AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0380017825.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380017825.01.T01 MTR_3g113030 84.000 200 3 1 1 171 1 200 1.48e-119 337
MsG0380017825.01.T01 MTR_5g021270 65.734 143 45 2 1 139 1 143 1.49e-61 190
MsG0380017825.01.T01 MTR_5g021270 65.734 143 45 2 1 139 1 143 1.63e-61 190
MsG0380017825.01.T01 MTR_3g088615 46.043 139 75 0 1 139 1 139 1.53e-43 142
MsG0380017825.01.T01 MTR_1g029670 43.885 139 78 0 1 139 1 139 4.48e-39 131
MsG0380017825.01.T01 MTR_7g075850 46.154 143 73 2 1 139 1 143 3.38e-33 118
MsG0380017825.01.T01 MTR_2g009890 42.953 149 69 3 1 140 1 142 2.10e-32 117
MsG0380017825.01.T01 MTR_8g087860 45.455 143 75 2 1 140 17 159 3.23e-31 113
MsG0380017825.01.T01 MTR_4g102530 43.537 147 72 3 1 140 1 143 5.90e-31 111
MsG0380017825.01.T01 MTR_2g017865 45.517 145 72 2 1 140 16 158 1.29e-30 112
MsG0380017825.01.T01 MTR_3g005530 40.397 151 69 3 1 139 1 142 4.90e-30 109
MsG0380017825.01.T01 MTR_7g075870 43.624 149 70 4 1 140 1 144 7.74e-30 108
MsG0380017825.01.T01 MTR_3g452380 41.667 144 77 2 1 139 16 157 9.77e-30 109
MsG0380017825.01.T01 MTR_3g084980 43.262 141 75 1 1 136 1 141 1.83e-29 108
MsG0380017825.01.T01 MTR_8g033220 41.781 146 75 3 1 139 1 143 2.50e-29 107
MsG0380017825.01.T01 MTR_4g109830 44.138 145 75 2 1 140 1 144 3.11e-29 107
MsG0380017825.01.T01 MTR_8g033220 41.781 146 75 3 1 139 1 143 3.35e-29 107
MsG0380017825.01.T01 MTR_8g033270 43.056 144 75 2 1 139 1 142 7.21e-29 107
MsG0380017825.01.T01 MTR_7g016630 41.333 150 70 4 1 140 1 142 1.53e-28 106
MsG0380017825.01.T01 MTR_7g075870 42.282 149 71 4 1 140 1 143 1.75e-28 105
MsG0380017825.01.T01 MTR_7g016600 43.357 143 76 2 1 139 1 142 2.48e-28 105
MsG0380017825.01.T01 MTR_8g097090 44.681 141 73 2 1 136 1 141 5.98e-28 104
MsG0380017825.01.T01 MTR_5g046790 41.781 146 75 3 1 139 1 143 8.61e-28 103
MsG0380017825.01.T01 MTR_1g038300 37.162 148 85 1 1 140 1 148 1.07e-27 103
MsG0380017825.01.T01 MTR_8g066260 41.060 151 71 5 1 140 1 144 1.27e-27 103
MsG0380017825.01.T01 MTR_6g015975 42.657 143 77 2 1 139 1 142 1.43e-27 103
MsG0380017825.01.T01 MTR_5g031000 38.000 150 74 3 1 140 1 141 3.15e-27 102
MsG0380017825.01.T01 MTR_5g031000 39.333 150 72 4 1 140 1 141 3.98e-27 102
MsG0380017825.01.T01 MTR_6g464720 40.127 157 83 3 1 147 1 156 1.07e-26 101
MsG0380017825.01.T01 MTR_5g032520 45.714 140 57 5 1 129 1 132 1.97e-25 97.8
MsG0380017825.01.T01 MTR_4g109810 40.141 142 81 2 1 139 1 141 4.44e-25 97.4
MsG0380017825.01.T01 MTR_1g053070 38.217 157 70 4 1 140 1 147 5.33e-25 97.4
MsG0380017825.01.T01 MTR_5g032150 43.571 140 60 4 1 129 1 132 2.32e-24 95.1
MsG0380017825.01.T01 MTR_4g093970 41.611 149 74 5 1 140 27 171 2.48e-24 95.1
MsG0380017825.01.T01 MTR_5g066960 65.000 60 21 0 1 60 1 60 2.61e-24 90.1
MsG0380017825.01.T01 MTR_5g046870 56.944 72 30 1 1 72 1 71 1.15e-23 90.1
MsG0380017825.01.T01 MTR_4g036050 36.735 147 86 3 1 141 1 146 2.86e-23 91.3
MsG0380017825.01.T01 MTR_2g461710 64.407 59 21 0 1 59 1 59 3.34e-23 87.4
MsG0380017825.01.T01 MTR_4g036050 37.241 145 84 3 1 139 1 144 3.82e-23 90.5
MsG0380017825.01.T01 MTR_4g036050 37.241 145 84 3 1 139 1 144 8.06e-23 90.1
MsG0380017825.01.T01 MTR_4g036050 37.241 145 84 3 1 139 1 144 9.92e-23 90.1
MsG0380017825.01.T01 MTR_1g101970 36.496 137 79 2 1 131 1 135 1.65e-22 89.4
MsG0380017825.01.T01 MTR_5g066180 66.102 59 20 0 1 59 1 59 1.81e-22 90.1
MsG0380017825.01.T01 MTR_0003s0590 67.797 59 19 0 1 59 1 59 3.45e-22 90.1
MsG0380017825.01.T01 MTR_4g093030 67.797 59 19 0 1 59 1 59 7.43e-22 86.7
MsG0380017825.01.T01 MTR_3g102570 42.400 125 62 4 1 122 1 118 9.66e-20 84.3
MsG0380017825.01.T01 MTR_8g086290 34.320 169 89 6 2 151 12 177 1.51e-19 81.3
MsG0380017825.01.T01 MTR_4g084740 63.158 57 21 0 1 57 1 57 3.92e-19 83.2
MsG0380017825.01.T01 MTR_1g041615 60.000 55 22 0 13 67 17 71 5.24e-18 76.3
MsG0380017825.01.T01 MTR_8g051580 36.691 139 81 3 1 133 1 138 9.20e-18 76.6
MsG0380017825.01.T01 MTR_4g094632 34.074 135 68 4 1 135 1 114 1.09e-16 73.2
MsG0380017825.01.T01 MTR_2g105290 39.231 130 61 5 1 115 11 137 1.68e-16 73.2
MsG0380017825.01.T01 MTR_1g054265 48.387 62 32 0 1 62 1 62 1.42e-15 70.9
MsG0380017825.01.T01 MTR_8g079502 48.387 62 32 0 1 62 1 62 1.53e-15 70.9
MsG0380017825.01.T01 MTR_4g108720 56.604 53 23 0 1 53 1 53 2.36e-15 72.8
MsG0380017825.01.T01 MTR_1g108580 49.206 63 32 0 2 64 9 71 3.53e-15 70.9
MsG0380017825.01.T01 MTR_1g047550 50.000 60 30 0 1 60 1 60 4.04e-15 69.7
MsG0380017825.01.T01 MTR_1g063160 48.333 60 31 0 1 60 1 60 4.83e-15 69.3
MsG0380017825.01.T01 MTR_3g030770 34.375 128 70 3 2 128 9 123 5.17e-15 70.5
MsG0380017825.01.T01 MTR_8g046350 47.222 72 36 1 1 70 1 72 5.41e-15 68.9
MsG0380017825.01.T01 MTR_1g108510 47.619 63 33 0 2 64 9 71 6.04e-15 70.1
MsG0380017825.01.T01 MTR_7g028448 38.843 121 56 5 14 121 24 139 7.23e-15 68.9
MsG0380017825.01.T01 MTR_4g036915 38.843 121 56 5 14 121 24 139 7.23e-15 68.9
MsG0380017825.01.T01 MTR_2g093190 34.400 125 71 4 2 119 9 129 1.00e-14 69.7
MsG0380017825.01.T01 MTR_5g041650 56.604 53 23 0 1 53 38 90 1.04e-14 71.2
MsG0380017825.01.T01 MTR_2g085250 28.834 163 88 4 2 140 9 167 1.28e-14 69.3
MsG0380017825.01.T01 MTR_2g085280 28.834 163 88 4 2 140 9 167 1.39e-14 69.3
MsG0380017825.01.T01 MTR_3g052920 54.237 59 27 0 2 60 9 67 1.65e-14 68.9
MsG0380017825.01.T01 MTR_5g045560 48.438 64 33 0 1 64 8 71 2.57e-14 68.6
MsG0380017825.01.T01 MTR_4g094638 41.892 74 41 1 1 72 1 74 3.08e-14 67.4
MsG0380017825.01.T01 MTR_1g012570 47.143 70 35 1 2 71 9 76 3.91e-14 68.2
MsG0380017825.01.T01 MTR_1g077360 45.714 70 36 1 2 71 9 76 4.07e-14 68.2
MsG0380017825.01.T01 MTR_2g030740 49.206 63 32 0 2 64 9 71 4.33e-14 68.2
MsG0380017825.01.T01 MTR_1g075600 47.619 63 33 0 2 64 9 71 4.55e-14 67.8
MsG0380017825.01.T01 MTR_4g131030 46.667 60 32 0 1 60 1 60 5.75e-14 67.4
