AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0480018083.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480018083.01.T01 MTR_2g100470 52.823 248 67 5 4 203 247 492 3.18e-66 219
MsG0480018083.01.T01 MTR_2g100470 70.339 118 33 1 152 269 509 624 1.87e-46 166
MsG0480018083.01.T01 MTR_2g100450 51.724 232 63 5 4 189 56 284 9.14e-61 203
MsG0480018083.01.T01 MTR_2g100450 85.714 84 12 0 186 269 358 441 1.35e-42 154
MsG0480018083.01.T01 MTR_2g100450 51.724 232 63 5 4 189 261 489 6.76e-60 202
MsG0480018083.01.T01 MTR_2g100450 85.714 84 12 0 186 269 563 646 4.34e-42 153
MsG0480018083.01.T01 MTR_2g100450 51.724 232 63 5 4 189 261 489 1.67e-59 202
MsG0480018083.01.T01 MTR_2g100450 85.714 84 12 0 186 269 563 646 4.44e-42 154
MsG0480018083.01.T01 MTR_8g014930 31.594 345 156 10 4 269 260 603 7.78e-34 130
MsG0480018083.01.T01 MTR_8g014930 31.594 345 156 10 4 269 260 603 7.93e-34 129
MsG0480018083.01.T01 MTR_8g015340 44.961 129 67 3 142 269 544 669 1.65e-24 103
MsG0480018083.01.T01 MTR_8g015340 40.860 93 51 3 21 110 291 382 5.35e-11 63.2
MsG0480018083.01.T01 MTR_8g014730 55.556 81 36 0 189 269 557 637 2.38e-23 99.4
MsG0480018083.01.T01 MTR_8g014730 39.823 113 54 2 4 110 263 367 2.43e-14 73.2
MsG0480018083.01.T01 MTR_8g015040 53.191 94 39 1 181 269 596 689 4.54e-23 99.0
MsG0480018083.01.T01 MTR_2g100550 61.905 84 18 2 186 269 333 402 4.84e-23 98.6
MsG0480018083.01.T01 MTR_8g461120 56.098 82 36 0 188 269 570 651 5.91e-23 98.6
MsG0480018083.01.T01 MTR_8g461120 33.333 108 71 1 4 110 278 385 1.97e-11 64.3
MsG0480018083.01.T01 MTR_8g014930 55.556 81 36 0 189 269 562 642 6.41e-23 98.2
MsG0480018083.01.T01 MTR_8g014930 34.392 189 108 7 4 186 260 438 2.14e-15 76.3
MsG0480018083.01.T01 MTR_8g461120 56.098 82 36 0 188 269 570 651 7.08e-23 98.2
MsG0480018083.01.T01 MTR_8g461120 33.333 108 71 1 4 110 278 385 1.72e-11 64.7
MsG0480018083.01.T01 MTR_8g014860 52.439 82 39 0 188 269 81 162 7.91e-23 93.6
MsG0480018083.01.T01 MTR_8g461120 56.098 82 36 0 188 269 546 627 8.49e-23 98.2
MsG0480018083.01.T01 MTR_8g461120 33.333 108 71 1 4 110 278 385 1.85e-11 64.7
MsG0480018083.01.T01 MTR_8g014930 55.556 81 36 0 189 269 557 637 9.27e-23 97.8
MsG0480018083.01.T01 MTR_8g014930 34.392 189 108 7 4 186 255 433 1.31e-15 77.0
MsG0480018083.01.T01 MTR_8g014970 54.321 81 37 0 189 269 323 403 2.34e-22 96.7
MsG0480018083.01.T01 MTR_8g015150 53.659 82 38 0 188 269 551 632 3.94e-22 95.9
MsG0480018083.01.T01 MTR_8g015150 34.375 192 103 9 4 186 255 432 8.53e-15 74.3
MsG0480018083.01.T01 MTR_8g015150 53.659 82 38 0 188 269 551 632 4.04e-22 95.9
MsG0480018083.01.T01 MTR_8g015150 34.375 192 103 9 4 186 255 432 9.55e-15 74.3
MsG0480018083.01.T01 MTR_8g014860 52.439 82 39 0 188 269 81 162 4.33e-22 93.2
MsG0480018083.01.T01 MTR_8g015100 53.659 82 38 0 188 269 254 335 4.92e-22 95.5
MsG0480018083.01.T01 MTR_8g015150 53.659 82 38 0 188 269 551 632 4.99e-22 95.9
MsG0480018083.01.T01 MTR_8g015150 34.375 192 103 9 4 186 255 432 6.68e-15 74.7
MsG0480018083.01.T01 MTR_8g015150 53.659 82 38 0 188 269 306 387 5.62e-22 95.5
MsG0480018083.01.T01 MTR_8g015150 34.375 192 103 9 4 186 10 187 4.44e-15 75.1
MsG0480018083.01.T01 MTR_8g015100 53.659 82 38 0 188 269 471 552 6.50e-22 95.5
MsG0480018083.01.T01 MTR_8g015190 52.174 92 42 1 178 269 585 674 6.84e-22 95.5
MsG0480018083.01.T01 MTR_8g015190 40.816 98 48 4 21 110 298 393 7.21e-13 68.9
MsG0480018083.01.T01 MTR_6g090615 54.118 85 39 0 185 269 559 643 6.89e-22 95.5
MsG0480018083.01.T01 MTR_8g015190 52.174 92 42 1 178 269 575 664 7.04e-22 95.5
MsG0480018083.01.T01 MTR_8g015190 40.816 98 48 4 21 110 288 383 7.44e-13 68.9
MsG0480018083.01.T01 MTR_8g014790 54.878 82 37 0 188 269 559 640 8.11e-22 95.1
MsG0480018083.01.T01 MTR_8g014790 33.333 189 110 7 4 186 260 438 1.69e-13 70.5
MsG0480018083.01.T01 MTR_8g014700 54.321 81 37 0 189 269 563 643 2.08e-21 94.0
MsG0480018083.01.T01 MTR_8g014700 32.292 192 108 7 4 186 263 441 2.75e-12 67.0
MsG0480018083.01.T01 MTR_8g015010 52.439 82 39 0 188 269 606 687 2.18e-21 94.0
MsG0480018083.01.T01 MTR_8g014700 53.659 82 38 0 188 269 562 643 2.96e-21 93.6
MsG0480018083.01.T01 MTR_8g014700 32.292 192 108 7 4 186 263 441 1.53e-12 67.8
MsG0480018083.01.T01 MTR_8g014700 53.659 82 38 0 188 269 562 643 3.16e-21 93.6
MsG0480018083.01.T01 MTR_8g014700 32.292 192 108 7 4 186 263 441 1.75e-12 67.8
MsG0480018083.01.T01 MTR_8g014760 52.439 82 39 0 188 269 558 639 3.31e-21 93.2
MsG0480018083.01.T01 MTR_8g014760 31.217 189 116 6 2 186 259 437 4.10e-12 66.2
MsG0480018083.01.T01 MTR_8g014760 52.439 82 39 0 188 269 554 635 4.40e-21 93.2
MsG0480018083.01.T01 MTR_8g014760 31.694 183 111 6 8 186 261 433 3.11e-12 67.0
MsG0480018083.01.T01 MTR_8g015200 47.368 95 46 1 179 269 520 614 5.53e-21 92.8
MsG0480018083.01.T01 MTR_8g015200 30.556 180 108 7 4 177 242 410 1.65e-11 64.7
MsG0480018083.01.T01 MTR_8g028110 51.220 82 40 0 188 269 563 644 8.31e-21 92.0
