTCCACTTGACTTGGTGA+TGG - Chr3:99476901-99476920 None:intergenic 45.0%
!! GACGGAGGGAGTATCATTTA+AGG + Chr3:99481564-99481583 MsG0380017679.01.T01:intron 45.0%
!! GGCTTCTTGTGCTAGTCTTT+GGG + Chr3:99481935-99481954 MsG0380017679.01.T01:CDS 45.0%
!! GGTCAAGGCAGATTTTGAAG+GGG + Chr3:99476079-99476098 MsG0380017679.01.T01:intron 45.0%
!! GTCACACCAATTGATGATGG+TGG + Chr3:99476942-99476961 MsG0380017679.01.T01:intron 45.0%
!! GTGAAGGTATTCATCGAAGG+TGG + Chr3:99482663-99482682 MsG0380017679.01.T01:CDS 45.0%
!! TGGCTTCTTGTGCTAGTCTT+TGG + Chr3:99481934-99481953 MsG0380017679.01.T01:CDS 45.0%
!! TGTCAGGTTGGACAAAAGAG+AGG + Chr3:99481641-99481660 MsG0380017679.01.T01:intron 45.0%
!! TATATTTATTATTTATACAT+GGG + Chr3:99479458-99479477 MsG0380017679.01.T01:intron 5.0%
!! TTATATTTATTATTTATACA+TGG + Chr3:99479457-99479476 MsG0380017679.01.T01:intron 5.0%
AACGAAGCTCAGATGCCATC+AGG - Chr3:99484211-99484230 None:intergenic 50.0%
AACTTCTTGCTTGGACCCTC+GGG + Chr3:99480464-99480483 MsG0380017679.01.T01:CDS 50.0%
AAGCTTGGGAAGGGAGGATT+TGG + Chr3:99478530-99478549 MsG0380017679.01.T01:CDS 50.0%
AAGGTAACCGACCACGAAGA+AGG - Chr3:99480861-99480880 None:intergenic 50.0%
AAGTACCTTCTGAGCACCCT+CGG - Chr3:99481206-99481225 None:intergenic 50.0%
ACACAAAGCTTCGGGTGAAG+TGG - Chr3:99481045-99481064 None:intergenic 50.0%
ACGCTTGTCTTCCTTCTTCG+TGG + Chr3:99480847-99480866 MsG0380017679.01.T01:CDS 50.0%
ACTCAGATGTGTAGGCAAGC+GGG - Chr3:99483023-99483042 None:intergenic 50.0%
AGCTTGGGAAGGGAGGATTT+GGG + Chr3:99478531-99478550 MsG0380017679.01.T01:CDS 50.0%
AGGACGATTGACCATGGAAG+AGG + Chr3:99481661-99481680 MsG0380017679.01.T01:CDS 50.0%
AGGGGCCTAATGTCAGGATT+TGG - Chr3:99481178-99481197 None:intergenic 50.0%
ATTGTTATGTCCCGTGGTGC+TGG + Chr3:99482507-99482526 MsG0380017679.01.T01:CDS 50.0%
CACGCTTGATTTCATCGCTG+AGG + Chr3:99475984-99476003 MsG0380017679.01.T01:intron 50.0%
CATTAGGCCCCTAAATACCG+AGG + Chr3:99481186-99481205 MsG0380017679.01.T01:intron 50.0%
CCATAGCTGGAGCTAGTAAC+GGG + Chr3:99482203-99482222 MsG0380017679.01.T01:intron 50.0%
CCCATTCGGACCTTCTTCTT+TGG - Chr3:99481701-99481720 None:intergenic 50.0%
CGTCCCTTGTAATGTACTCG+TGG - Chr3:99479080-99479099 None:intergenic 50.0%
CGTGCATTCGACCAAGAAGA+AGG + Chr3:99475809-99475828 MsG0380017679.01.T01:CDS 50.0%
CGTTGGCGTGATAGTTCAAC+TGG + Chr3:99480615-99480634 MsG0380017679.01.T01:CDS 50.0%
CTCATTATGGATGCTGGCAC+TGG + Chr3:99481960-99481979 MsG0380017679.01.T01:CDS 50.0%