MsG0380017825.01.T01 MTR_1g105910 47.619 63 33 0 2 64 9 71 6.06e-14 67.8
MsG0380017825.01.T01 MTR_3g052870 45.714 70 36 1 2 71 9 76 6.38e-14 67.4
MsG0380017825.01.T01 MTR_1g105920 45.714 70 36 1 2 71 9 76 9.21e-14 67.0
MsG0380017825.01.T01 MTR_8g043650 47.619 63 33 0 2 64 9 71 1.04e-13 67.0
MsG0380017825.01.T01 MTR_5g055100 47.619 63 33 0 2 64 9 71 1.21e-13 66.6
MsG0380017825.01.T01 MTR_0121s0100 44.444 63 35 0 2 64 9 71 1.34e-13 64.7
MsG0380017825.01.T01 MTR_5g053390 45.714 70 36 1 2 71 9 76 1.37e-13 66.6
MsG0380017825.01.T01 MTR_1g106070 44.286 70 37 1 2 71 9 76 2.09e-13 65.1
MsG0380017825.01.T01 MTR_3g080940 40.845 71 40 1 1 71 8 76 1.99e-12 63.2
MsG0380017825.01.T01 MTR_0121s0080 46.667 60 32 0 5 64 12 71 3.71e-12 62.8
MsG0380017825.01.T01 MTR_3g067875 50.000 54 27 0 11 64 1 54 4.73e-12 58.9
MsG0380017825.01.T01 MTR_8g022970 35.870 92 57 1 3 92 19 110 1.19e-11 60.5
MsG0380017825.01.T01 MTR_6g018920 27.815 151 95 4 1 138 1 150 1.27e-11 62.0
MsG0380017825.01.T01 MTR_3g030780 39.189 74 43 1 2 75 9 80 1.52e-11 59.3
MsG0380017825.01.T01 MTR_1g105905 27.632 152 86 3 11 140 1 150 5.89e-11 59.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380017825.01.T01 AT3G54340 55.556 198 59 1 1 169 1 198 3.99e-74 222
MsG0380017825.01.T01 AT5G20240 44.604 139 77 0 1 139 1 139 4.79e-38 128
MsG0380017825.01.T01 AT5G20240 44.604 139 77 0 1 139 1 139 2.50e-37 128
MsG0380017825.01.T01 AT5G60910 47.945 146 68 3 1 140 1 144 6.40e-33 117
MsG0380017825.01.T01 AT4G11880 45.890 146 68 4 1 139 1 142 7.73e-32 113
MsG0380017825.01.T01 AT4G11880 45.890 146 68 4 1 139 1 142 7.73e-32 113
MsG0380017825.01.T01 AT4G11880 45.890 146 68 4 1 139 1 142 1.19e-31 114
MsG0380017825.01.T01 AT4G11880 45.890 146 68 4 1 139 1 142 1.19e-31 114
MsG0380017825.01.T01 AT3G57230 42.667 150 66 3 1 139 1 141 2.87e-31 110
MsG0380017825.01.T01 AT3G57230 43.046 151 66 3 1 140 1 142 3.58e-31 113
MsG0380017825.01.T01 AT3G57230 43.046 151 66 3 1 140 1 142 3.58e-31 113
MsG0380017825.01.T01 AT2G45660 43.137 153 62 3 1 139 1 142 8.08e-31 109
MsG0380017825.01.T01 AT4G09960 36.905 168 89 3 1 158 1 161 2.07e-30 110
MsG0380017825.01.T01 AT5G13790 47.260 146 64 4 1 140 1 139 2.70e-30 111
MsG0380017825.01.T01 AT4G09960 40.268 149 72 3 1 139 2 143 4.95e-30 110
MsG0380017825.01.T01 AT4G09960 40.268 149 72 3 1 139 1 142 5.05e-30 109
MsG0380017825.01.T01 AT2G45660 43.137 153 62 3 1 139 1 142 5.96e-30 109
MsG0380017825.01.T01 AT4G09960 40.268 149 72 3 1 139 11 152 7.47e-30 109
MsG0380017825.01.T01 AT4G18960 43.151 146 72 3 2 140 18 159 8.87e-30 109
MsG0380017825.01.T01 AT5G51870 40.667 150 71 6 1 139 1 143 9.21e-30 107
MsG0380017825.01.T01 AT4G09960 40.268 149 72 3 1 139 27 168 1.04e-29 109
MsG0380017825.01.T01 AT5G23260 38.462 169 102 1 1 167 1 169 1.06e-29 109
MsG0380017825.01.T01 AT4G22950 41.781 146 73 4 1 139 1 141 1.40e-29 107
MsG0380017825.01.T01 AT5G23260 42.254 142 80 1 1 140 1 142 2.06e-29 108
MsG0380017825.01.T01 AT4G37940 40.397 151 70 3 1 140 1 142 2.10e-29 106
MsG0380017825.01.T01 AT5G51870 40.667 150 71 6 1 139 24 166 3.09e-29 107
MsG0380017825.01.T01 AT5G23260 42.254 142 80 1 1 140 17 158 3.58e-29 108
MsG0380017825.01.T01 AT5G23260 42.553 141 79 1 1 139 17 157 3.74e-29 108
MsG0380017825.01.T01 AT5G51870 40.411 146 77 5 1 139 1 143 4.58e-29 106
MsG0380017825.01.T01 AT3G58780 40.816 147 76 3 1 140 22 164 4.63e-29 107
MsG0380017825.01.T01 AT4G22950 41.781 146 73 4 1 139 1 141 4.83e-29 107
MsG0380017825.01.T01 AT4G22950 41.781 146 73 4 1 139 1 141 4.83e-29 107
MsG0380017825.01.T01 AT3G58780 40.816 147 76 3 1 140 16 158 5.25e-29 107
MsG0380017825.01.T01 AT5G51870 40.411 146 77 5 1 139 1 143 6.66e-29 106
MsG0380017825.01.T01 AT3G02310 45.000 140 73 2 1 136 1 140 7.83e-29 105
MsG0380017825.01.T01 AT2G45650 42.657 143 76 2 1 139 1 141 8.67e-29 107
MsG0380017825.01.T01 AT4G37940 40.397 151 70 3 1 140 1 142 8.85e-29 106
MsG0380017825.01.T01 AT2G42830 41.781 146 74 3 1 139 16 157 9.52e-29 107
MsG0380017825.01.T01 AT4G37940 40.667 150 69 3 1 139 1 141 1.02e-28 106
MsG0380017825.01.T01 AT5G15800 45.139 144 73 3 1 139 1 143 1.04e-28 107
MsG0380017825.01.T01 AT5G51870 40.411 146 77 5 1 139 11 153 1.05e-28 106
MsG0380017825.01.T01 AT2G42830 41.781 146 74 3 1 139 16 157 1.06e-28 107
MsG0380017825.01.T01 AT4G09960 40.268 149 72 3 1 139 96 237 1.36e-28 108
MsG0380017825.01.T01 AT5G15800 45.139 144 73 3 1 139 1 143 1.54e-28 106
MsG0380017825.01.T01 AT3G58780 41.096 146 75 3 1 139 16 157 1.73e-28 107
MsG0380017825.01.T01 AT3G02310 45.000 140 73 2 1 136 1 140 1.97e-28 106
MsG0380017825.01.T01 AT3G58780 42.143 140 77 2 1 140 16 151 1.98e-28 105
MsG0380017825.01.T01 AT5G13790 45.455 143 68 3 1 140 1 136 2.20e-28 106
MsG0380017825.01.T01 AT1G24260 44.444 144 70 4 1 136 1 142 2.42e-27 103
MsG0380017825.01.T01 AT2G03710 39.161 143 83 1 1 139 1 143 2.89e-27 101
MsG0380017825.01.T01 AT3G30260 39.865 148 77 4 1 140 1 144 4.16e-27 102
MsG0380017825.01.T01 AT4G24540 38.272 162 93 2 1 157 1 160 4.71e-27 102
MsG0380017825.01.T01 AT1G24260 40.397 151 67 4 1 136 1 143 6.24e-27 102
MsG0380017825.01.T01 AT1G26310 41.781 146 79 2 1 140 1 146 6.55e-27 102
MsG0380017825.01.T01 AT1G24260 40.397 151 67 4 1 136 1 143 8.38e-27 102
MsG0380017825.01.T01 AT2G03710 39.161 143 83 1 1 139 1 143 8.70e-27 102
MsG0380017825.01.T01 AT2G03710 39.161 143 83 1 1 139 1 143 8.88e-27 102
MsG0380017825.01.T01 AT1G69120 42.177 147 75 4 1 140 1 144 2.01e-26 100
MsG0380017825.01.T01 AT2G14210 41.060 151 70 3 1 140 1 143 2.12e-26 100
MsG0380017825.01.T01 AT2G14210 41.060 151 70 3 1 140 1 143 2.60e-26 100
MsG0380017825.01.T01 AT1G69120 42.177 147 75 4 1 140 1 144 3.60e-26 100
MsG0380017825.01.T01 AT5G62165 37.671 146 80 3 1 139 1 142 5.50e-26 97.4
MsG0380017825.01.T01 AT5G62165 37.671 146 80 3 1 139 1 142 5.50e-26 97.4
