AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0480020173.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480020173.01.T01 MTR_0063s0090 89.732 224 23 0 1 224 1 224 3.21e-150 417
MsG0480020173.01.T01 MTR_0008s0280 50.000 226 87 3 1 217 1 209 3.97e-70 215
MsG0480020173.01.T01 MTR_1g076150 44.490 245 101 4 1 234 1 221 2.12e-56 181
MsG0480020173.01.T01 MTR_1g043050 44.091 220 106 3 1 219 1 204 1.31e-55 179
MsG0480020173.01.T01 MTR_1g043080 42.735 234 113 4 1 234 1 213 3.76e-55 177
MsG0480020173.01.T01 MTR_2g089450 61.404 114 44 0 1 114 1 114 7.04e-51 166
MsG0480020173.01.T01 MTR_0251s0050 61.739 115 43 1 1 114 1 115 4.87e-50 165
MsG0480020173.01.T01 MTR_2g089420 41.071 224 110 8 1 217 1 209 5.81e-50 169
MsG0480020173.01.T01 MTR_0008s0390 60.870 115 44 1 1 114 1 115 1.35e-49 164
MsG0480020173.01.T01 MTR_8g095390 55.882 136 56 1 1 136 1 132 2.42e-49 164
MsG0480020173.01.T01 MTR_0008s0470 60.000 115 45 1 1 114 1 115 3.26e-49 163
MsG0480020173.01.T01 MTR_1g100653 62.281 114 43 0 1 114 1 114 3.87e-49 163
MsG0480020173.01.T01 MTR_4g073420 61.404 114 44 0 1 114 1 114 1.91e-48 161
MsG0480020173.01.T01 MTR_7g096930 63.158 114 42 0 1 114 1 114 2.25e-48 160
MsG0480020173.01.T01 MTR_5g007370 61.404 114 44 0 1 114 1 114 3.24e-48 161
MsG0480020173.01.T01 MTR_4g091490 62.609 115 42 1 1 114 1 115 5.63e-48 162
MsG0480020173.01.T01 MTR_2g011660 62.609 115 42 1 1 114 1 115 9.13e-48 161
MsG0480020173.01.T01 MTR_4g478180 62.281 114 43 0 1 114 2 115 1.67e-47 160
MsG0480020173.01.T01 MTR_3g074520 59.649 114 46 0 1 114 1 114 2.08e-47 160
MsG0480020173.01.T01 MTR_4g125520 58.065 124 52 0 1 124 1 124 2.44e-47 159
MsG0480020173.01.T01 MTR_3g097450 59.649 114 46 0 1 114 1 114 4.35e-47 158
MsG0480020173.01.T01 MTR_4g121460 62.281 114 43 0 1 114 1 114 6.77e-47 159
MsG0480020173.01.T01 MTR_7g115650 57.895 114 48 0 1 114 1 114 9.30e-47 154
MsG0480020173.01.T01 MTR_2g089620 60.526 114 45 0 1 114 1 114 1.59e-46 157
MsG0480020173.01.T01 MTR_5g079670 57.522 113 48 0 2 114 1 113 4.28e-46 153
MsG0480020173.01.T01 MTR_7g117730 55.833 120 53 0 1 120 1 120 6.12e-46 154
MsG0480020173.01.T01 MTR_5g029840 61.404 114 44 0 1 114 1 114 1.13e-45 155
MsG0480020173.01.T01 MTR_2g067420 64.220 109 39 0 3 111 5 113 1.48e-45 155
MsG0480020173.01.T01 MTR_7g076740 57.143 119 50 1 1 118 1 119 2.08e-45 154
MsG0480020173.01.T01 MTR_8g027345 58.772 114 47 0 1 114 1 114 2.54e-45 154
MsG0480020173.01.T01 MTR_3g461490 57.895 114 48 0 1 114 1 114 2.55e-45 154
MsG0480020173.01.T01 MTR_1g017000 59.130 115 46 1 1 114 1 115 1.20e-44 150
MsG0480020173.01.T01 MTR_2g034790 59.649 114 46 0 1 114 1 114 1.34e-44 152
MsG0480020173.01.T01 MTR_6g055910 39.167 240 128 7 4 242 6 228 2.43e-44 150
MsG0480020173.01.T01 MTR_7g011170 57.018 114 49 0 1 114 1 114 5.64e-44 150
MsG0480020173.01.T01 MTR_4g057635 60.000 115 45 1 1 114 1 115 1.32e-43 150
MsG0480020173.01.T01 MTR_4g102380 57.895 114 48 0 1 114 1 114 1.77e-43 148
MsG0480020173.01.T01 MTR_1g017140 39.720 214 122 3 1 207 1 214 1.93e-43 150
MsG0480020173.01.T01 MTR_2g095520 60.360 111 43 1 1 110 1 111 2.16e-43 149
MsG0480020173.01.T01 MTR_1g085040 52.174 138 61 2 9 146 9 141 5.45e-43 149
MsG0480020173.01.T01 MTR_5g014990 35.019 257 143 8 1 239 1 251 1.04e-42 147
MsG0480020173.01.T01 MTR_8g031360 57.759 116 47 2 1 114 1 116 1.28e-42 146
MsG0480020173.01.T01 MTR_7g102110 57.391 115 48 1 1 114 1 115 1.29e-42 145
MsG0480020173.01.T01 MTR_1g100667 63.725 102 37 0 13 114 14 115 1.38e-42 145
MsG0480020173.01.T01 MTR_3g103570 60.000 115 45 1 1 114 1 115 1.45e-42 147
MsG0480020173.01.T01 MTR_6g012690 57.018 114 49 0 1 114 1 114 2.56e-42 147
MsG0480020173.01.T01 MTR_4g082290 56.140 114 50 0 1 114 1 114 3.25e-42 148
MsG0480020173.01.T01 MTR_7g010210 56.140 114 50 0 1 114 1 114 3.91e-42 146
MsG0480020173.01.T01 MTR_7g010210 56.140 114 50 0 1 114 1 114 4.17e-42 144
MsG0480020173.01.T01 MTR_6g009430 50.000 136 64 1 1 136 1 132 4.51e-42 146
MsG0480020173.01.T01 MTR_4g097570 60.000 110 43 1 1 109 1 110 4.88e-42 145
MsG0480020173.01.T01 MTR_3g039990 41.624 197 94 5 1 197 2 177 5.12e-42 145
MsG0480020173.01.T01 MTR_3g083540 56.364 110 48 0 5 114 34 143 7.14e-42 145
MsG0480020173.01.T01 MTR_2g064160 57.547 106 45 0 9 114 8 113 1.53e-41 144
MsG0480020173.01.T01 MTR_7g110830 50.725 138 64 1 9 146 9 142 2.12e-41 145
MsG0480020173.01.T01 MTR_4g100720 56.364 110 46 1 9 118 10 117 3.82e-41 139
MsG0480020173.01.T01 MTR_4g097570 59.459 111 43 2 1 109 1 111 3.84e-41 142
MsG0480020173.01.T01 MTR_1g085640 50.370 135 63 1 9 143 9 139 4.30e-41 145
MsG0480020173.01.T01 MTR_5g078140 51.515 132 60 1 1 132 1 128 4.34e-41 143
MsG0480020173.01.T01 MTR_3g065440 55.263 114 51 0 1 114 1 114 4.96e-41 142
MsG0480020173.01.T01 MTR_6g012180 55.856 111 49 0 1 111 1 111 5.02e-41 143
MsG0480020173.01.T01 MTR_4g485530 58.879 107 41 1 8 114 11 114 6.80e-41 139
MsG0480020173.01.T01 MTR_1g112760 44.785 163 77 3 9 165 10 165 7.19e-41 140
MsG0480020173.01.T01 MTR_8g020490 57.018 114 45 1 1 114 1 110 1.02e-40 140
MsG0480020173.01.T01 MTR_6g090405 50.345 145 66 3 1 144 1 140 1.64e-40 140
MsG0480020173.01.T01 MTR_4g128670 52.206 136 64 1 1 135 1 136 4.44e-40 141
MsG0480020173.01.T01 MTR_2g099740 52.991 117 55 0 8 124 8 124 6.36e-40 142
MsG0480020173.01.T01 MTR_4g082230 54.386 114 52 0 1 114 1 114 1.30e-39 141
MsG0480020173.01.T01 MTR_3g077110 52.419 124 55 1 9 132 9 128 1.56e-39 140
