AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0480020443.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480020443.01.T01 MTR_4g051605 59.036 166 34 3 170 301 718 883 5.75e-48 172
MsG0480020443.01.T01 MTR_4g051605 83.616 177 27 2 4 179 434 609 1.33e-38 145
MsG0480020443.01.T01 MTR_2g087230 53.614 166 43 3 170 301 708 873 9.64e-39 145
MsG0480020443.01.T01 MTR_7g106210 50.000 168 50 3 168 301 697 864 1.37e-38 145
MsG0480020443.01.T01 MTR_8g106100 45.238 168 58 2 168 301 678 845 8.99e-33 128
MsG0480020443.01.T01 MTR_3g084510 47.337 169 49 4 170 301 688 853 1.82e-32 127
MsG0480020443.01.T01 MTR_5g077430 44.706 170 52 5 170 301 695 860 1.29e-30 122
MsG0480020443.01.T01 MTR_8g083240 44.828 174 56 4 165 301 667 837 1.69e-29 119
MsG0480020443.01.T01 MTR_1g033000 40.237 169 67 2 167 301 678 846 3.98e-28 114
MsG0480020443.01.T01 MTR_1g033040 41.618 173 58 5 168 301 681 849 5.00e-28 114
MsG0480020443.01.T01 MTR_1g033010 40.462 173 61 5 167 301 673 841 8.72e-26 108
MsG0480020443.01.T01 MTR_1g066950 66.667 60 19 1 162 221 691 749 2.26e-14 74.3
MsG0480020443.01.T01 MTR_5g086120 50.769 65 32 0 162 226 392 456 1.05e-13 72.0
MsG0480020443.01.T01 MTR_7g100630 63.333 60 21 1 162 221 697 755 1.52e-13 71.6
MsG0480020443.01.T01 MTR_4g115630 56.897 58 25 0 164 221 309 366 1.57e-13 71.2
MsG0480020443.01.T01 MTR_5g086080 53.731 67 28 1 154 220 226 289 1.68e-13 70.9
MsG0480020443.01.T01 MTR_7g115300 55.000 60 27 0 160 219 617 676 1.95e-13 71.2
MsG0480020443.01.T01 MTR_7g061220 63.333 60 21 1 162 221 191 249 2.51e-13 70.9
MsG0480020443.01.T01 MTR_6g006200 44.355 124 51 5 108 220 31 147 2.95e-13 67.0
MsG0480020443.01.T01 MTR_8g070910 40.777 103 49 1 118 220 334 424 4.17e-13 70.1
MsG0480020443.01.T01 MTR_1g010260 33.516 182 99 5 129 300 492 661 4.50e-13 70.1
MsG0480020443.01.T01 MTR_5g033490 56.604 53 23 0 170 222 406 458 4.87e-13 70.1
MsG0480020443.01.T01 MTR_5g086090 52.239 67 29 1 154 220 386 449 5.26e-13 69.7
MsG0480020443.01.T01 MTR_5g086330 46.479 71 38 0 170 240 43 113 6.45e-13 67.8
MsG0480020443.01.T01 MTR_5g079540 61.224 49 18 1 170 217 158 206 7.63e-13 68.6
MsG0480020443.01.T01 MTR_1g010240 32.222 180 104 3 129 300 406 575 8.10e-13 69.3
MsG0480020443.01.T01 MTR_2g024290 46.479 71 38 0 170 240 411 481 8.31e-13 68.9
MsG0480020443.01.T01 MTR_5g086130 35.075 134 79 2 170 301 415 542 9.12e-13 68.9
MsG0480020443.01.T01 MTR_3g464080 32.044 181 68 7 167 301 600 771 9.32e-13 69.3
MsG0480020443.01.T01 MTR_7g058810 63.462 52 19 0 170 221 194 245 9.34e-13 68.9