MsG0380017825.01.T01 AT5G62165 37.671 146 80 3 1 139 1 142 5.50e-26 97.4
MsG0380017825.01.T01 AT5G62165 37.671 146 80 3 1 139 1 142 5.50e-26 97.4
MsG0380017825.01.T01 AT5G62165 37.671 146 80 3 1 139 1 142 5.50e-26 97.4
MsG0380017825.01.T01 AT5G62165 37.671 146 80 3 1 139 1 142 7.67e-26 97.1
MsG0380017825.01.T01 AT5G62165 37.671 146 80 3 1 139 1 142 7.67e-26 97.1
MsG0380017825.01.T01 AT5G62165 37.671 146 80 3 1 139 1 142 7.67e-26 97.1
MsG0380017825.01.T01 AT3G58780 35.882 170 77 3 1 140 16 183 1.06e-25 99.8
MsG0380017825.01.T01 AT5G51860 37.255 153 84 3 1 145 1 149 1.84e-25 97.4
MsG0380017825.01.T01 AT5G51860 37.255 153 84 3 1 145 1 149 2.08e-25 97.4
MsG0380017825.01.T01 AT5G62165 37.415 147 81 3 1 140 1 143 2.76e-25 96.7
MsG0380017825.01.T01 AT5G62165 37.415 147 81 3 1 140 1 143 2.76e-25 96.7
MsG0380017825.01.T01 AT2G22540 42.667 150 67 4 1 139 1 142 3.01e-25 97.8
MsG0380017825.01.T01 AT2G22540 42.667 150 67 4 1 139 1 142 3.01e-25 97.8
MsG0380017825.01.T01 AT3G61120 40.845 142 79 2 1 139 1 140 3.87e-25 97.4
MsG0380017825.01.T01 AT5G62165 37.671 146 80 3 1 139 1 142 6.65e-25 96.3
MsG0380017825.01.T01 AT5G62165 37.671 146 80 3 1 139 1 142 6.65e-25 96.3
MsG0380017825.01.T01 AT5G62165 37.671 146 80 3 1 139 1 142 6.65e-25 96.3
MsG0380017825.01.T01 AT2G22630 36.913 149 78 3 1 140 1 142 1.03e-24 95.9
MsG0380017825.01.T01 AT2G22630 36.913 149 78 3 1 140 1 142 1.03e-24 95.9
MsG0380017825.01.T01 AT2G22540 42.759 145 69 4 1 139 1 137 4.98e-23 91.7
MsG0380017825.01.T01 AT3G57390 35.762 151 83 3 1 139 1 149 5.65e-23 91.7
MsG0380017825.01.T01 AT3G57390 35.762 151 83 3 1 139 1 149 1.04e-22 91.3
MsG0380017825.01.T01 AT5G62165 65.000 60 21 0 1 60 1 60 1.33e-22 87.4
MsG0380017825.01.T01 AT1G71692 52.632 76 35 1 1 76 1 75 3.10e-21 86.7
MsG0380017825.01.T01 AT5G10140 34.667 150 72 3 1 139 1 135 1.68e-20 83.6
MsG0380017825.01.T01 AT5G10140 34.667 150 72 3 1 139 1 135 2.42e-20 83.6
MsG0380017825.01.T01 AT5G10140 34.667 150 72 3 1 139 1 135 2.73e-20 83.6
MsG0380017825.01.T01 AT5G10140 34.667 150 72 3 1 139 1 135 4.69e-20 82.8
MsG0380017825.01.T01 AT5G65070 33.094 139 89 2 1 139 1 135 4.84e-20 81.6
MsG0380017825.01.T01 AT5G65070 33.094 139 89 2 1 139 1 135 2.08e-19 81.6
MsG0380017825.01.T01 AT1G22130 66.667 54 18 0 1 54 1 54 8.33e-19 82.0
MsG0380017825.01.T01 AT1G77980 64.815 54 19 0 1 54 1 54 2.20e-18 80.9
MsG0380017825.01.T01 AT5G65080 32.374 139 90 2 1 139 8 142 3.19e-18 78.2
MsG0380017825.01.T01 AT5G65070 44.304 79 43 1 1 79 1 78 5.08e-18 78.6
MsG0380017825.01.T01 AT5G65050 32.857 140 88 3 1 139 1 135 6.19e-18 77.0
MsG0380017825.01.T01 AT5G65050 32.857 140 88 3 1 139 1 135 6.94e-18 77.0
MsG0380017825.01.T01 AT5G65070 44.304 79 43 1 1 79 1 78 8.21e-18 77.4
MsG0380017825.01.T01 AT5G65050 32.857 140 88 3 1 139 1 135 9.59e-18 77.0
MsG0380017825.01.T01 AT5G65080 33.094 139 88 3 1 139 8 141 1.12e-17 77.0
MsG0380017825.01.T01 AT5G65050 45.205 73 39 1 1 73 1 72 1.19e-17 76.6
MsG0380017825.01.T01 AT5G65070 52.542 59 28 0 1 59 1 59 7.17e-17 75.5
MsG0380017825.01.T01 AT5G65060 43.836 73 40 1 1 73 1 72 9.87e-17 74.3
MsG0380017825.01.T01 AT5G65060 43.836 73 40 1 1 73 1 72 1.12e-16 74.3
MsG0380017825.01.T01 AT5G65060 43.836 73 40 1 1 73 1 72 1.47e-16 73.9
MsG0380017825.01.T01 AT1G18750 58.491 53 22 0 1 53 1 53 2.13e-16 75.9
MsG0380017825.01.T01 AT1G18750 58.491 53 22 0 1 53 1 53 2.32e-16 75.9
MsG0380017825.01.T01 AT1G18750 58.491 53 22 0 1 53 1 53 2.69e-16 75.9
MsG0380017825.01.T01 AT1G31140 32.414 145 92 2 1 140 1 144 1.03e-15 72.0
MsG0380017825.01.T01 AT2G03060 39.785 93 55 1 1 93 1 92 1.87e-15 73.2
MsG0380017825.01.T01 AT2G03060 39.785 93 55 1 1 93 1 92 1.87e-15 73.2
MsG0380017825.01.T01 AT2G03060 39.785 93 55 1 1 93 1 92 1.87e-15 73.2
MsG0380017825.01.T01 AT2G03060 39.785 93 55 1 1 93 1 92 2.08e-15 73.2
MsG0380017825.01.T01 AT2G34440 30.872 149 79 3 1 128 1 146 2.25e-15 70.1
MsG0380017825.01.T01 AT1G72350 31.293 147 84 2 2 131 43 189 2.33e-15 71.2
MsG0380017825.01.T01 AT1G01530 50.000 60 30 0 1 60 6 65 4.42e-15 70.9
MsG0380017825.01.T01 AT1G31140 33.333 147 88 3 1 139 1 145 7.56e-15 69.7
MsG0380017825.01.T01 AT1G77950 53.704 54 25 0 1 54 1 54 1.57e-14 69.3
MsG0380017825.01.T01 AT1G77950 53.704 54 25 0 1 54 1 54 1.57e-14 69.3
MsG0380017825.01.T01 AT1G77950 53.704 54 25 0 1 54 1 54 1.57e-14 69.3
MsG0380017825.01.T01 AT1G77950 53.704 54 25 0 1 54 1 54 1.57e-14 69.3
MsG0380017825.01.T01 AT4G37435 50.847 59 29 0 1 59 1 59 2.56e-14 67.8
MsG0380017825.01.T01 AT1G47760 32.000 150 89 4 1 145 1 142 2.92e-14 67.8
MsG0380017825.01.T01 AT3G66656 48.333 60 31 0 1 60 1 60 4.41e-14 67.0
MsG0380017825.01.T01 AT1G77080 33.094 139 89 2 1 139 1 135 4.52e-14 67.4
MsG0380017825.01.T01 AT5G60440 32.680 153 84 6 2 150 7 144 5.27e-14 68.6
MsG0380017825.01.T01 AT1G77080 33.094 139 89 2 1 139 1 135 7.45e-14 66.2
MsG0380017825.01.T01 AT1G77080 33.094 139 89 2 1 139 1 135 7.80e-14 66.2
MsG0380017825.01.T01 AT1G77080 32.414 145 78 2 1 139 1 131 1.35e-13 65.1
MsG0380017825.01.T01 AT1G65360 45.161 62 34 0 1 62 6 67 1.56e-13 66.2
MsG0380017825.01.T01 AT1G77080 32.414 145 78 2 1 139 1 131 2.49e-13 65.1
MsG0380017825.01.T01 AT4G36590 50.820 61 30 0 2 62 7 67 3.03e-13 65.9
MsG0380017825.01.T01 AT1G69540 52.830 53 25 0 1 53 1 53 3.47e-13 66.6
MsG0380017825.01.T01 AT1G69540 52.830 53 25 0 1 53 1 53 4.17e-13 66.6
MsG0380017825.01.T01 AT1G77080 46.575 73 38 1 1 73 1 72 5.98e-13 64.7
MsG0380017825.01.T01 AT3G04100 43.860 57 32 0 5 61 17 73 7.70e-13 64.3
MsG0380017825.01.T01 AT2G24840 45.070 71 37 1 1 71 62 130 8.98e-13 64.7
MsG0380017825.01.T01 AT1G29962 41.429 70 39 1 2 69 8 77 6.07e-12 61.2
MsG0380017825.01.T01 AT1G28460 45.000 60 33 0 2 61 8 67 1.07e-11 60.8
MsG0380017825.01.T01 AT2G26320 38.356 73 45 0 1 73 17 89 9.78e-11 56.6

Find 62 sgRNAs with CRISPR-Local

