Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480019438.01.T01 | XP_003605474.1 | 73.932 | 234 | 44 | 2 | 1 | 222 | 1 | 229 | 9.27E-112 | 329 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480019438.01.T01 | Q9FJK3 | 54.545 | 154 | 69 | 1 | 1 | 154 | 1 | 153 | 6.38E-45 | 155 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480019438.01.T01 | G7JM29 | 73.932 | 234 | 44 | 2 | 1 | 222 | 1 | 229 | 4.43e-112 | 329 |
| Gene ID | Type | Classification |
|---|---|---|
| MsG0480019438.01.T01 | TF | MADS-M-type |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480019438.01.T01 | MTR_4g031910 | 73.932 | 234 | 44 | 2 | 1 | 222 | 1 | 229 | 1.12e-115 | 329 |
| MsG0480019438.01.T01 | MTR_4g032290 | 70.902 | 244 | 36 | 2 | 1 | 222 | 1 | 231 | 7.33e-111 | 317 |
| MsG0480019438.01.T01 | MTR_4g032620 | 58.369 | 233 | 84 | 2 | 1 | 222 | 1 | 231 | 6.63e-95 | 277 |
| MsG0480019438.01.T01 | MTR_8g036130 | 57.600 | 250 | 75 | 4 | 1 | 222 | 1 | 247 | 1.99e-90 | 266 |
| MsG0480019438.01.T01 | MTR_4g032260 | 81.529 | 157 | 29 | 0 | 1 | 157 | 1 | 157 | 2.38e-83 | 245 |
| MsG0480019438.01.T01 | MTR_3g065100 | 47.934 | 242 | 99 | 4 | 1 | 219 | 1 | 238 | 1.08e-63 | 198 |
| MsG0480019438.01.T01 | MTR_3g466980 | 45.794 | 214 | 110 | 3 | 1 | 214 | 1 | 208 | 3.49e-61 | 191 |
| MsG0480019438.01.T01 | MTR_2g035610 | 72.951 | 122 | 33 | 0 | 1 | 122 | 1 | 122 | 1.70e-51 | 163 |
| MsG0480019438.01.T01 | MTR_4g032270 | 56.934 | 137 | 44 | 2 | 94 | 222 | 2 | 131 | 9.48e-46 | 149 |
| MsG0480019438.01.T01 | MTR_5g075380 | 46.452 | 155 | 82 | 1 | 1 | 155 | 1 | 154 | 2.80e-45 | 148 |
| MsG0480019438.01.T01 | MTR_3g466830 | 47.020 | 151 | 79 | 1 | 3 | 153 | 2 | 151 | 6.40e-45 | 147 |
| MsG0480019438.01.T01 | MTR_4g063790 | 44.156 | 154 | 86 | 0 | 1 | 154 | 1 | 154 | 1.52e-44 | 147 |
| MsG0480019438.01.T01 | MTR_3g467080 | 42.308 | 156 | 90 | 0 | 1 | 156 | 1 | 156 | 1.78e-42 | 141 |
| MsG0480019438.01.T01 | MTR_5g047580 | 44.872 | 156 | 84 | 2 | 1 | 156 | 1 | 154 | 4.46e-41 | 137 |
| MsG0480019438.01.T01 | MTR_2g016210 | 38.983 | 177 | 107 | 1 | 1 | 176 | 1 | 177 | 1.18e-39 | 136 |
| MsG0480019438.01.T01 | MTR_3g031100 | 33.929 | 224 | 136 | 4 | 1 | 219 | 1 | 217 | 1.25e-39 | 136 |
| MsG0480019438.01.T01 | MTR_3g466890 | 44.079 | 152 | 84 | 1 | 3 | 154 | 2 | 152 | 1.62e-39 | 134 |
| MsG0480019438.01.T01 | MTR_1g077390 | 41.667 | 156 | 89 | 2 | 1 | 156 | 1 | 154 | 2.08e-38 | 130 |
| MsG0480019438.01.T01 | MTR_1g090783 | 40.260 | 154 | 90 | 2 | 3 | 156 | 2 | 153 | 2.67e-35 | 122 |