MsG0480018083.01.T01 MTR_8g028110 37.273 110 65 3 4 110 267 375 7.49e-13 68.6
MsG0480018083.01.T01 MTR_8g014690 50.000 82 41 0 188 269 567 648 7.06e-20 89.4
MsG0480018083.01.T01 MTR_8g014690 41.818 110 60 3 4 110 265 373 1.74e-14 73.6
MsG0480018083.01.T01 MTR_8g014690 50.000 82 41 0 188 269 560 641 9.30e-20 89.0
MsG0480018083.01.T01 MTR_8g014690 41.818 110 60 3 4 110 258 366 1.54e-14 73.6
MsG0480018083.01.T01 MTR_5g058090 43.210 81 46 0 189 269 577 657 9.41e-14 71.2
MsG0480018083.01.T01 MTR_6g090605 36.842 114 67 3 2 112 271 382 3.24e-13 69.3
MsG0480018083.01.T01 MTR_7g015240 41.975 81 45 1 191 269 514 594 6.28e-13 68.9
MsG0480018083.01.T01 MTR_8g064690 43.243 74 40 1 189 260 301 374 7.73e-13 68.6
MsG0480018083.01.T01 MTR_6g016040 37.778 90 56 0 180 269 99 188 1.69e-12 67.4
MsG0480018083.01.T01 MTR_7g100630 40.506 79 47 0 191 269 598 676 3.41e-12 66.6
MsG0480018083.01.T01 MTR_7g061220 40.506 79 47 0 191 269 92 170 4.28e-12 66.2
MsG0480018083.01.T01 MTR_8g014760 31.217 189 116 6 2 186 259 437 4.41e-12 66.2
MsG0480018083.01.T01 MTR_8g077850 38.554 83 49 1 189 269 327 409 4.65e-12 66.2
MsG0480018083.01.T01 MTR_8g014760 31.217 189 116 6 2 186 259 437 5.55e-12 65.9
MsG0480018083.01.T01 MTR_6g088610 39.759 83 48 1 189 269 285 367 6.11e-12 65.9
MsG0480018083.01.T01 MTR_1g066950 40.244 82 49 0 188 269 589 670 6.56e-12 65.9
MsG0480018083.01.T01 MTR_8g037700 34.286 105 54 2 180 269 499 603 7.38e-12 65.9
MsG0480018083.01.T01 MTR_6g088510 38.554 83 49 1 188 268 87 169 7.43e-12 65.5
MsG0480018083.01.T01 MTR_7g058810 40.476 84 47 2 189 269 83 166 8.24e-12 65.1
MsG0480018083.01.T01 MTR_7g015390 39.506 81 47 1 191 269 525 605 8.74e-12 65.5
MsG0480018083.01.T01 MTR_2g080220 36.145 83 51 1 189 269 492 574 1.32e-11 65.1
MsG0480018083.01.T01 MTR_7g015670 39.506 81 47 1 191 269 528 608 1.35e-11 65.1
MsG0480018083.01.T01 MTR_7g015280 34.058 138 81 4 135 269 457 587 1.37e-11 65.1
MsG0480018083.01.T01 MTR_3g086120 41.791 67 39 0 196 262 607 673 2.08e-11 64.3
MsG0480018083.01.T01 MTR_7g015230 39.506 81 47 1 191 269 527 607 2.24e-11 64.3
MsG0480018083.01.T01 MTR_3g086120 41.791 67 39 0 196 262 607 673 2.26e-11 64.3
MsG0480018083.01.T01 MTR_7g015250 40.741 81 46 1 191 269 511 591 2.56e-11 63.9
MsG0480018083.01.T01 MTR_7g015310 35.577 104 56 2 177 269 494 597 2.94e-11 63.9
MsG0480018083.01.T01 MTR_7g015510 40.741 81 46 1 191 269 525 605 2.98e-11 63.9
MsG0480018083.01.T01 MTR_7g015550 40.741 81 46 1 191 269 525 605 3.39e-11 63.9
MsG0480018083.01.T01 MTR_1g100787 38.272 81 48 1 191 269 985 1065 3.67e-11 63.5
MsG0480018083.01.T01 MTR_5g019940 38.554 83 49 1 189 269 246 328 4.73e-11 63.2
MsG0480018083.01.T01 MTR_4g109010 38.272 81 48 1 191 269 529 609 4.89e-11 63.2
MsG0480018083.01.T01 MTR_1g080740 36.585 82 50 1 190 269 513 594 5.15e-11 63.2
MsG0480018083.01.T01 MTR_5g088400 36.559 93 47 2 189 269 60 152 5.51e-11 62.0
MsG0480018083.01.T01 MTR_5g075650 41.463 82 45 2 188 266 605 686 5.76e-11 63.2
MsG0480018083.01.T01 MTR_3g062570 36.145 83 51 1 189 269 495 577 5.94e-11 63.2
MsG0480018083.01.T01 MTR_3g062570 36.145 83 51 1 189 269 359 441 7.56e-11 62.8
MsG0480018083.01.T01 MTR_3g062570 36.145 83 51 1 189 269 610 692 8.31e-11 62.8
MsG0480018083.01.T01 MTR_5g030920 38.356 73 45 0 190 262 589 661 8.44e-11 62.4
MsG0480018083.01.T01 MTR_3g116450 41.333 75 42 1 188 260 277 351 8.96e-11 62.4
MsG0480018083.01.T01 MTR_5g030920 38.356 73 45 0 190 262 566 638 9.63e-11 62.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480018083.01.T01 AT3G46420 30.357 336 151 9 16 269 269 603 1.47e-32 126
MsG0480018083.01.T01 AT1G51890 64.198 81 28 1 189 269 498 577 3.14e-28 114
MsG0480018083.01.T01 AT1G51890 33.962 159 97 4 19 172 203 358 1.38e-14 73.9
MsG0480018083.01.T01 AT1G51890 64.198 81 28 1 189 269 290 369 3.41e-28 113
MsG0480018083.01.T01 AT1G51890 33.333 153 94 4 25 172 1 150 1.11e-12 68.2
MsG0480018083.01.T01 AT1G51890 64.198 81 28 1 189 269 562 641 3.87e-28 113
MsG0480018083.01.T01 AT1G51890 33.962 159 97 4 19 172 267 422 1.30e-14 73.9
MsG0480018083.01.T01 AT1G51890 64.198 81 28 1 189 269 562 641 4.04e-28 113
MsG0480018083.01.T01 AT1G51890 33.962 159 97 4 19 172 267 422 1.43e-14 73.9
MsG0480018083.01.T01 AT1G51890 64.198 81 28 1 189 269 562 641 4.07e-28 113
MsG0480018083.01.T01 AT1G51890 33.962 159 97 4 19 172 267 422 1.35e-14 73.9
MsG0480018083.01.T01 AT1G51860 47.200 125 54 3 156 269 388 511 6.82e-28 112
MsG0480018083.01.T01 AT1G51860 34.545 165 92 5 17 172 126 283 6.07e-16 77.8
MsG0480018083.01.T01 AT1G51860 47.200 125 54 3 156 269 532 655 9.03e-28 112
MsG0480018083.01.T01 AT1G51860 34.545 165 92 5 17 172 270 427 6.82e-16 77.8
MsG0480018083.01.T01 AT1G51880 51.754 114 47 4 156 269 532 637 6.26e-27 110
MsG0480018083.01.T01 AT1G51880 35.393 178 99 6 4 172 256 426 1.31e-14 73.9
MsG0480018083.01.T01 AT1G51880 51.754 114 47 4 156 269 558 663 6.38e-27 110