Find 267 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTGATTGGATTCTCAAATTT+AGG 0.238867 3:+101052540 MsG0380017825.01.T01:CDS
GGCAAAGACCATACCATTAT+AGG 0.302269 3:+101048155 MsG0380017825.01.T01:five_prime_UTR
TGTTCTCTATTCTCTTGATC+TGG 0.318834 3:-101048345 None:intergenic
GAGAGATGCATTTCCTATAA+TGG 0.324383 3:-101048168 None:intergenic
CGTACTGTTTAAGATATATA+TGG 0.363912 3:+101052738 MsG0380017825.01.T01:three_prime_UTR
TCATAGTATCATATTATTGT+TGG 0.373157 3:-101052701 None:intergenic
ATGCTCCTCCAATGAGGATT+AGG 0.374790 3:-101052599 None:intergenic
AGAAACTGAAAGATGTCAAT+AGG 0.403479 3:+101048774 MsG0380017825.01.T01:CDS
GAGGCTTCTTGAGGATGAAA+TGG 0.410025 3:+101048957 MsG0380017825.01.T01:CDS
CACTGTTCTTTGTGATGCTA+AGG 0.422974 3:+101048432 MsG0380017825.01.T01:CDS
GGAATCTTCGCAAGGAGATT+AGG 0.438224 3:+101048795 MsG0380017825.01.T01:CDS
AGGTGAAGAAATATATAGAT+AGG 0.441320 3:+101048291 MsG0380017825.01.T01:five_prime_UTR
TTCATGAAGCTTGCCAGTGC+TGG 0.445387 3:-101048473 None:intergenic
ATCACATCATCTCATATCTC+TGG 0.456830 3:-101052894 None:intergenic
CTATACAGAGGGTAGGAACT+AGG 0.472093 3:+101048241 MsG0380017825.01.T01:five_prime_UTR
CATAAACAACAACAACAATC+AGG 0.488548 3:+101048271 MsG0380017825.01.T01:five_prime_UTR
CTACTCATCCTAATCCTCAT+TGG 0.488548 3:+101052591 MsG0380017825.01.T01:three_prime_UTR
GGGGAGTATGAGTCTGTGAT+TGG 0.494301 3:+101052525 MsG0380017825.01.T01:CDS
ATTATCATGTTCTCCAGCAC+TGG 0.494724 3:+101048460 MsG0380017825.01.T01:CDS
GAAGAAATATATAGATAGGT+AGG 0.499300 3:+101048295 MsG0380017825.01.T01:five_prime_UTR
GTACTACTAGGCAGAGGATG+GGG 0.500450 3:+101048902 MsG0380017825.01.T01:intron
ACAAAGAACAGTGAGTTCAT+TGG 0.504862 3:-101048422 None:intergenic
TTGTACTACTAGGCAGAGGA+TGG 0.518932 3:+101048900 MsG0380017825.01.T01:intron
TGGAGGAGCATCAGCTGCCT+CGG 0.520839 3:+101052611 MsG0380017825.01.T01:three_prime_UTR
CTTGCGCTCACGAATAGCCT+TGG 0.527148 3:-101048989 None:intergenic
TTGAAATGATGGACAATGGA+GGG 0.529931 3:+101052505 MsG0380017825.01.T01:CDS
TCTGTGGAACTCTCATTATG+AGG 0.531523 3:+101048657 MsG0380017825.01.T01:CDS
CCCTCTGTATAGATAAGTCT+TGG 0.535006 3:-101048230 None:intergenic
ATAGGTAGGTTATCTAGCTA+TGG 0.537597 3:+101048309 MsG0380017825.01.T01:exon
ATGCATTTCCTATAATGGTA+TGG 0.547155 3:-101048163 None:intergenic
GAAAGAAACATACGAGGCGG+AGG 0.547284 3:-101048506 None:intergenic
TGAAATGGACAAGGCTTCCA+AGG 0.547706 3:+101048972 MsG0380017825.01.T01:CDS
AAGAAGCCTCAGCTCTTCCA+TGG 0.549542 3:-101048944 None:intergenic
CAATGAGGATTAGGATGAGT+AGG 0.553651 3:-101052590 None:intergenic
CAAGGCTATTCGTGAGCGCA+AGG 0.555763 3:+101048990 MsG0380017825.01.T01:CDS
CTCATCCTAATCCTCATTGG+AGG 0.556125 3:+101052594 MsG0380017825.01.T01:three_prime_UTR
TGAAATGATGGACAATGGAG+GGG 0.558395 3:+101052506 MsG0380017825.01.T01:CDS
GATCAATATCAGATGACTGT+AGG 0.558840 3:+101048628 MsG0380017825.01.T01:CDS
TTATTGTTGGAAAGTGATTG+TGG 0.567585 3:-101052688 None:intergenic
ACTTACTCAAAACGAAGGAA+TGG 0.578899 3:+101048385 MsG0380017825.01.T01:CDS
GGAAGAGCTGAGGCTTCTTG+AGG 0.588608 3:+101048948 MsG0380017825.01.T01:CDS
TGTACTACTAGGCAGAGGAT+GGG 0.592453 3:+101048901 MsG0380017825.01.T01:intron
TGGCGTGCAATCACAGACAA+TGG 0.598626 3:-101048210 None:intergenic
CAAGCTCAATGCAACATGCG+TGG 0.600104 3:-101052564 None:intergenic
TTGTCCATCATTTCAAAACG+TGG 0.601318 3:-101052498 None:intergenic
AAAGAAACATACGAGGCGGA+GGG 0.606316 3:-101048505 None:intergenic
TACTACTAGGCAGAGGATGG+GGG 0.607689 3:+101048903 MsG0380017825.01.T01:intron
ACAGAGGGTAGGAACTAGGA+AGG 0.607895 3:+101048245 MsG0380017825.01.T01:five_prime_UTR
TCTTGAGGATGAAATGGACA+AGG 0.610930 3:+101048963 MsG0380017825.01.T01:CDS
GCCAAGACTTATCTATACAG+AGG 0.611724 3:+101048229 MsG0380017825.01.T01:five_prime_UTR
ATCTGACCATGGAAGAGCTG+AGG 0.615257 3:+101048938 MsG0380017825.01.T01:CDS
CCAAGACTTATCTATACAGA+GGG 0.622964 3:+101048230 MsG0380017825.01.T01:five_prime_UTR
TGTCAATAGGAATCTTCGCA+AGG 0.629338 3:+101048787 MsG0380017825.01.T01:CDS
AGGGTAAGTGGTGAGATCCG+AGG 0.633289 3:-101052628 None:intergenic
GACTTATCTATACAGAGGGT+AGG 0.637498 3:+101048234 MsG0380017825.01.T01:five_prime_UTR
CAGCTGATGCTCCTCCAATG+AGG 0.642096 3:-101052605 None:intergenic
GGTTATCTAGCTATGGCTCG+AGG 0.656910 3:+101048316 MsG0380017825.01.T01:exon
TTTGAAATGATGGACAATGG+AGG 0.672358 3:+101052504 MsG0380017825.01.T01:CDS
AAGTAACTTACTCAAAACGA+AGG 0.681799 3:+101048380 MsG0380017825.01.T01:CDS
AAGAAACATACGAGGCGGAG+GGG 0.689447 3:-101048504 None:intergenic
ATGTCTGAATGATCTGACCA+TGG 0.693311 3:+101048927 MsG0380017825.01.T01:CDS
TGACTGTAGGAATTGATCTG+TGG 0.697006 3:+101048641 MsG0380017825.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAAGTATTATAAATTTCTT+TGG + Chr3:101048821-101048840 MsG0380017825.01.T01:intron 10.0%
!! ATATATGATTCTATAATAAT+CGG - Chr3:101050795-101050814 None:intergenic 10.0%
!! ATATTTATATATAGGATTTA+GGG - Chr3:101048863-101048882 None:intergenic 10.0%
!! ATTAAAATTTATTAGATAGA+GGG - Chr3:101049212-101049231 None:intergenic 10.0%
!! TAAATTAGATAGAATATATA+TGG + Chr3:101052406-101052425 MsG0380017825.01.T01:intron 10.0%
!! TTAAAATTTATGTTCAAAAT+CGG + Chr3:101051037-101051056 MsG0380017825.01.T01:intron 10.0%
!!! AAAATTGATTGATTTAATTA+TGG + Chr3:101052454-101052473 MsG0380017825.01.T01:intron 10.0%
!!! AATATATTTTCGTTAATATT+TGG + Chr3:101051118-101051137 MsG0380017825.01.T01:intron 10.0%
!!! ACTATTTTCATAAAATATAT+TGG + Chr3:101049890-101049909 MsG0380017825.01.T01:intron 10.0%
!!! TTTGAGTTATTTAAAATTTA+TGG + Chr3:101049456-101049475 MsG0380017825.01.T01:intron 10.0%
!!! TTTTGAAAGAAAAAAAAAAT+AGG + Chr3:101050197-101050216 MsG0380017825.01.T01:intron 10.0%
!! AAGTACTTTCATTTATATAT+AGG + Chr3:101049035-101049054 MsG0380017825.01.T01:intron 15.0%
!! ACATATGCATATTTATATAT+AGG - Chr3:101048871-101048890 None:intergenic 15.0%
!! AGAAAAAATATTATCATCAT+TGG - Chr3:101051397-101051416 None:intergenic 15.0%