| MsG0480019438.01.T01 | MTR_1g077320 | 44.231 | 156 | 85 | 2 | 1 | 156 | 1 | 154 | 2.79e-35 | 123 |
| MsG0480019438.01.T01 | MTR_7g011950 | 43.590 | 156 | 86 | 2 | 1 | 156 | 1 | 154 | 6.34e-35 | 122 |
| MsG0480019438.01.T01 | MTR_3g465410 | 43.651 | 126 | 71 | 0 | 29 | 154 | 1 | 126 | 1.57e-34 | 120 |
| MsG0480019438.01.T01 | MTR_1g090710 | 38.961 | 154 | 93 | 1 | 1 | 154 | 1 | 153 | 2.71e-34 | 120 |
| MsG0480019438.01.T01 | MTR_4g028720 | 42.949 | 156 | 87 | 2 | 1 | 156 | 1 | 154 | 7.73e-34 | 119 |
| MsG0480019438.01.T01 | MTR_1g090697 | 40.667 | 150 | 87 | 2 | 1 | 150 | 1 | 148 | 9.30e-34 | 119 |
| MsG0480019438.01.T01 | MTR_1g077300 | 43.590 | 156 | 84 | 2 | 1 | 156 | 1 | 152 | 1.69e-33 | 118 |
| MsG0480019438.01.T01 | MTR_1g084950 | 43.590 | 156 | 86 | 2 | 1 | 156 | 1 | 154 | 4.07e-33 | 117 |
| MsG0480019438.01.T01 | MTR_4g028800 | 77.143 | 70 | 14 | 1 | 1 | 70 | 1 | 68 | 2.96e-32 | 112 |
| MsG0480019438.01.T01 | MTR_7g055800 | 52.137 | 117 | 28 | 2 | 1 | 117 | 1 | 89 | 1.17e-30 | 108 |
| MsG0480019438.01.T01 | MTR_3g031240 | 32.692 | 156 | 105 | 0 | 1 | 156 | 1 | 156 | 1.76e-29 | 108 |
| MsG0480019438.01.T01 | MTR_3g466900 | 39.837 | 123 | 73 | 1 | 32 | 154 | 2 | 123 | 5.25e-28 | 103 |
| MsG0480019438.01.T01 | MTR_7g055790 | 54.054 | 111 | 33 | 1 | 1 | 111 | 59 | 151 | 2.62e-27 | 102 |
| MsG0480019438.01.T01 | MTR_3g466930 | 37.398 | 123 | 76 | 1 | 32 | 154 | 2 | 123 | 1.49e-25 | 97.1 |
| MsG0480019438.01.T01 | MTR_2g035580 | 36.306 | 157 | 99 | 1 | 1 | 157 | 1 | 156 | 2.32e-25 | 97.4 |
| MsG0480019438.01.T01 | MTR_7g055940 | 50.943 | 106 | 24 | 2 | 1 | 106 | 1 | 78 | 3.18e-25 | 94.7 |
| MsG0480019438.01.T01 | MTR_7g106510 | 39.370 | 127 | 77 | 0 | 3 | 129 | 6 | 132 | 9.68e-25 | 101 |
| MsG0480019438.01.T01 | MTR_4g019670 | 40.157 | 127 | 76 | 0 | 3 | 129 | 6 | 132 | 1.14e-24 | 101 |
| MsG0480019438.01.T01 | MTR_5g047560 | 35.256 | 156 | 83 | 3 | 1 | 156 | 1 | 138 | 1.03e-22 | 90.1 |
| MsG0480019438.01.T01 | MTR_3g093900 | 28.641 | 206 | 128 | 4 | 3 | 196 | 6 | 204 | 1.65e-22 | 95.5 |
| MsG0480019438.01.T01 | MTR_2g035590 | 60.494 | 81 | 32 | 0 | 74 | 154 | 1 | 81 | 4.79e-20 | 81.6 |
| MsG0480019438.01.T01 | MTR_6g018920 | 35.398 | 113 | 66 | 4 | 1 | 107 | 1 | 112 | 2.28e-13 | 68.6 |
| MsG0480019438.01.T01 | MTR_6g005450 | 35.398 | 113 | 66 | 4 | 1 | 107 | 1 | 112 | 2.54e-13 | 68.2 |
| MsG0480019438.01.T01 | MTR_1g114730 | 32.743 | 113 | 69 | 3 | 1 | 107 | 1 | 112 | 6.05e-13 | 67.4 |
| MsG0480019438.01.T01 | MTR_6g005440 | 36.283 | 113 | 65 | 4 | 1 | 107 | 1 | 112 | 4.69e-11 | 61.6 |