MsG0480020443.01.T01 MTR_5g086130 34.328 134 80 2 170 301 413 540 9.44e-13 68.9
MsG0480020443.01.T01 MTR_5g082630 58.182 55 23 0 167 221 601 655 9.50e-13 69.3
MsG0480020443.01.T01 MTR_4g035180 56.897 58 25 0 160 217 535 592 1.18e-12 68.9
MsG0480020443.01.T01 MTR_2g024290 46.479 71 38 0 170 240 411 481 1.26e-12 68.6
MsG0480020443.01.T01 MTR_6g007690 49.231 65 32 1 159 223 156 219 1.62e-12 67.8
MsG0480020443.01.T01 MTR_3g086120 63.462 52 19 0 170 221 707 758 1.83e-12 68.6
MsG0480020443.01.T01 MTR_8g015150 27.354 223 104 6 118 301 373 576 1.84e-12 68.2
MsG0480020443.01.T01 MTR_8g015150 27.354 223 104 6 118 301 618 821 1.86e-12 68.2
MsG0480020443.01.T01 MTR_3g086120 63.462 52 19 0 170 221 707 758 1.90e-12 68.2
MsG0480020443.01.T01 MTR_8g014500 56.863 51 22 0 170 220 454 504 2.13e-12 67.8
MsG0480020443.01.T01 MTR_8g014500 56.863 51 22 0 170 220 454 504 2.37e-12 67.8
MsG0480020443.01.T01 MTR_1g080740 53.333 60 28 0 160 219 612 671 2.73e-12 67.8
MsG0480020443.01.T01 MTR_5g058090 55.357 56 25 0 164 219 677 732 2.73e-12 67.8
MsG0480020443.01.T01 MTR_2g084120 34.337 166 73 6 170 300 197 361 3.06e-12 67.0
MsG0480020443.01.T01 MTR_2g100450 35.577 104 55 1 117 220 426 517 3.11e-12 67.4
MsG0480020443.01.T01 MTR_8g014500 56.863 51 22 0 170 220 454 504 3.14e-12 67.4
MsG0480020443.01.T01 MTR_7g015390 51.471 68 30 1 154 221 618 682 3.21e-12 67.8
MsG0480020443.01.T01 MTR_5g086540 51.786 56 27 0 165 220 362 417 3.32e-12 67.4
MsG0480020443.01.T01 MTR_2g100450 35.577 104 55 1 117 220 631 722 3.47e-12 67.4
MsG0480020443.01.T01 MTR_6g015805 54.386 57 26 0 167 223 631 687 3.62e-12 67.4
MsG0480020443.01.T01 MTR_3g070800 62.745 51 19 0 167 217 580 630 3.84e-12 67.4
MsG0480020443.01.T01 MTR_2g100450 35.577 104 55 1 117 220 631 722 4.13e-12 67.4
MsG0480020443.01.T01 MTR_7g015310 59.259 54 22 0 168 221 621 674 4.19e-12 67.4
MsG0480020443.01.T01 MTR_3g462390 31.613 155 79 4 83 221 135 278 4.75e-12 66.6
MsG0480020443.01.T01 MTR_2g080220 59.615 52 21 0 168 219 598 649 4.98e-12 67.0
MsG0480020443.01.T01 MTR_3g462390 31.613 155 79 4 83 221 23 166 5.29e-12 66.2
MsG0480020443.01.T01 MTR_8g074920 52.459 61 29 0 159 219 167 227 5.41e-12 66.2
MsG0480020443.01.T01 MTR_8g016330 61.538 52 20 0 170 221 564 615 5.63e-12 67.0
MsG0480020443.01.T01 MTR_4g111925 58.491 53 22 0 167 219 637 689 6.02e-12 66.6
MsG0480020443.01.T01 MTR_8g015340 36.893 103 55 2 117 219 654 746 6.10e-12 66.6
MsG0480020443.01.T01 MTR_1g020060 55.556 54 24 0 168 221 148 201 6.54e-12 65.9
MsG0480020443.01.T01 MTR_7g073660 58.491 53 22 0 167 219 637 689 6.55e-12 66.6