!! ATGTTTAAATTACACATAAA+AGG + Chr3:101050055-101050074 MsG0380017825.01.T01:intron 15.0%
!! CATATTTATATATAGGATTT+AGG - Chr3:101048864-101048883 None:intergenic 15.0%
!! CATTAAAATTTATTAGATAG+AGG - Chr3:101049213-101049232 None:intergenic 15.0%
!! TATGAAACAATTAAAAGAAA+AGG - Chr3:101048696-101048715 None:intergenic 15.0%
!! TTATTCATAATTTCATATCA+TGG - Chr3:101049690-101049709 None:intergenic 15.0%
!! TTTATGTGTAATTTAAACAT+GGG - Chr3:101050055-101050074 None:intergenic 15.0%
!!! ATAAATTTTGATATCATGAA+CGG + Chr3:101050587-101050606 MsG0380017825.01.T01:intron 15.0%
!!! TATTTCAATGTTCTTATTTT+TGG - Chr3:101051614-101051633 None:intergenic 15.0%
!!! TCATTTTATCTATAAATTAC+AGG + Chr3:101051859-101051878 MsG0380017825.01.T01:intron 15.0%
!!! TTTCATAATCTGTTTTTTTA+CGG + Chr3:101049332-101049351 MsG0380017825.01.T01:intron 15.0%
!!! TTTTATGTGTAATTTAAACA+TGG - Chr3:101050056-101050075 None:intergenic 15.0%
!! AAAAAAAGAACCAAGTTATT+AGG - Chr3:101051835-101051854 None:intergenic 20.0%
!! AACAAATAGAAATAAAGACT+TGG - Chr3:101050626-101050645 None:intergenic 20.0%
!! AGAAGTAACTAAAAAAGTAA+GGG - Chr3:101052650-101052669 None:intergenic 20.0%
!! ATAGTCAATATCTATCTATT+GGG - Chr3:101050925-101050944 None:intergenic 20.0%
!! ATGAAATCAAAATTTACAAC+AGG - Chr3:101051684-101051703 None:intergenic 20.0%
!! ATTGCATTTACTTGTAAAAT+CGG + Chr3:101051060-101051079 MsG0380017825.01.T01:intron 20.0%
!! CAATTAAAAGAAAAGGAAAA+TGG - Chr3:101048689-101048708 None:intergenic 20.0%
!! GCTATTAATTATTCATATCA+TGG - Chr3:101049814-101049833 None:intergenic 20.0%
!! GTAAAAAAACAGATTATGAA+AGG - Chr3:101049333-101049352 None:intergenic 20.0%
!! TAAAGAGAGAAATTTAGATA+TGG - Chr3:101050004-101050023 None:intergenic 20.0%
!! TAAATTTCTCTCTTTATGAA+TGG + Chr3:101050008-101050027 MsG0380017825.01.T01:intron 20.0%
!! TATAATAATCGGATAATGTT+AGG - Chr3:101050784-101050803 None:intergenic 20.0%
!! TATGCTAACTGAAAATTAAT+GGG - Chr3:101051939-101051958 None:intergenic 20.0%
!! TCATAAAATATATTGGAGAA+AGG + Chr3:101049897-101049916 MsG0380017825.01.T01:intron 20.0%
!! TCATAGTATCATATTATTGT+TGG - Chr3:101052704-101052723 None:intergenic 20.0%
!! TCTGATTTATATTATTGTCT+TGG + Chr3:101048579-101048598 MsG0380017825.01.T01:intron 20.0%
!! TTCATCACACATATAAATTA+AGG + Chr3:101049094-101049113 MsG0380017825.01.T01:intron 20.0%
!!! CACCAAATAATTTTTTTGAA+CGG - Chr3:101051314-101051333 None:intergenic 20.0%
!!! TGATGATAATATTTTTTCTG+AGG + Chr3:101051398-101051417 MsG0380017825.01.T01:intron 20.0%
!!! TTACAAAGCTTTTTCTTTTT+TGG - Chr3:101049777-101049796 None:intergenic 20.0%
!!! TTATATGTGTGATGAAATTT+TGG - Chr3:101049090-101049109 None:intergenic 20.0%
!!! TTGATTGATTTAATTATGGA+AGG + Chr3:101052458-101052477 MsG0380017825.01.T01:intron 20.0%
!!! TTTTTACAAAATGGACTTTT+AGG + Chr3:101049288-101049307 MsG0380017825.01.T01:intron 20.0%
! AAATTTCGAAATGGTTTAGT+TGG - Chr3:101050366-101050385 None:intergenic 25.0%
! AATTTCTATTAACTCTGTAC+TGG + Chr3:101051809-101051828 MsG0380017825.01.T01:intron 25.0%
! AGCCGTTCAAAAAAATTATT+TGG + Chr3:101051309-101051328 MsG0380017825.01.T01:intron 25.0%
! AGGTGAAGAAATATATAGAT+AGG + Chr3:101048291-101048310 MsG0380017825.01.T01:five_prime_UTR 25.0%
! ATAAAACAGATAGTGAAGTA+GGG + Chr3:101050700-101050719 MsG0380017825.01.T01:intron 25.0%
! ATAATTCCAAATTAGCTACA+AGG - Chr3:101049378-101049397 None:intergenic 25.0%
! ATAATTGAAGTGTATGTCAT+AGG - Chr3:101050413-101050432 None:intergenic 25.0%
! ATAATTTCATATCATGGCAA+AGG - Chr3:101049684-101049703 None:intergenic 25.0%
! ATCAAAATTTACAACAGGAT+TGG - Chr3:101051679-101051698 None:intergenic 25.0%
! ATGAACATATGACAAGTAAT+AGG + Chr3:101050747-101050766 MsG0380017825.01.T01:intron 25.0%
! ATGCTAACTGAAAATTAATG+GGG - Chr3:101051938-101051957 None:intergenic 25.0%
! ATGTACATGTCATTACATAT+GGG + Chr3:101050123-101050142 MsG0380017825.01.T01:intron 25.0%
! ATTTACTTGTAAAATCGGTT+TGG + Chr3:101051065-101051084 MsG0380017825.01.T01:intron 25.0%
! CATAGTCAATATCTATCTAT+TGG - Chr3:101050926-101050945 None:intergenic 25.0%
! CTATGCTAACTGAAAATTAA+TGG - Chr3:101051940-101051959 None:intergenic 25.0%
! GAAGAAATATATAGATAGGT+AGG + Chr3:101048295-101048314 MsG0380017825.01.T01:five_prime_UTR 25.0%
! GAGAAGTAACTAAAAAAGTA+AGG - Chr3:101052651-101052670 None:intergenic 25.0%
! TAGCATTATTGCTACTAAAA+TGG + Chr3:101049830-101049849 MsG0380017825.01.T01:intron 25.0%
! TATGTACATGTCATTACATA+TGG + Chr3:101050122-101050141 MsG0380017825.01.T01:intron 25.0%
! TCAAAATTTACAACAGGATT+GGG - Chr3:101051678-101051697 None:intergenic 25.0%
! TCAATTAAATTCTATGTCTC+TGG - Chr3:101049148-101049167 None:intergenic 25.0%
! TCATTCTATTTAAGTAAACC+AGG - Chr3:101052033-101052052 None:intergenic 25.0%
! TGACAATTGATTACAGTATA+AGG + Chr3:101052204-101052223 MsG0380017825.01.T01:intron 25.0%
! TTATATATAGGATTTAGGGA+AGG - Chr3:101048859-101048878 None:intergenic 25.0%
! TTTACACATGAGAGAATAAA+TGG + Chr3:101049953-101049972 MsG0380017825.01.T01:intron 25.0%
!! CCATTTTGTAAAAAGAACAT+GGG - Chr3:101049282-101049301 None:intergenic 25.0%
!! CGTACTGTTTAAGATATATA+TGG + Chr3:101052738-101052757 MsG0380017825.01.T01:three_prime_UTR 25.0%
!! GAAATTCAATAGTTTGCAAT+TGG - Chr3:101051795-101051814 None:intergenic 25.0%
!! TCCATTTTGTAAAAAGAACA+TGG - Chr3:101049283-101049302 None:intergenic 25.0%
!! TTAACTTATTTCTTGTTCAC+AGG + Chr3:101052272-101052291 MsG0380017825.01.T01:intron 25.0%
!! TTTTCTTTCAAAAAGTTGCT+TGG - Chr3:101050190-101050209 None:intergenic 25.0%
!!! AATACCAATTTTTCTAGTAG+CGG + Chr3:101051983-101052002 MsG0380017825.01.T01:intron 25.0%
!!! GCAATGTTTTAAATTGAGAA+AGG + Chr3:101051741-101051760 MsG0380017825.01.T01:intron 25.0%
AAAATTTACAACAGGATTGG+GGG - Chr3:101051676-101051695 None:intergenic 30.0%
AACACTTGAACTCAATTGTT+TGG - Chr3:101049583-101049602 None:intergenic 30.0%
AAGTAACTTACTCAAAACGA+AGG + Chr3:101048380-101048399 MsG0380017825.01.T01:CDS 30.0%