| MsG0480019438.01.T01 | MTR_4g084780 | 37.615 | 109 | 52 | 2 | 74 | 166 | 1 | 109 | 6.36e-11 | 58.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480019438.01.T01 | AT5G48670 | 54.545 | 154 | 69 | 1 | 1 | 154 | 1 | 153 | 6.50e-46 | 155 |
| MsG0480019438.01.T01 | AT1G65330 | 43.605 | 172 | 87 | 2 | 3 | 165 | 2 | 172 | 6.92e-42 | 143 |
| MsG0480019438.01.T01 | AT1G65300 | 41.618 | 173 | 91 | 2 | 3 | 166 | 2 | 173 | 4.59e-41 | 141 |
| MsG0480019438.01.T01 | AT5G26630 | 42.927 | 205 | 106 | 2 | 1 | 195 | 1 | 204 | 2.20e-40 | 138 |
| MsG0480019438.01.T01 | AT5G26650 | 43.421 | 152 | 85 | 1 | 5 | 156 | 3 | 153 | 9.26e-37 | 132 |
| MsG0480019438.01.T01 | AT5G27960 | 41.566 | 166 | 86 | 3 | 5 | 160 | 3 | 167 | 2.51e-36 | 130 |
| MsG0480019438.01.T01 | AT1G31630 | 37.278 | 169 | 95 | 3 | 3 | 162 | 2 | 168 | 8.98e-36 | 129 |
| MsG0480019438.01.T01 | AT1G31640 | 39.073 | 151 | 90 | 2 | 3 | 153 | 2 | 150 | 5.83e-32 | 121 |
| MsG0480019438.01.T01 | AT2G28700 | 38.650 | 163 | 95 | 2 | 1 | 161 | 1 | 160 | 9.18e-32 | 118 |
| MsG0480019438.01.T01 | AT5G27810 | 55.914 | 93 | 41 | 0 | 29 | 121 | 1 | 93 | 1.82e-31 | 112 |
| MsG0480019438.01.T01 | AT3G05860 | 36.709 | 158 | 99 | 1 | 1 | 158 | 1 | 157 | 4.86e-31 | 113 |
| MsG0480019438.01.T01 | AT3G05860 | 36.709 | 158 | 99 | 1 | 1 | 158 | 1 | 157 | 1.54e-30 | 113 |
| MsG0480019438.01.T01 | AT3G05860 | 36.709 | 158 | 99 | 1 | 1 | 158 | 1 | 157 | 1.68e-30 | 113 |
| MsG0480019438.01.T01 | AT1G22590 | 32.051 | 156 | 102 | 1 | 1 | 156 | 1 | 152 | 1.49e-25 | 98.2 |
| MsG0480019438.01.T01 | AT5G26580 | 35.714 | 154 | 84 | 2 | 1 | 154 | 1 | 139 | 2.03e-25 | 102 |
| MsG0480019438.01.T01 | AT5G06500 | 34.337 | 166 | 107 | 2 | 1 | 166 | 1 | 164 | 6.07e-22 | 90.5 |
| MsG0480019438.01.T01 | AT2G40210 | 40.310 | 129 | 76 | 1 | 1 | 129 | 1 | 128 | 4.97e-20 | 87.4 |
| MsG0480019438.01.T01 | AT5G58890 | 38.583 | 127 | 67 | 5 | 6 | 123 | 6 | 130 | 2.21e-16 | 76.6 |
| MsG0480019438.01.T01 | AT5G55690 | 42.308 | 78 | 38 | 2 | 1 | 71 | 1 | 78 | 2.01e-13 | 68.2 |
| MsG0480019438.01.T01 | AT5G55690 | 42.308 | 78 | 38 | 2 | 1 | 71 | 1 | 78 | 2.01e-13 | 68.2 |
| MsG0480019438.01.T01 | AT2G15660 | 30.973 | 113 | 73 | 2 | 38 | 150 | 31 | 138 | 1.18e-11 | 62.8 |
Find 59 sgRNAs with CRISPR-Local
Find 57 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAGAGAAGAAATGGCAATTA+TGG | 0.213502 | 4:+20424600 | MsG0480019438.01.T01:CDS |
| AGAAACAAAGAAAAGAAAAT+AGG | 0.231520 | 4:+20424404 | MsG0480019438.01.T01:CDS |
| CCCTTTGGTGAGATCAATTC+TGG | 0.238779 | 4:+20424721 | MsG0480019438.01.T01:CDS |