CTCTGTAAATCCAGCACCAC+GGG - Chr3:99482520-99482539 None:intergenic 50.0%
CTGAGCACCCTCGGTATTTA+GGG - Chr3:99481197-99481216 None:intergenic 50.0%
GCATGTATTGGGTCCCTGTA+AGG - Chr3:99482381-99482400 None:intergenic 50.0%
GCCATAGCTGGAGCTAGTAA+CGG + Chr3:99482202-99482221 MsG0380017679.01.T01:intron 50.0%
GCTAGTGTGCATGCACATCT+TGG + Chr3:99480781-99480800 MsG0380017679.01.T01:CDS 50.0%
GCTCTGTAAATCCAGCACCA+CGG - Chr3:99482521-99482540 None:intergenic 50.0%
GCTTGCCTACACATCTGAGT+TGG + Chr3:99483023-99483042 MsG0380017679.01.T01:intron 50.0%
GGAAGACAAGCGTGTAAGCA+AGG - Chr3:99480840-99480859 None:intergenic 50.0%
GGAGTCTTTGTCGGATGAAC+CGG - Chr3:99475705-99475724 None:intergenic 50.0%
GGCTGTCTCAAAACTCGTCT+TGG + Chr3:99484028-99484047 MsG0380017679.01.T01:intron 50.0%
GGTGGCATGTATTGCAATCG+AGG + Chr3:99479376-99479395 MsG0380017679.01.T01:CDS 50.0%
GGTGTGCTTATATGGCCTGA+TGG + Chr3:99484193-99484212 MsG0380017679.01.T01:CDS 50.0%
GGTTATAGGACGCCGAAGTT+TGG - Chr3:99476576-99476595 None:intergenic 50.0%
GTACATTACAAGGGACGGCA+AGG + Chr3:99479083-99479102 MsG0380017679.01.T01:intron 50.0%
TAAGCATAATTGGAGGGGGG+GGG - Chr3:99483670-99483689 None:intergenic 50.0%
TAGGGTGAGGTCCATGCTAA+GGG + Chr3:99479823-99479842 MsG0380017679.01.T01:intron 50.0%
TCAGTGAGACGGTTTATGCG+AGG - Chr3:99477959-99477978 None:intergenic 50.0%
TCTGAGCACCCTCGGTATTT+AGG - Chr3:99481198-99481217 None:intergenic 50.0%
TGAGACGGTTTATGCGAGGT+CGG - Chr3:99477955-99477974 None:intergenic 50.0%
TGAGCACCCTCGGTATTTAG+GGG - Chr3:99481196-99481215 None:intergenic 50.0%
TGATCCTGGTACCCTTAGCA+TGG - Chr3:99479837-99479856 None:intergenic 50.0%
TGGGCAATTGTTATGTCCCG+TGG + Chr3:99482501-99482520 MsG0380017679.01.T01:CDS 50.0%
TGGGCACTCATTATGGATGC+TGG + Chr3:99481954-99481973 MsG0380017679.01.T01:CDS 50.0%
TTCATCCGACAAAGACTCCG+AGG + Chr3:99475706-99475725 MsG0380017679.01.T01:CDS 50.0%
TTCTTCGTGGTCGGTTACCT+TGG + Chr3:99480860-99480879 MsG0380017679.01.T01:CDS 50.0%
! AACCCAAGTTCCACTTGCTG+TGG + Chr3:99479924-99479943 MsG0380017679.01.T01:intron 50.0%
! ACAACTTACGCCAGGCATTG+AGG - Chr3:99476608-99476627 None:intergenic 50.0%
! CAAAGACTCCGAGGCATTTG+TGG + Chr3:99475715-99475734 MsG0380017679.01.T01:CDS 50.0%
! GAGGGTGAGACTCATTTTCC+TGG + Chr3:99479429-99479448 MsG0380017679.01.T01:intron 50.0%
! GGGAACTGGGTGCTATAAGT+AGG + Chr3:99483346-99483365 MsG0380017679.01.T01:intron 50.0%