MsG0480020443.01.T01 MTR_5g086030 52.239 67 29 1 154 220 420 483 6.58e-12 66.6
MsG0480020443.01.T01 MTR_1g086870 59.615 52 21 0 170 221 388 439 7.10e-12 66.2
MsG0480020443.01.T01 MTR_2g082430 33.750 160 73 5 170 300 210 365 8.47e-12 65.9
MsG0480020443.01.T01 MTR_8g064690 49.254 67 32 1 155 221 396 460 8.76e-12 66.2
MsG0480020443.01.T01 MTR_8g070880 55.556 63 28 0 158 220 715 777 1.04e-11 66.2
MsG0480020443.01.T01 MTR_4g109010 50.000 68 31 1 152 219 620 684 1.09e-11 66.2
MsG0480020443.01.T01 MTR_3g007510 47.887 71 36 1 151 221 601 670 1.23e-11 65.9
MsG0480020443.01.T01 MTR_3g007510 47.887 71 36 1 151 221 598 667 1.28e-11 65.9
MsG0480020443.01.T01 MTR_3g007510 47.887 71 36 1 151 221 597 666 1.29e-11 65.9
MsG0480020443.01.T01 MTR_6g090615 34.286 105 57 1 118 222 629 721 1.31e-11 65.9
MsG0480020443.01.T01 MTR_5g086040 59.615 52 21 0 170 221 126 177 1.46e-11 64.7
MsG0480020443.01.T01 MTR_5g086040 59.615 52 21 0 170 221 423 474 1.49e-11 65.5
MsG0480020443.01.T01 MTR_5g086040 56.140 57 25 0 170 226 385 441 1.76e-11 65.1
MsG0480020443.01.T01 MTR_5g086040 56.140 57 25 0 170 226 233 289 1.79e-11 64.7
MsG0480020443.01.T01 MTR_6g016040 30.769 234 106 9 33 223 46 266 1.91e-11 64.7
MsG0480020443.01.T01 MTR_4g133920 47.500 80 39 1 142 221 111 187 2.10e-11 64.3
MsG0480020443.01.T01 MTR_5g082380 47.761 67 35 0 154 220 49 115 2.22e-11 63.5
MsG0480020443.01.T01 MTR_2g095920 57.692 52 22 0 170 221 305 356 2.27e-11 64.7
MsG0480020443.01.T01 MTR_5g068260 50.847 59 29 0 162 220 425 483 2.40e-11 64.7
MsG0480020443.01.T01 MTR_2g072740 57.692 52 22 0 168 219 104 155 2.43e-11 63.2
MsG0480020443.01.T01 MTR_7g015240 57.407 54 23 0 168 221 618 671 2.67e-11 64.7
MsG0480020443.01.T01 MTR_1g086230 33.654 104 64 1 114 217 237 335 2.93e-11 64.3
MsG0480020443.01.T01 MTR_1g027580 32.738 168 75 4 168 300 509 673 3.14e-11 64.7
MsG0480020443.01.T01 MTR_5g030920 53.333 60 28 0 162 221 688 747 3.26e-11 64.7
MsG0480020443.01.T01 MTR_5g030920 53.333 60 28 0 162 221 665 724 3.36e-11 64.7
MsG0480020443.01.T01 MTR_1g116520 39.080 87 44 2 135 217 143 224 3.39e-11 63.9
MsG0480020443.01.T01 MTR_7g109670 57.692 52 22 0 170 221 482 533 3.79e-11 64.3
MsG0480020443.01.T01 MTR_8g015010 26.009 223 107 6 118 301 673 876 4.32e-11 64.3
MsG0480020443.01.T01 MTR_3g080050 50.877 57 28 0 170 226 415 471 4.39e-11 63.9
MsG0480020443.01.T01 MTR_2g104790 62.500 48 18 0 170 217 221 268 4.49e-11 63.5
MsG0480020443.01.T01 MTR_1g116520 39.080 87 44 2 135 217 184 265 4.74e-11 63.5
MsG0480020443.01.T01 MTR_1g027570 32.738 168 75 4 168 300 509 673 5.41e-11 63.9