MsG0480018083.01.T01 AT1G51880 35.393 178 99 6 4 172 274 444 1.33e-14 73.9
MsG0480018083.01.T01 AT1G51880 51.754 114 47 4 156 269 550 655 6.80e-27 110
MsG0480018083.01.T01 AT1G51880 35.393 178 99 6 4 172 274 444 1.21e-14 73.9
MsG0480018083.01.T01 AT1G51870 60.494 81 31 1 189 269 575 654 8.06e-26 107
MsG0480018083.01.T01 AT1G51870 34.615 156 94 3 22 172 275 427 1.81e-14 73.6
MsG0480018083.01.T01 AT1G51870 60.494 81 31 1 189 269 523 602 9.40e-26 106
MsG0480018083.01.T01 AT1G51870 34.615 156 94 3 22 172 275 427 1.38e-14 73.9
MsG0480018083.01.T01 AT3G21340 49.000 100 47 1 174 269 565 664 3.00e-25 105
MsG0480018083.01.T01 AT3G21340 32.143 168 105 6 10 172 267 430 3.43e-12 66.6
MsG0480018083.01.T01 AT3G21340 58.025 81 34 0 189 269 584 664 4.52e-25 104
MsG0480018083.01.T01 AT3G21340 32.143 168 105 6 10 172 267 430 2.97e-12 67.0
MsG0480018083.01.T01 AT2G04300 56.790 81 35 0 189 269 533 613 1.10e-24 103
MsG0480018083.01.T01 AT2G04300 56.790 81 35 0 189 269 574 654 1.11e-24 103
MsG0480018083.01.T01 AT2G04300 29.949 197 119 9 2 188 262 449 8.27e-12 65.5
MsG0480018083.01.T01 AT1G51830 55.556 81 36 0 189 269 385 465 2.27e-24 102
MsG0480018083.01.T01 AT1G51830 55.556 81 36 0 189 269 378 458 2.68e-24 102
MsG0480018083.01.T01 AT1G51805 40.000 135 69 2 146 269 516 649 6.48e-24 101
MsG0480018083.01.T01 AT1G51805 42.000 100 41 3 22 111 268 360 2.61e-13 70.1
MsG0480018083.01.T01 AT1G51805 40.000 135 69 2 146 269 492 625 6.87e-24 101
MsG0480018083.01.T01 AT1G51805 42.000 100 41 3 22 111 244 336 2.36e-13 70.1
MsG0480018083.01.T01 AT1G51820 53.659 82 38 0 188 269 307 388 9.28e-24 100
MsG0480018083.01.T01 AT1G51820 53.659 82 38 0 188 269 569 650 1.12e-23 100
MsG0480018083.01.T01 AT1G51820 29.204 226 109 8 4 179 249 473 6.85e-13 68.9
MsG0480018083.01.T01 AT2G19210 33.040 227 106 6 5 185 264 490 1.17e-23 100
MsG0480018083.01.T01 AT2G19210 56.790 81 34 1 189 269 568 647 3.46e-22 96.3
MsG0480018083.01.T01 AT1G51910 47.107 121 52 5 157 269 529 645 1.58e-23 100
MsG0480018083.01.T01 AT1G51910 35.849 159 88 5 22 172 275 427 1.21e-11 65.1
MsG0480018083.01.T01 AT1G51850 54.321 81 37 0 189 269 550 630 2.57e-23 99.8
MsG0480018083.01.T01 AT1G51850 32.759 174 108 6 4 172 229 398 3.23e-12 67.0
MsG0480018083.01.T01 AT1G51850 54.321 81 37 0 189 269 570 650 2.85e-23 99.4
MsG0480018083.01.T01 AT1G51850 32.759 174 108 6 4 172 249 418 3.40e-12 66.6
MsG0480018083.01.T01 AT1G51810 55.556 81 36 0 189 269 442 522 6.95e-23 98.2
MsG0480018083.01.T01 AT1G51810 39.091 110 62 3 1 106 121 229 1.05e-14 74.3
MsG0480018083.01.T01 AT4G29990 58.025 81 33 1 189 269 566 645 1.06e-22 97.8
MsG0480018083.01.T01 AT4G29990 28.926 242 110 8 1 185 250 486 4.42e-17 81.3
MsG0480018083.01.T01 AT4G29990 58.025 81 33 1 189 269 566 645 1.19e-22 97.8
MsG0480018083.01.T01 AT4G29990 28.926 242 110 8 1 185 250 486 3.42e-17 81.6
MsG0480018083.01.T01 AT2G28970 40.164 122 65 2 156 269 395 516 5.93e-22 95.5
MsG0480018083.01.T01 AT2G28970 32.663 199 111 7 2 184 118 309 5.79e-15 75.1
MsG0480018083.01.T01 AT2G28970 40.164 122 65 2 156 269 430 551 6.02e-22 95.5
MsG0480018083.01.T01 AT2G28970 32.663 199 111 7 2 184 153 344 7.21e-15 74.7
MsG0480018083.01.T01 AT5G16900 50.617 81 40 0 189 269 379 459 8.30e-21 92.0
MsG0480018083.01.T01 AT5G16900 47.191 89 47 0 181 269 557 645 8.35e-21 92.4
MsG0480018083.01.T01 AT5G16900 47.191 89 47 0 181 269 557 645 8.35e-21 92.4
MsG0480018083.01.T01 AT4G20450 48.936 94 44 1 180 269 570 663 2.18e-20 90.9
MsG0480018083.01.T01 AT4G20450 48.936 94 44 1 180 269 570 663 2.34e-20 90.9
MsG0480018083.01.T01 AT1G07560 51.852 81 39 0 189 269 562 642 2.67e-20 90.9
MsG0480018083.01.T01 AT1G07560 33.333 156 95 5 22 172 277 428 4.70e-11 63.5
MsG0480018083.01.T01 AT2G19190 54.321 81 36 1 189 269 566 645 3.14e-20 90.5
MsG0480018083.01.T01 AT2G19190 35.849 106 64 2 8 110 267 371 9.48e-11 62.4
MsG0480018083.01.T01 AT2G14510 53.086 81 37 1 189 269 563 642 3.76e-20 90.5
MsG0480018083.01.T01 AT2G14510 53.086 81 37 1 189 269 555 634 3.86e-20 90.5
MsG0480018083.01.T01 AT2G19230 53.086 81 37 1 189 269 561 640 5.38e-20 89.7
MsG0480018083.01.T01 AT2G19230 30.270 185 108 7 14 184 273 450 8.71e-15 74.7
MsG0480018083.01.T01 AT2G28990 50.617 81 40 0 189 269 569 649 5.71e-20 89.7
MsG0480018083.01.T01 AT2G28990 31.319 182 106 7 2 173 250 422 7.04e-13 68.9
MsG0480018083.01.T01 AT2G28990 50.617 81 40 0 189 269 569 649 5.71e-20 89.7
MsG0480018083.01.T01 AT2G28990 31.319 182 106 7 2 173 250 422 7.04e-13 68.9
MsG0480018083.01.T01 AT2G14440 53.086 81 37 1 189 269 556 635 6.54e-20 89.7
MsG0480018083.01.T01 AT2G14440 27.273 176 112 5 5 172 261 428 7.87e-11 62.8
MsG0480018083.01.T01 AT2G19230 53.086 81 37 1 189 269 562 641 6.76e-20 89.7
MsG0480018083.01.T01 AT2G19230 30.270 185 108 7 14 184 273 450 7.78e-15 74.7
MsG0480018083.01.T01 AT3G46400 49.383 81 41 0 189 269 568 648 1.67e-19 88.6