| TACCAATGTCCTTCAAATTA+TGG | 0.254451 | 4:-20424531 | None:intergenic |
| ATCCTTCAAGGTAGTAAATC+AGG | 0.301540 | 4:-20424751 | None:intergenic |
| AAGAAAGGGTCTATTGAAAA+AGG | 0.312767 | 4:+20424171 | MsG0480019438.01.T01:CDS |
| ATCTCTGGCTGAGGCTCATA+AGG | 0.350996 | 4:-20424247 | None:intergenic |
| AAAATGTCATCATCATTAAT+AGG | 0.355958 | 4:-20424643 | None:intergenic |
| ATGAGCCTCAGCCAGAGATT+TGG | 0.374512 | 4:+20424251 | MsG0480019438.01.T01:CDS |
| TTTGCAAAGTCAATTATTGA+TGG | 0.379269 | 4:+20424663 | MsG0480019438.01.T01:CDS |
| GCCCTGATTTACTACCTTGA+AGG | 0.388674 | 4:+20424749 | MsG0480019438.01.T01:CDS |
| GAAGGACATTGGTAGACGTT+TGG | 0.410243 | 4:+20424540 | MsG0480019438.01.T01:CDS |
| TCTGGTGAAGGCCAAATCTC+TGG | 0.413104 | 4:-20424262 | None:intergenic |
| GAAACAAAGAAAAGAAAATA+GGG | 0.419680 | 4:+20424405 | MsG0480019438.01.T01:CDS |
| AGAGAAGAAATGGCAATTAT+GGG | 0.427004 | 4:+20424601 | MsG0480019438.01.T01:CDS |
| CTCCTAGATGCTGCTGGAAG+TGG | 0.439793 | 4:-20424580 | None:intergenic |
| AGCATCTAGGAGAGAAGAAA+TGG | 0.439960 | 4:+20424591 | MsG0480019438.01.T01:CDS |
| GTTGATTGACCATAATTTGA+AGG | 0.445081 | 4:+20424522 | MsG0480019438.01.T01:CDS |
| GTCATACAAGAAAAGAAGAA+AGG | 0.460159 | 4:+20424156 | MsG0480019438.01.T01:CDS |
| CACAACCATGGCTAGAAGTA+AGG | 0.461347 | 4:+20424093 | None:intergenic |
| GATGCTGCTGGAAGTGGTGG+TGG | 0.468523 | 4:-20424574 | None:intergenic |
| CTCATAAGGGCCATACACTA+TGG | 0.468858 | 4:-20424233 | None:intergenic |
| TCTTCTCTCCTAGATGCTGC+TGG | 0.474575 | 4:-20424586 | None:intergenic |
| TTATGGGTCATGGCCATGTT+GGG | 0.476409 | 4:+20424617 | MsG0480019438.01.T01:CDS |
| CTTGACACAAAGGGTTCTGA+AGG | 0.478789 | 4:+20424366 | MsG0480019438.01.T01:CDS |
| TCAATTATTGATGGACTCAA+TGG | 0.482426 | 4:+20424672 | MsG0480019438.01.T01:CDS |
| TTGATTTGAGTTATCTTACT+TGG | 0.482489 | 4:+20424500 | MsG0480019438.01.T01:CDS |
| TCATACAAGAAAAGAAGAAA+GGG | 0.494239 | 4:+20424157 | MsG0480019438.01.T01:CDS |
| TGCAGCATCATTGACAATGA+AGG | 0.502295 | 4:-20424125 | None:intergenic |
| AGAGACTTTCTTGACACAAA+GGG | 0.517022 | 4:+20424357 | MsG0480019438.01.T01:CDS |
| GACCATAATTTGAAGGACAT+TGG | 0.517963 | 4:+20424529 | MsG0480019438.01.T01:CDS |
| GGACATTGGTAGACGTTTGG+CGG | 0.524285 | 4:+20424543 | MsG0480019438.01.T01:CDS |
| CACCACTTCCAGCAGCATCT+AGG | 0.525167 | 4:+20424578 | MsG0480019438.01.T01:CDS |
| TTTGTGTCAAGAAAGTCTCT+TGG | 0.525855 | 4:-20424354 | None:intergenic |
| ATGTCTCATTGTCTCAATGA+AGG | 0.529431 | 4:+20424448 | MsG0480019438.01.T01:CDS |
| TTTAACCTTACTTCTAGCCA+TGG | 0.533701 | 4:-20424098 | None:intergenic |
