AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0480019602.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480019602.01.T01 MTR_4g035590 98.588 354 4 1 2 354 1 354 0.0 733
MsG0480019602.01.T01 MTR_2g062730 79.739 153 29 2 9 159 10 162 2.60e-88 270
MsG0480019602.01.T01 MTR_8g024480 73.494 166 32 1 9 162 15 180 1.94e-87 270
MsG0480019602.01.T01 MTR_5g021710 72.956 159 42 1 2 159 1 159 1.94e-84 260
MsG0480019602.01.T01 MTR_8g076110 66.102 177 57 2 9 182 6 182 1.03e-80 249
MsG0480019602.01.T01 MTR_4g101680 75.497 151 36 1 9 158 7 157 1.16e-80 251
MsG0480019602.01.T01 MTR_4g036030 73.510 151 39 1 9 158 7 157 1.46e-80 249
MsG0480019602.01.T01 MTR_5g012080 45.541 314 138 7 9 318 7 291 5.90e-78 243
MsG0480019602.01.T01 MTR_1g096430 58.883 197 73 4 9 197 7 203 6.65e-74 232
MsG0480019602.01.T01 MTR_6g477900 57.051 156 63 2 8 160 5 159 8.30e-60 193
MsG0480019602.01.T01 MTR_2g078700 58.385 161 57 3 6 159 20 177 6.49e-59 195
MsG0480019602.01.T01 MTR_3g435150 61.688 154 51 3 9 157 16 166 1.16e-58 192
MsG0480019602.01.T01 MTR_2g064090 55.556 153 63 2 9 157 6 157 1.39e-58 193
MsG0480019602.01.T01 MTR_6g084430 60.000 150 56 2 9 157 5 151 1.49e-58 192
MsG0480019602.01.T01 MTR_4g108760 57.143 168 58 3 9 171 17 175 3.17e-58 192
MsG0480019602.01.T01 MTR_3g109340 57.895 152 58 3 9 157 22 170 4.19e-57 189
MsG0480019602.01.T01 MTR_5g076850 51.124 178 76 5 8 177 5 179 5.91e-57 196
MsG0480019602.01.T01 MTR_1g008740 59.740 154 54 4 9 157 13 163 9.13e-57 188
MsG0480019602.01.T01 MTR_1g008740 59.740 154 54 4 9 157 27 177 1.26e-56 188
MsG0480019602.01.T01 MTR_3g070030 59.119 159 56 3 10 162 20 175 4.86e-56 187
MsG0480019602.01.T01 MTR_4g081870 41.877 277 134 10 3 265 3 266 5.44e-56 184
MsG0480019602.01.T01 MTR_3g064580 49.198 187 86 5 8 188 5 188 6.86e-56 193
MsG0480019602.01.T01 MTR_7g085260 60.127 158 51 4 9 157 17 171 1.08e-55 187
MsG0480019602.01.T01 MTR_3g109340 56.209 153 60 3 9 157 22 171 1.32e-55 186
MsG0480019602.01.T01 MTR_6g012670 57.233 159 60 2 9 162 20 175 1.78e-55 184
MsG0480019602.01.T01 MTR_5g041940 54.037 161 64 2 9 162 3 160 9.76e-55 180
MsG0480019602.01.T01 MTR_7g085220 47.027 185 79 3 2 170 1 182 9.98e-55 183
MsG0480019602.01.T01 MTR_2g079990 55.263 152 62 2 9 157 16 164 2.96e-54 182
MsG0480019602.01.T01 MTR_1g069805 54.902 153 63 3 7 157 8 156 8.25e-54 178
MsG0480019602.01.T01 MTR_2g064470 40.400 250 125 7 2 245 4 235 2.87e-53 178
MsG0480019602.01.T01 MTR_2g080010 40.310 258 111 7 1 220 7 259 3.10e-53 179
MsG0480019602.01.T01 MTR_7g011130 51.031 194 68 5 12 182 22 211 5.88e-53 179
MsG0480019602.01.T01 MTR_6g032770 53.459 159 64 4 9 160 18 173 1.33e-52 178
MsG0480019602.01.T01 MTR_3g116070 49.754 203 85 8 8 201 22 216 1.47e-52 177
MsG0480019602.01.T01 MTR_7g097090 54.967 151 62 3 7 155 8 154 1.56e-52 176
MsG0480019602.01.T01 MTR_8g059170 53.896 154 63 2 9 157 14 164 4.80e-52 176
MsG0480019602.01.T01 MTR_7g005280 56.494 154 56 4 9 158 15 161 5.55e-52 173
MsG0480019602.01.T01 MTR_5g014300 39.600 250 140 4 7 249 4 249 1.66e-51 174
MsG0480019602.01.T01 MTR_2157s0010 48.538 171 70 3 2 157 1 168 4.40e-51 171
MsG0480019602.01.T01 MTR_7g011120 55.901 161 56 3 11 159 10 167 7.57e-51 172
MsG0480019602.01.T01 MTR_3g088110 51.553 161 68 3 4 158 2 158 8.11e-51 171
MsG0480019602.01.T01 MTR_3g096920 52.564 156 64 3 9 158 7 158 1.93e-50 170
MsG0480019602.01.T01 MTR_6g011860 50.617 162 64 4 11 159 17 175 2.03e-49 170
MsG0480019602.01.T01 MTR_8g467490 45.503 189 81 5 11 184 16 197 2.49e-49 170
MsG0480019602.01.T01 MTR_8g094580 50.318 157 67 3 9 158 7 159 9.33e-49 166
MsG0480019602.01.T01 MTR_1g090720 52.201 159 66 3 11 160 44 201 1.10e-48 171
MsG0480019602.01.T01 MTR_5g040420 49.390 164 67 3 9 159 14 174 1.29e-48 168
MsG0480019602.01.T01 MTR_4g089135 46.927 179 64 5 9 159 15 190 1.79e-48 167
MsG0480019602.01.T01 MTR_4g098630 51.572 159 66 4 7 157 4 159 1.98e-48 166
MsG0480019602.01.T01 MTR_3g096140 50.331 151 71 2 11 158 9 158 2.29e-48 164
MsG0480019602.01.T01 MTR_2g079990 46.667 180 62 3 9 157 16 192 2.72e-48 167
MsG0480019602.01.T01 MTR_5g069030 53.548 155 66 3 9 159 25 177 3.09e-48 172
MsG0480019602.01.T01 MTR_7g100990 50.633 158 66 3 9 157 11 165 8.89e-48 164
MsG0480019602.01.T01 MTR_3g096140 50.331 151 71 2 11 158 9 158 1.55e-47 164
MsG0480019602.01.T01 MTR_2g093810 50.000 164 70 3 3 157 8 168 3.31e-47 163
MsG0480019602.01.T01 MTR_3g093040 50.323 155 71 4 9 159 108 260 3.34e-47 162
MsG0480019602.01.T01 MTR_8g063550 50.000 154 67 3 11 158 8 157 9.10e-47 162
MsG0480019602.01.T01 MTR_3g093050 50.968 155 70 3 9 159 22 174 1.92e-46 167
MsG0480019602.01.T01 MTR_3g093050 50.314 159 73 3 5 159 18 174 2.36e-46 167
MsG0480019602.01.T01 MTR_8g063550 50.000 154 67 3 11 158 8 157 4.13e-46 163
MsG0480019602.01.T01 MTR_8g063550 50.000 154 67 3 11 158 8 157 5.06e-46 162
MsG0480019602.01.T01 MTR_3g096920 57.252 131 52 2 9 139 7 133 9.37e-46 159
MsG0480019602.01.T01 MTR_0036s0150 50.000 150 71 3 11 157 7 155 1.17e-45 164
MsG0480019602.01.T01 MTR_2g086880 45.856 181 89 4 2 182 11 182 2.13e-45 162
MsG0480019602.01.T01 MTR_2g086880 45.856 181 89 4 2 182 11 182 2.84e-45 163
MsG0480019602.01.T01 MTR_3g070040 51.497 167 64 4 13 171 12 169 2.95e-45 158
MsG0480019602.01.T01 MTR_1g090723 49.007 151 72 3 11 157 10 159 6.45e-45 163
MsG0480019602.01.T01 MTR_8g093580 49.351 154 68 3 11 158 8 157 8.61e-45 160
MsG0480019602.01.T01 MTR_1g090723 49.333 150 72 3 11 157 10 158 9.20e-45 162