! TCTATCACGGAGCACCACAA+TGG - Chr3:99478627-99478646 None:intergenic 50.0%
! TCTTGTTATCCAGAGGGGTG+AGG + Chr3:99479785-99479804 MsG0380017679.01.T01:intron 50.0%
! TGCTTTTGTCCTGCACCTTC+CGG + Chr3:99481065-99481084 MsG0380017679.01.T01:CDS 50.0%
! TGGTGCTGGATTTACAGAGC+AGG + Chr3:99482521-99482540 MsG0380017679.01.T01:CDS 50.0%
!! AAATACCGAGGGTGCTCAGA+AGG + Chr3:99481198-99481217 MsG0380017679.01.T01:intron 50.0%
!! AGCTAGTAACGGGTCCTCAT+TGG + Chr3:99482213-99482232 MsG0380017679.01.T01:intron 50.0%
!! TGGTGCCGTTGAGGTATGTA+CGG + Chr3:99478589-99478608 MsG0380017679.01.T01:intron 50.0%
!! TTCCACTTGCTGTGGCCTAT+GGG + Chr3:99479932-99479951 MsG0380017679.01.T01:intron 50.0%
AAGCATAATTGGAGGGGGGG+GGG - Chr3:99483669-99483688 None:intergenic 55.0%
AGGCCACAGCAAGTGGAACT+TGG - Chr3:99479930-99479949 None:intergenic 55.0%
ATTCCTTCTGGTCTGTGCGG+CGG - Chr3:99478025-99478044 None:intergenic 55.0%
CACAGACCAGAAGGAATCGG+AGG + Chr3:99478028-99478047 MsG0380017679.01.T01:intron 55.0%
CCCGTTACTAGCTCCAGCTA+TGG - Chr3:99482206-99482225 None:intergenic 55.0%
CCGATTCCTTCTGGTCTGTG+CGG - Chr3:99478028-99478047 None:intergenic 55.0%
CCGCACAGACCAGAAGGAAT+CGG + Chr3:99478025-99478044 MsG0380017679.01.T01:intron 55.0%
CTCATCCTCTCCTCAATGCC+TGG + Chr3:99476595-99476614 MsG0380017679.01.T01:intron 55.0%
CTTCTGCCTCCGATTCCTTC+TGG - Chr3:99478037-99478056 None:intergenic 55.0%
GAGACGGTTTATGCGAGGTC+GGG - Chr3:99477954-99477973 None:intergenic 55.0%
GATAGGAAGCTTGGGAAGGG+AGG + Chr3:99478524-99478543 MsG0380017679.01.T01:CDS 55.0%
GCACATCTCAGGTGCCAAAC+AGG - Chr3:99479963-99479982 None:intergenic 55.0%
GCCAAACAGGTTCACCCCAT+AGG - Chr3:99479950-99479969 None:intergenic 55.0%
GCCTATGGGGTGAACCTGTT+TGG + Chr3:99479946-99479965 MsG0380017679.01.T01:intron 55.0%
GGCCACAGCAAGTGGAACTT+GGG - Chr3:99479929-99479948 None:intergenic 55.0%
GTAGGGTGAGGTCCATGCTA+AGG + Chr3:99479822-99479841 MsG0380017679.01.T01:intron 55.0%
TAGCATGGACCTCACCCTAC+TGG - Chr3:99479822-99479841 None:intergenic 55.0%
TATAAGACCCGTGCGACGCA+CGG + Chr3:99477358-99477377 MsG0380017679.01.T01:intron 55.0%
TGTGTGGGAAAGCCGCTCAT+CGG - Chr3:99481876-99481895 None:intergenic 55.0%
TGTTCTTCCCCTGCCTGCAA+TGG + Chr3:99480240-99480259 MsG0380017679.01.T01:intron 55.0%
TTATAGCACCCAGTTCCCGC+TGG - Chr3:99483344-99483363 None:intergenic 55.0%
TTCTCATCAGGGGTTCCCGA+GGG - Chr3:99480482-99480501 None:intergenic 55.0%