MsG0480020173.01.T01 MTR_7g109320 60.526 114 45 0 1 114 1 114 1.95e-39 140
MsG0480020173.01.T01 MTR_4g105130 37.500 200 112 3 9 205 9 198 2.02e-39 140
MsG0480020173.01.T01 MTR_7g087130 55.263 114 51 0 1 114 1 114 2.46e-39 139
MsG0480020173.01.T01 MTR_0140s0030 52.632 114 54 0 1 114 2 115 6.38e-39 138
MsG0480020173.01.T01 MTR_0489s0020 52.632 114 54 0 1 114 2 115 6.38e-39 138
MsG0480020173.01.T01 MTR_1g086510 41.071 168 84 3 8 167 17 177 7.07e-39 136
MsG0480020173.01.T01 MTR_7g111290 59.406 101 41 0 9 109 9 109 8.73e-39 139
MsG0480020173.01.T01 MTR_8g017440 54.206 107 49 0 8 114 8 114 1.06e-38 137
MsG0480020173.01.T01 MTR_1g086530 48.760 121 55 1 12 125 33 153 1.21e-38 135
MsG0480020173.01.T01 MTR_3g052450 56.075 107 47 0 8 114 36 142 1.50e-38 140
MsG0480020173.01.T01 MTR_8g017540 54.206 107 49 0 8 114 54 160 2.00e-38 138
MsG0480020173.01.T01 MTR_8g098860 54.206 107 49 0 8 114 8 114 2.59e-38 136
MsG0480020173.01.T01 MTR_1g062940 55.340 103 46 0 12 114 6 108 2.93e-38 133
MsG0480020173.01.T01 MTR_1g110460 51.818 110 53 0 8 117 22 131 3.39e-38 135
MsG0480020173.01.T01 MTR_1g045610 54.717 106 48 0 13 118 22 127 4.67e-38 134
MsG0480020173.01.T01 MTR_8g017500 52.212 113 54 0 8 120 8 120 5.37e-38 135
MsG0480020173.01.T01 MTR_1g073170 54.717 106 48 0 13 118 21 126 7.77e-38 133
MsG0480020173.01.T01 MTR_5g010020 54.808 104 47 0 8 111 8 111 1.02e-37 135
MsG0480020173.01.T01 MTR_3g052430 56.311 103 45 0 12 114 41 143 1.46e-37 138
MsG0480020173.01.T01 MTR_2g097910 53.398 103 48 0 12 114 20 122 1.90e-37 134
MsG0480020173.01.T01 MTR_0197s0010 56.566 99 43 0 16 114 5 103 3.40e-37 130
MsG0480020173.01.T01 MTR_7g035075 56.311 103 45 0 12 114 14 116 4.06e-37 130
MsG0480020173.01.T01 MTR_5g042030 56.731 104 45 0 11 114 6 109 6.84e-37 131
MsG0480020173.01.T01 MTR_5g079290 52.885 104 49 0 11 114 16 119 8.14e-37 130
MsG0480020173.01.T01 MTR_3g011610 52.336 107 51 0 12 118 37 143 8.17e-37 135
MsG0480020173.01.T01 MTR_6g006030 52.727 110 52 0 12 121 14 123 1.01e-36 129
MsG0480020173.01.T01 MTR_4g065017 54.286 105 48 0 10 114 15 119 1.98e-36 131
MsG0480020173.01.T01 MTR_8g042410 54.369 103 47 0 12 114 37 139 3.86e-36 134
MsG0480020173.01.T01 MTR_5g079120 50.467 107 53 0 8 114 57 163 9.99e-36 129
MsG0480020173.01.T01 MTR_5g079220 50.962 104 51 0 11 114 20 123 1.25e-35 128
MsG0480020173.01.T01 MTR_3g028740 53.271 107 50 0 8 114 18 124 1.39e-35 129
MsG0480020173.01.T01 MTR_5g078800 51.923 104 50 0 11 114 6 109 1.50e-35 127
MsG0480020173.01.T01 MTR_1g021230 53.271 107 50 0 12 118 57 163 1.76e-35 131
MsG0480020173.01.T01 MTR_7g017260 36.898 187 87 4 11 193 24 183 2.66e-35 127
MsG0480020173.01.T01 MTR_8g017340 55.140 107 47 1 9 114 9 115 7.73e-35 130
MsG0480020173.01.T01 MTR_8g017390 51.852 108 51 1 8 114 8 115 8.21e-35 129
MsG0480020173.01.T01 MTR_8g060940 51.961 102 49 0 11 112 6 107 1.07e-34 124
MsG0480020173.01.T01 MTR_0247s0040 49.057 106 54 0 8 113 3 108 1.09e-34 122
MsG0480020173.01.T01 MTR_5g078950 50.485 103 51 0 11 113 6 108 2.00e-34 124
MsG0480020173.01.T01 MTR_0001s0360 51.923 104 50 0 11 114 6 109 4.85e-34 123
MsG0480020173.01.T01 MTR_8g017350 54.206 107 48 1 9 114 9 115 6.72e-34 129
MsG0480020173.01.T01 MTR_4g063100 50.000 102 51 0 13 114 8 109 8.17e-34 122
MsG0480020173.01.T01 MTR_2g033170 50.000 124 55 1 12 128 24 147 1.37e-33 124
MsG0480020173.01.T01 MTR_5g078860 50.962 104 51 0 11 114 6 109 1.52e-33 123
MsG0480020173.01.T01 MTR_0193s0090 37.037 162 92 2 6 157 1 162 2.53e-33 120
MsG0480020173.01.T01 MTR_5g078910 49.515 103 52 0 12 114 7 109 2.53e-33 122
MsG0480020173.01.T01 MTR_2g096380 48.148 108 56 0 12 119 6 113 3.10e-33 120
MsG0480020173.01.T01 MTR_2g088170 52.727 110 52 0 9 118 26 135 4.42e-33 125
MsG0480020173.01.T01 MTR_4g123040 50.000 124 55 1 12 128 24 147 5.95e-33 122
MsG0480020173.01.T01 MTR_1g083630 53.774 106 49 0 12 117 12 117 1.52e-32 125
MsG0480020173.01.T01 MTR_5g007300 59.091 88 36 0 1 88 53 140 2.47e-32 115
MsG0480020173.01.T01 MTR_5g062790 46.729 107 56 1 12 117 9 115 7.98e-32 118
MsG0480020173.01.T01 MTR_5g088080 46.729 107 56 1 12 117 12 118 1.24e-31 117
MsG0480020173.01.T01 MTR_5g088150 46.729 107 56 1 12 117 12 118 1.24e-31 117
MsG0480020173.01.T01 MTR_5g488210 46.729 107 56 1 12 117 12 118 1.24e-31 117
MsG0480020173.01.T01 MTR_5g088640 46.729 107 56 1 12 117 12 118 1.88e-31 117
MsG0480020173.01.T01 MTR_5g488170 46.729 107 56 1 12 117 12 118 2.93e-31 115
MsG0480020173.01.T01 MTR_5g078930 44.628 121 63 1 13 129 10 130 5.68e-31 114
MsG0480020173.01.T01 MTR_6g055910 36.816 201 109 7 43 242 16 199 5.48e-30 112
MsG0480020173.01.T01 MTR_8g006470 45.946 111 59 1 8 117 6 116 8.24e-30 113
MsG0480020173.01.T01 MTR_3g045430 43.478 115 64 1 1 114 1 115 6.20e-29 110
MsG0480020173.01.T01 MTR_5g016510 45.038 131 61 4 14 135 5 133 6.32e-29 111
MsG0480020173.01.T01 MTR_4g029540 44.248 113 62 1 7 118 5 117 7.05e-29 110
MsG0480020173.01.T01 MTR_5g088610 46.729 107 56 1 12 117 9 115 1.60e-28 110
MsG0480020173.01.T01 MTR_4g094982 48.077 104 52 2 14 116 5 107 3.29e-27 105
MsG0480020173.01.T01 MTR_3g101290 45.545 101 54 1 14 114 37 136 4.04e-27 104
MsG0480020173.01.T01 MTR_4g063100 58.333 72 30 0 43 114 9 80 7.90e-27 103
MsG0480020173.01.T01 MTR_4g019370 49.020 102 49 2 14 114 38 137 1.20e-26 105
MsG0480020173.01.T01 MTR_6g015455 50.962 104 49 2 14 116 5 107 1.43e-26 108