AAGTAGGGTTTATAAAGGTT+CGG + Chr3:101050715-101050734 MsG0380017825.01.T01:intron 30.0%
AAGTTCTCTTGCATATTCTA+TGG - Chr3:101048752-101048771 None:intergenic 30.0%
ACTAAAAAAGTAAGGGTAAG+TGG - Chr3:101052643-101052662 None:intergenic 30.0%
AGAAACTGAAAGATGTCAAT+AGG + Chr3:101048774-101048793 MsG0380017825.01.T01:CDS 30.0%
ATAAATAGAGAAGCTAGCTA+GGG - Chr3:101048537-101048556 None:intergenic 30.0%
ATGCATTTCCTATAATGGTA+TGG - Chr3:101048166-101048185 None:intergenic 30.0%
ATGTGTAAATTACACATGAG+AGG - Chr3:101049942-101049961 None:intergenic 30.0%
ATTTAAGTAAACCAGGAGAA+GGG - Chr3:101052026-101052045 None:intergenic 30.0%
CAAAATTTACAACAGGATTG+GGG - Chr3:101051677-101051696 None:intergenic 30.0%
CAACTTTACCTTCTTTCTTT+GGG - Chr3:101052251-101052270 None:intergenic 30.0%
CAATTGACGAAATTTCGAAA+TGG - Chr3:101050375-101050394 None:intergenic 30.0%
CAATTGAGTTCAAGTGTTTA+AGG + Chr3:101049585-101049604 MsG0380017825.01.T01:intron 30.0%
CATAAAACAGATAGTGAAGT+AGG + Chr3:101050699-101050718 MsG0380017825.01.T01:intron 30.0%
CATAAACAACAACAACAATC+AGG + Chr3:101048271-101048290 MsG0380017825.01.T01:five_prime_UTR 30.0%
CTCGTTAGCATAGTATATAT+AGG - Chr3:101052177-101052196 None:intergenic 30.0%
GTAGTTTAATAATGAGAGAG+AGG + Chr3:101052335-101052354 MsG0380017825.01.T01:intron 30.0%
GTGATTGGATTCTCAAATTT+AGG + Chr3:101052540-101052559 MsG0380017825.01.T01:CDS 30.0%
TAAAAAGAACATGGGCAATT+TGG - Chr3:101049274-101049293 None:intergenic 30.0%
TAAACCCATTACAACAAAAG+TGG + Chr3:101049549-101049568 MsG0380017825.01.T01:intron 30.0%
TAGTGAAGTAGGGTTTATAA+AGG + Chr3:101050710-101050729 MsG0380017825.01.T01:intron 30.0%
TATTTAAGTAAACCAGGAGA+AGG - Chr3:101052027-101052046 None:intergenic 30.0%
TTATTGTTGGAAAGTGATTG+TGG - Chr3:101052691-101052710 None:intergenic 30.0%
TTGGTATTAGCAATTTAGCA+TGG - Chr3:101051971-101051990 None:intergenic 30.0%
! AATGTATTATGTGAGAGTAC+CGG + Chr3:101049518-101049537 MsG0380017825.01.T01:intron 30.0%
! CCCATGTTCTTTTTACAAAA+TGG + Chr3:101049279-101049298 MsG0380017825.01.T01:intron 30.0%
! CTTTTCCAATAACAAATCGT+CGG + Chr3:101049610-101049629 MsG0380017825.01.T01:intron 30.0%
! TTTCAGTTAGCATAGACTTT+TGG + Chr3:101051945-101051964 MsG0380017825.01.T01:intron 30.0%
! TTTTCCAATAACAAATCGTC+GGG + Chr3:101049611-101049630 MsG0380017825.01.T01:intron 30.0%
!! GTTTTGAGTAAGTTACTTGT+CGG - Chr3:101048378-101048397 None:intergenic 30.0%
!! TCTTACAAAGTTGACTTGTA+AGG + Chr3:101050978-101050997 MsG0380017825.01.T01:intron 30.0%
!! TTTTCTGAGGATTACTCAAT+TGG + Chr3:101051411-101051430 MsG0380017825.01.T01:intron 30.0%
!!! AACTAACTTCGATGCTTTTT+TGG + Chr3:101051564-101051583 MsG0380017825.01.T01:intron 30.0%
!!! AGCTTTTTCTTTTTTGGTCT+TGG - Chr3:101049771-101049790 None:intergenic 30.0%
!!! ATTGCCACTTTTGTTGTAAT+GGG - Chr3:101049556-101049575 None:intergenic 30.0%
!!! CACTTTTAGAACTCATTAAG+AGG + Chr3:101050229-101050248 MsG0380017825.01.T01:intron 30.0%
AAACTGCAGAACTCTTCAAA+AGG - Chr3:101049427-101049446 None:intergenic 35.0%
AAATTTACAACAGGATTGGG+GGG - Chr3:101051675-101051694 None:intergenic 35.0%
AACTGCAGAACTCTTCAAAA+GGG - Chr3:101049426-101049445 None:intergenic 35.0%
ACAAAGAACAGTGAGTTCAT+TGG - Chr3:101048425-101048444 None:intergenic 35.0%
ACAACAAATTAACAGGTGAG+AGG - Chr3:101052131-101052150 None:intergenic 35.0%
ACACACAAATAGAGAAGTCA+GGG + Chr3:101050319-101050338 MsG0380017825.01.T01:intron 35.0%
ACCTAGTCACAACTTTCAAT+AGG + Chr3:101051450-101051469 MsG0380017825.01.T01:intron 35.0%
ACTTACTCAAAACGAAGGAA+TGG + Chr3:101048385-101048404 MsG0380017825.01.T01:CDS 35.0%
AGATATGGTGTGTGTTTGAA+TGG - Chr3:101049989-101050008 None:intergenic 35.0%
AGTAGGGTTTATAAAGGTTC+GGG + Chr3:101050716-101050735 MsG0380017825.01.T01:intron 35.0%
ATAGGTAGGTTATCTAGCTA+TGG + Chr3:101048309-101048328 MsG0380017825.01.T01:exon 35.0%
ATCACATCATCTCATATCTC+TGG - Chr3:101052897-101052916 None:intergenic 35.0%
ATGACAGACACAAATTAAGC+TGG - Chr3:101051721-101051740 None:intergenic 35.0%
ATTCTGCCTTGTAGCTAATT+TGG + Chr3:101049369-101049388 MsG0380017825.01.T01:intron 35.0%
ATTGGCAATGAATACACAGA+GGG - Chr3:101051379-101051398 None:intergenic 35.0%
CCAAAGAAAGAAGGTAAAGT+TGG + Chr3:101052249-101052268 MsG0380017825.01.T01:intron 35.0%
CCAACTTTACCTTCTTTCTT+TGG - Chr3:101052252-101052271 None:intergenic 35.0%
CCAAGACTTATCTATACAGA+GGG + Chr3:101048230-101048249 MsG0380017825.01.T01:five_prime_UTR 35.0%
CCATGATAGTAACATGAGAT+GGG + Chr3:101051647-101051666 MsG0380017825.01.T01:intron 35.0%
GAGAATCTAAGTTCGATTTC+GGG + Chr3:101049633-101049652 MsG0380017825.01.T01:intron 35.0%
GAGAGATGCATTTCCTATAA+TGG - Chr3:101048171-101048190 None:intergenic 35.0%
GATAAATAGAGAAGCTAGCT+AGG - Chr3:101048538-101048557 None:intergenic 35.0%
GATCAATATCAGATGACTGT+AGG + Chr3:101048628-101048647 MsG0380017825.01.T01:CDS 35.0%
GGAGAATCTAAGTTCGATTT+CGG + Chr3:101049632-101049651 MsG0380017825.01.T01:intron 35.0%
GTTAGAGAAAGAAACATACG+AGG - Chr3:101048515-101048534 None:intergenic 35.0%
TACACACAAATAGAGAAGTC+AGG + Chr3:101050318-101050337 MsG0380017825.01.T01:intron 35.0%
TACACTCGAGACAAATTGAT+TGG - Chr3:101052095-101052114 None:intergenic 35.0%
TCATGTTACTATCATGGACA+TGG - Chr3:101051644-101051663 None:intergenic 35.0%
TCCATGATAGTAACATGAGA+TGG + Chr3:101051646-101051665 MsG0380017825.01.T01:intron 35.0%
TGACAGACACAAATTAAGCT+GGG - Chr3:101051720-101051739 None:intergenic 35.0%
TGTGACTATTGGCATGATAT+GGG + Chr3:101050881-101050900 MsG0380017825.01.T01:intron 35.0%
TGTGTTTGTGTTGTACTACT+AGG + Chr3:101048890-101048909 MsG0380017825.01.T01:intron 35.0%
TGTTCTCTATTCTCTTGATC+TGG - Chr3:101048348-101048367 None:intergenic 35.0%
TTGGTGCAGAATAAGGATAT+TGG + Chr3:101051084-101051103 MsG0380017825.01.T01:intron 35.0%
TTGTCCATCATTTCAAAACG+TGG - Chr3:101052501-101052520 None:intergenic 35.0%
TTTAAGTAAACCAGGAGAAG+GGG - Chr3:101052025-101052044 None:intergenic 35.0%