MsG0480020443.01.T01 MTR_8g015100 28.877 187 83 5 154 301 349 524 5.62e-11 63.5
MsG0480020443.01.T01 MTR_4g092070 55.932 59 26 0 159 217 205 263 5.98e-11 63.2
MsG0480020443.01.T01 MTR_8g015100 51.562 64 27 1 154 217 566 625 6.91e-11 63.5
MsG0480020443.01.T01 MTR_2g095950 55.556 54 24 0 170 223 160 213 6.91e-11 62.8
MsG0480020443.01.T01 MTR_2g095880 55.769 52 23 0 170 221 192 243 8.01e-11 62.8
MsG0480020443.01.T01 MTR_2g095880 55.769 52 23 0 170 221 192 243 8.20e-11 62.4
MsG0480020443.01.T01 MTR_1g027670 33.149 181 85 5 154 300 137 315 9.45e-11 62.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480020443.01.T01 AT3G23750 46.552 174 53 4 165 301 676 846 1.29e-33 130
MsG0480020443.01.T01 AT1G66150 41.143 175 62 4 165 301 686 857 3.85e-29 117
MsG0480020443.01.T01 AT1G24650 43.373 166 60 3 170 301 650 815 1.32e-28 116
MsG0480020443.01.T01 AT2G01820 88.462 52 6 0 170 221 688 739 6.11e-23 99.8
MsG0480020443.01.T01 AT5G15730 33.133 166 88 6 158 300 201 366 3.52e-14 73.2
MsG0480020443.01.T01 AT5G15730 33.133 166 88 6 158 300 201 366 3.52e-14 73.2
MsG0480020443.01.T01 AT2G37050 63.333 60 21 1 162 221 696 754 1.44e-13 71.6
MsG0480020443.01.T01 AT2G37050 63.333 60 21 1 162 221 697 755 1.49e-13 71.6
MsG0480020443.01.T01 AT5G15730 33.125 160 84 6 164 300 205 364 4.28e-13 69.7
MsG0480020443.01.T01 AT1G51940 58.824 51 21 0 170 220 438 488 1.36e-12 68.6
MsG0480020443.01.T01 AT5G28680 60.377 53 21 0 167 219 616 668 1.37e-12 68.9
MsG0480020443.01.T01 AT5G28680 60.377 53 21 0 167 219 616 668 1.37e-12 68.9
MsG0480020443.01.T01 AT5G48740 33.129 163 77 4 170 300 706 868 1.59e-12 68.6
MsG0480020443.01.T01 AT5G11020 52.239 67 31 1 151 217 222 287 2.45e-12 67.4
MsG0480020443.01.T01 AT3G45860 55.556 54 24 0 170 223 450 503 3.03e-12 67.8
MsG0480020443.01.T01 AT5G11020 52.239 67 31 1 151 217 188 253 3.07e-12 67.0
MsG0480020443.01.T01 AT5G11020 52.239 67 31 1 151 217 184 249 3.15e-12 67.0
MsG0480020443.01.T01 AT3G55950 64.706 51 18 0 167 217 602 652 3.30e-12 67.8
MsG0480020443.01.T01 AT5G11020 52.239 67 31 1 151 217 161 226 3.41e-12 67.0
MsG0480020443.01.T01 AT5G54590 51.948 77 29 2 141 217 190 258 3.46e-12 67.0
MsG0480020443.01.T01 AT5G54590 51.948 77 29 2 141 217 190 258 3.46e-12 67.0
MsG0480020443.01.T01 AT5G54590 51.948 77 29 2 141 217 190 258 3.46e-12 67.0
MsG0480020443.01.T01 AT3G04690 58.491 53 22 0 167 219 612 664 3.53e-12 67.4
MsG0480020443.01.T01 AT1G79620 42.222 90 40 1 131 220 709 786 3.57e-12 67.4
MsG0480020443.01.T01 AT1G79620 42.222 90 40 1 131 220 735 812 3.86e-12 67.4