MsG0480020173.01.T01 MTR_5g082910 46.364 110 49 3 8 112 12 116 9.36e-26 102
MsG0480020173.01.T01 MTR_2g096380 54.545 77 35 0 43 119 18 94 1.26e-25 100
MsG0480020173.01.T01 MTR_7g111290 61.194 67 26 0 43 109 1 67 7.06e-25 100
MsG0480020173.01.T01 MTR_5g070020 37.143 140 82 4 14 149 122 259 1.29e-24 100
MsG0480020173.01.T01 MTR_6g074860 40.187 107 61 2 14 119 4 108 1.01e-23 95.9
MsG0480020173.01.T01 MTR_5g049190 38.261 115 68 2 8 121 13 125 1.08e-23 95.9
MsG0480020173.01.T01 MTR_4g128190 40.741 108 50 2 11 117 10 104 1.13e-23 95.9
MsG0480020173.01.T01 MTR_6g027340 32.609 184 112 5 14 195 16 189 1.31e-23 94.7
MsG0480020173.01.T01 MTR_7g061330 46.078 102 52 2 14 114 113 212 3.38e-23 98.2
MsG0480020173.01.T01 MTR_7g061330 33.000 100 65 2 14 112 61 159 4.76e-12 65.5
MsG0480020173.01.T01 MTR_7g461410 46.078 102 52 2 14 114 113 212 3.38e-23 98.2
MsG0480020173.01.T01 MTR_7g461410 33.000 100 65 2 14 112 61 159 4.76e-12 65.5
MsG0480020173.01.T01 MTR_1g085880 46.667 105 54 2 12 114 11 115 3.91e-23 93.2
MsG0480020173.01.T01 MTR_7g061330 46.078 102 52 2 14 114 77 176 5.90e-23 97.4
MsG0480020173.01.T01 MTR_7g061330 33.000 100 65 2 14 112 25 123 6.37e-12 65.1
MsG0480020173.01.T01 MTR_4g082040 35.000 140 80 5 14 149 105 237 8.37e-23 96.3
MsG0480020173.01.T01 MTR_1g085770 46.667 105 54 2 12 114 11 115 1.54e-22 94.0
MsG0480020173.01.T01 MTR_5g041570 42.157 102 56 2 14 114 134 233 2.02e-22 95.5
MsG0480020173.01.T01 MTR_3g089045 42.593 108 59 2 8 114 10 115 3.94e-22 92.8
MsG0480020173.01.T01 MTR_6g027360 33.333 183 108 5 12 193 76 245 4.75e-22 92.8
MsG0480020173.01.T01 MTR_4g105660 40.000 120 64 3 12 125 178 295 5.90e-22 94.0
MsG0480020173.01.T01 MTR_3g077650 37.857 140 79 3 14 147 181 318 9.26e-22 93.6
MsG0480020173.01.T01 MTR_3g463400 37.273 110 66 2 14 122 133 240 5.97e-21 91.3
MsG0480020173.01.T01 MTR_7g035350 41.748 103 58 2 8 110 220 320 6.42e-21 91.3
MsG0480020173.01.T01 MTR_3g110028 42.157 102 56 2 14 114 85 184 6.66e-21 91.7
MsG0480020173.01.T01 MTR_3g110028 33.333 105 58 3 14 112 33 131 3.11e-12 66.2
MsG0480020173.01.T01 MTR_1g057980 38.889 108 65 1 12 119 78 184 1.34e-20 88.6
MsG0480020173.01.T01 MTR_7g451170 36.207 116 73 1 14 129 191 305 1.45e-20 89.7
MsG0480020173.01.T01 MTR_1g026870 42.157 102 56 2 14 114 85 184 2.50e-20 90.1
MsG0480020173.01.T01 MTR_1g026870 33.333 105 58 3 14 112 33 131 7.63e-13 68.2
MsG0480020173.01.T01 MTR_7g037260 36.207 116 73 1 12 127 143 257 3.03e-20 88.6
MsG0480020173.01.T01 MTR_7g086960 36.290 124 71 3 14 131 89 210 1.78e-19 86.3
MsG0480020173.01.T01 MTR_6g027370 36.842 114 69 2 14 127 99 209 3.70e-19 85.5
MsG0480020173.01.T01 MTR_4g088015 37.864 103 63 1 12 114 219 320 5.43e-19 85.5
MsG0480020173.01.T01 MTR_7g037130 37.963 108 65 2 12 119 143 248 1.01e-18 84.3
MsG0480020173.01.T01 MTR_7g061550 32.061 131 81 3 17 145 10 134 1.57e-18 83.6
MsG0480020173.01.T01 MTR_0023s0210 43.590 78 44 0 11 88 6 83 1.76e-18 77.8
MsG0480020173.01.T01 MTR_5g010650 41.667 96 55 1 14 109 110 204 2.23e-18 84.0
MsG0480020173.01.T01 MTR_7g450950 36.082 97 61 1 14 110 157 252 6.12e-17 79.0
MsG0480020173.01.T01 MTR_6g055910 32.941 170 96 7 74 242 6 158 2.57e-14 70.1
MsG0480020173.01.T01 MTR_8g468380 32.710 107 61 2 17 118 25 125 3.44e-12 65.9
MsG0480020173.01.T01 MTR_5g038910 32.673 101 67 1 17 117 29 128 4.16e-12 65.5
MsG0480020173.01.T01 MTR_5g038910 32.673 101 67 1 17 117 29 128 6.96e-12 64.7
MsG0480020173.01.T01 MTR_4g063100 54.545 44 20 0 71 114 2 45 1.05e-11 62.4
MsG0480020173.01.T01 MTR_2g096380 48.980 49 25 0 71 119 2 50 6.84e-11 59.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480020173.01.T01 AT1G79180 68.750 112 35 0 3 114 5 116 1.70e-52 172
MsG0480020173.01.T01 AT1G16490 66.071 112 38 0 3 114 5 116 1.28e-50 166
MsG0480020173.01.T01 AT5G16770 50.920 163 68 3 1 162 1 152 1.45e-50 168
MsG0480020173.01.T01 AT5G16770 50.920 163 68 3 1 162 1 152 1.45e-50 168
MsG0480020173.01.T01 AT5G16770 50.920 163 68 3 1 162 1 152 1.86e-50 168
MsG0480020173.01.T01 AT5G16770 50.920 163 68 3 1 162 1 152 1.86e-50 168
MsG0480020173.01.T01 AT5G10280 61.404 114 44 0 1 114 1 114 2.46e-50 167
MsG0480020173.01.T01 AT4G21440 62.281 114 43 0 1 114 1 114 4.83e-50 167
MsG0480020173.01.T01 AT3G23250 61.475 122 45 1 1 122 1 120 4.87e-50 165
MsG0480020173.01.T01 AT1G35515 62.281 114 43 0 1 114 1 114 1.93e-49 161
MsG0480020173.01.T01 AT1G22640 62.281 114 43 0 1 114 1 114 2.17e-49 163
MsG0480020173.01.T01 AT4G09460 62.281 114 43 0 1 114 1 114 3.30e-49 162
MsG0480020173.01.T01 AT4G28110 62.281 114 43 0 1 114 1 114 3.55e-49 163
MsG0480020173.01.T01 AT2G31180 63.158 114 42 0 1 114 1 114 5.87e-49 161
MsG0480020173.01.T01 AT1G06180 64.035 114 41 0 1 114 1 114 9.06e-49 161
MsG0480020173.01.T01 AT4G38620 61.404 114 44 0 1 114 1 114 1.22e-48 162
MsG0480020173.01.T01 AT3G12820 64.286 112 40 0 3 114 5 116 3.06e-48 159
MsG0480020173.01.T01 AT2G16720 42.381 210 95 5 1 201 1 193 3.07e-48 160
MsG0480020173.01.T01 AT5G65230 61.404 114 44 0 1 114 1 114 7.94e-48 160
MsG0480020173.01.T01 AT3G02940 60.526 114 45 0 1 114 1 114 1.31e-47 160
MsG0480020173.01.T01 AT3G02940 60.526 114 45 0 1 114 1 114 1.95e-47 159
MsG0480020173.01.T01 AT3G02940 60.526 114 45 0 1 114 1 114 1.95e-47 159
MsG0480020173.01.T01 AT1G74080 49.045 157 76 1 1 157 1 153 2.06e-47 160
MsG0480020173.01.T01 AT1G56160 64.286 112 40 0 3 114 5 116 3.63e-47 158