TTTCTCATCAGGGGTTCCCG+AGG - Chr3:99480483-99480502 None:intergenic 55.0%
! ACGGGTCGGCGTTCTAGTTA+GGG + Chr3:99477377-99477396 MsG0380017679.01.T01:intron 55.0%
! CCGGAGCTTTATCGGCACTA+CGG - Chr3:99478221-99478240 None:intergenic 55.0%
! GAGTGGAGCTGCTTTGCTGA+AGG + Chr3:99478982-99479001 MsG0380017679.01.T01:intron 55.0%
! GTGTTGCTGGCTGACCCATT+CGG - Chr3:99481715-99481734 None:intergenic 55.0%
! TACAAACTGCCGGAAGGTGC+AGG - Chr3:99481077-99481096 None:intergenic 55.0%
! TTCGGCTCCCGGAGCTTTAT+CGG - Chr3:99478229-99478248 None:intergenic 55.0%
!! AGGTCCATGCTAAGGGTACC+AGG + Chr3:99479830-99479849 MsG0380017679.01.T01:intron 55.0%
!! CAGGCATTGAGGAGAGGATG+AGG - Chr3:99476597-99476616 None:intergenic 55.0%
!! CCGTAGTGCCGATAAAGCTC+CGG + Chr3:99478218-99478237 MsG0380017679.01.T01:CDS 55.0%
!! CGTAGTGCCGATAAAGCTCC+GGG + Chr3:99478219-99478238 MsG0380017679.01.T01:CDS 55.0%
!! GAGGGTGCTCAGAAGGTACT+TGG + Chr3:99481205-99481224 MsG0380017679.01.T01:intron 55.0%
!! GTTCCACTTGCTGTGGCCTA+TGG + Chr3:99479931-99479950 MsG0380017679.01.T01:intron 55.0%
!! TCCACTTGCTGTGGCCTATG+GGG + Chr3:99479933-99479952 MsG0380017679.01.T01:intron 55.0%
!! TTACGCCAGGCATTGAGGAG+AGG - Chr3:99476603-99476622 None:intergenic 55.0%
ACCCCATAGGCCACAGCAAG+TGG - Chr3:99479937-99479956 None:intergenic 60.0%
AGCATAATTGGAGGGGGGGG+GGG - Chr3:99483668-99483687 None:intergenic 60.0%
ATAAGACCCGTGCGACGCAC+GGG + Chr3:99477359-99477378 MsG0380017679.01.T01:intron 60.0%
CAGAACCAGCTCCTACGCGT+CGG - Chr3:99478571-99478590 None:intergenic 60.0%
CGGACCTCCACATGAATGGC+AGG + Chr3:99478923-99478942 MsG0380017679.01.T01:intron 60.0%
CTCCCTTCTTCTTCGGCTCC+CGG - Chr3:99478240-99478259 None:intergenic 60.0%
CTCCGGGAGCCGAAGAAGAA+GGG + Chr3:99478235-99478254 MsG0380017679.01.T01:CDS 60.0%
GCGGCGCGTTATCAGTGAGA+CGG - Chr3:99477970-99477989 None:intergenic 60.0%
GGCCACTGCTGGCACTAGAT+GGG + Chr3:99482482-99482501 MsG0380017679.01.T01:CDS 60.0%
GTCACTGCTATGGCCACTGC+TGG + Chr3:99482471-99482490 MsG0380017679.01.T01:CDS 60.0%
GTCTATGTTGGCCGACGCGT+AGG + Chr3:99478557-99478576 MsG0380017679.01.T01:CDS 60.0%
TAAGGCGAGACTCAGGCAGC+AGG - Chr3:99479516-99479535 None:intergenic 60.0%
TGCCCATCTAGTGCCAGCAG+TGG - Chr3:99482487-99482506 None:intergenic 60.0%
TGGCCACTGCTGGCACTAGA+TGG + Chr3:99482481-99482500 MsG0380017679.01.T01:CDS 60.0%
TGGGTCAGCCAGCAACACAG+TGG + Chr3:99481717-99481736 MsG0380017679.01.T01:CDS 60.0%