MsG0480018083.01.T01 AT3G46400 35.429 175 104 7 4 173 258 428 9.12e-14 71.6
MsG0480018083.01.T01 AT2G28960 49.383 81 41 0 189 269 433 513 2.34e-19 87.8
MsG0480018083.01.T01 AT5G59670 49.383 81 41 0 189 269 556 636 2.50e-19 87.8
MsG0480018083.01.T01 AT5G59670 34.783 161 90 7 21 172 272 426 1.02e-13 71.2
MsG0480018083.01.T01 AT5G59670 49.383 81 41 0 189 269 556 636 2.50e-19 87.8
MsG0480018083.01.T01 AT5G59670 34.783 161 90 7 21 172 272 426 1.02e-13 71.2
MsG0480018083.01.T01 AT2G28960 49.383 81 41 0 189 269 565 645 3.00e-19 87.8
MsG0480018083.01.T01 AT2G29000 49.383 81 41 0 189 269 557 637 3.57e-19 87.4
MsG0480018083.01.T01 AT1G51800 37.589 141 71 4 143 269 520 657 3.74e-19 87.4
MsG0480018083.01.T01 AT1G51800 32.143 168 83 8 21 172 272 424 3.33e-11 63.9
MsG0480018083.01.T01 AT3G46370 49.383 81 41 0 189 269 479 559 4.40e-19 87.0
MsG0480018083.01.T01 AT3G46370 35.838 173 96 7 5 172 176 338 3.62e-18 84.3
MsG0480018083.01.T01 AT3G46370 49.383 81 41 0 189 269 479 559 4.40e-19 87.0
MsG0480018083.01.T01 AT3G46370 35.838 173 96 7 5 172 176 338 3.62e-18 84.3
MsG0480018083.01.T01 AT1G49100 40.909 110 61 1 160 269 548 653 7.70e-19 86.7
MsG0480018083.01.T01 AT1G49100 30.899 178 98 7 9 172 263 429 1.76e-12 67.8
MsG0480018083.01.T01 AT3G46340 48.193 83 42 1 188 269 576 658 3.34e-18 84.7
MsG0480018083.01.T01 AT3G46340 35.526 152 81 7 3 143 257 402 9.93e-14 71.2
MsG0480018083.01.T01 AT1G05700 35.897 156 90 6 21 172 276 425 3.67e-18 84.3
MsG0480018083.01.T01 AT1G05700 39.450 109 64 2 161 269 535 641 1.56e-17 82.8
MsG0480018083.01.T01 AT1G05700 35.897 156 90 6 21 172 276 425 4.95e-18 84.0
MsG0480018083.01.T01 AT1G05700 44.086 93 50 2 177 269 582 672 3.63e-17 81.6
MsG0480018083.01.T01 AT3G46330 45.679 81 44 0 189 269 558 638 9.73e-18 83.2
MsG0480018083.01.T01 AT3G46330 38.710 93 53 1 22 110 276 368 2.83e-13 70.1
MsG0480018083.01.T01 AT3G46330 45.679 81 44 0 189 269 534 614 1.02e-17 83.2
MsG0480018083.01.T01 AT3G46330 29.843 191 104 5 22 184 276 464 2.64e-15 75.9
MsG0480018083.01.T01 AT1G07550 46.914 81 42 1 189 269 552 631 5.82e-17 80.9
MsG0480018083.01.T01 AT1G07550 29.775 178 110 6 4 173 257 427 8.44e-12 65.5
MsG0480018083.01.T01 AT4G29180 45.745 94 38 1 189 269 557 650 6.14e-16 77.8
MsG0480018083.01.T01 AT4G29180 45.745 94 38 1 189 269 556 649 6.86e-16 77.8
MsG0480018083.01.T01 AT4G29180 45.745 94 38 1 189 269 559 652 6.87e-16 77.8
MsG0480018083.01.T01 AT5G59680 51.852 81 39 0 189 269 572 652 8.53e-16 77.4
MsG0480018083.01.T01 AT5G59680 34.969 163 85 7 21 172 274 426 1.92e-15 76.6
MsG0480018083.01.T01 AT4G29450 45.161 93 39 2 189 269 558 650 1.28e-15 77.0
MsG0480018083.01.T01 AT5G59650 50.617 81 40 0 189 269 579 659 3.13e-15 75.9
MsG0480018083.01.T01 AT5G59650 50.617 81 40 0 189 269 571 651 3.50e-15 75.9
MsG0480018083.01.T01 AT5G59650 39.286 112 61 3 4 110 257 366 8.32e-13 68.6
MsG0480018083.01.T01 AT5G59616 37.879 132 67 5 21 143 12 137 3.88e-15 71.2
MsG0480018083.01.T01 AT5G16900 47.143 70 37 0 181 250 557 626 1.74e-14 73.6
MsG0480018083.01.T01 AT1G51620 48.148 81 41 1 189 269 39 118 2.24e-14 72.4
MsG0480018083.01.T01 AT1G51790 44.444 81 44 1 189 269 569 648 1.14e-13 71.2
MsG0480018083.01.T01 AT1G51790 44.444 81 44 1 189 269 569 648 1.14e-13 71.2
MsG0480018083.01.T01 AT1G51790 44.444 81 44 1 189 269 621 700 1.16e-13 71.2
MsG0480018083.01.T01 AT5G28680 43.210 81 44 1 191 269 513 593 3.51e-13 69.7
MsG0480018083.01.T01 AT5G28680 43.210 81 44 1 191 269 513 593 3.51e-13 69.7
MsG0480018083.01.T01 AT3G04690 43.210 81 44 1 191 269 509 589 5.04e-13 69.3
MsG0480018083.01.T01 AT1G70460 37.255 102 60 2 161 260 317 416 1.56e-12 67.8
MsG0480018083.01.T01 AT4G39110 39.506 81 47 1 191 269 518 598 2.39e-12 67.4
MsG0480018083.01.T01 AT5G59660 45.946 74 36 1 189 258 480 553 2.94e-12 67.0
MsG0480018083.01.T01 AT5G59660 45.946 74 36 1 189 258 505 578 2.96e-12 67.0
MsG0480018083.01.T01 AT5G59660 45.946 74 36 1 189 258 502 575 3.01e-12 67.0
MsG0480018083.01.T01 AT1G10620 44.595 74 39 1 189 260 360 433 4.19e-12 66.6
MsG0480018083.01.T01 AT1G49270 37.349 83 50 1 189 269 326 408 4.23e-12 66.2
MsG0480018083.01.T01 AT5G54590 38.043 92 57 0 178 269 94 185 5.29e-12 64.7
MsG0480018083.01.T01 AT4G32710 41.667 84 47 1 188 269 378 461 6.76e-12 65.9
MsG0480018083.01.T01 AT5G61350 39.759 83 48 1 189 269 515 597 8.08e-12 65.5
MsG0480018083.01.T01 AT2G21480 37.037 81 49 1 191 269 517 597 1.14e-11 65.1
MsG0480018083.01.T01 AT1G23540 40.000 75 43 1 188 260 360 434 1.45e-11 64.7
MsG0480018083.01.T01 AT3G24550 39.759 83 48 1 189 269 270 352 1.49e-11 64.7
MsG0480018083.01.T01 AT4G02010 36.190 105 59 3 157 259 344 442 1.73e-11 64.7
MsG0480018083.01.T01 AT1G23540 40.000 75 43 1 188 260 360 434 1.80e-11 64.3
MsG0480018083.01.T01 AT1G79620 44.000 75 40 1 188 260 627 701 1.83e-11 64.7
MsG0480018083.01.T01 AT1G79620 44.000 75 40 1 188 260 627 701 2.01e-11 64.3
MsG0480018083.01.T01 AT1G79620 44.000 75 40 1 188 260 627 701 2.22e-11 64.3