MsG0480020173.01.T01 AT4G34990 59.649 114 46 0 1 114 1 114 1.28e-46 156
MsG0480020173.01.T01 AT5G49330 62.281 114 43 0 1 114 1 114 1.71e-46 158
MsG0480020173.01.T01 AT4G05100 60.870 115 44 1 1 114 1 115 2.18e-46 157
MsG0480020173.01.T01 AT1G34670 60.526 114 45 0 1 114 1 114 4.31e-46 157
MsG0480020173.01.T01 AT2G47460 61.404 114 44 0 1 114 1 114 4.77e-46 157
MsG0480020173.01.T01 AT1G79180 52.414 145 36 1 3 114 5 149 7.21e-46 155
MsG0480020173.01.T01 AT3G62610 60.526 114 45 0 1 114 1 114 7.81e-46 156
MsG0480020173.01.T01 AT5G60890 43.023 172 94 1 1 172 1 168 1.08e-45 154
MsG0480020173.01.T01 AT3G61250 57.895 114 48 0 1 114 1 114 3.08e-45 153
MsG0480020173.01.T01 AT5G61420 52.083 144 60 2 1 139 1 140 4.82e-45 154
MsG0480020173.01.T01 AT1G57560 52.632 133 59 1 9 141 9 137 9.85e-45 151
MsG0480020173.01.T01 AT5G07690 58.772 114 47 0 1 114 1 114 1.63e-44 152
MsG0480020173.01.T01 AT3G01140 58.772 114 47 0 1 114 1 114 1.96e-44 152
MsG0480020173.01.T01 AT5G07700 50.360 139 65 1 1 139 1 135 2.02e-44 152
MsG0480020173.01.T01 AT5G07700 50.360 139 65 1 1 139 1 135 2.02e-44 152
MsG0480020173.01.T01 AT4G22680 49.333 150 72 1 1 150 1 146 3.31e-44 150
MsG0480020173.01.T01 AT1G57560 52.555 137 59 2 9 143 9 141 4.84e-44 150
MsG0480020173.01.T01 AT5G56110 57.895 114 48 0 1 114 1 114 5.13e-44 150
MsG0480020173.01.T01 AT1G18570 58.261 115 47 1 1 114 1 115 6.04e-44 151
MsG0480020173.01.T01 AT3G01140 57.895 114 48 0 1 114 44 157 1.24e-43 151
MsG0480020173.01.T01 AT3G13540 44.186 172 83 3 4 175 15 173 1.81e-43 147
MsG0480020173.01.T01 AT4G17785 56.522 115 49 1 1 114 1 115 2.18e-43 150
MsG0480020173.01.T01 AT4G17785 56.522 115 49 1 1 114 1 115 2.34e-43 150
MsG0480020173.01.T01 AT5G15310 53.030 132 58 1 1 132 1 128 2.49e-43 149
MsG0480020173.01.T01 AT5G15310 53.030 132 58 1 1 132 1 128 3.28e-43 146
MsG0480020173.01.T01 AT5G15310 53.030 132 58 1 1 132 1 128 3.46e-43 148
MsG0480020173.01.T01 AT4G37780 56.061 132 57 1 1 131 1 132 3.70e-43 148
MsG0480020173.01.T01 AT1G66230 41.667 204 111 4 1 203 1 197 4.33e-43 147
MsG0480020173.01.T01 AT5G14750 44.586 157 80 2 10 159 14 170 4.91e-43 145
MsG0480020173.01.T01 AT5G57620 53.788 132 56 2 1 127 1 132 9.45e-43 148
MsG0480020173.01.T01 AT5G26660 53.488 129 56 1 9 137 9 133 2.73e-42 147
MsG0480020173.01.T01 AT3G12720 58.491 106 44 0 9 114 19 124 2.83e-42 146
MsG0480020173.01.T01 AT5G65790 55.645 124 54 1 1 123 1 124 3.48e-42 147
MsG0480020173.01.T01 AT3G49690 55.645 124 54 1 1 123 1 124 6.56e-42 145
MsG0480020173.01.T01 AT1G18710 55.263 114 51 0 1 114 1 114 6.60e-42 144
MsG0480020173.01.T01 AT5G16600 51.825 137 62 1 1 137 1 133 6.78e-42 145
MsG0480020173.01.T01 AT4G12350 57.018 114 49 0 1 114 1 114 6.81e-42 144
MsG0480020173.01.T01 AT5G54230 62.136 103 39 0 12 114 12 114 1.19e-41 144
MsG0480020173.01.T01 AT5G23000 57.391 115 48 1 1 114 1 115 1.31e-41 145
MsG0480020173.01.T01 AT3G28910 56.140 114 50 0 1 114 1 114 1.99e-41 144
MsG0480020173.01.T01 AT1G74430 48.148 135 66 1 1 135 1 131 2.18e-41 142
MsG0480020173.01.T01 AT3G27920 37.374 198 104 4 13 198 15 204 7.21e-41 140
MsG0480020173.01.T01 AT5G40330 54.902 102 46 0 13 114 13 114 1.10e-40 139
MsG0480020173.01.T01 AT2G36890 58.261 115 47 1 1 114 1 115 1.13e-40 141
MsG0480020173.01.T01 AT1G09540 51.938 129 58 1 9 137 9 133 1.17e-40 143
MsG0480020173.01.T01 AT2G36890 58.261 115 47 1 1 114 42 156 1.45e-40 142
MsG0480020173.01.T01 AT5G35550 60.194 103 41 0 12 114 14 116 1.88e-40 140
MsG0480020173.01.T01 AT3G47600 48.951 143 63 2 1 143 1 133 3.19e-40 141
MsG0480020173.01.T01 AT1G08810 56.140 114 50 0 1 114 1 114 8.72e-40 139
MsG0480020173.01.T01 AT5G62320 51.261 119 51 1 3 114 4 122 9.41e-40 137
MsG0480020173.01.T01 AT3G28470 53.636 110 51 0 1 110 1 110 9.99e-40 139
MsG0480020173.01.T01 AT5G14340 54.386 114 52 0 1 114 13 126 1.12e-39 138
MsG0480020173.01.T01 AT2G32460 54.630 108 49 0 11 118 17 124 1.14e-39 143
MsG0480020173.01.T01 AT2G32460 54.630 108 49 0 11 118 5 112 1.29e-39 142
MsG0480020173.01.T01 AT4G01680 56.140 114 50 0 1 114 1 114 1.54e-39 137
MsG0480020173.01.T01 AT5G62470 54.386 114 52 0 1 114 1 114 4.27e-39 139
MsG0480020173.01.T01 AT3G24310 56.481 108 47 0 11 118 17 124 8.91e-39 135
MsG0480020173.01.T01 AT1G74650 54.386 114 52 0 1 114 1 114 9.08e-39 137
MsG0480020173.01.T01 AT4G01680 56.140 114 50 0 1 114 1 114 9.69e-39 137
MsG0480020173.01.T01 AT3G13890 54.206 107 49 0 8 114 8 114 1.00e-38 138
MsG0480020173.01.T01 AT5G52260 47.097 155 73 2 1 146 1 155 1.65e-38 135
MsG0480020173.01.T01 AT1G63910 54.206 107 49 0 8 114 8 114 2.73e-38 137
MsG0480020173.01.T01 AT3G11440 55.340 103 46 0 12 114 41 143 4.23e-38 138
MsG0480020173.01.T01 AT3G30210 48.819 127 65 0 11 137 26 152 6.28e-38 134
MsG0480020173.01.T01 AT3G27810 53.043 115 54 0 12 126 20 134 7.49e-38 132
MsG0480020173.01.T01 AT1G48000 50.806 124 54 2 12 128 32 155 9.03e-38 132
MsG0480020173.01.T01 AT3G11440 55.340 103 46 0 12 114 41 143 9.46e-38 139
MsG0480020173.01.T01 AT3G11440 55.340 103 46 0 12 114 41 143 9.46e-38 139
MsG0480020173.01.T01 AT3G11440 55.340 103 46 0 12 114 41 143 9.46e-38 139
MsG0480020173.01.T01 AT5G62470 54.386 114 51 1 1 114 1 113 1.48e-37 135
MsG0480020173.01.T01 AT5G06100 50.893 112 55 0 7 118 27 138 1.53e-37 137
MsG0480020173.01.T01 AT5G12870 54.369 103 47 0 12 114 18 120 3.41e-37 132
MsG0480020173.01.T01 AT5G55020 55.340 103 46 0 12 114 26 128 3.61e-37 137