TTTCATATCATGGCAAAGGA+AGG - Chr3:101049680-101049699 None:intergenic 35.0%
TTTGCCGCTACTAGAAAAAT+TGG - Chr3:101051990-101052009 None:intergenic 35.0%
! ACTAGGTTGAACAAATGAAG+GGG - Chr3:101051437-101051456 None:intergenic 35.0%
! ATTTTGTCCAGATATTGGAG+TGG + Chr3:101051474-101051493 MsG0380017825.01.T01:intron 35.0%
! CTTATTTCTTGTTCACAGGT+AGG + Chr3:101052276-101052295 MsG0380017825.01.T01:intron 35.0%
! GACATTTGAAGTGTGACTAT+TGG + Chr3:101050870-101050889 MsG0380017825.01.T01:intron 35.0%
! GACTAGGTTGAACAAATGAA+GGG - Chr3:101051438-101051457 None:intergenic 35.0%
! GTGAAAAGTATGCCAACATT+CGG + Chr3:101051331-101051350 MsG0380017825.01.T01:intron 35.0%
! TAGGCATTTTGTCCAGATAT+TGG + Chr3:101051469-101051488 MsG0380017825.01.T01:intron 35.0%
! TGACTAGGTTGAACAAATGA+AGG - Chr3:101051439-101051458 None:intergenic 35.0%
! TTTGCAATTGGTTCTTGTAG+TGG - Chr3:101051783-101051802 None:intergenic 35.0%
! TTTTGTCCAGATATTGGAGT+GGG + Chr3:101051475-101051494 MsG0380017825.01.T01:intron 35.0%
!! AAAAGCATCGAAGTTAGTTG+TGG - Chr3:101051563-101051582 None:intergenic 35.0%
!! AAGGAATGGTCTTTTCAAGA+AGG + Chr3:101048399-101048418 MsG0380017825.01.T01:CDS 35.0%
!! AAGTTGACTTGTAAGGTCAA+TGG + Chr3:101050985-101051004 MsG0380017825.01.T01:intron 35.0%
!! GGGGAAACAATTTGATTTTG+TGG - Chr3:101051919-101051938 None:intergenic 35.0%
!! TAATGGGTTTAGAGTATCAC+CGG - Chr3:101049540-101049559 None:intergenic 35.0%
!! TTGAAATGATGGACAATGGA+GGG + Chr3:101052505-101052524 MsG0380017825.01.T01:CDS 35.0%
!! TTTGAAATGATGGACAATGG+AGG + Chr3:101052504-101052523 MsG0380017825.01.T01:CDS 35.0%
!!! AGATCCACGTTTTGAAATGA+TGG + Chr3:101052494-101052513 MsG0380017825.01.T01:CDS 35.0%
!!! CGTTTTGAAATGATGGACAA+TGG + Chr3:101052501-101052520 MsG0380017825.01.T01:CDS 35.0%
!!! GATTGCCACTTTTGTTGTAA+TGG - Chr3:101049557-101049576 None:intergenic 35.0%
AATCTAAGTTCGATTTCGGG+TGG + Chr3:101049636-101049655 MsG0380017825.01.T01:intron 40.0%
AGAGAAAGAAACATACGAGG+CGG - Chr3:101048512-101048531 None:intergenic 40.0%
ATATACATACCAAGTCACGC+AGG - Chr3:101052374-101052393 None:intergenic 40.0%
ATGAATACACAGAGGGAACT+TGG - Chr3:101051372-101051391 None:intergenic 40.0%
ATGTCTGAATGATCTGACCA+TGG + Chr3:101048927-101048946 MsG0380017825.01.T01:CDS 40.0%
ATTATCATGTTCTCCAGCAC+TGG + Chr3:101048460-101048479 MsG0380017825.01.T01:CDS 40.0%
ATTGCATGATGCCTTGAATG+TGG - Chr3:101051533-101051552 None:intergenic 40.0%
ATTGGAGAAAGGAATCGAGA+GGG + Chr3:101049908-101049927 MsG0380017825.01.T01:intron 40.0%
CAATCCTAGATGTGAGATGT+AGG - Chr3:101050850-101050869 None:intergenic 40.0%
CAATGAGGATTAGGATGAGT+AGG - Chr3:101052593-101052612 None:intergenic 40.0%
CACTGTTCTTTGTGATGCTA+AGG + Chr3:101048432-101048451 MsG0380017825.01.T01:CDS 40.0%
CATTGGCAATGAATACACAG+AGG - Chr3:101051380-101051399 None:intergenic 40.0%
CCAACATTCGGCTCAAAATT+GGG + Chr3:101051343-101051362 MsG0380017825.01.T01:intron 40.0%
CCCATCTCATGTTACTATCA+TGG - Chr3:101051650-101051669 None:intergenic 40.0%
CCCTCTGTATAGATAAGTCT+TGG - Chr3:101048233-101048252 None:intergenic 40.0%
CGAGACAAATTGATTGGACA+AGG - Chr3:101052089-101052108 None:intergenic 40.0%
CGTCAATTGAATTAGACCTG+TGG + Chr3:101050386-101050405 MsG0380017825.01.T01:intron 40.0%
CTACTCATCCTAATCCTCAT+TGG + Chr3:101052591-101052610 MsG0380017825.01.T01:three_prime_UTR 40.0%
GAACTGAGATAAGCTCATGT+TGG - Chr3:101050168-101050187 None:intergenic 40.0%
GACTTATCTATACAGAGGGT+AGG + Chr3:101048234-101048253 MsG0380017825.01.T01:five_prime_UTR 40.0%
GATTGACACCCAAAGAAAGA+AGG + Chr3:101052240-101052259 MsG0380017825.01.T01:intron 40.0%
GCCAAGACTTATCTATACAG+AGG + Chr3:101048229-101048248 MsG0380017825.01.T01:five_prime_UTR 40.0%
GCCTATTGAAAGTTGTGACT+AGG - Chr3:101051454-101051473 None:intergenic 40.0%
GGCAAAGACCATACCATTAT+AGG + Chr3:101048155-101048174 MsG0380017825.01.T01:five_prime_UTR 40.0%
GTGTGACTATTGGCATGATA+TGG + Chr3:101050880-101050899 MsG0380017825.01.T01:intron 40.0%
TATTGGAGAAAGGAATCGAG+AGG + Chr3:101049907-101049926 MsG0380017825.01.T01:intron 40.0%
TCTGTGGAACTCTCATTATG+AGG + Chr3:101048657-101048676 MsG0380017825.01.T01:CDS 40.0%
TCTTGAGGATGAAATGGACA+AGG + Chr3:101048963-101048982 MsG0380017825.01.T01:CDS 40.0%
TGACTGTAGGAATTGATCTG+TGG + Chr3:101048641-101048660 MsG0380017825.01.T01:CDS 40.0%
TGAGATAAGCTCATGTTGGT+TGG - Chr3:101050164-101050183 None:intergenic 40.0%
TGTCAATAGGAATCTTCGCA+AGG + Chr3:101048787-101048806 MsG0380017825.01.T01:CDS 40.0%
! ACATTCAAGGCATCATGCAA+TGG + Chr3:101051532-101051551 MsG0380017825.01.T01:intron 40.0%
! CTACATCTCACATCTAGGAT+TGG + Chr3:101050848-101050867 MsG0380017825.01.T01:intron 40.0%
! TCTGTACTGGCCTAATAACT+TGG + Chr3:101051822-101051841 MsG0380017825.01.T01:intron 40.0%
! TTCTTTCGCACTTTTGTGTG+TGG - Chr3:101051180-101051199 None:intergenic 40.0%
!! AATCGGTTTGGTGCAGAATA+AGG + Chr3:101051077-101051096 MsG0380017825.01.T01:intron 40.0%
!! ACCTTGATTTGCCACATTCA+AGG + Chr3:101051519-101051538 MsG0380017825.01.T01:intron 40.0%
!! TGAAATGATGGACAATGGAG+GGG + Chr3:101052506-101052525 MsG0380017825.01.T01:CDS 40.0%
!! TTCTCCCGACGATTTGTTAT+TGG - Chr3:101049618-101049637 None:intergenic 40.0%
AAAGAAACATACGAGGCGGA+GGG - Chr3:101048508-101048527 None:intergenic 45.0%
AGATATTGGAGTGGGTGATG+AGG + Chr3:101051483-101051502 MsG0380017825.01.T01:intron 45.0%
AGTGTATGTCATAGGACCAC+AGG - Chr3:101050405-101050424 None:intergenic 45.0%
ATGCTCCTCCAATGAGGATT+AGG - Chr3:101052602-101052621 None:intergenic 45.0%
ATGTGAGATGTAGGTGGGAA+TGG - Chr3:101050841-101050860 None:intergenic 45.0%
CAGGGTTTAAATCCCGATCA+CGG + Chr3:101050337-101050356 MsG0380017825.01.T01:intron 45.0%
CCTAGATGTGAGATGTAGGT+GGG - Chr3:101050846-101050865 None:intergenic 45.0%
CTATACAGAGGGTAGGAACT+AGG + Chr3:101048241-101048260 MsG0380017825.01.T01:five_prime_UTR 45.0%
CTCATCCTAATCCTCATTGG+AGG + Chr3:101052594-101052613 MsG0380017825.01.T01:three_prime_UTR 45.0%