MsG0480018083.01.T01 AT1G79620 44.000 75 40 1 188 260 653 727 2.28e-11 64.3
MsG0480018083.01.T01 AT5G54590 37.778 90 56 0 180 269 96 185 2.35e-11 63.9
MsG0480018083.01.T01 AT5G54590 37.778 90 56 0 180 269 96 185 2.35e-11 63.9
MsG0480018083.01.T01 AT5G54590 37.778 90 56 0 180 269 96 185 2.35e-11 63.9
MsG0480018083.01.T01 AT2G37050 38.961 77 46 1 191 266 597 673 2.66e-11 63.9
MsG0480018083.01.T01 AT2G37050 38.961 77 46 1 191 266 598 674 2.66e-11 63.9
MsG0480018083.01.T01 AT2G37050 38.961 77 46 1 191 266 597 673 3.76e-11 63.5
MsG0480018083.01.T01 AT2G37050 38.961 77 46 1 191 266 598 674 3.80e-11 63.5
MsG0480018083.01.T01 AT1G70450 41.892 74 41 1 189 260 39 112 4.05e-11 63.2
MsG0480018083.01.T01 AT3G18810 36.145 83 51 1 189 269 327 409 6.05e-11 62.8
MsG0480018083.01.T01 AT5G54380 33.735 83 53 1 189 269 500 582 6.70e-11 62.8

Find 47 sgRNAs with CRISPR-Local

Find 176 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTGATTTGCATCGAGCTTC+TGG 0.227717 4:-20387 None:intergenic
AAATACTTGACAGGTCTTAT+AGG 0.242464 4:+23387 MsG0480018083.01.T01:CDS
TTGGAAGGAAATCAGCTATC+AGG 0.375546 4:+22440 MsG0480018083.01.T01:CDS
AATACTTGACAGGTCTTATA+GGG 0.376188 4:+23388 MsG0480018083.01.T01:CDS
CAATGTCGTCGAGACATATA+TGG 0.381553 4:+20567 MsG0480018083.01.T01:CDS
TTCTTACAATCTTATTCGTA+TGG 0.400276 4:+20722 MsG0480018083.01.T01:CDS
CATGCACTTCATTATTTACA+TGG 0.404477 4:+20695 MsG0480018083.01.T01:CDS
GAACGCACAAGGAGTTGTAT+TGG 0.423215 4:-22470 None:intergenic
GAAGATACAAAGGAATGAAT+AGG 0.428109 4:-20456 None:intergenic
TTTGAAAAGGTTGTGGAGAA+AGG 0.428970 4:+23116 MsG0480018083.01.T01:CDS
CAGAAACTTTGAAAAGGTTG+TGG 0.430911 4:+23109 MsG0480018083.01.T01:CDS
CTAAGCTGCCAGTGACAACT+TGG 0.444235 4:+20300 MsG0480018083.01.T01:intron
GTGAAACGAAGTTGGAACTT+TGG 0.448803 4:+20506 MsG0480018083.01.T01:CDS
GTTGTGGAGAAAGGAGCATC+TGG 0.469808 4:+23125 MsG0480018083.01.T01:CDS
CTTATAGGGTATTGTGATGA+TGG 0.472954 4:+23402 MsG0480018083.01.T01:CDS
AACCTGGAAATGACTACAAA+AGG 0.478884 4:-20760 None:intergenic
GGCATTATACTTGGGAAGGA+AGG 0.485026 4:-20329 None:intergenic
ATATGTGGAGGCATTATACT+TGG 0.487647 4:-20338 None:intergenic
CTGGAACAGTCTACCATGGC+TGG 0.488403 4:+23144 MsG0480018083.01.T01:CDS
GGAAAATTCCAAGTTGTCAC+TGG 0.491907 4:-20308 None:intergenic
AGTTATTAGTGAAACGAAGT+TGG 0.493413 4:+20498 MsG0480018083.01.T01:CDS
CATTACCAGAAACTTTGAAA+AGG 0.512003 4:+23103 MsG0480018083.01.T01:CDS
TCTTACAATCTTATTCGTAT+GGG 0.514262 4:+20723 MsG0480018083.01.T01:CDS
ACTCTAGATTAGAGCCATGT+TGG 0.527280 4:-23427 None:intergenic
GTTCATCATAAATACTTGAC+AGG 0.530148 4:+23378 MsG0480018083.01.T01:CDS
TAATAACTGATATATAATAC+AGG 0.545081 4:-20483 None:intergenic
GTCTCGACGACATTGAATAG+TGG 0.551109 4:-20559 None:intergenic
ATTTACTGAAGAAACTTGGA+AGG 0.554011 4:+22425 MsG0480018083.01.T01:intron
CAGATATCCTTGAGTTGATG+AGG 0.561128 4:-23207 None:intergenic
GTGCATGTACACATAATATG+TGG 0.566614 4:-20353 None:intergenic
TACTATTCTTTGAACGCACA+AGG 0.569542 4:-22481 None:intergenic
CTATCTTCCTCATCAACTCA+AGG 0.579253 4:+23200 MsG0480018083.01.T01:CDS
TGGAGGCATTATACTTGGGA+AGG 0.584867 4:-20333 None:intergenic
CATGTAAATAATGAAGTGCA+TGG 0.596999 4:-20694 None:intergenic
TACAGGTTCTGAAGATACAA+AGG 0.605212 4:-20466 None:intergenic
CGTCGAGACATATATGGCAA+AGG 0.622385 4:+20573 MsG0480018083.01.T01:CDS
TATGTGGAGGCATTATACTT+GGG 0.630511 4:-20337 None:intergenic
AGCATTAACCATGACATGAG+GGG 0.634567 4:+20162 None:intergenic
TATCATGATCAATCCAGCCA+TGG 0.635701 4:-23157 None:intergenic
TCAGAAACATATCAAACCGA+TGG 0.637155 4:+20607 MsG0480018083.01.T01:CDS
TCGACGACATTGAATAGTGG+TGG 0.637303 4:-20556 None:intergenic
ATATCTGCAATTTCAAGCAG+AGG 0.641697 4:+23223 MsG0480018083.01.T01:CDS
CATGTACACATAATATGTGG+AGG 0.657421 4:-20350 None:intergenic
AACTAAATAGTACATACCAT+CGG 0.663973 4:-20623 None:intergenic
GCATCTGGAACAGTCTACCA+TGG 0.666857 4:+23140 MsG0480018083.01.T01:CDS
CTGGATTGATCATGATACTG+AGG 0.708911 4:+23163 MsG0480018083.01.T01:CDS
TTGTGATGATGGCACCAACA+TGG 0.719558 4:+23413 MsG0480018083.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTTATATTTTTATTAAA+TGG + Chr4:20896-20915 MsG0480018083.01.T01:intron 0.0%
!!! TTTTTTATTTTTATTTTAAT+TGG - Chr4:21639-21658 None:intergenic 0.0%
!! ATAAAAATAGATGATTTAAT+TGG + Chr4:22873-22892 MsG0480018083.01.T01:intron 10.0%
!! TAAAAATAGATGATTTAATT+GGG + Chr4:22874-22893 MsG0480018083.01.T01:intron 10.0%
!!! AAAATAAAAAAACAGTTTTT+TGG + Chr4:21231-21250 MsG0480018083.01.T01:intron 10.0%
!!! TAAATATATTTCTGATTTTT+TGG + Chr4:21558-21577 MsG0480018083.01.T01:intron 10.0%
!! ATAATTTGACAATTTATGAT+CGG + Chr4:23002-23021 MsG0480018083.01.T01:intron 15.0%
!! ATTTATATATCAAGAATGTA+TGG + Chr4:22593-22612 MsG0480018083.01.T01:intron 15.0%
!! TAATAACTGATATATAATAC+AGG - Chr4:20486-20505 None:intergenic 15.0%
!! TCTAAAAAAAAAAATTTACG+AGG - Chr4:20819-20838 None:intergenic 15.0%
!! TTTAAAAATAAAATCTGATG+TGG - Chr4:20942-20961 None:intergenic 15.0%