MsG0480019602.01.T01 MTR_1g097300 49.333 150 72 2 11 157 21 169 1.03e-44 161
MsG0480019602.01.T01 MTR_1g090723 49.333 150 72 3 11 157 10 158 1.47e-44 162
MsG0480019602.01.T01 MTR_4g134460 46.753 154 77 3 9 160 54 204 2.90e-44 158
MsG0480019602.01.T01 MTR_5g090970 34.091 264 126 7 9 229 18 276 5.52e-43 151
MsG0480019602.01.T01 MTR_4g075980 46.471 170 83 4 11 177 17 181 8.68e-43 150
MsG0480019602.01.T01 MTR_5g090970 33.712 264 126 7 9 229 18 275 1.39e-41 147
MsG0480019602.01.T01 MTR_2g068880 34.538 249 130 9 9 228 21 265 4.74e-40 144
MsG0480019602.01.T01 MTR_2g068920 36.283 226 107 8 9 205 20 237 1.66e-39 142
MsG0480019602.01.T01 MTR_8g099750 44.134 179 82 6 9 177 14 184 5.85e-39 138
MsG0480019602.01.T01 MTR_3g096140 47.445 137 68 2 25 158 2 137 2.38e-38 140
MsG0480019602.01.T01 MTR_3g098810 42.945 163 75 4 9 158 14 171 5.25e-36 131
MsG0480019602.01.T01 MTR_8g023840 47.368 152 73 5 6 154 8 155 2.82e-35 133
MsG0480019602.01.T01 MTR_3g098810 45.865 133 63 2 9 137 14 141 5.97e-33 121
MsG0480019602.01.T01 MTR_2g086690 41.071 168 83 6 7 161 2 166 2.33e-32 122
MsG0480019602.01.T01 MTR_8g023860 46.711 152 68 6 9 154 12 156 3.66e-32 125
MsG0480019602.01.T01 MTR_8g023900 42.683 164 87 5 1 160 4 164 6.66e-31 122
MsG0480019602.01.T01 MTR_8g023900 45.395 152 70 6 12 157 196 340 1.18e-28 116
MsG0480019602.01.T01 MTR_4g052620 38.788 165 86 5 10 162 6 167 5.82e-30 115
MsG0480019602.01.T01 MTR_8g094580 53.465 101 39 2 65 158 6 105 5.90e-30 115
MsG0480019602.01.T01 MTR_8g023930 44.737 152 77 5 9 157 24 171 9.67e-30 119
MsG0480019602.01.T01 MTR_4g094302 36.875 160 79 4 9 157 11 159 2.15e-28 109
MsG0480019602.01.T01 MTR_4g094302 40.458 131 65 3 9 137 11 130 7.15e-27 104
MsG0480019602.01.T01 MTR_8g023880 35.354 198 103 7 5 185 3 192 3.94e-25 102
MsG0480019602.01.T01 MTR_7g105170 34.940 166 96 4 9 162 4 169 1.15e-24 101
MsG0480019602.01.T01 MTR_7g070140 58.667 75 29 1 65 137 17 91 2.02e-24 97.4
MsG0480019602.01.T01 MTR_8g093790 35.593 177 92 7 3 179 4 158 7.34e-24 97.4
MsG0480019602.01.T01 MTR_3g096400 31.953 169 90 6 9 161 7 166 9.52e-18 81.3
MsG0480019602.01.T01 MTR_7g070150 59.259 54 20 2 105 157 5 57 1.41e-16 74.7
MsG0480019602.01.T01 MTR_7g083360 31.013 158 102 6 2 156 1 154 1.09e-14 71.2
MsG0480019602.01.T01 MTR_7g083330 31.884 138 87 6 2 137 11 143 7.79e-12 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480019602.01.T01 AT4G10350 59.840 376 89 13 3 353 3 341 2.61e-142 407
MsG0480019602.01.T01 AT1G33280 56.111 360 90 11 2 350 1 303 2.96e-126 365
MsG0480019602.01.T01 AT4G10350 54.769 325 85 13 54 353 7 294 1.13e-102 304
MsG0480019602.01.T01 AT1G79580 76.048 167 35 2 1 162 5 171 4.96e-89 272
MsG0480019602.01.T01 AT1G79580 76.048 167 35 2 1 162 5 171 4.96e-89 272
MsG0480019602.01.T01 AT1G79580 76.048 167 35 2 1 162 5 171 4.96e-89 272
MsG0480019602.01.T01 AT1G79580 76.048 167 35 2 1 162 5 171 4.96e-89 272
MsG0480019602.01.T01 AT1G79580 76.048 167 35 2 1 162 5 171 4.96e-89 272
MsG0480019602.01.T01 AT1G32770 73.810 168 31 2 9 163 16 183 2.02e-87 268
MsG0480019602.01.T01 AT2G46770 67.403 181 40 2 1 162 5 185 4.45e-85 262
MsG0480019602.01.T01 AT4G36160 76.159 151 35 1 9 158 10 160 1.58e-82 256
MsG0480019602.01.T01 AT4G36160 76.159 151 35 1 9 158 10 160 1.58e-82 256
MsG0480019602.01.T01 AT4G36160 76.159 151 35 1 9 158 14 164 1.63e-82 256
MsG0480019602.01.T01 AT2G18060 73.684 152 39 1 8 158 8 159 1.07e-81 253
MsG0480019602.01.T01 AT2G18060 73.684 152 39 1 8 158 8 159 1.07e-81 253
MsG0480019602.01.T01 AT1G12260 56.780 236 86 7 9 228 7 242 6.94e-81 250
MsG0480019602.01.T01 AT3G61910 67.647 170 39 2 9 162 11 180 1.73e-80 249
MsG0480019602.01.T01 AT1G12260 57.082 233 84 7 9 225 7 239 2.10e-79 248
MsG0480019602.01.T01 AT1G62700 52.713 258 88 7 9 238 7 258 1.53e-78 246
MsG0480019602.01.T01 AT1G62700 52.713 258 88 7 9 238 7 258 1.53e-78 246
MsG0480019602.01.T01 AT5G66300 70.130 154 44 2 8 159 11 164 4.88e-77 239
MsG0480019602.01.T01 AT5G62380 70.199 151 44 1 9 158 7 157 9.68e-76 237
MsG0480019602.01.T01 AT5G62380 70.199 151 44 1 9 158 7 157 9.68e-76 237
MsG0480019602.01.T01 AT1G71930 67.105 152 49 1 7 157 7 158 1.60e-74 233
MsG0480019602.01.T01 AT1G71930 67.105 152 49 1 7 157 7 158 1.60e-74 233
MsG0480019602.01.T01 AT3G18400 60.256 156 57 2 9 162 5 157 2.23e-62 202
MsG0480019602.01.T01 AT3G17730 58.333 156 61 3 8 160 5 159 9.21e-62 198
MsG0480019602.01.T01 AT2G24430 60.377 159 56 3 8 162 15 170 9.76e-62 200
MsG0480019602.01.T01 AT2G24430 60.377 159 56 3 8 162 15 170 9.76e-62 200
MsG0480019602.01.T01 AT5G07680 44.765 277 122 9 9 270 3 263 1.24e-61 200
MsG0480019602.01.T01 AT5G61430 43.972 282 122 10 9 270 16 281 1.86e-61 200
MsG0480019602.01.T01 AT5G07680 44.765 277 122 9 9 270 17 277 2.03e-61 200
MsG0480019602.01.T01 AT5G39610 61.935 155 51 3 9 158 20 171 8.27e-59 192
MsG0480019602.01.T01 AT3G15170 57.500 160 56 4 9 160 20 175 1.56e-56 187
MsG0480019602.01.T01 AT5G17260 57.143 154 61 3 8 157 5 157 2.88e-56 191
MsG0480019602.01.T01 AT1G54330 57.237 152 60 2 8 157 5 153 6.96e-56 185
MsG0480019602.01.T01 AT5G18270 58.599 157 56 4 9 159 21 174 8.59e-56 186
MsG0480019602.01.T01 AT1G76420 53.977 176 71 4 8 179 21 190 1.08e-55 185
MsG0480019602.01.T01 AT3G29035 59.868 152 53 2 9 155 24 172 1.38e-55 184
MsG0480019602.01.T01 AT1G65910 55.484 155 65 2 9 160 6 159 1.49e-55 192
MsG0480019602.01.T01 AT5G53950 56.098 164 62 3 9 165 17 177 2.19e-55 186
MsG0480019602.01.T01 AT5G18270 57.962 157 57 4 9 159 21 174 2.20e-55 184