| CTAGATGCTGCTGGAAGTGG+TGG | 0.550788 | 4:-20424577 | None:intergenic |
| GAAATGGCAATTATGGGTCA+TGG | 0.553615 | 4:+20424607 | MsG0480019438.01.T01:CDS |
| CCAGAATTGATCTCACCAAA+GGG | 0.554343 | 4:-20424721 | None:intergenic |
| GTGCAAGAGACAGTGCCCTT+TGG | 0.557727 | 4:+20424706 | MsG0480019438.01.T01:CDS |
| GAAGGCCAAATCTCTGGCTG+AGG | 0.560020 | 4:-20424256 | None:intergenic |
| ATTATGGGTCATGGCCATGT+TGG | 0.565284 | 4:+20424616 | MsG0480019438.01.T01:CDS |
| TCTCTGGCTGAGGCTCATAA+GGG | 0.571102 | 4:-20424246 | None:intergenic |
| GAAGCATGTGCCATAGTGTA+TGG | 0.578316 | 4:+20424223 | MsG0480019438.01.T01:CDS |
| GAGATTTGGCCTTCACCAGA+GGG | 0.580805 | 4:+20424265 | MsG0480019438.01.T01:CDS |
| TCCTTCAAGGTAGTAAATCA+GGG | 0.588454 | 4:-20424750 | None:intergenic |
| CATTAATAGGTATCCCAACA+TGG | 0.589301 | 4:-20424630 | None:intergenic |
| TCCAGAATTGATCTCACCAA+AGG | 0.590517 | 4:-20424722 | None:intergenic |
| GATTTGGCCTTCACCAGAGG+GGG | 0.601928 | 4:+20424267 | MsG0480019438.01.T01:CDS |
| TTGATGGACTCAATGGTGGC+TGG | 0.607204 | 4:+20424679 | MsG0480019438.01.T01:CDS |
| AAGAGACTTTCTTGACACAA+AGG | 0.607804 | 4:+20424356 | MsG0480019438.01.T01:CDS |
| AGAGATTTGGCCTTCACCAG+AGG | 0.617598 | 4:+20424264 | MsG0480019438.01.T01:CDS |
| ACATGCTTCAATGCCACAGA+GGG | 0.623111 | 4:-20424209 | None:intergenic |
| TCATTGTCAATGATGCTGCA+AGG | 0.652548 | 4:+20424128 | MsG0480019438.01.T01:CDS |
| ATTATTGATGGACTCAATGG+TGG | 0.666274 | 4:+20424675 | MsG0480019438.01.T01:CDS |
| GCTGAACTTAGCACCCTCTG+TGG | 0.677042 | 4:+20424196 | MsG0480019438.01.T01:CDS |
| TGTGCACGACAATATGTCAA+CGG | 0.688304 | 4:+20424477 | MsG0480019438.01.T01:CDS |
| AGATTTGGCCTTCACCAGAG+GGG | 0.703414 | 4:+20424266 | MsG0480019438.01.T01:CDS |
| CACATGCTTCAATGCCACAG+AGG | 0.738807 | 4:-20424210 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATGTCATCATCATTAAT+AGG | - | Chr4:20424646-20424665 | None:intergenic | 20.0% |
| !! | AGAAACAAAGAAAAGAAAAT+AGG | + | Chr4:20424404-20424423 | MsG0480019438.01.T01:CDS | 20.0% |
| !! | GAAACAAAGAAAAGAAAATA+GGG | + | Chr4:20424405-20424424 | MsG0480019438.01.T01:CDS | 20.0% |
| ! | TCATACAAGAAAAGAAGAAA+GGG | + | Chr4:20424157-20424176 | MsG0480019438.01.T01:CDS | 25.0% |
| ! | TTTGCAAAGTCAATTATTGA+TGG | + | Chr4:20424663-20424682 | MsG0480019438.01.T01:CDS | 25.0% |
| !! | TTGATTTGAGTTATCTTACT+TGG | + | Chr4:20424500-20424519 | MsG0480019438.01.T01:CDS | 25.0% |
| AAGAAAGGGTCTATTGAAAA+AGG | + | Chr4:20424171-20424190 | MsG0480019438.01.T01:CDS | 30.0% | |
| AGAGAAGAAATGGCAATTAT+GGG | + | Chr4:20424601-20424620 | MsG0480019438.01.T01:CDS | 30.0% | |