MsG0480020173.01.T01 AT5G06100 50.893 112 55 0 7 118 27 138 3.68e-37 137
MsG0480020173.01.T01 AT5G06100 50.893 112 55 0 7 118 27 138 3.68e-37 137
MsG0480020173.01.T01 AT5G06100 50.893 112 55 0 7 118 27 138 3.68e-37 137
MsG0480020173.01.T01 AT5G06100 50.893 112 55 0 7 118 27 138 3.68e-37 137
MsG0480020173.01.T01 AT4G26930 54.369 103 47 0 12 114 19 121 5.68e-37 134
MsG0480020173.01.T01 AT5G52600 49.550 111 56 0 9 119 9 119 6.01e-37 129
MsG0480020173.01.T01 AT3G48920 52.586 116 55 0 9 124 15 130 8.63e-37 130
MsG0480020173.01.T01 AT4G13480 55.238 105 47 0 13 117 7 111 9.30e-37 130
MsG0480020173.01.T01 AT4G25560 58.824 102 42 0 13 114 11 112 4.18e-36 129
MsG0480020173.01.T01 AT1G68320 50.943 106 52 0 12 117 19 124 4.98e-36 129
MsG0480020173.01.T01 AT5G40350 40.698 172 88 3 12 169 17 188 5.07e-36 127
MsG0480020173.01.T01 AT3G08500 53.271 107 50 0 8 114 26 132 7.66e-36 130
MsG0480020173.01.T01 AT3G13890 50.000 116 49 1 8 114 8 123 1.33e-35 130
MsG0480020173.01.T01 AT2G47190 50.943 106 52 0 12 117 20 125 1.93e-35 127
MsG0480020173.01.T01 AT4G01680 52.542 118 44 1 9 114 9 126 2.39e-35 129
MsG0480020173.01.T01 AT3G01530 51.887 106 51 0 12 117 25 130 2.67e-35 125
MsG0480020173.01.T01 AT1G25340 51.429 105 51 0 13 117 19 123 6.75e-35 126
MsG0480020173.01.T01 AT1G66380 42.069 145 70 1 11 155 7 137 1.16e-34 121
MsG0480020173.01.T01 AT2G26960 50.459 109 54 0 9 117 17 125 1.23e-34 128
MsG0480020173.01.T01 AT1G66370 46.281 121 60 1 11 126 7 127 1.25e-34 124
MsG0480020173.01.T01 AT1G56650 43.750 160 73 4 11 155 7 164 1.41e-34 124
MsG0480020173.01.T01 AT3G53200 44.526 137 69 1 6 135 3 139 5.40e-34 122
MsG0480020173.01.T01 AT3G46130 48.624 109 56 0 11 119 8 116 8.05e-34 122
MsG0480020173.01.T01 AT5G59780 48.598 107 55 0 13 119 9 115 1.32e-33 121
MsG0480020173.01.T01 AT3G06490 48.438 128 59 1 8 128 15 142 1.57e-33 123
MsG0480020173.01.T01 AT5G49620 49.194 124 56 1 12 128 26 149 1.02e-32 121
MsG0480020173.01.T01 AT1G66390 51.923 104 50 0 11 114 7 110 5.94e-32 117
MsG0480020173.01.T01 AT5G14750 45.763 118 52 3 40 145 5 122 3.66e-31 113
MsG0480020173.01.T01 AT1G25340 48.571 105 49 1 13 117 19 118 2.90e-30 114
MsG0480020173.01.T01 AT1G25340 48.571 105 49 1 13 117 19 118 5.23e-30 114
MsG0480020173.01.T01 AT5G35550 64.000 75 27 0 40 114 45 119 1.30e-29 112
MsG0480020173.01.T01 AT5G49620 44.203 138 56 2 12 128 26 163 6.06e-29 111
MsG0480020173.01.T01 AT3G60460 42.727 110 62 1 9 117 8 117 3.70e-28 108
MsG0480020173.01.T01 AT5G26660 54.839 93 38 1 45 137 14 102 7.12e-28 108
MsG0480020173.01.T01 AT2G23290 43.165 139 72 3 14 151 13 145 1.11e-27 107
MsG0480020173.01.T01 AT3G12820 67.164 67 22 0 48 114 2 68 1.38e-27 104
MsG0480020173.01.T01 AT2G26950 46.078 102 55 0 9 110 13 114 1.46e-27 108
MsG0480020173.01.T01 AT3G27810 56.098 82 36 0 45 126 4 85 2.80e-27 103
MsG0480020173.01.T01 AT4G37260 50.962 104 49 2 14 116 13 115 3.38e-27 107
MsG0480020173.01.T01 AT3G09230 47.619 105 46 2 14 114 55 154 3.89e-27 107
MsG0480020173.01.T01 AT3G53200 51.020 98 41 1 45 135 9 106 4.11e-27 103
MsG0480020173.01.T01 AT3G46130 56.579 76 33 0 44 119 9 84 2.38e-26 102
MsG0480020173.01.T01 AT5G59780 57.333 75 32 0 45 119 20 94 2.49e-26 102
MsG0480020173.01.T01 AT1G69560 32.569 218 117 10 9 216 102 299 3.07e-26 104
MsG0480020173.01.T01 AT1G69560 32.110 218 118 9 9 216 118 315 3.48e-26 104
MsG0480020173.01.T01 AT3G46130 57.333 75 32 0 45 119 20 94 5.71e-26 101
MsG0480020173.01.T01 AT3G50060 46.154 104 54 2 14 116 6 108 7.72e-26 102
MsG0480020173.01.T01 AT5G40350 58.571 70 29 0 45 114 5 74 4.20e-25 97.8
MsG0480020173.01.T01 AT5G67300 43.119 109 61 1 14 122 6 113 6.53e-25 100
MsG0480020173.01.T01 AT3G55730 47.059 102 51 2 14 114 56 155 8.00e-25 101
MsG0480020173.01.T01 AT1G17950 41.121 107 60 2 14 119 5 109 2.25e-24 97.8
MsG0480020173.01.T01 AT3G09370 35.519 183 106 6 14 195 143 314 9.67e-24 99.8
MsG0480020173.01.T01 AT3G09370 34.000 100 64 2 14 112 91 189 6.99e-12 65.1
MsG0480020173.01.T01 AT3G09370 35.519 183 106 6 14 195 135 306 1.19e-23 99.4
MsG0480020173.01.T01 AT3G09370 34.000 100 64 2 14 112 83 181 8.53e-12 64.7
MsG0480020173.01.T01 AT3G09370 35.519 183 106 6 14 195 130 301 1.32e-23 99.0
MsG0480020173.01.T01 AT3G09370 34.000 100 64 2 14 112 78 176 9.23e-12 64.7
MsG0480020173.01.T01 AT3G27785 41.176 119 68 2 9 126 184 301 2.20e-23 98.2
MsG0480020173.01.T01 AT3G47600 47.475 99 42 2 45 143 39 127 2.50e-23 96.7
MsG0480020173.01.T01 AT1G66380 40.708 113 53 1 43 155 6 104 3.68e-23 90.9
MsG0480020173.01.T01 AT3G29020 29.814 161 100 4 14 171 65 215 6.16e-23 93.6
MsG0480020173.01.T01 AT5G02320 44.118 102 54 2 14 114 127 226 9.39e-23 97.1
MsG0480020173.01.T01 AT5G02320 33.000 100 65 2 14 112 75 173 1.83e-12 66.6
MsG0480020173.01.T01 AT5G02320 44.118 102 54 2 14 114 127 226 9.39e-23 97.1
MsG0480020173.01.T01 AT5G02320 33.000 100 65 2 14 112 75 173 1.83e-12 66.6
MsG0480020173.01.T01 AT1G26780 41.346 104 58 2 12 114 96 197 9.76e-23 95.5
MsG0480020173.01.T01 AT1G26780 41.346 104 58 2 12 114 96 197 1.09e-22 94.0
MsG0480020173.01.T01 AT3G29020 33.333 144 89 3 14 157 67 203 1.25e-22 94.4
MsG0480020173.01.T01 AT5G02320 44.118 102 54 2 14 114 67 166 1.25e-22 96.3
MsG0480020173.01.T01 AT5G02320 33.000 100 65 2 14 112 15 113 2.45e-12 66.2
MsG0480020173.01.T01 AT5G58850 38.182 110 65 2 14 122 105 212 2.15e-22 95.1