MsG0480019602.01.T01 AT3G03200 57.143 154 61 3 8 157 5 157 3.27e-55 188
MsG0480019602.01.T01 AT1G69490 50.000 170 75 2 4 166 4 170 8.48e-55 181
MsG0480019602.01.T01 AT3G04060 59.615 156 52 5 9 157 20 171 4.05e-54 181
MsG0480019602.01.T01 AT3G10480 53.659 164 71 2 1 160 19 181 7.01e-54 184
MsG0480019602.01.T01 AT3G10480 53.988 163 71 2 1 160 19 180 1.93e-53 182
MsG0480019602.01.T01 AT3G12977 37.543 293 148 10 1 288 10 272 3.53e-53 177
MsG0480019602.01.T01 AT3G04070 50.000 166 65 3 7 157 8 170 5.62e-53 178
MsG0480019602.01.T01 AT3G10490 52.469 162 72 2 3 160 21 181 9.40e-53 174
MsG0480019602.01.T01 AT4G27410 52.597 154 67 2 9 159 14 164 9.73e-53 176
MsG0480019602.01.T01 AT3G15500 52.288 153 67 2 9 158 14 163 5.16e-52 175
MsG0480019602.01.T01 AT3G10490 52.469 162 72 2 3 160 21 181 1.50e-51 177
MsG0480019602.01.T01 AT1G61110 51.515 165 61 3 9 157 16 177 2.17e-51 174
MsG0480019602.01.T01 AT5G04410 53.947 152 66 2 9 157 9 159 2.41e-51 179
MsG0480019602.01.T01 AT1G52890 51.948 154 68 2 9 159 14 164 3.99e-51 173
MsG0480019602.01.T01 AT3G10500 54.605 152 65 3 9 157 9 159 6.77e-51 178
MsG0480019602.01.T01 AT1G56010 50.000 164 72 3 1 157 11 171 7.48e-51 172
MsG0480019602.01.T01 AT3G04070 45.604 182 65 3 7 157 8 186 5.20e-50 171
MsG0480019602.01.T01 AT5G63790 52.532 158 63 4 9 158 50 203 5.21e-50 170
MsG0480019602.01.T01 AT1G77450 48.795 166 75 3 3 162 4 165 5.35e-50 168
MsG0480019602.01.T01 AT5G63790 52.532 158 63 4 9 158 60 213 6.62e-50 170
MsG0480019602.01.T01 AT1G01720 50.955 157 66 3 9 158 7 159 7.60e-50 169
MsG0480019602.01.T01 AT3G10480 45.408 196 71 2 1 160 19 214 3.39e-49 173
MsG0480019602.01.T01 AT4G27410 48.810 168 69 4 9 159 14 181 4.90e-49 167
MsG0480019602.01.T01 AT5G08790 51.899 158 64 4 9 158 7 160 9.66e-49 166
MsG0480019602.01.T01 AT5G24590 50.000 166 78 3 5 166 9 173 1.85e-48 169
MsG0480019602.01.T01 AT4G28530 50.595 168 59 5 9 157 10 172 2.81e-48 166
MsG0480019602.01.T01 AT3G15510 41.667 216 101 5 13 211 21 228 5.02e-48 166
MsG0480019602.01.T01 AT5G46590 50.955 157 71 3 9 160 6 161 5.40e-48 164
MsG0480019602.01.T01 AT4G17980 50.641 156 69 3 9 157 6 160 1.19e-47 162
MsG0480019602.01.T01 AT1G33060 51.299 154 69 3 8 157 23 174 1.25e-47 171
MsG0480019602.01.T01 AT1G33060 51.299 154 69 3 8 157 23 174 1.33e-47 171
MsG0480019602.01.T01 AT2G33480 51.656 151 66 2 9 158 15 159 1.60e-47 162
MsG0480019602.01.T01 AT4G35580 51.634 153 68 3 9 157 9 159 2.61e-47 167
MsG0480019602.01.T01 AT4G35580 51.634 153 68 3 9 157 9 159 3.23e-47 168
MsG0480019602.01.T01 AT4G35580 51.634 153 68 3 9 157 9 159 3.28e-47 168
MsG0480019602.01.T01 AT5G39820 44.944 178 67 4 9 159 20 193 3.89e-47 163
MsG0480019602.01.T01 AT4G17980 50.641 156 69 3 9 157 6 160 4.02e-47 162
MsG0480019602.01.T01 AT1G26870 37.050 278 138 8 11 268 18 278 6.56e-47 164
MsG0480019602.01.T01 AT5G46590 55.970 134 57 2 9 141 6 138 1.10e-46 160
MsG0480019602.01.T01 AT2G33480 50.327 153 67 2 9 158 15 161 1.30e-46 159
MsG0480019602.01.T01 AT3G49530 45.810 179 92 4 5 179 9 186 2.70e-46 162
MsG0480019602.01.T01 AT3G49530 45.810 179 92 4 5 179 9 186 5.72e-46 163
MsG0480019602.01.T01 AT2G27300 39.303 201 112 4 2 202 7 197 1.30e-45 159
MsG0480019602.01.T01 AT5G13180 50.000 156 64 4 9 158 14 161 4.16e-45 155
MsG0480019602.01.T01 AT5G64060 47.097 155 78 2 9 160 6 159 2.20e-44 156
MsG0480019602.01.T01 AT2G02450 47.682 151 74 3 9 157 51 198 2.44e-44 157
MsG0480019602.01.T01 AT2G02450 47.682 151 74 3 9 157 51 198 3.32e-44 157
MsG0480019602.01.T01 AT2G43000 46.358 151 74 3 11 157 20 167 9.76e-44 152
MsG0480019602.01.T01 AT1G52880 50.307 163 61 4 13 159 21 179 1.97e-43 153
MsG0480019602.01.T01 AT1G32510 42.347 196 98 5 9 191 6 199 1.31e-42 149
MsG0480019602.01.T01 AT1G34190 44.667 150 79 2 11 157 18 166 4.82e-42 154
MsG0480019602.01.T01 AT1G34180 43.333 150 81 2 11 157 18 166 3.35e-41 150
MsG0480019602.01.T01 AT2G17040 40.625 192 103 5 11 196 8 194 4.33e-41 145
MsG0480019602.01.T01 AT5G22290 44.937 158 80 3 1 158 15 165 8.54e-41 146
MsG0480019602.01.T01 AT1G34180 43.333 150 81 2 11 157 18 166 9.80e-41 150
MsG0480019602.01.T01 AT5G09330 47.368 152 72 3 11 157 8 156 1.18e-40 149
MsG0480019602.01.T01 AT5G09330 47.368 152 72 3 11 157 8 156 1.18e-40 149
MsG0480019602.01.T01 AT5G09330 47.368 152 72 3 11 157 8 156 1.18e-40 149
MsG0480019602.01.T01 AT5G09330 47.368 152 72 3 11 157 8 156 1.18e-40 149
MsG0480019602.01.T01 AT5G09330 47.368 152 72 3 11 157 8 156 1.18e-40 149
MsG0480019602.01.T01 AT1G34180 40.994 161 81 3 11 157 18 178 5.75e-40 147
MsG0480019602.01.T01 AT3G44290 41.566 166 85 4 11 176 16 169 9.89e-40 140
MsG0480019602.01.T01 AT1G34180 40.994 161 81 3 11 157 18 178 1.57e-39 147
MsG0480019602.01.T01 AT5G61430 40.708 226 101 9 65 270 6 218 2.16e-39 141
MsG0480019602.01.T01 AT3G44290 41.566 166 85 4 11 176 16 169 6.77e-39 141
MsG0480019602.01.T01 AT1G32870 46.626 163 75 4 2 157 3 160 2.51e-38 143
MsG0480019602.01.T01 AT1G32870 46.626 163 75 4 2 157 3 160 2.51e-38 144
MsG0480019602.01.T01 AT1G32870 46.626 163 75 4 2 157 39 196 5.29e-38 143
MsG0480019602.01.T01 AT5G04395 43.275 171 79 4 3 160 22 187 7.56e-38 134
MsG0480019602.01.T01 AT3G12910 43.713 167 70 5 11 157 23 185 3.14e-37 136
MsG0480019602.01.T01 AT1G56010 58.763 97 34 1 67 157 8 104 4.40e-35 129
MsG0480019602.01.T01 AT3G12977 54.630 108 42 3 54 157 10 114 1.57e-34 127
MsG0480019602.01.T01 AT2G18060 74.286 70 17 1 90 158 2 71 5.91e-30 116
MsG0480019602.01.T01 AT2G33480 50.000 102 48 1 60 158 3 104 4.11e-28 109