! CACGGGTCGGCGTTCTAGTT+AGG + Chr3:99477376-99477395 MsG0380017679.01.T01:intron 60.0%
! TGATAACGCGCCGCCGTTTC+CGG + Chr3:99477976-99477995 MsG0380017679.01.T01:intron 60.0%
!! AGCTGGTTCTGGTGCCGTTG+AGG + Chr3:99478580-99478599 MsG0380017679.01.T01:CDS 60.0%
CGAGGTCGGGTACGCAACTC+AGG - Chr3:99477941-99477960 None:intergenic 65.0%
GCTCCGGGAGCCGAAGAAGA+AGG + Chr3:99478234-99478253 MsG0380017679.01.T01:CDS 65.0%
! CGACGCGTAGGAGCTGGTTC+TGG + Chr3:99478569-99478588 MsG0380017679.01.T01:CDS 65.0%
CCACCGCCGCACAGACCAGA+AGG + Chr3:99478019-99478038 MsG0380017679.01.T01:intron 70.0%
CCTTCTGGTCTGTGCGGCGG+TGG - Chr3:99478022-99478041 None:intergenic 70.0%
GGCTCTCCTCCCGCCGGAAA+CGG - Chr3:99477992-99478011 None:intergenic 70.0%
GTTGGCCGACGCGTAGGAGC+TGG + Chr3:99478563-99478582 MsG0380017679.01.T01:CDS 70.0%
TAACGCGCCGCCGTTTCCGG+CGG + Chr3:99477979-99477998 MsG0380017679.01.T01:intron 70.0%
TCTCCTCCCGCCGGAAACGG+CGG - Chr3:99477989-99478008 None:intergenic 70.0%
AACGCGCCGCCGTTTCCGGC+GGG + Chr3:99477980-99477999 MsG0380017679.01.T01:intron 75.0%
ACGCCGACCCGTGCGTCGCA+CGG - Chr3:99477369-99477388 None:intergenic 75.0%
AGCGACGGCTCTCCTCCCGC+CGG - Chr3:99477998-99478017 None:intergenic 75.0%
CTGTGCGGCGGTGGCAGCGA+CGG - Chr3:99478013-99478032 None:intergenic 75.0%
GACCCGTGCGACGCACGGGT+CGG + Chr3:99477363-99477382 MsG0380017679.01.T01:intron 75.0%
! CGCCGACCCGTGCGTCGCAC+GGG - Chr3:99477368-99477387 None:intergenic 80.0%
! GCGCCGCCGTTTCCGGCGGG+AGG + Chr3:99477983-99478002 MsG0380017679.01.T01:intron 85.0%
Chromosome Type Strat End Strand Name
Chr3 gene 99475686 99484292 99475686 ID=MsG0380017679.01;Name=MsG0380017679.01
Chr3 mRNA 99475686 99484292 99475686 ID=MsG0380017679.01.T01;Parent=MsG0380017679.01;Name=MsG0380017679.01.T01;_AED=0.41;_eAED=0.41;_QI=0|0.57|0.53|0.93|1|1|15|0|595
Chr3 exon 99475686 99475914 99475686 ID=MsG0380017679.01.T01:exon:2636;Parent=MsG0380017679.01.T01
Chr3 exon 99478121 99478281 99478121 ID=MsG0380017679.01.T01:exon:2637;Parent=MsG0380017679.01.T01
Chr3 exon 99478491 99478601 99478491 ID=MsG0380017679.01.T01:exon:2638;Parent=MsG0380017679.01.T01
Chr3 exon 99479203 99479258 99479203 ID=MsG0380017679.01.T01:exon:2639;Parent=MsG0380017679.01.T01
Chr3 exon 99479361 99479432 99479361 ID=MsG0380017679.01.T01:exon:2640;Parent=MsG0380017679.01.T01
Chr3 exon 99480436 99480530 99480436 ID=MsG0380017679.01.T01:exon:2641;Parent=MsG0380017679.01.T01