| GTCATACAAGAAAAGAAGAA+AGG | + | Chr4:20424156-20424175 | MsG0480019438.01.T01:CDS | 30.0% | |
| GTTGATTGACCATAATTTGA+AGG | + | Chr4:20424522-20424541 | MsG0480019438.01.T01:CDS | 30.0% | |
| TACCAATGTCCTTCAAATTA+TGG | - | Chr4:20424534-20424553 | None:intergenic | 30.0% | |
| !! | TCAATTATTGATGGACTCAA+TGG | + | Chr4:20424672-20424691 | MsG0480019438.01.T01:CDS | 30.0% |
| AAGAGACTTTCTTGACACAA+AGG | + | Chr4:20424356-20424375 | MsG0480019438.01.T01:CDS | 35.0% | |
| AGAGACTTTCTTGACACAAA+GGG | + | Chr4:20424357-20424376 | MsG0480019438.01.T01:CDS | 35.0% | |
| ATGTCTCATTGTCTCAATGA+AGG | + | Chr4:20424448-20424467 | MsG0480019438.01.T01:CDS | 35.0% | |
| CATTAATAGGTATCCCAACA+TGG | - | Chr4:20424633-20424652 | None:intergenic | 35.0% | |
| GACCATAATTTGAAGGACAT+TGG | + | Chr4:20424529-20424548 | MsG0480019438.01.T01:CDS | 35.0% | |
| GAGAGAAGAAATGGCAATTA+TGG | + | Chr4:20424600-20424619 | MsG0480019438.01.T01:CDS | 35.0% | |
| TTTGTGTCAAGAAAGTCTCT+TGG | - | Chr4:20424357-20424376 | None:intergenic | 35.0% | |
| !! | ATTATTGATGGACTCAATGG+TGG | + | Chr4:20424675-20424694 | MsG0480019438.01.T01:CDS | 35.0% |
| !! | TGAATTTTGAGAGCACAGAT+TGG | - | Chr4:20424294-20424313 | None:intergenic | 35.0% |
| AGCATCTAGGAGAGAAGAAA+TGG | + | Chr4:20424591-20424610 | MsG0480019438.01.T01:CDS | 40.0% | |
| CCAGAATTGATCTCACCAAA+GGG | - | Chr4:20424724-20424743 | None:intergenic | 40.0% | |
| GAAATGGCAATTATGGGTCA+TGG | + | Chr4:20424607-20424626 | MsG0480019438.01.T01:CDS | 40.0% | |
| TCATTGTCAATGATGCTGCA+AGG | + | Chr4:20424128-20424147 | MsG0480019438.01.T01:CDS | 40.0% | |
| TCCAGAATTGATCTCACCAA+AGG | - | Chr4:20424725-20424744 | None:intergenic | 40.0% | |
| TGCAGCATCATTGACAATGA+AGG | - | Chr4:20424128-20424147 | None:intergenic | 40.0% | |
| TGTGCACGACAATATGTCAA+CGG | + | Chr4:20424477-20424496 | MsG0480019438.01.T01:CDS | 40.0% | |
| ACATGCTTCAATGCCACAGA+GGG | - | Chr4:20424212-20424231 | None:intergenic | 45.0% | |
| ATTATGGGTCATGGCCATGT+TGG | + | Chr4:20424616-20424635 | MsG0480019438.01.T01:CDS | 45.0% | |
| CCCTTTGGTGAGATCAATTC+TGG | + | Chr4:20424721-20424740 | MsG0480019438.01.T01:CDS | 45.0% | |
| CTCATAAGGGCCATACACTA+TGG | - | Chr4:20424236-20424255 | None:intergenic | 45.0% | |
| GAAGCATGTGCCATAGTGTA+TGG | + | Chr4:20424223-20424242 | MsG0480019438.01.T01:CDS | 45.0% | |
| GAAGGACATTGGTAGACGTT+TGG | + | Chr4:20424540-20424559 | MsG0480019438.01.T01:CDS | 45.0% | |
| TTATGGGTCATGGCCATGTT+GGG | + | Chr4:20424617-20424636 | MsG0480019438.01.T01:CDS | 45.0% | |