MsG0480019602.01.T01 AT1G02230 39.196 199 98 8 10 194 4 193 1.38e-26 108
MsG0480019602.01.T01 AT4G01550 36.158 177 104 5 12 184 7 178 4.78e-26 108
MsG0480019602.01.T01 AT4G01520 37.654 162 93 5 10 166 5 163 7.08e-26 105
MsG0480019602.01.T01 AT4G01540 38.125 160 91 5 12 166 7 163 1.06e-24 103
MsG0480019602.01.T01 AT4G01540 38.125 160 91 5 12 166 7 163 1.30e-24 104
MsG0480019602.01.T01 AT4G01540 38.125 160 91 5 12 166 7 163 1.69e-24 103
MsG0480019602.01.T01 AT4G28530 36.145 166 49 5 9 157 10 135 1.85e-24 102
MsG0480019602.01.T01 AT4G01540 38.125 160 91 5 12 166 7 163 2.10e-24 103
MsG0480019602.01.T01 AT5G64530 36.310 168 73 6 9 157 3 155 3.56e-24 98.2
MsG0480019602.01.T01 AT5G64530 42.105 133 60 5 9 139 3 120 1.31e-23 95.9
MsG0480019602.01.T01 AT1G02250 34.762 210 120 11 10 211 4 204 6.96e-23 98.6
MsG0480019602.01.T01 AT3G10490 53.750 80 33 1 85 160 2 81 2.27e-22 97.1
MsG0480019602.01.T01 AT3G10490 53.750 80 33 1 85 160 2 81 2.27e-22 97.1
MsG0480019602.01.T01 AT3G04420 36.025 161 88 5 10 163 4 156 5.16e-22 94.7
MsG0480019602.01.T01 AT3G04420 36.025 161 88 5 10 163 4 156 7.49e-22 95.5
MsG0480019602.01.T01 AT3G44350 33.974 156 90 5 12 157 8 160 9.08e-22 93.2
MsG0480019602.01.T01 AT5G22380 35.897 156 91 4 9 155 5 160 9.46e-22 92.8
MsG0480019602.01.T01 AT3G44350 38.931 131 71 5 12 136 8 135 9.76e-21 88.2
MsG0480019602.01.T01 AT1G01010 34.641 153 85 6 12 154 6 153 3.56e-19 88.6
MsG0480019602.01.T01 AT2G43000 44.318 88 45 2 74 157 2 89 1.77e-18 82.8
MsG0480019602.01.T01 AT5G50820 36.301 146 68 6 1 137 9 138 2.87e-18 82.4
MsG0480019602.01.T01 AT1G02220 38.519 135 65 5 9 135 3 127 2.90e-18 85.5
MsG0480019602.01.T01 AT3G56530 29.747 158 106 3 1 155 44 199 1.80e-16 79.7
MsG0480019602.01.T01 AT5G22290 47.059 68 33 1 91 158 2 66 3.82e-15 74.7
MsG0480019602.01.T01 AT3G55210 28.834 163 94 5 9 155 11 167 4.13e-15 75.1
MsG0480019602.01.T01 AT5G14000 30.573 157 100 3 6 158 10 161 5.91e-15 73.2
MsG0480019602.01.T01 AT5G14000 32.353 136 83 3 6 137 10 140 9.88e-14 68.6
MsG0480019602.01.T01 AT3G04430 35.075 134 70 6 15 135 6 135 3.25e-11 62.4

Find 92 sgRNAs with CRISPR-Local

Find 206 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGGAATACTTACAAGAAAAT+TGG 0.239923 4:+23145741 MsG0480019602.01.T01:CDS
ATAAGTTGTTTCACTATAAT+AGG 0.269347 4:-23146795 None:intergenic
GTCCTTTCAGAAATTTGATA+TGG 0.292054 4:+23144068 MsG0480019602.01.T01:CDS
GAGCAACAAATGCAGGGTTT+TGG 0.295401 4:+23145691 MsG0480019602.01.T01:CDS
AGGTATCAAGTTTCAGAATC+TGG 0.305736 4:+23146858 MsG0480019602.01.T01:CDS
TTCTAATGGCGGTGTGCCAC+CGG 0.345325 4:+23143987 MsG0480019602.01.T01:CDS
AAGATGGATGGGTGGTATGC+AGG 0.347766 4:+23146457 MsG0480019602.01.T01:CDS
CTTCACTCCCAATCTTGAAT+AGG 0.355765 4:-23146497 None:intergenic
TTGTGAACCACCTCAAGAAA+TGG 0.360627 4:+23146896 MsG0480019602.01.T01:CDS
CAGGAAGAGACAAGTGCATT+AGG 0.383725 4:+23145721 MsG0480019602.01.T01:CDS
TATTAGTCCTTGACCCTGTT+GGG 0.386089 4:-23145668 None:intergenic
TGAAAGTTGATTGATTTGAT+TGG 0.387094 4:-23147021 None:intergenic
GTTGAGGCTGGGGTTGGGAG+TGG 0.389288 4:-23146719 None:intergenic
TAGAGGTTGAGGCTGGGGTT+GGG 0.397901 4:-23146724 None:intergenic
GTAGAGGTTGAGGCTGGGGT+TGG 0.413911 4:-23146725 None:intergenic
CTATTAGTCCTTGACCCTGT+TGG 0.415287 4:-23145669 None:intergenic
CTCATGGACAAAAGACTGAT+TGG 0.417162 4:+23145802 MsG0480019602.01.T01:CDS
GCCTGTAGAGGTTGAGGCTG+GGG 0.418162 4:-23146729 None:intergenic
TCTAATGGCGGTGTGCCACC+GGG 0.432129 4:+23143988 MsG0480019602.01.T01:CDS
GAAAGTTGATTGATTTGATT+GGG 0.434942 4:-23147020 None:intergenic
ACTAATAGAGCAACAAATGC+AGG 0.444998 4:+23145684 MsG0480019602.01.T01:CDS
AAGGACAGAAAGTACCCAAC+AGG 0.454734 4:+23145654 MsG0480019602.01.T01:CDS
GAGGAAATATTGTTCATTTG+TGG 0.454849 4:-23146543 None:intergenic
AAAAGAGGCTACAAGGTTAG+AGG 0.457059 4:+23146989 MsG0480019602.01.T01:CDS
TAGAGTATGAGTTCTTCTAA+TGG 0.457341 4:+23143973 None:intergenic
TCAGAATCTGGCATTGAAGT+TGG 0.458946 4:+23146870 MsG0480019602.01.T01:CDS
ATGAATGGGGAATGCTTGAT+AGG 0.460214 4:+23146946 MsG0480019602.01.T01:CDS
AATCAATCAACTTTCATTGA+GGG 0.472450 4:+23147028 MsG0480019602.01.T01:CDS
CTTGAACAAGATGGAACCTT+GGG 0.472651 4:+23144110 MsG0480019602.01.T01:CDS
ACCCCAGCCTCAACCTCTAC+AGG 0.478031 4:+23146728 MsG0480019602.01.T01:CDS
AGATGGATGGGTGGTATGCA+GGG 0.480498 4:+23146458 MsG0480019602.01.T01:CDS
TAGCCTGTAGAGGTTGAGGC+TGG 0.482716 4:-23146731 None:intergenic
GTGGTGAAGGAATGAATGAA+TGG 0.483190 4:+23146931 MsG0480019602.01.T01:CDS
AGCCTGTAGAGGTTGAGGCT+GGG 0.491178 4:-23146730 None:intergenic
AAATCAATCAACTTTCATTG+AGG 0.491406 4:+23147027 MsG0480019602.01.T01:CDS
TGTGAACCACCTCAAGAAAT+GGG 0.493376 4:+23146897 MsG0480019602.01.T01:CDS
TGGTGAAGGAATGAATGAAT+GGG 0.502961 4:+23146932 MsG0480019602.01.T01:CDS
CATGAATACCGTCTTGAAGA+TGG 0.503674 4:+23145831 MsG0480019602.01.T01:CDS
ACTTTCATTGAGGGGAGAGA+TGG 0.507244 4:+23147037 MsG0480019602.01.T01:CDS
TTTCGAGCTCGAAACCGGAT+AGG 0.515112 4:-23146641 None:intergenic
CCTACACCCATTTCTTGAGG+TGG 0.516209 4:-23146903 None:intergenic
CTTCCTACACCCATTTCTTG+AGG 0.516910 4:-23146906 None:intergenic
GAAATGTATTTGTAGGAAGA+TGG 0.518859 4:+23146441 MsG0480019602.01.T01:intron
TTGTGGATCTTGATTGTGTG+TGG 0.525676 4:-23146526 None:intergenic
CGAAACCGGATAGGTTCCTA+TGG 0.529928 4:-23146632 None:intergenic
AAGTTAGCCTGTAGAGGTTG+AGG 0.533705 4:-23146735 None:intergenic
GAAGGACCGTTGATTTGTTG+AGG 0.537902 4:-23146562 None:intergenic
CTACCACTCTCACAATCTCT+AGG 0.544505 4:-23146825 None:intergenic