MsG0480020173.01.T01 AT1G73410 42.857 105 57 2 14 117 6 108 3.36e-22 92.0
MsG0480020173.01.T01 AT1G73410 42.453 106 58 2 14 118 6 109 4.23e-22 90.9
MsG0480020173.01.T01 AT5G40360 35.965 114 72 1 1 114 145 257 4.84e-22 93.6
MsG0480020173.01.T01 AT1G66380 50.000 82 41 0 11 92 7 88 7.22e-22 87.4
MsG0480020173.01.T01 AT5G11050 38.182 110 65 2 14 122 105 212 9.96e-22 93.2
MsG0480020173.01.T01 AT5G14750 44.211 95 46 2 58 145 1 95 1.77e-21 87.4
MsG0480020173.01.T01 AT5G14750 44.211 95 46 2 58 145 1 95 1.77e-21 87.4
MsG0480020173.01.T01 AT1G22640 64.912 57 20 0 58 114 1 57 2.83e-21 88.6
MsG0480020173.01.T01 AT1G18960 43.564 101 54 2 14 114 10 107 2.92e-21 90.5
MsG0480020173.01.T01 AT4G32730 42.157 102 56 2 14 114 87 186 3.06e-21 92.8
MsG0480020173.01.T01 AT4G32730 32.381 105 59 3 14 112 35 133 4.27e-11 62.8
MsG0480020173.01.T01 AT4G32730 42.157 102 56 2 14 114 87 186 3.06e-21 92.8
MsG0480020173.01.T01 AT4G32730 32.381 105 59 3 14 112 35 133 4.27e-11 62.8
MsG0480020173.01.T01 AT4G32730 42.157 102 56 2 14 114 87 186 3.06e-21 92.8
MsG0480020173.01.T01 AT4G32730 32.381 105 59 3 14 112 35 133 4.27e-11 62.8
MsG0480020173.01.T01 AT4G32730 42.157 102 56 2 14 114 87 186 3.06e-21 92.8
MsG0480020173.01.T01 AT4G32730 32.381 105 59 3 14 112 35 133 4.27e-11 62.8
MsG0480020173.01.T01 AT4G18770 36.792 106 66 1 9 114 212 316 3.81e-21 91.7
MsG0480020173.01.T01 AT4G32730 42.157 102 56 2 14 114 87 186 4.14e-21 92.4
MsG0480020173.01.T01 AT4G32730 32.381 105 59 3 14 112 35 133 5.61e-11 62.4
MsG0480020173.01.T01 AT5G17800 38.462 104 63 1 14 117 93 195 4.58e-21 90.5
MsG0480020173.01.T01 AT5G11510 39.604 101 60 1 14 114 81 180 4.70e-21 92.0
MsG0480020173.01.T01 AT5G11510 33.000 100 65 2 14 112 29 127 1.82e-11 63.9
MsG0480020173.01.T01 AT5G11510 39.604 101 60 1 14 114 81 180 4.70e-21 92.0
MsG0480020173.01.T01 AT5G11510 33.000 100 65 2 14 112 29 127 1.82e-11 63.9
MsG0480020173.01.T01 AT5G11510 39.604 101 60 1 14 114 81 180 4.70e-21 92.0
MsG0480020173.01.T01 AT5G11510 33.000 100 65 2 14 112 29 127 1.82e-11 63.9
MsG0480020173.01.T01 AT4G33450 35.156 128 81 2 9 136 14 139 4.78e-21 89.0
MsG0480020173.01.T01 AT2G39880 43.810 105 50 2 14 114 50 149 5.46e-21 90.9
MsG0480020173.01.T01 AT5G11510 39.604 101 60 1 14 114 81 180 6.77e-21 91.7
MsG0480020173.01.T01 AT5G11510 33.000 100 65 2 14 112 29 127 2.03e-11 63.9
MsG0480020173.01.T01 AT5G11510 39.604 101 60 1 14 114 81 180 6.90e-21 91.7
MsG0480020173.01.T01 AT5G11510 33.000 100 65 2 14 112 29 127 2.05e-11 63.9
MsG0480020173.01.T01 AT3G23250 60.000 65 24 1 58 122 1 63 1.18e-20 87.4
MsG0480020173.01.T01 AT5G39700 33.083 133 82 2 13 145 55 180 1.52e-19 83.6
MsG0480020173.01.T01 AT4G00540 40.187 107 58 3 12 114 101 205 1.25e-18 84.3
MsG0480020173.01.T01 AT4G00540 30.841 107 66 2 14 112 46 152 3.50e-11 62.8
MsG0480020173.01.T01 AT2G25230 31.897 116 78 1 4 119 16 130 1.34e-18 82.0
MsG0480020173.01.T01 AT2G37630 35.652 115 72 1 17 129 7 121 1.76e-18 83.6
MsG0480020173.01.T01 AT4G00540 40.187 107 58 3 12 114 99 203 1.85e-18 84.0
MsG0480020173.01.T01 AT4G00540 30.841 107 66 2 14 112 44 150 4.24e-11 62.8
MsG0480020173.01.T01 AT1G71030 50.000 64 32 0 51 114 5 68 4.63e-18 79.3
MsG0480020173.01.T01 AT1G71030 50.000 64 32 0 51 114 19 82 5.09e-18 79.7
MsG0480020173.01.T01 AT5G40430 30.088 113 77 2 4 116 44 154 1.51e-14 71.2
MsG0480020173.01.T01 AT1G14350 30.081 123 71 3 17 130 28 144 5.57e-13 68.2
MsG0480020173.01.T01 AT1G14350 30.081 123 71 3 17 130 28 144 5.57e-13 68.2
MsG0480020173.01.T01 AT4G25560 65.909 44 15 0 71 114 3 46 1.75e-12 65.1
MsG0480020173.01.T01 AT5G59780 51.020 49 24 0 71 119 2 50 2.20e-12 63.9
MsG0480020173.01.T01 AT3G18100 34.021 97 63 1 12 108 544 639 2.36e-12 66.6
MsG0480020173.01.T01 AT3G18100 34.021 97 63 1 12 108 331 426 2.80e-12 66.2
MsG0480020173.01.T01 AT3G18100 34.021 97 63 1 12 108 496 591 2.83e-12 66.2
MsG0480020173.01.T01 AT3G18100 34.021 97 63 1 12 108 383 478 3.04e-12 66.2
MsG0480020173.01.T01 AT3G46130 51.020 49 24 0 71 119 2 50 6.18e-12 63.2
MsG0480020173.01.T01 AT2G02820 31.683 101 68 1 17 117 33 132 2.70e-11 63.2
MsG0480020173.01.T01 AT2G02820 31.683 101 68 1 17 117 33 132 3.10e-11 62.8
MsG0480020173.01.T01 AT2G02820 31.683 101 68 1 17 117 33 132 3.15e-11 63.2

Find 41 sgRNAs with CRISPR-Local

Find 88 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AACATTGTCTTCTGCCATTA+TGG 0.133872 4:+35576055 None:intergenic
AGAAACATGGTCATTCTAAT+TGG 0.262456 4:-35577455 MsG0480020173.01.T01:CDS
CGTCAACTCCCCAAGCTTGC+AGG 0.320716 4:-35577432 MsG0480020173.01.T01:intron
ACATCAGAGATAGGGATTTC+AGG 0.322596 4:+35576176 None:intergenic
TAGTGGTGGAGGTATCTTCT+AGG 0.327386 4:+35575976 None:intergenic
TGCCATTATGGGGCAGTTGA+TGG 0.349469 4:+35576067 None:intergenic
TAGTTCCCATGTTTAAGATT+TGG 0.354990 4:+35576947 None:intergenic
ACATTGTCTTCTGCCATTAT+GGG 0.355335 4:+35576056 None:intergenic
CCACTGATGTTTCTCTGGAA+AGG 0.380327 4:+35576111 None:intergenic
ATCTTCCACTGATGTTTCTC+TGG 0.388829 4:+35576106 None:intergenic
TTCACTTGATATCTCATTAG+TGG 0.392926 4:+35575959 None:intergenic
TCCTTATCAACATCAGAGAT+AGG 0.398718 4:+35576167 None:intergenic
CACTGATGTTTCTCTGGAAA+GGG 0.401977 4:+35576112 None:intergenic
CTCCATCAACTGCCCCATAA+TGG 0.404724 4:-35576069 MsG0480020173.01.T01:CDS
AAACATGTACCTGCAAGCTT+GGG 0.406464 4:+35577423 None:intergenic
CCCTATCTCTGATGTTGATA+AGG 0.407461 4:-35576168 MsG0480020173.01.T01:CDS