!!! ATTTTTCTACTAAAAAAATC+TGG - Chr4:21210-21229 None:intergenic 15.0%
!!! TACTTCGTTTTTTTTAAATT+AGG - Chr4:21340-21359 None:intergenic 15.0%
!!! TCTATTTTTATTCTATTGTT+CGG - Chr4:22864-22883 None:intergenic 15.0%
!! AACTTTAAATAGAACATACT+TGG - Chr4:22516-22535 None:intergenic 20.0%
!! TCAATTAATTATATTGCTTG+AGG + Chr4:22346-22365 MsG0480018083.01.T01:intron 20.0%
!!! AGTTCAACATTTTTGTAAAT+GGG + Chr4:20416-20435 MsG0480018083.01.T01:CDS 20.0%
!!! GGAAAAAAAATAATTTTACG+AGG + Chr4:21725-21744 MsG0480018083.01.T01:intron 20.0%
!!! TTTTATTTACTGAAGAAACT+TGG + Chr4:22421-22440 MsG0480018083.01.T01:intron 20.0%
! AACTAAATAGTACATACCAT+CGG - Chr4:20626-20645 None:intergenic 25.0%
! ACAATTTATGATCGGTAAAT+TGG + Chr4:23010-23029 MsG0480018083.01.T01:intron 25.0%
! GAAATAACCTATATTACAGA+GGG + Chr4:21786-21805 MsG0480018083.01.T01:intron 25.0%
! GATCACAAAATAGAATGTTA+AGG + Chr4:22206-22225 MsG0480018083.01.T01:intron 25.0%
! GGTAAGACATTTAAAAATTC+TGG - Chr4:21319-21338 None:intergenic 25.0%
! TAAATGTGAAGTCAACTTAT+GGG + Chr4:21888-21907 MsG0480018083.01.T01:intron 25.0%
! TAGCATCAACTATTATCATA+AGG - Chr4:21865-21884 None:intergenic 25.0%
! TCATATACTTGTAAGTTATG+TGG + Chr4:22004-22023 MsG0480018083.01.T01:intron 25.0%
! TCTTACAATCTTATTCGTAT+GGG + Chr4:20723-20742 MsG0480018083.01.T01:CDS 25.0%
! TTCTTACAATCTTATTCGTA+TGG + Chr4:20722-20741 MsG0480018083.01.T01:CDS 25.0%
!! GAGTTCAACATTTTTGTAAA+TGG + Chr4:20415-20434 MsG0480018083.01.T01:CDS 25.0%
!! TGTAAAATGTTTTTCACATG+TGG + Chr4:21613-21632 MsG0480018083.01.T01:intron 25.0%
!!! ATATTCTATTGACTTCAGAT+TGG - Chr4:22130-22149 None:intergenic 25.0%
!!! GTGTGATTTTTAAGATAATC+AGG + Chr4:22957-22976 MsG0480018083.01.T01:intron 25.0%
AAACCAAACCGAAAATTTCT+TGG + Chr4:21752-21771 MsG0480018083.01.T01:intron 30.0%
AACCAAACCGAAAATTTCTT+AGG - Chr4:21772-21753 None:intergenic 30.0%
AACCAAACCGAAAATTTCTT+GGG + Chr4:21753-21772 MsG0480018083.01.T01:intron 30.0%
ACCAAACCGAAAATTTCTTA+GGG - Chr4:20790-20809 None:intergenic 30.0%
ACTATACAGTGAATACGAAT+AGG - Chr4:21828-21847 None:intergenic 30.0%
ACTTACAAGTATATGATCCT+TGG - Chr4:22000-22019 None:intergenic 30.0%
AGTTATTAGTGAAACGAAGT+TGG + Chr4:20498-20517 MsG0480018083.01.T01:CDS 30.0%
ATCTTCATCTAAGTTATCCT+AGG + Chr4:22310-22329 MsG0480018083.01.T01:intron 30.0%
ATGAACTACAGCAAAAAGTT+TGG - Chr4:23364-23383 None:intergenic 30.0%
ATTTACTGAAGAAACTTGGA+AGG + Chr4:22425-22444 MsG0480018083.01.T01:intron 30.0%
CATGCACTTCATTATTTACA+TGG + Chr4:20695-20714 MsG0480018083.01.T01:CDS 30.0%
CATGTAAATAATGAAGTGCA+TGG - Chr4:20697-20716 None:intergenic 30.0%
CTAAATGTGAAGTCAACTTA+TGG + Chr4:21887-21906 MsG0480018083.01.T01:intron 30.0%
CTATACAGTGAATACGAATA+GGG - Chr4:21827-21846 None:intergenic 30.0%
GAAGATACAAAGGAATGAAT+AGG - Chr4:20459-20478 None:intergenic 30.0%
GGAAATAACCTATATTACAG+AGG + Chr4:21785-21804 MsG0480018083.01.T01:intron 30.0%
GTTCATCATAAATACTTGAC+AGG + Chr4:23378-23397 MsG0480018083.01.T01:CDS 30.0%
TAATTGGAACTATAGCTTCT+GGG + Chr4:22100-22119 MsG0480018083.01.T01:intron 30.0%
TGGAAAATTAATTTCACACG+TGG - Chr4:20922-20941 None:intergenic 30.0%
TTAATTGGAACTATAGCTTC+TGG + Chr4:22099-22118 MsG0480018083.01.T01:intron 30.0%
TTGTCGAATAACAATTTGAC+TGG + Chr4:22231-22250 MsG0480018083.01.T01:intron 30.0%
! AAATACTTGACAGGTCTTAT+AGG + Chr4:23387-23406 MsG0480018083.01.T01:CDS 30.0%
! AATACTTGACAGGTCTTATA+GGG + Chr4:23388-23407 MsG0480018083.01.T01:CDS 30.0%
! ATTACTGTATGTGCAAGTTT+TGG + Chr4:22651-22670 MsG0480018083.01.T01:intron 30.0%
! CATAAGTTGACTTCACATTT+AGG - Chr4:21889-21908 None:intergenic 30.0%
! CATTACCAGAAACTTTGAAA+AGG + Chr4:23103-23122 MsG0480018083.01.T01:CDS 30.0%
!!! GTTTTTTCCCTCTGTAATAT+AGG - Chr4:21796-21815 None:intergenic 30.0%
AAACCGAAAATTTCTTAGGG+GGG - Chr4:20787-20806 None:intergenic 35.0%
AAATTTCTTGGGAGGAAACT+TGG + Chr4:21764-21783 MsG0480018083.01.T01:intron 35.0%
AACCTGGAAATGACTACAAA+AGG - Chr4:20763-20782 None:intergenic 35.0%
AATTCAAATCTTTGCACCTC+AGG + Chr4:22678-22697 MsG0480018083.01.T01:intron 35.0%
ACTAACACATCACGTACAAA+AGG - Chr4:22563-22582 None:intergenic 35.0%
ACTCAGCAAAATGTAATACG+TGG + Chr4:20859-20878 MsG0480018083.01.T01:intron 35.0%
ACTCAGCAAAATGTAATACG+TGG - Chr4:20878-20859 None:intergenic 35.0%
AGTTCCTGAAGGATTATCAT+CGG - Chr4:22050-22069 None:intergenic 35.0%
ATATACTACAAGAGACACCA+AGG + Chr4:22801-22820 MsG0480018083.01.T01:intron 35.0%
ATATCTGCAATTTCAAGCAG+AGG + Chr4:23223-23242 MsG0480018083.01.T01:CDS 35.0%
CAAACCGAAAATTTCTTAGG+GGG - Chr4:20788-20807 None:intergenic 35.0%
CATGTACACATAATATGTGG+AGG - Chr4:20353-20372 None:intergenic 35.0%
CCAAACCGAAAATTTCTTAG+GGG - Chr4:20789-20808 None:intergenic 35.0%
CTTGTGAACTGAAGGAATTA+TGG + Chr4:23317-23336 MsG0480018083.01.T01:intron 35.0%
GCTTTCTATTCCATTGACAT+TGG + Chr4:22832-22851 MsG0480018083.01.T01:intron 35.0%
GTGCATGTACACATAATATG+TGG - Chr4:20356-20375 None:intergenic 35.0%