| ! | CTTGACACAAAGGGTTCTGA+AGG | + | Chr4:20424366-20424385 | MsG0480019438.01.T01:CDS | 45.0% |
| ATCTCTGGCTGAGGCTCATA+AGG | - | Chr4:20424250-20424269 | None:intergenic | 50.0% | |
| ATGAGCCTCAGCCAGAGATT+TGG | + | Chr4:20424251-20424270 | MsG0480019438.01.T01:CDS | 50.0% | |
| CACATGCTTCAATGCCACAG+AGG | - | Chr4:20424213-20424232 | None:intergenic | 50.0% | |
| GGACATTGGTAGACGTTTGG+CGG | + | Chr4:20424543-20424562 | MsG0480019438.01.T01:CDS | 50.0% | |
| TCTCTGGCTGAGGCTCATAA+GGG | - | Chr4:20424249-20424268 | None:intergenic | 50.0% | |
| TCTGGTGAAGGCCAAATCTC+TGG | - | Chr4:20424265-20424284 | None:intergenic | 50.0% | |
| TCTTCTCTCCTAGATGCTGC+TGG | - | Chr4:20424589-20424608 | None:intergenic | 50.0% | |
| ! | AGAGATTTGGCCTTCACCAG+AGG | + | Chr4:20424264-20424283 | MsG0480019438.01.T01:CDS | 50.0% |
| ! | AGATTTGGCCTTCACCAGAG+GGG | + | Chr4:20424266-20424285 | MsG0480019438.01.T01:CDS | 50.0% |
| ! | GAGATTTGGCCTTCACCAGA+GGG | + | Chr4:20424265-20424284 | MsG0480019438.01.T01:CDS | 50.0% |
| !! | TTGATGGACTCAATGGTGGC+TGG | + | Chr4:20424679-20424698 | MsG0480019438.01.T01:CDS | 50.0% |
| CACCACTTCCAGCAGCATCT+AGG | + | Chr4:20424578-20424597 | MsG0480019438.01.T01:CDS | 55.0% | |
| CTAGATGCTGCTGGAAGTGG+TGG | - | Chr4:20424580-20424599 | None:intergenic | 55.0% | |
| CTCCTAGATGCTGCTGGAAG+TGG | - | Chr4:20424583-20424602 | None:intergenic | 55.0% | |
| GAAGGCCAAATCTCTGGCTG+AGG | - | Chr4:20424259-20424278 | None:intergenic | 55.0% | |
| GCTGAACTTAGCACCCTCTG+TGG | + | Chr4:20424196-20424215 | MsG0480019438.01.T01:CDS | 55.0% | |
| GTGCAAGAGACAGTGCCCTT+TGG | + | Chr4:20424706-20424725 | MsG0480019438.01.T01:CDS | 55.0% | |
| ! | GATTTGGCCTTCACCAGAGG+GGG | + | Chr4:20424267-20424286 | MsG0480019438.01.T01:CDS | 55.0% |
| AGCACAGATTGGACCCCCTC+TGG | - | Chr4:20424283-20424302 | None:intergenic | 60.0% | |
| GATGCTGCTGGAAGTGGTGG+TGG | - | Chr4:20424577-20424596 | None:intergenic | 60.0% | |
| GATTGGACCCCCTCTGGTGA+AGG | - | Chr4:20424277-20424296 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr4 | gene | 20424100 | 20424768 | 20424100 | ID=MsG0480019438.01;Name=MsG0480019438.01 |
| Chr4 | mRNA | 20424100 | 20424768 | 20424100 | ID=MsG0480019438.01.T01;Parent=MsG0480019438.01;Name=MsG0480019438.01.T01;_AED=0.27;_eAED=0.27;_QI=0|-1|0|1|-1|1|1|0|222 |
| Chr4 | exon | 20424100 | 20424768 | 20424100 | ID=MsG0480019438.01.T01:exon:9874;Parent=MsG0480019438.01.T01 |
| Chr4 | CDS | 20424100 | 20424768 | 20424100 | ID=MsG0480019438.01.T01:cds;Parent=MsG0480019438.01.T01 |
| Gene Sequence |
| Protein sequence |