AAAGAGATGCATACATTGGT+AGG 0.547128 4:-23145861 None:intergenic
ATAGGTTGTTCTGTCTGTAA+AGG 0.547458 4:-23146777 None:intergenic
ACTCCACAAAAGAGGCTACA+AGG 0.548832 4:+23146982 MsG0480019602.01.T01:CDS
GAATGATGACTCCACAAAAG+AGG 0.551407 4:+23146974 MsG0480019602.01.T01:CDS
TTCAAGATTGGGAGTGAAGG+TGG 0.552771 4:+23146501 MsG0480019602.01.T01:CDS
TTGATAATGGAGACTAAGCT+CGG 0.553649 4:-23146667 None:intergenic
ATCAATCAACTTTCATTGAG+GGG 0.554173 4:+23147029 MsG0480019602.01.T01:CDS
TGTATTTGTAGGAAGATGGA+TGG 0.554275 4:+23146445 MsG0480019602.01.T01:intron
GGTGTAGGAAGGAGTGGTGA+AGG 0.561219 4:+23146918 MsG0480019602.01.T01:CDS
AACCACCATAGGAACCTATC+CGG 0.566236 4:+23146627 MsG0480019602.01.T01:CDS
TGATATGGATGTTATAAGAG+AGG 0.567950 4:+23144083 MsG0480019602.01.T01:CDS
ATCCATATCAAATTTCTGAA+AGG 0.570548 4:-23144070 None:intergenic
CTCAAGAAATGGGTGTAGGA+AGG 0.571055 4:+23146907 MsG0480019602.01.T01:CDS
GAAATGGGTGTAGGAAGGAG+TGG 0.573489 4:+23146912 MsG0480019602.01.T01:CDS
TGAAGTAACTCTTCATCAGT+CGG 0.581155 4:-23144024 None:intergenic
AGAGGTGGACTTGAACAAGA+TGG 0.584582 4:+23144101 MsG0480019602.01.T01:CDS
AATCCTAGAGATTGTGAGAG+TGG 0.585606 4:+23146822 MsG0480019602.01.T01:CDS
GATTGTGAGAGTGGTAGTGA+TGG 0.586886 4:+23146831 MsG0480019602.01.T01:CDS
TACAAAGGCAGAGCTCCTCA+TGG 0.591624 4:+23145786 MsG0480019602.01.T01:CDS
ACTTGAACAAGATGGAACCT+TGG 0.595484 4:+23144109 MsG0480019602.01.T01:CDS
CTATTCAAGATTGGGAGTGA+AGG 0.598153 4:+23146498 MsG0480019602.01.T01:CDS
AACAACATCAAAACCACCAT+AGG 0.601748 4:+23146616 MsG0480019602.01.T01:CDS
TAATCAAAGTTAGCCTGTAG+AGG 0.606992 4:-23146741 None:intergenic
AAGACTCTTGTGTTCTACAA+AGG 0.611421 4:+23145771 MsG0480019602.01.T01:CDS
ATGGAACCTTGGGACTTGCA+AGG 0.612104 4:+23144120 MsG0480019602.01.T01:CDS
GAAAGTACCCAACAGGGTCA+AGG 0.612193 4:+23145661 MsG0480019602.01.T01:CDS
TGATAATGGAGACTAAGCTC+GGG 0.612739 4:-23146666 None:intergenic
CCACCTCAAGAAATGGGTGT+AGG 0.613141 4:+23146903 MsG0480019602.01.T01:CDS
TATGGATGTTATAAGAGAGG+TGG 0.621522 4:+23144086 MsG0480019602.01.T01:CDS
CTAATAGAGCAACAAATGCA+GGG 0.623645 4:+23145685 MsG0480019602.01.T01:CDS
AGAGTGGTAGTGATGGTTTG+AGG 0.624748 4:+23146838 MsG0480019602.01.T01:CDS
AACCGGATAGGTTCCTATGG+TGG 0.626386 4:-23146629 None:intergenic
GTCGGATGAAATCGAAACCC+CGG 0.631890 4:-23144006 None:intergenic
GTATTTGTAGGAAGATGGAT+GGG 0.647842 4:+23146446 MsG0480019602.01.T01:intron
GATCATTGCCATCTTCAAGA+CGG 0.649154 4:-23145839 None:intergenic
ATATTTCCTCAACAAATCAA+CGG 0.660597 4:+23146556 MsG0480019602.01.T01:CDS
GTGGTATTTCTTCAGTCACA+AGG 0.667084 4:+23145635 MsG0480019602.01.T01:CDS
AGTATGAGTTCTTCTAATGG+CGG 0.674587 4:+23143976 MsG0480019602.01.T01:CDS
CTAATGGCGGTGTGCCACCG+GGG 0.679366 4:+23143989 MsG0480019602.01.T01:CDS
TTTGTAGGAAGATGGATGGG+TGG 0.681897 4:+23146449 MsG0480019602.01.T01:intron
GGTGAAGGAATGAATGAATG+GGG 0.696621 4:+23146933 MsG0480019602.01.T01:CDS
GATCGACACCACAAAACGAG+TGG 0.701290 4:+23145616 MsG0480019602.01.T01:CDS
AGGACAGAAAGTACCCAACA+GGG 0.718761 4:+23145655 MsG0480019602.01.T01:CDS
GGATGAAATCGAAACCCCGG+TGG 0.755662 4:-23144003 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTTTCTTTATTTTGAAT+GGG - Chr4:23145427-23145446 None:intergenic 10.0%
!! TATTAATGAAATGTATTTGT+AGG + Chr4:23146434-23146453 MsG0480019602.01.T01:intron 15.0%
!! TCATTATTATTTGAAAAAGA+AGG + Chr4:23144044-23144063 MsG0480019602.01.T01:CDS 15.0%
!!! ACTCATTTTTGTTTATATTT+TGG + Chr4:23145993-23146012 MsG0480019602.01.T01:intron 15.0%
!!! ATTTAAAATTTGTTACAACT+TGG - Chr4:23146095-23146114 None:intergenic 15.0%
!!! CTAATTTTTGCTTATATTTT+TGG - Chr4:23145915-23145934 None:intergenic 15.0%
!!! CTCATTTTTGTTTATATTTT+GGG + Chr4:23145994-23146013 MsG0480019602.01.T01:intron 15.0%
!!! GTTTTTTTCTTTATTTTGAA+TGG - Chr4:23145428-23145447 None:intergenic 15.0%
!!! TTTAAAATTTGTTACAACTT+GGG - Chr4:23146094-23146113 None:intergenic 15.0%
!! AAATATTATCATGAAGAGTT+TGG + Chr4:23145250-23145269 MsG0480019602.01.T01:intron 20.0%
!! AATTGTGGATGAATTTAATA+TGG - Chr4:23145229-23145248 None:intergenic 20.0%
!! CACTAAAAAAAAAACATGAA+AGG - Chr4:23144442-23144461 None:intergenic 20.0%
!! CAGATAAACACAATAATATA+TGG - Chr4:23144331-23144350 None:intergenic 20.0%
!! GAAAATAATAGAATATGAGT+TGG - Chr4:23144669-23144688 None:intergenic 20.0%
!! TAAAAAAGGAAATAGATGTA+AGG - Chr4:23145143-23145162 None:intergenic 20.0%
!! TATCTGTATCCAAATTTAAT+TGG + Chr4:23144345-23144364 MsG0480019602.01.T01:intron 20.0%
!! TCACATTAGATAAAACATTT+AGG - Chr4:23145068-23145087 None:intergenic 20.0%
!! TCATGATAATATTTCAATTG+TGG - Chr4:23145244-23145263 None:intergenic 20.0%
!! TGACAAAAGTTACAATTTAT+GGG - Chr4:23146187-23146206 None:intergenic 20.0%
!! TTAAACTAATGTAATCGATT+TGG - Chr4:23144898-23144879 None:intergenic 20.0%
!! TTAGTAAACACTACAAATTA+TGG - Chr4:23145555-23145574 None:intergenic 20.0%
!! TTGACAAAAGTTACAATTTA+TGG - Chr4:23146188-23146207 None:intergenic 20.0%
!! TTTATCTAATGTGAACAAAA+GGG + Chr4:23145074-23145093 MsG0480019602.01.T01:intron 20.0%
!!! ATAAGTTGTTTCACTATAAT+AGG - Chr4:23146798-23146817 None:intergenic 20.0%
!!! ATACATTATGTTTAAGTTTC+TGG + Chr4:23145529-23145548 MsG0480019602.01.T01:intron 20.0%
!!! CTTATTTAACTTTAGTGTTT+GGG + Chr4:23144158-23144177 MsG0480019602.01.T01:intron 20.0%
!!! CTTTCATGTTTTTTTTTTAG+TGG + Chr4:23144440-23144459 MsG0480019602.01.T01:intron 20.0%
!!! TCTTATTTAACTTTAGTGTT+TGG + Chr4:23144157-23144176 MsG0480019602.01.T01:intron 20.0%
!!! TTTCTTTTTTGACAAAGTTT+GGG - Chr4:23144760-23144779 None:intergenic 20.0%