GTTCATGCAACAAGAGAAAT+GGG + Chr4:22700-22719 MsG0480018083.01.T01:intron 35.0%
GTTCCATTAGTAGTATCAGT+TGG + Chr4:22735-22754 MsG0480018083.01.T01:intron 35.0%
TACTATTCTTTGAACGCACA+AGG - Chr4:22484-22503 None:intergenic 35.0%
TATAGTTCCAATTAAACCGC+TGG - Chr4:22094-22113 None:intergenic 35.0%
TCAGAAACATATCAAACCGA+TGG + Chr4:20607-20626 MsG0480018083.01.T01:CDS 35.0%
TCTATTCCATTGACATTGGT+AGG + Chr4:22836-22855 MsG0480018083.01.T01:intron 35.0%
TTAACTTCCAGCGGTTTAAT+TGG + Chr4:22084-22103 MsG0480018083.01.T01:intron 35.0%
TTGAATAATCAAGTCAGCCT+AGG - Chr4:22330-22349 None:intergenic 35.0%
TTTGAAAAGGTTGTGGAGAA+AGG + Chr4:23116-23135 MsG0480018083.01.T01:CDS 35.0%
! AGTTTTCACTATGCAACCAT+AGG - Chr4:20275-20294 None:intergenic 35.0%
! CACAACCTTTTCAAAGTTTC+TGG - Chr4:23111-23130 None:intergenic 35.0%
! CAGAAACTTTGAAAAGGTTG+TGG + Chr4:23109-23128 MsG0480018083.01.T01:CDS 35.0%
! CGTATTACATTTTGCTGAGT+TGG + Chr4:21683-21702 MsG0480018083.01.T01:intron 35.0%
! CGTATTACATTTTGCTGAGT+TGG - Chr4:21702-21683 None:intergenic 35.0%
! GTTTCCTCCCAAGAAATTTT+CGG - Chr4:21763-21782 None:intergenic 35.0%
! TTCCTTTTGTAGTCATTTCC+AGG + Chr4:20758-20777 MsG0480018083.01.T01:CDS 35.0%
!! ATATGTGGAGGCATTATACT+TGG - Chr4:20341-20360 None:intergenic 35.0%
!! CTTATAGGGTATTGTGATGA+TGG + Chr4:23402-23421 MsG0480018083.01.T01:CDS 35.0%
!! TACAGGTTCTGAAGATACAA+AGG - Chr4:20469-20488 None:intergenic 35.0%
!! TACATTTTGCTGAGTTGGAT+GGG + Chr4:21688-21707 MsG0480018083.01.T01:intron 35.0%
!! TACATTTTGCTGAGTTGGAT+GGG - Chr4:21707-21688 None:intergenic 35.0%
!! TATGTGGAGGCATTATACTT+GGG - Chr4:20340-20359 None:intergenic 35.0%
!! TTACATTTTGCTGAGTTGGA+TGG + Chr4:21687-21706 MsG0480018083.01.T01:intron 35.0%
!! TTACATTTTGCTGAGTTGGA+TGG - Chr4:21706-21687 None:intergenic 35.0%
AAACTGCAGCTATGTTGGTA+CGG + Chr4:21969-21988 MsG0480018083.01.T01:intron 40.0%
AACCGAAAATTTCTTAGGGG+GGG - Chr4:20786-20805 None:intergenic 40.0%
AAGTAAGACACTGGAGTACA+AGG - Chr4:21937-21956 None:intergenic 40.0%
ACGATGTTCTTGTGAACTGA+AGG + Chr4:23309-23328 MsG0480018083.01.T01:intron 40.0%
ATAGAAAGCCAAACCTACCT+TGG - Chr4:22821-22840 None:intergenic 40.0%
CAAACCGAAAATTTCTTGGG+AGG + Chr4:21756-21775 MsG0480018083.01.T01:intron 40.0%
CAACAAGAGAAATGGGAGTA+AGG + Chr4:22707-22726 MsG0480018083.01.T01:intron 40.0%
CAATGTCGTCGAGACATATA+TGG + Chr4:20567-20586 MsG0480018083.01.T01:CDS 40.0%
CCACCAACTGATACTACTAA+TGG - Chr4:22741-22760 None:intergenic 40.0%
CCATTAGTAGTATCAGTTGG+TGG + Chr4:22738-22757 MsG0480018083.01.T01:intron 40.0%
CTATCTTCCTCATCAACTCA+AGG + Chr4:23200-23219 MsG0480018083.01.T01:CDS 40.0%
CTGGATTGATCATGATACTG+AGG + Chr4:23163-23182 MsG0480018083.01.T01:CDS 40.0%
CTTATGGGATCAAGAGAAAC+TGG + Chr4:21903-21922 MsG0480018083.01.T01:intron 40.0%
GGAAAATTCCAAGTTGTCAC+TGG - Chr4:20311-20330 None:intergenic 40.0%
GGTTCATGCAACAAGAGAAA+TGG + Chr4:22699-22718 MsG0480018083.01.T01:intron 40.0%
GTGAAACGAAGTTGGAACTT+TGG + Chr4:20506-20525 MsG0480018083.01.T01:CDS 40.0%
TACCAACATAGCTGCAGTTT+AGG - Chr4:21969-21988 None:intergenic 40.0%
TACTGAGCATCAATCACCTT+CGG + Chr4:20245-20264 MsG0480018083.01.T01:intron 40.0%
TATCATGATCAATCCAGCCA+TGG - Chr4:23160-23179 None:intergenic 40.0%
TTGGAAGGAAATCAGCTATC+AGG + Chr4:22440-22459 MsG0480018083.01.T01:CDS 40.0%
! CCCCTAAGAAATTTTCGGTT+TGG + Chr4:20786-20805 MsG0480018083.01.T01:intron 40.0%
! CTCCCAAGAAATTTTCGGTT+TGG - Chr4:21758-21777 None:intergenic 40.0%
! GGTTTTCCTTTCTGATTCAC+AGG + Chr4:23338-23357 MsG0480018083.01.T01:intron 40.0%
! TTCCCCCCCTAAGAAATTTT+CGG + Chr4:20781-20800 MsG0480018083.01.T01:intron 40.0%
!! ACATTTTGCTGAGTTGGATG+GGG + Chr4:21689-21708 MsG0480018083.01.T01:intron 40.0%
!! ACATTTTGCTGAGTTGGATG+GGG - Chr4:21708-21689 None:intergenic 40.0%
!! CAGATATCCTTGAGTTGATG+AGG - Chr4:23210-23229 None:intergenic 40.0%
!! TTCTGGAACTTAACTTCCAG+CGG + Chr4:22075-22094 MsG0480018083.01.T01:intron 40.0%
!! TTTGATTTGCATCGAGCTTC+TGG - Chr4:20390-20409 None:intergenic 40.0%
AAGAGACACCAAGGTAGGTT+TGG + Chr4:22810-22829 MsG0480018083.01.T01:intron 45.0%
ACTACAAGAGACACCAAGGT+AGG + Chr4:22805-22824 MsG0480018083.01.T01:intron 45.0%
AGGTGATTGATGCTCAGTAC+AGG - Chr4:20244-20263 None:intergenic 45.0%
CCAGAAGCTATAGTTCCTGA+AGG - Chr4:22061-22080 None:intergenic 45.0%
CCAGTGTCTTACTTGTGGAA+TGG + Chr4:21943-21962 MsG0480018083.01.T01:intron 45.0%
CCATTCCACAAGTAAGACAC+TGG - Chr4:21946-21965 None:intergenic 45.0%
CCTTCAGGAACTATAGCTTC+TGG + Chr4:22058-22077 MsG0480018083.01.T01:intron 45.0%
CGTAGCTGAGATAGGAAATC+AGG - Chr4:22264-22283 None:intergenic 45.0%
CGTCGAGACATATATGGCAA+AGG + Chr4:20573-20592 MsG0480018083.01.T01:CDS 45.0%
GAACGCACAAGGAGTTGTAT+TGG - Chr4:22473-22492 None:intergenic 45.0%
GGCATTATACTTGGGAAGGA+AGG - Chr4:20332-20351 None:intergenic 45.0%
GTACTCCAGTGTCTTACTTG+TGG + Chr4:21938-21957 MsG0480018083.01.T01:intron 45.0%
GTCTCGACGACATTGAATAG+TGG - Chr4:20562-20581 None:intergenic 45.0%