GAAACATGTACCTGCAAGCT+TGG 0.433847 4:+35577422 None:intergenic
TTGATTCCAGACTTCTATGA+TGG 0.449729 4:-35575924 MsG0480020173.01.T01:CDS
ACCACGAGATAAAGAACTAT+TGG 0.463630 4:-35576313 MsG0480020173.01.T01:CDS
TATGAACCATCATAGAAGTC+TGG 0.481873 4:+35575918 None:intergenic
AGGTGCATGGAGTAGAGATG+AGG 0.501985 4:-35577502 MsG0480020173.01.T01:CDS
GAGGTATCTTCTAGGGTGCA+TGG 0.502528 4:+35575984 None:intergenic
TTCAAAGAGCAAAGACTACA+AGG 0.536362 4:-35576270 MsG0480020173.01.T01:CDS
TGATATCTCATTAGTGGTGG+AGG 0.536390 4:+35575965 None:intergenic
AGTGGTGGAGGTATCTTCTA+GGG 0.536504 4:+35575977 None:intergenic
CCTTATCAACATCAGAGATA+GGG 0.539139 4:+35576168 None:intergenic
TATACTTATTTCCATGTCGA+TGG 0.540628 4:+35576888 None:intergenic
GCCAATAGTTCTTTATCTCG+TGG 0.546828 4:+35576312 None:intergenic
ATTACAGGTTTAGCAAGATG+TGG 0.556410 4:-35577007 MsG0480020173.01.T01:intron
CATTGTCTTCTGCCATTATG+GGG 0.556590 4:+35576057 None:intergenic
TAAAGCCAAATCTTAAACAT+GGG 0.567733 4:-35576952 MsG0480020173.01.T01:CDS
ACTTGATATCTCATTAGTGG+TGG 0.574720 4:+35575962 None:intergenic
TTAAAGCCAAATCTTAAACA+TGG 0.576268 4:-35576953 MsG0480020173.01.T01:CDS
GGAGTAGAGATGAGGATACA+AGG 0.600618 4:-35577494 MsG0480020173.01.T01:CDS
ATCAAATTACACCATCGACA+TGG 0.608002 4:-35576899 MsG0480020173.01.T01:CDS
CAGAAGACAATGTTGCTCCA+TGG 0.613537 4:-35576046 MsG0480020173.01.T01:CDS
AGTGATTATATTCAGAAACA+TGG 0.618117 4:-35577468 MsG0480020173.01.T01:CDS
CATTATGGGGCAGTTGATGG+AGG 0.624888 4:+35576070 None:intergenic
ATGGTGTTAAGAAAGGTGCA+TGG 0.631027 4:-35577515 MsG0480020173.01.T01:CDS
AACATGTACCTGCAAGCTTG+GGG 0.636122 4:+35577424 None:intergenic
CCTTTCCAGAGAAACATCAG+TGG 0.704310 4:-35576111 MsG0480020173.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ACCAAAATAATATTTTTTTT+AGG - Chr4:35576900-35576919 MsG0480020173.01.T01:CDS 10.0%
!!! CCAAAATAATATTTTTTTTA+GGG - Chr4:35576901-35576920 MsG0480020173.01.T01:CDS 10.0%
!!! TACTTAGTTTTATATTATTT+TGG + Chr4:35576933-35576952 None:intergenic 10.0%
!! AATTTAAGCTTCATTAATTT+AGG - Chr4:35576373-35576392 MsG0480020173.01.T01:intron 15.0%
!! TTGTTAATATAATTTCGTTA+GGG - Chr4:35576136-35576155 MsG0480020173.01.T01:CDS 15.0%
!! TTTAATAAAATATTACCCAT+TGG - Chr4:35576820-35576839 MsG0480020173.01.T01:intron 15.0%
!!! ATGTTTATAACTTTGTTTTT+TGG - Chr4:35576278-35576297 MsG0480020173.01.T01:CDS 15.0%
!!! CCCTAAAAAAAATATTATTT+TGG + Chr4:35576904-35576923 None:intergenic 15.0%
!!! GACACTTTTTTTATTTTTTA+TGG + Chr4:35576253-35576272 None:intergenic 15.0%
!! AAATAAACAATGTACTCAAT+AGG + Chr4:35576734-35576753 None:intergenic 20.0%
!! CAATTATATTTCTTCTTAGA+TGG - Chr4:35577081-35577100 MsG0480020173.01.T01:intron 20.0%
!! CTTGTTAATATAATTTCGTT+AGG - Chr4:35576135-35576154 MsG0480020173.01.T01:CDS 20.0%
!! TGGAATATAGATTAATTAGA+TGG - Chr4:35576771-35576790 MsG0480020173.01.T01:intron 20.0%
!! TGTTAATATAATTTCGTTAG+GGG - Chr4:35576137-35576156 MsG0480020173.01.T01:CDS 20.0%
!!! TTAGTTTTTGAATCATTTAG+TGG - Chr4:35577428-35577447 MsG0480020173.01.T01:intron 20.0%
!!! TTTATTAAACATTCCAGTTT+TGG + Chr4:35576809-35576828 None:intergenic 20.0%
! AATGATTCAAAAACTAACCA+TGG + Chr4:35577425-35577444 None:intergenic 25.0%
! AGTGATTATATTCAGAAACA+TGG - Chr4:35575983-35576002 MsG0480020173.01.T01:CDS 25.0%
! CTGATTAACGATACTAAAAA+AGG - Chr4:35576185-35576204 MsG0480020173.01.T01:CDS 25.0%
! TAAAGCCAAATCTTAAACAT+GGG - Chr4:35576499-35576518 MsG0480020173.01.T01:intron 25.0%
! TAATTAATTGCATCTCCAAT+GGG + Chr4:35576838-35576857 None:intergenic 25.0%
! TTAAAGCCAAATCTTAAACA+TGG - Chr4:35576498-35576517 MsG0480020173.01.T01:intron 25.0%
! TTAACGATACTAAAAAAGGA+AGG - Chr4:35576189-35576208 MsG0480020173.01.T01:CDS 25.0%
! TTAATTAGGAGACTAACTTA+TGG - Chr4:35576851-35576870 MsG0480020173.01.T01:intron 25.0%
!! AATCATTTAGTGGAGATTTT+TGG - Chr4:35577438-35577457 MsG0480020173.01.T01:CDS 25.0%
!! TTTTAGCAGTATATTAGATG+TGG - Chr4:35576751-35576770 MsG0480020173.01.T01:intron 25.0%
!!! AATCAGTGTTGTTTTATTAC+AGG - Chr4:35576429-35576448 MsG0480020173.01.T01:intron 25.0%
!!! GAAGCTTAAATTCTACTTTT+AGG + Chr4:35576365-35576384 None:intergenic 25.0%
!!! TGCTCTTTGAACATTTTTTT+AGG + Chr4:35577172-35577191 None:intergenic 25.0%
AGAAACATGGTCATTCTAAT+TGG - Chr4:35575996-35576015 MsG0480020173.01.T01:CDS 30.0%
CATTGGAGATGCAATTAATT+AGG - Chr4:35576837-35576856 MsG0480020173.01.T01:intron 30.0%
CTAATTAATTGCATCTCCAA+TGG + Chr4:35576839-35576858 None:intergenic 30.0%
TATACTTATTTCCATGTCGA+TGG + Chr4:35576566-35576585 None:intergenic 30.0%
TTCACTTGATATCTCATTAG+TGG + Chr4:35577495-35577514 None:intergenic 30.0%
! CTAGCTGTTGATTAATTGAA+AGG - Chr4:35576956-35576975 MsG0480020173.01.T01:CDS 30.0%
! GACAAAAATGGTGTTAAGAA+AGG - Chr4:35575929-35575948 MsG0480020173.01.T01:CDS 30.0%
! TAGTTCCCATGTTTAAGATT+TGG + Chr4:35576507-35576526 None:intergenic 30.0%
! TTTTCTTCAACAGTATCACA+TGG + Chr4:35577233-35577252 None:intergenic 30.0%
!! ACACCATTTTTGTCATAGAA+AGG + Chr4:35575923-35575942 None:intergenic 30.0%
!! CTTAAATTCTACTTTTAGGC+GGG + Chr4:35576361-35576380 None:intergenic 30.0%
!! GCTTAAATTCTACTTTTAGG+CGG + Chr4:35576362-35576381 None:intergenic 30.0%
AACATTGTCTTCTGCCATTA+TGG + Chr4:35577399-35577418 None:intergenic 35.0%
ACATTGTCTTCTGCCATTAT+GGG + Chr4:35577398-35577417 None:intergenic 35.0%
ACCACGAGATAAAGAACTAT+TGG - Chr4:35577138-35577157 MsG0480020173.01.T01:intron 35.0%