!!! TTTTATCTAATGTGAACAAA+AGG + Chr4:23145073-23145092 MsG0480019602.01.T01:intron 20.0%
!!! TTTTCTTTTTTGACAAAGTT+TGG - Chr4:23144761-23144780 None:intergenic 20.0%
!!! TTTTTGCTTATATTTTTGGA+CGG - Chr4:23145911-23145930 None:intergenic 20.0%
!!! TTTTTGTTTATATTTTGGGA+CGG + Chr4:23145998-23146017 MsG0480019602.01.T01:intron 20.0%
! AAATCAATCAACTTTCATTG+AGG + Chr4:23147027-23147046 MsG0480019602.01.T01:CDS 25.0%
! AAGAAAAACCTATTCAAGAT+TGG + Chr4:23146489-23146508 MsG0480019602.01.T01:CDS 25.0%
! AATCAATCAACTTTCATTGA+GGG + Chr4:23147028-23147047 MsG0480019602.01.T01:CDS 25.0%
! ACAAAAGTTACAATTTATGG+GGG - Chr4:23146185-23146204 None:intergenic 25.0%
! AGAAAAACCTATTCAAGATT+GGG + Chr4:23146490-23146509 MsG0480019602.01.T01:CDS 25.0%
! AGGAATACTTACAAGAAAAT+TGG + Chr4:23145741-23145760 MsG0480019602.01.T01:CDS 25.0%
! ATATTTCCTCAACAAATCAA+CGG + Chr4:23146556-23146575 MsG0480019602.01.T01:CDS 25.0%
! ATCCATATCAAATTTCTGAA+AGG - Chr4:23144073-23144092 None:intergenic 25.0%
! ATGCATAAAATATGTATGTC+TGG - Chr4:23144480-23144499 None:intergenic 25.0%
! CACACTACATGTATATAAAA+GGG + Chr4:23144259-23144278 MsG0480019602.01.T01:intron 25.0%
! GACAAAAGTTACAATTTATG+GGG - Chr4:23146186-23146205 None:intergenic 25.0%
! GTATCCAAATTTAATTGGTT+AGG + Chr4:23144350-23144369 MsG0480019602.01.T01:intron 25.0%
! TCACACTACATGTATATAAA+AGG + Chr4:23144258-23144277 MsG0480019602.01.T01:intron 25.0%
! TCATCCTAACCAATTAAATT+TGG - Chr4:23144357-23144376 None:intergenic 25.0%
! TGCATAAAATATGTATGTCT+GGG - Chr4:23144479-23144498 None:intergenic 25.0%
!! ATTTTTGTATCTCAAAACGT+TGG + Chr4:23144819-23144838 MsG0480019602.01.T01:intron 25.0%
!! GGTGAAGTATTTAACATATA+CGG - Chr4:23145889-23145908 None:intergenic 25.0%
!! TGATAGATGTTTGACAATTT+TGG - Chr4:23146248-23146267 None:intergenic 25.0%
!!! GAAAGTTGATTGATTTGATT+GGG - Chr4:23147023-23147042 None:intergenic 25.0%
!!! TGAAAGTTGATTGATTTGAT+TGG - Chr4:23147024-23147043 None:intergenic 25.0%
!!! TTTTAATTGTAAGAGACCTA+AGG - Chr4:23144588-23144607 None:intergenic 25.0%
!!! TTTTGCTTATATTTTTGGAC+GGG - Chr4:23145910-23145929 None:intergenic 25.0%
AGTGTCAAATAGGCAATTAA+CGG - Chr4:23146314-23146333 None:intergenic 30.0%
ATCAATCAACTTTCATTGAG+GGG + Chr4:23147029-23147048 MsG0480019602.01.T01:CDS 30.0%
ATGGAGGAAATTAACGAATA+GGG - Chr4:23146275-23146294 None:intergenic 30.0%
CAGTTATTACAAAGCATGAA+AGG - Chr4:23144538-23144557 None:intergenic 30.0%
CTACGAACTCCTTTATAATT+TGG + Chr4:23145447-23145466 MsG0480019602.01.T01:intron 30.0%
GAAATGTATTTGTAGGAAGA+TGG + Chr4:23146441-23146460 MsG0480019602.01.T01:intron 30.0%
GAGGAAATATTGTTCATTTG+TGG - Chr4:23146546-23146565 None:intergenic 30.0%
GATGTAGGACCAAATTATAA+AGG - Chr4:23145459-23145478 None:intergenic 30.0%
GCATAAAATATGTATGTCTG+GGG - Chr4:23144478-23144497 None:intergenic 30.0%
GTCCTTTCAGAAATTTGATA+TGG + Chr4:23144068-23144087 MsG0480019602.01.T01:CDS 30.0%
TATCTTGTCATCTTAACCTT+GGG - Chr4:23144561-23144580 None:intergenic 30.0%
TGATATGGATGTTATAAGAG+AGG + Chr4:23144083-23144102 MsG0480019602.01.T01:CDS 30.0%
TGCACAGAAAAATGTAAGAT+TGG + Chr4:23145594-23145613 MsG0480019602.01.T01:intron 30.0%
TTATCTTGTCATCTTAACCT+TGG - Chr4:23144562-23144581 None:intergenic 30.0%
TTATTTATGCTAGTCGATGT+AGG - Chr4:23145474-23145493 None:intergenic 30.0%
TTGAAAGTTTGGTAGGAAAA+GGG - Chr4:23145039-23145058 None:intergenic 30.0%
TTGTTATGACAGTGCATAAA+AGG - Chr4:23144412-23144431 None:intergenic 30.0%
TTTGAAAGTTTGGTAGGAAA+AGG - Chr4:23145040-23145059 None:intergenic 30.0%
! ACCTCTGAAAAAGTTTCAAA+AGG - Chr4:23145206-23145225 None:intergenic 30.0%
! TAAGTTTTGCGAAATTCAAC+AGG - Chr4:23146215-23146234 None:intergenic 30.0%
! TTGATTTTCTCTTTGCATGA+AGG - Chr4:23146583-23146602 None:intergenic 30.0%
!!! ACCTTTTGAAACTTTTTCAG+AGG + Chr4:23145202-23145221 MsG0480019602.01.T01:intron 30.0%
!!! AGTTTTGCAAGTGTTGATAA+TGG - Chr4:23146683-23146702 None:intergenic 30.0%
!!! ATGTTTTTTTTTTAGTGGCC+GGG + Chr4:23144445-23144464 MsG0480019602.01.T01:intron 30.0%
!!! CATGTTTTTTTTTTAGTGGC+CGG + Chr4:23144444-23144463 MsG0480019602.01.T01:intron 30.0%
AAAAGTCATGCCACATCATA+GGG + Chr4:23146347-23146366 MsG0480019602.01.T01:intron 35.0%
AAAGAGATGCATACATTGGT+AGG - Chr4:23145864-23145883 None:intergenic 35.0%
AACAACATCAAAACCACCAT+AGG + Chr4:23146616-23146635 MsG0480019602.01.T01:CDS 35.0%
AAGACTCTTGTGTTCTACAA+AGG + Chr4:23145771-23145790 MsG0480019602.01.T01:CDS 35.0%
ACTAATAGAGCAACAAATGC+AGG + Chr4:23145684-23145703 MsG0480019602.01.T01:CDS 35.0%
ACTTCTGTATCTCAAAACGT+TGG - Chr4:23144853-23144872 None:intergenic 35.0%
AGGTATCAAGTTTCAGAATC+TGG + Chr4:23146858-23146877 MsG0480019602.01.T01:CDS 35.0%
AGTATGAGTTCTTCTAATGG+CGG + Chr4:23143976-23143995 MsG0480019602.01.T01:CDS 35.0%
ATAGGTTGTTCTGTCTGTAA+AGG - Chr4:23146780-23146799 None:intergenic 35.0%
CTAATAGAGCAACAAATGCA+GGG + Chr4:23145685-23145704 MsG0480019602.01.T01:CDS 35.0%
GATGACAAGATAATTGCCTT+AGG + Chr4:23144569-23144588 MsG0480019602.01.T01:intron 35.0%
GATGGAGGAAATTAACGAAT+AGG - Chr4:23146276-23146295 None:intergenic 35.0%
GCAAATTCAAGATGTACGAA+AGG - Chr4:23145381-23145400 None:intergenic 35.0%
GTATTTGTAGGAAGATGGAT+GGG + Chr4:23146446-23146465 MsG0480019602.01.T01:intron 35.0%
GTCTTGAGCTTTCATAGTTA+GGG + Chr4:23145302-23145321 MsG0480019602.01.T01:intron 35.0%
TATGGATGTTATAAGAGAGG+TGG + Chr4:23144086-23144105 MsG0480019602.01.T01:CDS 35.0%
TGAAGTAACTCTTCATCAGT+CGG - Chr4:23144027-23144046 None:intergenic 35.0%
TGGTGAAGGAATGAATGAAT+GGG + Chr4:23146932-23146951 MsG0480019602.01.T01:CDS 35.0%