GTTTGGCCTGTGAATCAGAA+AGG - Chr4:23347-23366 None:intergenic 45.0%
TACGCCGATGATAATCCTTC+AGG + Chr4:22043-22062 MsG0480018083.01.T01:intron 45.0%
TCGACGACATTGAATAGTGG+TGG - Chr4:20559-20578 None:intergenic 45.0%
TCTCTTGTTGCATGAACCTG+AGG - Chr4:22697-22716 None:intergenic 45.0%
! TCAAGAAGCGTAGCTGAGAT+AGG - Chr4:22272-22291 None:intergenic 45.0%
!! CATTTTGCTGAGTTGGATGG+GGG + Chr4:21690-21709 MsG0480018083.01.T01:intron 45.0%
!! CATTTTGCTGAGTTGGATGG+GGG - Chr4:21709-21690 None:intergenic 45.0%
!! TGGAGGCATTATACTTGGGA+AGG - Chr4:20336-20355 None:intergenic 45.0%
!! TGTAATACGTGGCGCTGATT+TGG + Chr4:20870-20889 MsG0480018083.01.T01:intron 45.0%
!! TTGTGATGATGGCACCAACA+TGG + Chr4:23413-23432 MsG0480018083.01.T01:CDS 45.0%
!!! TAATTTTTTAAAAAAGAATT+GGG + Chr4:21429-21448 MsG0480018083.01.T01:intron 5.0%
!!! TTAATTTTTTAAAAAAGAAT+TGG + Chr4:21428-21447 MsG0480018083.01.T01:intron 5.0%
!!! TTTAATATTTTTTTAGTTTT+GGG - Chr4:20999-21018 None:intergenic 5.0%
!!! TTTTAATATTTTTTTAGTTT+TGG - Chr4:21000-21019 None:intergenic 5.0%
AATTTCTTAGGGGGGGAACC+TGG - Chr4:20779-20798 None:intergenic 50.0%
ATGTTGGTACGGATTCGCCA+AGG + Chr4:21980-21999 MsG0480018083.01.T01:intron 50.0%
CTAAGCTGCCAGTGACAACT+TGG + Chr4:20300-20319 MsG0480018083.01.T01:intron 50.0%
GGCCTAAACTGCAGCTATGT+TGG + Chr4:21964-21983 MsG0480018083.01.T01:intron 50.0%
TCGGCTCCTACCAATGTCAA+TGG - Chr4:22845-22864 None:intergenic 50.0%
TGGGATCAAGAGAAACTGGC+AGG + Chr4:21907-21926 MsG0480018083.01.T01:intron 50.0%
! GCATCTGGAACAGTCTACCA+TGG + Chr4:23140-23159 MsG0480018083.01.T01:CDS 50.0%
!! GTTGTGGAGAAAGGAGCATC+TGG + Chr4:23125-23144 MsG0480018083.01.T01:CDS 50.0%
CTGGAACAGTCTACCATGGC+TGG + Chr4:23144-23163 MsG0480018083.01.T01:CDS 55.0%
GAGCATCAATCACCTTCGGC+TGG + Chr4:20249-20268 MsG0480018083.01.T01:intron 55.0%
! TTGCTGAGTTGGATGGGGGA+GGG + Chr4:21694-21713 MsG0480018083.01.T01:intron 55.0%
! TTGCTGAGTTGGATGGGGGA+GGG - Chr4:21713-21694 None:intergenic 55.0%
! TTTGCTGAGTTGGATGGGGG+AGG + Chr4:21693-21712 MsG0480018083.01.T01:intron 55.0%
! TTTGCTGAGTTGGATGGGGG+AGG - Chr4:21712-21693 None:intergenic 55.0%
!! AATCACCTTCGGCTGGCCTA+TGG + Chr4:20256-20275 MsG0480018083.01.T01:intron 55.0%
TGCAACCATAGGCCAGCCGA+AGG - Chr4:20264-20283 None:intergenic 60.0%
! TGCTGAGTTGGATGGGGGAG+GGG + Chr4:21695-21714 MsG0480018083.01.T01:intron 60.0%
! TGCTGAGTTGGATGGGGGAG+GGG - Chr4:21714-21695 None:intergenic 60.0%
!!! GGATGGGGGAGGGGGTATTT+TGG + Chr4:21704-21723 MsG0480018083.01.T01:intron 60.0%
! GCTGAGTTGGATGGGGGAGG+GGG + Chr4:21696-21715 MsG0480018083.01.T01:intron 65.0%
Chromosome Type Strat End Strand Name
Chr4 gene 20177 23446 20177 ID=MsG0480018083.01;Name=MsG0480018083.01
Chr4 mRNA 20177 23446 20177 ID=MsG0480018083.01.T01;Parent=MsG0480018083.01;Name=MsG0480018083.01.T01;_AED=0.49;_eAED=0.52;_QI=0|0|0|1|0|0|5|0|269
Chr4 exon 20177 20183 20177 ID=MsG0480018083.01.T01:exon:381;Parent=MsG0480018083.01.T01
Chr4 exon 20305 20779 20305 ID=MsG0480018083.01.T01:exon:382;Parent=MsG0480018083.01.T01
Chr4 exon 22436 22516 22436 ID=MsG0480018083.01.T01:exon:383;Parent=MsG0480018083.01.T01
Chr4 exon 23085 23244 23085 ID=MsG0480018083.01.T01:exon:384;Parent=MsG0480018083.01.T01
Chr4 exon 23360 23446 23360 ID=MsG0480018083.01.T01:exon:385;Parent=MsG0480018083.01.T01
Chr4 CDS 20177 20183 20177 ID=MsG0480018083.01.T01:cds;Parent=MsG0480018083.01.T01
Chr4 CDS 20305 20779 20305 ID=MsG0480018083.01.T01:cds;Parent=MsG0480018083.01.T01
Chr4 CDS 22436 22516 22436 ID=MsG0480018083.01.T01:cds;Parent=MsG0480018083.01.T01
Chr4 CDS 23085 23244 23085 ID=MsG0480018083.01.T01:cds;Parent=MsG0480018083.01.T01
Chr4 CDS 23360 23446 23360 ID=MsG0480018083.01.T01:cds;Parent=MsG0480018083.01.T01
Gene Sequence

>MsG0480018083.01.T01

ATGAGGGCTGCCAGTGACAACTTGGAATTTTCCTTCCTTCCCAAGTATAATGCCTCCACATATTATGTGTACATGCACTTTGCTGAAATCCAGAAGCTCGATGCAAATCAAATTAGAGAGTTCAACATTTTTGTAAATGGGCAGCTTATAAATAGTGACCTATTCATTCCTTTGTATCTTCAGAACCTGTATTATATATCAGTTATTAGTGAAACGAAGTTGGAACTTTGGTTTAATAAGACTAGTAGATCAACTCTTCCACCACTATTCAATGTCGTCGAGACATATATGGCAAAGGACTTCTTACAATCAGAAACATATCAAACCGATGGTATGTACTATTTAGTTAGATGCACTGATTTTAATCTCAAATATTTATTAACAATTAATTCAAGACCATGCACTTCATTATTTACATGGACTATTCTTACAATCTTATTCGTATGGGTTAATAGTGTTTTTCCTTTTGTAGTCATTTCCAGAAACTTGGAAGGAAATCAGCTATCAGGATCAATTCCAATACAACTCCTTGTGCGTTCAAAGAATAGTATGCTCGAATCCAACTATGAAGAAGTGTTAAACATTACCAGAAACTTTGAAAAGGTTGTGGAGAAAGGAGCATCTGGAACAGTCTACCATGGCTGGATTGATCATGATACTGAGGTAGCTGTCAAAATGCTATCTTCCTCATCAACTCAAGGATATCTGCAATTTCAAGCAGAGGCCAAACTTTTTGCTGTAGTTCATCATAAATACTTGACAGGTCTTATAGGGTATTGTGATGATGGCACCAACATGGCTCTAATCTAG
Protein sequence

>MsG0480018083.01.T01

MRAASDNLEFSFLPKYNASTYYVYMHFAEIQKLDANQIREFNIFVNGQLINSDLFIPLYLQNLYYISVISETKLELWFNKTSRSTLPPLFNVVETYMAKDFLQSETYQTDGMYYLVRCTDFNLKYLLTINSRPCTSLFTWTILTILFVWVNSVFPFVVISRNLEGNQLSGSIPIQLLVRSKNSMLESNYEEVLNITRNFEKVVEKGASGTVYHGWIDHDTEVAVKMLSSSSTQGYLQFQAEAKLFAVVHHKYLTGLIGYCDDGTNMALI*