Chr3 exon 99480610 99480676 99480610 ID=MsG0380017679.01.T01:exon:2642;Parent=MsG0380017679.01.T01
Chr3 exon 99480765 99480893 99480765 ID=MsG0380017679.01.T01:exon:2643;Parent=MsG0380017679.01.T01
Chr3 exon 99481002 99481089 99481002 ID=MsG0380017679.01.T01:exon:2644;Parent=MsG0380017679.01.T01
Chr3 exon 99481647 99481758 99481647 ID=MsG0380017679.01.T01:exon:2645;Parent=MsG0380017679.01.T01
Chr3 exon 99481856 99482028 99481856 ID=MsG0380017679.01.T01:exon:2646;Parent=MsG0380017679.01.T01
Chr3 exon 99482160 99482217 99482160 ID=MsG0380017679.01.T01:exon:2647;Parent=MsG0380017679.01.T01
Chr3 exon 99482439 99482542 99482439 ID=MsG0380017679.01.T01:exon:2648;Parent=MsG0380017679.01.T01
Chr3 exon 99482635 99482823 99482635 ID=MsG0380017679.01.T01:exon:2649;Parent=MsG0380017679.01.T01
Chr3 exon 99484149 99484292 99484149 ID=MsG0380017679.01.T01:exon:2650;Parent=MsG0380017679.01.T01
Chr3 CDS 99475686 99475914 99475686 ID=MsG0380017679.01.T01:cds;Parent=MsG0380017679.01.T01
Chr3 CDS 99478121 99478281 99478121 ID=MsG0380017679.01.T01:cds;Parent=MsG0380017679.01.T01
Chr3 CDS 99478491 99478601 99478491 ID=MsG0380017679.01.T01:cds;Parent=MsG0380017679.01.T01
Chr3 CDS 99479203 99479258 99479203 ID=MsG0380017679.01.T01:cds;Parent=MsG0380017679.01.T01
Chr3 CDS 99479361 99479432 99479361 ID=MsG0380017679.01.T01:cds;Parent=MsG0380017679.01.T01
Chr3 CDS 99480436 99480530 99480436 ID=MsG0380017679.01.T01:cds;Parent=MsG0380017679.01.T01
Chr3 CDS 99480610 99480676 99480610 ID=MsG0380017679.01.T01:cds;Parent=MsG0380017679.01.T01
Chr3 CDS 99480765 99480893 99480765 ID=MsG0380017679.01.T01:cds;Parent=MsG0380017679.01.T01
Chr3 CDS 99481002 99481089 99481002 ID=MsG0380017679.01.T01:cds;Parent=MsG0380017679.01.T01
Chr3 CDS 99481647 99481758 99481647 ID=MsG0380017679.01.T01:cds;Parent=MsG0380017679.01.T01
Chr3 CDS 99481856 99482028 99481856 ID=MsG0380017679.01.T01:cds;Parent=MsG0380017679.01.T01
Chr3 CDS 99482160 99482217 99482160 ID=MsG0380017679.01.T01:cds;Parent=MsG0380017679.01.T01
Chr3 CDS 99482439 99482542 99482439 ID=MsG0380017679.01.T01:cds;Parent=MsG0380017679.01.T01
Chr3 CDS 99482635 99482823 99482635 ID=MsG0380017679.01.T01:cds;Parent=MsG0380017679.01.T01
Chr3 CDS 99484149 99484292 99484149 ID=MsG0380017679.01.T01:cds;Parent=MsG0380017679.01.T01
Gene Sequence

>MsG0380017679.01.T01