GAGGCTTCTTGAGGATGAAA+TGG + Chr3:101048957-101048976 MsG0380017825.01.T01:CDS 45.0%
GCCAACATTCGGCTCAAAAT+TGG + Chr3:101051342-101051361 MsG0380017825.01.T01:intron 45.0%
GCCTTGAATGTGGCAAATCA+AGG - Chr3:101051523-101051542 None:intergenic 45.0%
GGAATCTTCGCAAGGAGATT+AGG + Chr3:101048795-101048814 MsG0380017825.01.T01:CDS 45.0%
TCATCACCCACTCCAATATC+TGG - Chr3:101051484-101051503 None:intergenic 45.0%
TCCTAGATGTGAGATGTAGG+TGG - Chr3:101050847-101050866 None:intergenic 45.0%
TGAAATGGACAAGGCTTCCA+AGG + Chr3:101048972-101048991 MsG0380017825.01.T01:CDS 45.0%
TGTACTACTAGGCAGAGGAT+GGG + Chr3:101048901-101048920 MsG0380017825.01.T01:intron 45.0%
TGTGTTGTACTACTAGGCAG+AGG + Chr3:101048896-101048915 MsG0380017825.01.T01:intron 45.0%
TTGGAGAAAGGAATCGAGAG+GGG + Chr3:101049909-101049928 MsG0380017825.01.T01:intron 45.0%
TTGTACTACTAGGCAGAGGA+TGG + Chr3:101048900-101048919 MsG0380017825.01.T01:intron 45.0%
! CCCAATTTTGAGCCGAATGT+TGG - Chr3:101051346-101051365 None:intergenic 45.0%
!! ATATTAAAAGTTATATTTAT+TGG + Chr3:101048715-101048734 MsG0380017825.01.T01:intron 5.0%
AAGAAACATACGAGGCGGAG+GGG - Chr3:101048507-101048526 None:intergenic 50.0%
AAGAAGCCTCAGCTCTTCCA+TGG - Chr3:101048947-101048966 None:intergenic 50.0%
ACAGAGGGTAGGAACTAGGA+AGG + Chr3:101048245-101048264 MsG0380017825.01.T01:five_prime_UTR 50.0%
ATCTGACCATGGAAGAGCTG+AGG + Chr3:101048938-101048957 MsG0380017825.01.T01:CDS 50.0%
CAAGCTCAATGCAACATGCG+TGG - Chr3:101052567-101052586 None:intergenic 50.0%
CCCACCTACATCTCACATCT+AGG + Chr3:101050843-101050862 MsG0380017825.01.T01:intron 50.0%
CTATTGGGTCACCTGCTATC+AGG - Chr3:101050910-101050929 None:intergenic 50.0%
GAAAGAAACATACGAGGCGG+AGG - Chr3:101048509-101048528 None:intergenic 50.0%
GAAAGGAATCGAGAGGGGAA+AGG + Chr3:101049914-101049933 MsG0380017825.01.T01:intron 50.0%
GAGAAAGGACCACACAGTAC+TGG + Chr3:101051756-101051775 MsG0380017825.01.T01:intron 50.0%
GATATGGGTGACCTGATAGC+AGG + Chr3:101050896-101050915 MsG0380017825.01.T01:intron 50.0%
GGTTATCTAGCTATGGCTCG+AGG + Chr3:101048316-101048335 MsG0380017825.01.T01:exon 50.0%
GTACTACTAGGCAGAGGATG+GGG + Chr3:101048902-101048921 MsG0380017825.01.T01:intron 50.0%
GTTTAGTTGGACGCCGTGAT+CGG - Chr3:101050353-101050372 None:intergenic 50.0%
TACTACTAGGCAGAGGATGG+GGG + Chr3:101048903-101048922 MsG0380017825.01.T01:intron 50.0%
TGGCGTGCAATCACAGACAA+TGG - Chr3:101048213-101048232 None:intergenic 50.0%
TTCATGAAGCTTGCCAGTGC+TGG - Chr3:101048476-101048495 None:intergenic 50.0%
TTTAGTTGGACGCCGTGATC+GGG - Chr3:101050352-101050371 None:intergenic 50.0%
! GGGGAGTATGAGTCTGTGAT+TGG + Chr3:101052525-101052544 MsG0380017825.01.T01:CDS 50.0%
!! TGTAGTGGACCAGTACTGTG+TGG - Chr3:101051768-101051787 None:intergenic 50.0%
AGGGTAAGTGGTGAGATCCG+AGG - Chr3:101052631-101052650 None:intergenic 55.0%
CAACAGACTCCTGCGTGACT+TGG + Chr3:101052362-101052381 MsG0380017825.01.T01:intron 55.0%
CAAGGCTATTCGTGAGCGCA+AGG + Chr3:101048990-101049009 MsG0380017825.01.T01:CDS 55.0%
CAGCTGATGCTCCTCCAATG+AGG - Chr3:101052608-101052627 None:intergenic 55.0%
CTTGCGCTCACGAATAGCCT+TGG - Chr3:101048992-101049011 None:intergenic 55.0%
GGAAGAGCTGAGGCTTCTTG+AGG + Chr3:101048948-101048967 MsG0380017825.01.T01:CDS 55.0%
CAGGAGAAGGGGACGCATAG+AGG - Chr3:101052014-101052033 None:intergenic 60.0%
CTCTATGCGTCCCCTTCTCC+TGG + Chr3:101052012-101052031 MsG0380017825.01.T01:intron 60.0%
!! TGGAGGAGCATCAGCTGCCT+CGG + Chr3:101052611-101052630 MsG0380017825.01.T01:three_prime_UTR 60.0%
Chromosome Type Strat End Strand Name
Chr3 gene 101048155 101052935 101048155 ID=MsG0380017825.01;Name=MsG0380017825.01
Chr3 mRNA 101048155 101052935 101048155 ID=MsG0380017825.01.T01;Parent=MsG0380017825.01;Name=MsG0380017825.01.T01;_AED=0.39;_eAED=0.39;_QI=173|0.75|1|1|1|1|5|354|172
Chr3 exon 101048155 101048515 101048155 ID=MsG0380017825.01.T01:exon:2847;Parent=MsG0380017825.01.T01
Chr3 exon 101048612 101048678 101048612 ID=MsG0380017825.01.T01:exon:2848;Parent=MsG0380017825.01.T01
Chr3 exon 101048755 101048816 101048755 ID=MsG0380017825.01.T01:exon:2849;Parent=MsG0380017825.01.T01
Chr3 exon 101048912 101049011 101048912 ID=MsG0380017825.01.T01:exon:2850;Parent=MsG0380017825.01.T01
Chr3 exon 101052480 101052935 101052480 ID=MsG0380017825.01.T01:exon:2851;Parent=MsG0380017825.01.T01
Chr3 five_prime_UTR 101048155 101048327 101048155 ID=MsG0380017825.01.T01:five_prime_utr;Parent=MsG0380017825.01.T01
Chr3 CDS 101048328 101048515 101048328 ID=MsG0380017825.01.T01:cds;Parent=MsG0380017825.01.T01
Chr3 CDS 101048612 101048678 101048612 ID=MsG0380017825.01.T01:cds;Parent=MsG0380017825.01.T01
Chr3 CDS 101048755 101048816 101048755 ID=MsG0380017825.01.T01:cds;Parent=MsG0380017825.01.T01
Chr3 CDS 101048912 101049011 101048912 ID=MsG0380017825.01.T01:cds;Parent=MsG0380017825.01.T01
Chr3 CDS 101052480 101052581 101052480 ID=MsG0380017825.01.T01:cds;Parent=MsG0380017825.01.T01
Chr3 three_prime_UTR 101052582 101052935 101052582 ID=MsG0380017825.01.T01:three_prime_utr;Parent=MsG0380017825.01.T01
Gene Sequence

>MsG0380017825.01.T01

ATGGCTCGAGGAAAGATCCAGATCAAGAGAATAGAGAACACAACGAACCGACAAGTAACTTACTCAAAACGAAGGAATGGTCTTTTCAAGAAGGCCAATGAACTCACTGTTCTTTGTGATGCTAAGGTTTCTATTATCATGTTCTCCAGCACTGGCAAGCTTCATGAATACATTAGCCCCTCCGCCTCAACAAAGCAGTTTTTCGATCAATATCAGATGACTGTAGGAATTGATCTGTGGAACTCTCATTATGAGAATATGCAAGAGAACTTAAAGAAACTGAAAGATGTCAATAGGAATCTTCGCAAGGAGATTAGGCAGAGGATGGGGGAATGTCTGAATGATCTGACCATGGAAGAGCTGAGGCTTCTTGAGGATGAAATGGACAAGGCTTCCAAGGCTATTCGTGAGCGCAAGGATGCAAGAGCAGAAGATCCACGTTTTGAAATGATGGACAATGGAGGGGAGTATGAGTCTGTGATTGGATTCTCAAATTTAGGTCCACGCATGTTGCATTGA

Protein sequence

>MsG0380017825.01.T01

MARGKIQIKRIENTTNRQVTYSKRRNGLFKKANELTVLCDAKVSIIMFSSTGKLHEYISPSASTKQFFDQYQMTVGIDLWNSHYENMQENLKKLKDVNRNLRKEIRQRMGECLNDLTMEELRLLEDEMDKASKAIRERKDARAEDPRFEMMDNGGEYESVIGFSNLGPRMLH*