ACTTGATATCTCATTAGTGG+TGG + Chr4:35577492-35577511 None:intergenic 35.0%
AGTATCGTTAATCAGTGTCT+TGG + Chr4:35576180-35576199 None:intergenic 35.0%
ATCAAATTACACCATCGACA+TGG - Chr4:35576552-35576571 MsG0480020173.01.T01:intron 35.0%
ATTACAGGTTTAGCAAGATG+TGG - Chr4:35576444-35576463 MsG0480020173.01.T01:intron 35.0%
CCTTATCAACATCAGAGATA+GGG + Chr4:35577286-35577305 None:intergenic 35.0%
CGGGATATTCATAACGAAAA+GGG + Chr4:35576342-35576361 None:intergenic 35.0%
GCTCCTTTCTATGACAAAAA+TGG - Chr4:35575917-35575936 MsG0480020173.01.T01:CDS 35.0%
GTGAGATAAAGAACCAAAAC+TGG - Chr4:35576793-35576812 MsG0480020173.01.T01:intron 35.0%
TAACCAGTATCTTGAAGCAA+CGG - Chr4:35576307-35576326 MsG0480020173.01.T01:CDS 35.0%
TATGAACCATCATAGAAGTC+TGG + Chr4:35577536-35577555 None:intergenic 35.0%
TCCTTATCAACATCAGAGAT+AGG + Chr4:35577287-35577306 None:intergenic 35.0%
TGAAAAACTGCCTGGAAAAA+CGG - Chr4:35577115-35577134 MsG0480020173.01.T01:intron 35.0%
TTCAAAGAGCAAAGACTACA+AGG - Chr4:35577181-35577200 MsG0480020173.01.T01:intron 35.0%
TTGATTCCAGACTTCTATGA+TGG - Chr4:35577527-35577546 MsG0480020173.01.T01:CDS 35.0%
! TTGCTTCAAGATACTGGTTA+AGG + Chr4:35576307-35576326 None:intergenic 35.0%
AAACATGTACCTGCAAGCTT+GGG + Chr4:35576031-35576050 None:intergenic 40.0%
ACATCAGAGATAGGGATTTC+AGG + Chr4:35577278-35577297 None:intergenic 40.0%
ATCTTCCACTGATGTTTCTC+TGG + Chr4:35577348-35577367 None:intergenic 40.0%
CATTGTCTTCTGCCATTATG+GGG + Chr4:35577397-35577416 None:intergenic 40.0%
CCCTATCTCTGATGTTGATA+AGG - Chr4:35577283-35577302 MsG0480020173.01.T01:intron 40.0%
GAAAAAGTTGCAGACTTCGT+TGG - Chr4:35576466-35576485 MsG0480020173.01.T01:intron 40.0%
GCCAATAGTTCTTTATCTCG+TGG + Chr4:35577142-35577161 None:intergenic 40.0%
GCGGGATATTCATAACGAAA+AGG + Chr4:35576343-35576362 None:intergenic 40.0%
TAACCGTTGCTTCAAGATAC+TGG + Chr4:35576313-35576332 None:intergenic 40.0%
TGATATCTCATTAGTGGTGG+AGG + Chr4:35577489-35577508 None:intergenic 40.0%
TTGATTGCTGAAAAACTGCC+TGG - Chr4:35577107-35577126 MsG0480020173.01.T01:intron 40.0%
! ATGGTGTTAAGAAAGGTGCA+TGG - Chr4:35575936-35575955 MsG0480020173.01.T01:CDS 40.0%
! CACTGATGTTTCTCTGGAAA+GGG + Chr4:35577342-35577361 None:intergenic 40.0%
AACATGTACCTGCAAGCTTG+GGG + Chr4:35576030-35576049 None:intergenic 45.0%
CAGAAGACAATGTTGCTCCA+TGG - Chr4:35577405-35577424 MsG0480020173.01.T01:intron 45.0%
CCTTTCCAGAGAAACATCAG+TGG - Chr4:35577340-35577359 MsG0480020173.01.T01:intron 45.0%
GAAACATGTACCTGCAAGCT+TGG + Chr4:35576032-35576051 None:intergenic 45.0%
GGAGTAGAGATGAGGATACA+AGG - Chr4:35575957-35575976 MsG0480020173.01.T01:CDS 45.0%
TCGTTAGGGGAAATGCTAGT+TGG - Chr4:35576150-35576169 MsG0480020173.01.T01:CDS 45.0%
! CCACTGATGTTTCTCTGGAA+AGG + Chr4:35577343-35577362 None:intergenic 45.0%
!! AGTGGTGGAGGTATCTTCTA+GGG + Chr4:35577477-35577496 None:intergenic 45.0%
!! TAGTGGTGGAGGTATCTTCT+AGG + Chr4:35577478-35577497 None:intergenic 45.0%
AGGTGCATGGAGTAGAGATG+AGG - Chr4:35575949-35575968 MsG0480020173.01.T01:CDS 50.0%
CTCCATCAACTGCCCCATAA+TGG - Chr4:35577382-35577401 MsG0480020173.01.T01:intron 50.0%
TGCCATTATGGGGCAGTTGA+TGG + Chr4:35577387-35577406 None:intergenic 50.0%
!! ATCTCGTGGTCCGTTTTTCC+AGG + Chr4:35577128-35577147 None:intergenic 50.0%
!! CATTATGGGGCAGTTGATGG+AGG + Chr4:35577384-35577403 None:intergenic 50.0%
!! GAGGTATCTTCTAGGGTGCA+TGG + Chr4:35577470-35577489 None:intergenic 50.0%
CGTCAACTCCCCAAGCTTGC+AGG - Chr4:35576019-35576038 MsG0480020173.01.T01:CDS 60.0%
Chromosome Type Strat End Strand Name
Chr4 gene 35575908 35577565 35575908 ID=MsG0480020173.01;Name=MsG0480020173.01
Chr4 mRNA 35575908 35577565 35575908 ID=MsG0480020173.01.T01;Parent=MsG0480020173.01;Name=MsG0480020173.01.T01;_AED=0.06;_eAED=0.06;_QI=0|0|0|1|1|1|3|0|242
Chr4 exon 35577433 35577565 35577433 ID=MsG0480020173.01.T01:exon:4488;Parent=MsG0480020173.01.T01
Chr4 exon 35576893 35577022 35576893 ID=MsG0480020173.01.T01:exon:4489;Parent=MsG0480020173.01.T01
Chr4 exon 35575908 35576373 35575908 ID=MsG0480020173.01.T01:exon:4490;Parent=MsG0480020173.01.T01
Chr4 CDS 35577433 35577565 35577433 ID=MsG0480020173.01.T01:cds;Parent=MsG0480020173.01.T01
Chr4 CDS 35576893 35577022 35576893 ID=MsG0480020173.01.T01:cds;Parent=MsG0480020173.01.T01
Chr4 CDS 35575908 35576373 35575908 ID=MsG0480020173.01.T01:cds;Parent=MsG0480020173.01.T01
Gene Sequence

>MsG0480020173.01.T01

ATGGTAAGAGCTCCTTTCTATGACAAAAATGGTGTTAAGAAAGGTGCATGGAGTAGAGATGAGGATACAAGGTTAAGTGATTATATTCAGAAACATGGTCATTCTAATTGGCGTCAACTCCCCAAGCTTGCAGGTTTAGCAAGATGTGGAAAAAGTTGCAGACTTCGTTGGTTGAATTACTTAAAGCCAAATCTTAAACATGGGAACTACACAAGCGAAGAAGAAGAAATTATCATCAAATTACACCATCGACATGGAAATAAATGGTCATTGATTGCTGAAAAACTGCCTGGAAAAACGGACCACGAGATAAAGAACTATTGGCATAGTTACCTAAAAAAATGTTCAAAGAGCAAAGACTACAAGGACACAATTTCTGAGTTGATATATAAACCATGTGATACTGTTGAAGAAAATGACACTGATCATTTTGTAACACCTGAAATCCCTATCTCTGATGTTGATAAGGACTTTCATTATATTTTAGAAAGCTCAACAATAACCCTTTCCAGAGAAACATCAGTGGAAGATAAATCTTTAACTGCCTCCATCAACTGCCCCATAATGGCAGAAGACAATGTTGCTCCATGGTTAGTTTTTGAATCATTTAGTGGAGATTTTTGGACTGATCCATGCACCCTAGAAGATACCTCCACCACTAATGAGATATCAAGTGAAGACATAGACTTCTTGATTCCAGACTTCTATGATGGTTCATATATGTTTTAG

Protein sequence

>MsG0480020173.01.T01

MVRAPFYDKNGVKKGAWSRDEDTRLSDYIQKHGHSNWRQLPKLAGLARCGKSCRLRWLNYLKPNLKHGNYTSEEEEIIIKLHHRHGNKWSLIAEKLPGKTDHEIKNYWHSYLKKCSKSKDYKDTISELIYKPCDTVEENDTDHFVTPEIPISDVDKDFHYILESSTITLSRETSVEDKSLTASINCPIMAEDNVAPWLVFESFSGDFWTDPCTLEDTSTTNEISSEDIDFLIPDFYDGSYMF*