TGTATTTGTAGGAAGATGGA+TGG + Chr4:23146445-23146464 MsG0480019602.01.T01:intron 35.0%
TGTCTTGAGCTTTCATAGTT+AGG + Chr4:23145301-23145320 MsG0480019602.01.T01:intron 35.0%
TTAGGCTCTGTTTGAAAGTT+TGG - Chr4:23145050-23145069 None:intergenic 35.0%
TTATGACAGTGCATAAAAGG+AGG - Chr4:23144409-23144428 None:intergenic 35.0%
! AAGAAATACCACTCGTTTTG+TGG - Chr4:23145627-23145646 None:intergenic 35.0%
! TAATCAAAGTTAGCCTGTAG+AGG - Chr4:23146744-23146763 None:intergenic 35.0%
! TCGTACATCTTGAATTTGCT+TGG + Chr4:23145382-23145401 MsG0480019602.01.T01:intron 35.0%
!! TATCATGAAGAGTTTGGTGT+TGG + Chr4:23145256-23145275 MsG0480019602.01.T01:intron 35.0%
!! TTGATAATGGAGACTAAGCT+CGG - Chr4:23146670-23146689 None:intergenic 35.0%
!!! TGTTTTTTTTTTAGTGGCCG+GGG + Chr4:23144446-23144465 MsG0480019602.01.T01:intron 35.0%
AAAAGAGGCTACAAGGTTAG+AGG + Chr4:23146989-23147008 MsG0480019602.01.T01:CDS 40.0%
AAAGTCATGCCACATCATAG+GGG + Chr4:23146348-23146367 MsG0480019602.01.T01:intron 40.0%
AAAGTTTGGTAGGAAAAGGG+AGG - Chr4:23145036-23145055 None:intergenic 40.0%
AAGTTTGGTAGGAAAAGGGA+GGG - Chr4:23145035-23145054 None:intergenic 40.0%
AATCCTAGAGATTGTGAGAG+TGG + Chr4:23146822-23146841 MsG0480019602.01.T01:CDS 40.0%
ACTTGAACAAGATGGAACCT+TGG + Chr4:23144109-23144128 MsG0480019602.01.T01:CDS 40.0%
AGTCAATAACCCCTATGATG+TGG - Chr4:23146360-23146379 None:intergenic 40.0%
ATGAATGGGGAATGCTTGAT+AGG + Chr4:23146946-23146965 MsG0480019602.01.T01:CDS 40.0%
CATGAATACCGTCTTGAAGA+TGG + Chr4:23145831-23145850 MsG0480019602.01.T01:CDS 40.0%
CTATTCAAGATTGGGAGTGA+AGG + Chr4:23146498-23146517 MsG0480019602.01.T01:CDS 40.0%
CTCATGGACAAAAGACTGAT+TGG + Chr4:23145802-23145821 MsG0480019602.01.T01:CDS 40.0%
CTTCACTCCCAATCTTGAAT+AGG - Chr4:23146500-23146519 None:intergenic 40.0%
CTTGAACAAGATGGAACCTT+GGG + Chr4:23144110-23144129 MsG0480019602.01.T01:CDS 40.0%
GAAAAGTCATGCCACATCAT+AGG + Chr4:23146346-23146365 MsG0480019602.01.T01:intron 40.0%
GAATGATGACTCCACAAAAG+AGG + Chr4:23146974-23146993 MsG0480019602.01.T01:CDS 40.0%
GATCATTGCCATCTTCAAGA+CGG - Chr4:23145842-23145861 None:intergenic 40.0%
GCAACTCTACAAAATTACGC+AGG - Chr4:23145333-23145352 None:intergenic 40.0%
GCTCTGTTTGAAAGTTTGGT+AGG - Chr4:23145046-23145065 None:intergenic 40.0%
GGAGAAAGAGATGCATACAT+TGG - Chr4:23145868-23145887 None:intergenic 40.0%
GGTGAAGGAATGAATGAATG+GGG + Chr4:23146933-23146952 MsG0480019602.01.T01:CDS 40.0%
GTGGTATTTCTTCAGTCACA+AGG + Chr4:23145635-23145654 MsG0480019602.01.T01:CDS 40.0%
GTGGTGAAGGAATGAATGAA+TGG + Chr4:23146931-23146950 MsG0480019602.01.T01:CDS 40.0%
TATTAGTCCTTGACCCTGTT+GGG - Chr4:23145671-23145690 None:intergenic 40.0%
TGCTTTGTAATAACTGCCCA+AGG + Chr4:23144542-23144561 MsG0480019602.01.T01:intron 40.0%
TGTGAACCACCTCAAGAAAT+GGG + Chr4:23146897-23146916 MsG0480019602.01.T01:CDS 40.0%
TTGTGAACCACCTCAAGAAA+TGG + Chr4:23146896-23146915 MsG0480019602.01.T01:CDS 40.0%
TTGTGGATCTTGATTGTGTG+TGG - Chr4:23146529-23146548 None:intergenic 40.0%
TTTAGGAGGGATGAGATTAG+AGG - Chr4:23145007-23145026 None:intergenic 40.0%
TTTCGTGAGCATAACTCAGT+TGG - Chr4:23144511-23144530 None:intergenic 40.0%
! ATTTTACCTTGCAAGTCCCA+AGG - Chr4:23144129-23144148 None:intergenic 40.0%
! CAATCAGTCTTTTGTCCATG+AGG - Chr4:23145804-23145823 None:intergenic 40.0%
! TAACCTTGTAGCCTCTTTTG+TGG - Chr4:23146988-23147007 None:intergenic 40.0%
! TCAGAATCTGGCATTGAAGT+TGG + Chr4:23146870-23146889 MsG0480019602.01.T01:CDS 40.0%
! TGAGCATAACTCAGTTGGTA+AGG - Chr4:23144506-23144525 None:intergenic 40.0%
!! TGATAATGGAGACTAAGCTC+GGG - Chr4:23146669-23146688 None:intergenic 40.0%
!!! AGATGGATTTTTGGGGCTAT+GGG + Chr4:23147054-23147073 MsG0480019602.01.T01:CDS 40.0%
AACCACCATAGGAACCTATC+CGG + Chr4:23146627-23146646 MsG0480019602.01.T01:CDS 45.0%
ACCATGTGGCAGTGTCAAAT+AGG - Chr4:23146324-23146343 None:intergenic 45.0%
ACTCCACAAAAGAGGCTACA+AGG + Chr4:23146982-23147001 MsG0480019602.01.T01:CDS 45.0%
ACTTTCATTGAGGGGAGAGA+TGG + Chr4:23147037-23147056 MsG0480019602.01.T01:CDS 45.0%
AGTTTGGTAGGAAAAGGGAG+GGG - Chr4:23145034-23145053 None:intergenic 45.0%
CAGGAAGAGACAAGTGCATT+AGG + Chr4:23145721-23145740 MsG0480019602.01.T01:CDS 45.0%
CTACCACTCTCACAATCTCT+AGG - Chr4:23146828-23146847 None:intergenic 45.0%
CTATTAGTCCTTGACCCTGT+TGG - Chr4:23145672-23145691 None:intergenic 45.0%
CTCAAGAAATGGGTGTAGGA+AGG + Chr4:23146907-23146926 MsG0480019602.01.T01:CDS 45.0%
CTTCCTACACCCATTTCTTG+AGG - Chr4:23146909-23146928 None:intergenic 45.0%
TTCAAGATTGGGAGTGAAGG+TGG + Chr4:23146501-23146520 MsG0480019602.01.T01:CDS 45.0%
TTTGTAGGAAGATGGATGGG+TGG + Chr4:23146449-23146468 MsG0480019602.01.T01:intron 45.0%
! AAGTTAGCCTGTAGAGGTTG+AGG - Chr4:23146738-23146757 None:intergenic 45.0%
! AGAGGTGGACTTGAACAAGA+TGG + Chr4:23144101-23144120 MsG0480019602.01.T01:CDS 45.0%
! AGAGTGGTAGTGATGGTTTG+AGG + Chr4:23146838-23146857 MsG0480019602.01.T01:CDS 45.0%
! GAGCAACAAATGCAGGGTTT+TGG + Chr4:23145691-23145710 MsG0480019602.01.T01:CDS 45.0%
! GATTGTGAGAGTGGTAGTGA+TGG + Chr4:23146831-23146850 MsG0480019602.01.T01:CDS 45.0%
! GCATGACTTTTCTGACCATG+TGG - Chr4:23146338-23146357 None:intergenic 45.0%
!! AAGGACAGAAAGTACCCAAC+AGG + Chr4:23145654-23145673 MsG0480019602.01.T01:CDS 45.0%
!! AGGACAGAAAGTACCCAACA+GGG + Chr4:23145655-23145674 MsG0480019602.01.T01:CDS 45.0%
!! AGGGGAGAGATGGATTTTTG+GGG + Chr4:23147047-23147066 MsG0480019602.01.T01:CDS 45.0%
!! GAAGGACCGTTGATTTGTTG+AGG - Chr4:23146565-23146584 None:intergenic 45.0%
!! GAGGGGAGAGATGGATTTTT+GGG + Chr4:23147046-23147065 MsG0480019602.01.T01:CDS 45.0%