ATGCCGAGTGTTAACTCCGGTTCATCCGACAAAGACTCCGAGGCATTTGTGGAAACTGATCCAACTGGTAGTTATGGTAGATATCCCGAACTATTAGTATGTGGTGCTGTGAAGAAAGTGTACCGTGCATTCGACCAAGAAGAAGGAATTGAGGTAGCATGGAACCAAGTGAAGTTAAGGAACTTCTGTGATGAACCTGCTATGATGAGAGGCTTTATTCTGAAGTTAGGAGTAGAGAGATTGAAAGAAGAGGAAGGAGAGAATAAGAAGAAGGCAGTGGTTAGGGTTTCTAGAGAGGAAGCTATGGATGAGTACGATAGTGGTGGCCGTAGTGCCGATAAAGCTCCGGGAGCCGAAGAAGAAGGGAGTACAACTCCACTTCCTGAGAAGATTCAAGTTGGTGGTTCTCCATTATATAGATTAGATAGGAAGCTTGGGAAGGGAGGATTTGGGCAAGTCTATGTTGGCCGACGCGTAGGAGCTGGTTCTGGTGCCGTTGAGGTCATGGATATGCTTGGCTCTAGTCTATGGGATGTTTGGAATAACAACTCACACACGATGTCTACTGAAATGGTGGCATGTATTGCAATCGAGGCTATCTCTATATTAGAGAAGATGCATTGTAGAGGATATGTGCATGGTGATGTAAAGCCTGAAAACTTCTTGCTTGGACCCTCGGGAACCCCTGATGAGAAAAAGTTGTTTCTGGTTGATCTTGGATTAGCAACTCGTTGGCGTGATAGTTCAACTGGCCTTCATGTTGATTATGATCAACGCCCAGATGTATTTAGGGGAACAGTTCGTTATGCTAGTGTGCATGCACATCTTGGTAGAACAAGTAGCAGGAGAGATGACTTGGAATCCCTTGCTTACACGCTTGTCTTCCTTCTTCGTGGTCGGTTACCTTGGCAAGATATCAGGGAGAAAATAAAGGATTTCTTGTCTGCAAGAAAAAGATGGCCACTTCACCCGAAGCTTTGTGTTGCTTTTGTCCTGCACCTTCCGGCAGTTGGACAAAAGAGAGGACGATTGACCATGGAAGAGGATGATGATGAACAACCAAAGAAGAAGGTCCGAATGGGTCAGCCAGCAACACAGTGGATTAGTGTTTACAATGCTCGTATCATTACAATGTGGCCGATGAGCGGCTTTCCCACACATTGTAAAAGAAATGAAGATGGTTTATTTATTAGCAGTGTGGCTTCTTGTGCTAGTCTTTGGGCACTCATTATGGATGCTGGCACTGGTTTCACATCACAAGTTTACGAACTCTCTTCCAGTTTTCTTCACAAGGAATGGATTATGGAACAGTGGGATAAGAATTATTACATCAGTGCCATAGCTGGAGCTATGGATCAACAAAAATGGAGGGAAGGATTTTTTGTCACTGCTATGGCCACTGCTGGCACTAGATGGGCAATTGTTATGTCCCGTGGTGCTGGATTTACAGAGCAGGTTGTGGAACTTGATTTCCTGTACCCTAGTGAAGGTATTCATCGAAGGTGGGAAAACAATTACCGCATTACTGCAACTGCTGCAACGCCTGATCAAGCTGCTTTTATTTTAAGTGTCCCAAGAAGAAAACCACCTGATGAAACTCAAGAAACGCTCCGCACGTCTGATTTTCCTAGTACTCATGTTAAGCCTGAGATTTGTGATGAATATAAATGTCTTATATGGATGAAACAGGTGTGCTTATATGGCCTGATGGCATCTGAGCTTCGTTCAAATGTTTTGGCTGTTACTGATGTACATTTCCTCCTCAAATCAGATGTTCAGGTTGTGTAG
Protein sequence

>MsG0380017679.01.T01

MPSVNSGSSDKDSEAFVETDPTGSYGRYPELLVCGAVKKVYRAFDQEEGIEVAWNQVKLRNFCDEPAMMRGFILKLGVERLKEEEGENKKKAVVRVSREEAMDEYDSGGRSADKAPGAEEEGSTTPLPEKIQVGGSPLYRLDRKLGKGGFGQVYVGRRVGAGSGAVEVMDMLGSSLWDVWNNNSHTMSTEMVACIAIEAISILEKMHCRGYVHGDVKPENFLLGPSGTPDEKKLFLVDLGLATRWRDSSTGLHVDYDQRPDVFRGTVRYASVHAHLGRTSSRRDDLESLAYTLVFLLRGRLPWQDIREKIKDFLSARKRWPLHPKLCVAFVLHLPAVGQKRGRLTMEEDDDEQPKKKVRMGQPATQWISVYNARIITMWPMSGFPTHCKRNEDGLFISSVASCASLWALIMDAGTGFTSQVYELSSSFLHKEWIMEQWDKNYYISAIAGAMDQQKWREGFFVTAMATAGTRWAIVMSRGAGFTEQVVELDFLYPSEGIHRRWENNYRITATAATPDQAAFILSVPRRKPPDETQETLRTSDFPSTHVKPEICDEYKCLIWMKQVCLYGLMASELRSNVLAVTDVHFLLKSDVQVV*