!! TGAGGGGAGAGATGGATTTT+TGG + Chr4:23147045-23147064 MsG0480019602.01.T01:CDS 45.0%
!!! GAGATGGATTTTTGGGGCTA+TGG + Chr4:23147053-23147072 MsG0480019602.01.T01:CDS 45.0%
!! TGAATTTATAATAATAAAAA+AGG - Chr4:23145157-23145176 None:intergenic 5.0%
!!! ATTAAAATATTTATTTTCAT+TGG - Chr4:23145499-23145518 None:intergenic 5.0%
AACCGGATAGGTTCCTATGG+TGG - Chr4:23146632-23146651 None:intergenic 50.0%
AAGATGGATGGGTGGTATGC+AGG + Chr4:23146457-23146476 MsG0480019602.01.T01:CDS 50.0%
AGATGGATGGGTGGTATGCA+GGG + Chr4:23146458-23146477 MsG0480019602.01.T01:CDS 50.0%
ATGGAACCTTGGGACTTGCA+AGG + Chr4:23144120-23144139 MsG0480019602.01.T01:CDS 50.0%
CCACCTCAAGAAATGGGTGT+AGG + Chr4:23146903-23146922 MsG0480019602.01.T01:CDS 50.0%
CCTACACCCATTTCTTGAGG+TGG - Chr4:23146906-23146925 None:intergenic 50.0%
CCTCCATCAACATGCTGATG+TGG + Chr4:23146288-23146307 MsG0480019602.01.T01:intron 50.0%
CGAAACCGGATAGGTTCCTA+TGG - Chr4:23146635-23146654 None:intergenic 50.0%
GAAAAGGGAGGGGAGAGTTT+AGG - Chr4:23145024-23145043 None:intergenic 50.0%
GAAATGGGTGTAGGAAGGAG+TGG + Chr4:23146912-23146931 MsG0480019602.01.T01:CDS 50.0%
GATCGACACCACAAAACGAG+TGG + Chr4:23145616-23145635 MsG0480019602.01.T01:CDS 50.0%
GCCTATTTGACACTGCCACA+TGG + Chr4:23146320-23146339 MsG0480019602.01.T01:intron 50.0%
GTCGGATGAAATCGAAACCC+CGG - Chr4:23144009-23144028 None:intergenic 50.0%
TACAAAGGCAGAGCTCCTCA+TGG + Chr4:23145786-23145805 MsG0480019602.01.T01:CDS 50.0%
TTTCGAGCTCGAAACCGGAT+AGG - Chr4:23146644-23146663 None:intergenic 50.0%
! CCACATCAGCATGTTGATGG+AGG - Chr4:23146291-23146310 None:intergenic 50.0%
! TATGTCTGGGGTTCAAACCC+CGG - Chr4:23144466-23144485 None:intergenic 50.0%
!! GAAAGTACCCAACAGGGTCA+AGG + Chr4:23145661-23145680 MsG0480019602.01.T01:CDS 50.0%
!!! GCAGGGTTTTGGAAAGCTAC+AGG + Chr4:23145702-23145721 MsG0480019602.01.T01:CDS 50.0%
AAGGGAGGGGAGAGTTTAGG+AGG - Chr4:23145021-23145040 None:intergenic 55.0%
AGCCTGTAGAGGTTGAGGCT+GGG - Chr4:23146733-23146752 None:intergenic 55.0%
AGGGAGGGGAGAGTTTAGGA+GGG - Chr4:23145020-23145039 None:intergenic 55.0%
CGGCCACATCAGCATGTTGA+TGG - Chr4:23146294-23146313 None:intergenic 55.0%
GGATGAAATCGAAACCCCGG+TGG - Chr4:23144006-23144025 None:intergenic 55.0%
GGTGTAGGAAGGAGTGGTGA+AGG + Chr4:23146918-23146937 MsG0480019602.01.T01:CDS 55.0%
TAGAGGTTGAGGCTGGGGTT+GGG - Chr4:23146727-23146746 None:intergenic 55.0%
TAGCCTGTAGAGGTTGAGGC+TGG - Chr4:23146734-23146753 None:intergenic 55.0%
TTCTAATGGCGGTGTGCCAC+CGG + Chr4:23143987-23144006 MsG0480019602.01.T01:CDS 55.0%
!! GGGCTTTTCGAGCTCGAAAC+CGG - Chr4:23146649-23146668 None:intergenic 55.0%
ACCCCAGCCTCAACCTCTAC+AGG + Chr4:23146728-23146747 MsG0480019602.01.T01:CDS 60.0%
GCCTGTAGAGGTTGAGGCTG+GGG - Chr4:23146732-23146751 None:intergenic 60.0%
GTAGAGGTTGAGGCTGGGGT+TGG - Chr4:23146728-23146747 None:intergenic 60.0%
TCTAATGGCGGTGTGCCACC+GGG + Chr4:23143988-23144007 MsG0480019602.01.T01:CDS 60.0%
CTAATGGCGGTGTGCCACCG+GGG + Chr4:23143989-23144008 MsG0480019602.01.T01:CDS 65.0%
GTTGAGGCTGGGGTTGGGAG+TGG - Chr4:23146722-23146741 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
Chr4 gene 23143976 23147085 23143976 ID=MsG0480019602.01;Name=MsG0480019602.01
Chr4 mRNA 23143976 23147085 23143976 ID=MsG0480019602.01.T01;Parent=MsG0480019602.01;Name=MsG0480019602.01.T01;_AED=0.05;_eAED=0.05;_QI=0|0|0|1|1|1|3|0|354
Chr4 exon 23143976 23144141 23143976 ID=MsG0480019602.01.T01:exon:5093;Parent=MsG0480019602.01.T01
Chr4 exon 23145601 23145869 23145601 ID=MsG0480019602.01.T01:exon:5094;Parent=MsG0480019602.01.T01
Chr4 exon 23146456 23147085 23146456 ID=MsG0480019602.01.T01:exon:5095;Parent=MsG0480019602.01.T01
Chr4 CDS 23143976 23144141 23143976 ID=MsG0480019602.01.T01:cds;Parent=MsG0480019602.01.T01
Chr4 CDS 23145601 23145869 23145601 ID=MsG0480019602.01.T01:cds;Parent=MsG0480019602.01.T01
Chr4 CDS 23146456 23147085 23146456 ID=MsG0480019602.01.T01:cds;Parent=MsG0480019602.01.T01
Gene Sequence

>MsG0480019602.01.T01

AGTATGAGTTCTTCTAATGGCGGTGTGCCACCGGGGTTTCGATTTCATCCGACTGATGAAGAGTTACTTCATTATTATTTGAAAAAGAAGGTGTCCTTTCAGAAATTTGATATGGATGTTATAAGAGAGGTGGACTTGAACAAGATGGAACCTTGGGACTTGCAAGAAAAATGTAAGATTGGATCGACACCACAAAACGAGTGGTATTTCTTCAGTCACAAGGACAGAAAGTACCCAACAGGGTCAAGGACTAATAGAGCAACAAATGCAGGGTTTTGGAAAGCTACAGGAAGAGACAAGTGCATTAGGAATACTTACAAGAAAATTGGAATGAGAAAGACTCTTGTGTTCTACAAAGGCAGAGCTCCTCATGGACAAAAGACTGATTGGATTATGCATGAATACCGTCTTGAAGATGGCAATGATCCTACCAATGAAGATGGATGGGTGGTATGCAGGGTGTTCAAGAAGAAAAACCTATTCAAGATTGGGAGTGAAGGTGGATCCACACACAATCAAGATCCACAAATGAACAATATTTCCTCAACAAATCAACGGTCCTTCATGCAAAGAGAAAATCAATACTTACTACATCAACAACATCAAAACCACCATAGGAACCTATCCGGTTTCGAGCTCGAAAAGCCCGAGCTTAGTCTCCATTATCAACACTTGCAAAACTCTCAATACTCAATCTTCCACTCCCAACCCCAGCCTCAACCTCTACAGGCTAACTTTGATTACTCATATGCATCACCTTTACAGACAGAACAACCTATTATAGTGAAACAACTTATGACAAATCCTAGAGATTGTGAGAGTGGTAGTGATGGTTTGAGGTATCAAGTTTCAGAATCTGGCATTGAAGTTGGCTCTTGTGAACCACCTCAAGAAATGGGTGTAGGAAGGAGTGGTGAAGGAATGAATGAATGGGGAATGCTTGATAGGCTTGTGAATGATGACTCCACAAAAGAGGCTACAAGGTTAGAGGATGCAAATCCCAATCAAATCAATCAACTTTCATTGAGGGGAGAGATGGATTTTTGGGGCTATGGGAAACAATGA
Protein sequence

>MsG0480019602.01.T01

SMSSSNGGVPPGFRFHPTDEELLHYYLKKKVSFQKFDMDVIREVDLNKMEPWDLQEKCKIGSTPQNEWYFFSHKDRKYPTGSRTNRATNAGFWKATGRDKCIRNTYKKIGMRKTLVFYKGRAPHGQKTDWIMHEYRLEDGNDPTNEDGWVVCRVFKKKNLFKIGSEGGSTHNQDPQMNNISSTNQRSFMQRENQYLLHQQHQNHHRNLSGFELEKPELSLHYQHLQNSQYSIFHSQPQPQPLQANFDYSYASPLQTEQPIIVKQLMTNPRDCESGSDGLRYQVSESGIEVGSCEPPQEMGVGRSGEGMNEWGMLDRLVNDDSTKEATRLEDANPNQINQLSLRGEMDFWGYGKQ*