MsG0480020443.01.T01 AT1G79620 42.222 90 40 1 131 220 709 786 4.20e-12 67.4
MsG0480020443.01.T01 AT5G38990 54.545 55 25 0 167 221 624 678 4.69e-12 67.0
MsG0480020443.01.T01 AT3G51550 58.491 53 22 0 167 219 632 684 4.76e-12 67.0
MsG0480020443.01.T01 AT1G07550 38.000 100 51 1 118 217 617 705 5.02e-12 67.0
MsG0480020443.01.T01 AT2G25220 66.667 48 16 0 170 217 245 292 5.78e-12 66.2
MsG0480020443.01.T01 AT2G25220 66.667 48 16 0 170 217 245 292 6.01e-12 66.2
MsG0480020443.01.T01 AT4G00340 35.772 123 70 3 161 275 551 672 6.03e-12 66.6
MsG0480020443.01.T01 AT2G25220 66.667 48 16 0 170 217 250 297 6.07e-12 66.2
MsG0480020443.01.T01 AT3G58690 31.111 180 88 5 156 300 176 354 6.20e-12 66.2
MsG0480020443.01.T01 AT2G25220 66.667 48 16 0 170 217 196 243 6.52e-12 66.2
MsG0480020443.01.T01 AT4G00340 35.772 123 70 3 161 275 572 693 6.79e-12 66.6
MsG0480020443.01.T01 AT2G11520 58.000 50 21 0 170 219 324 373 7.01e-12 66.2
MsG0480020443.01.T01 AT3G46370 37.000 100 52 1 118 217 545 633 7.29e-12 66.6
MsG0480020443.01.T01 AT3G46370 37.000 100 52 1 118 217 545 633 7.29e-12 66.6
MsG0480020443.01.T01 AT2G25220 66.667 48 16 0 170 217 245 292 7.51e-12 66.2
MsG0480020443.01.T01 AT4G29180 35.577 104 55 1 117 220 637 728 8.26e-12 66.6
MsG0480020443.01.T01 AT4G29180 35.577 104 55 1 117 220 634 725 8.33e-12 66.2
MsG0480020443.01.T01 AT2G25220 66.667 48 16 0 170 217 196 243 8.43e-12 65.9
MsG0480020443.01.T01 AT1G67720 32.961 179 85 6 155 300 691 867 8.53e-12 66.2
MsG0480020443.01.T01 AT5G61350 52.239 67 32 0 157 223 616 682 9.33e-12 66.2
MsG0480020443.01.T01 AT4G29180 35.577 104 55 1 117 220 635 726 9.55e-12 66.2
MsG0480020443.01.T01 AT4G00330 56.364 55 24 0 167 221 218 272 1.07e-11 65.5
MsG0480020443.01.T01 AT4G00330 56.364 55 24 0 167 221 218 272 1.07e-11 65.5
MsG0480020443.01.T01 AT5G54380 57.692 52 22 0 168 219 606 657 1.08e-11 66.2
MsG0480020443.01.T01 AT3G21630 52.632 57 27 0 170 226 415 471 1.12e-11 65.9
MsG0480020443.01.T01 AT1G05700 46.774 62 33 0 158 219 655 716 1.13e-11 65.9
MsG0480020443.01.T01 AT1G05700 46.774 62 33 0 158 219 686 747 1.28e-11 65.9
MsG0480020443.01.T01 AT5G49760 40.625 96 45 1 125 220 696 779 1.30e-11 65.9
MsG0480020443.01.T01 AT3G46400 37.000 100 52 1 118 217 634 722 1.40e-11 65.9
MsG0480020443.01.T01 AT5G39000 52.727 55 26 0 167 221 617 671 1.50e-11 65.5
MsG0480020443.01.T01 AT4G32000 64.583 48 17 0 170 217 229 276 1.76e-11 64.7
MsG0480020443.01.T01 AT3G62220 34.343 99 60 1 119 217 34 127 1.86e-11 63.9
MsG0480020443.01.T01 AT3G46410 52.727 55 26 0 163 217 79 133 1.96e-11 63.9
MsG0480020443.01.T01 AT4G32000 64.583 48 17 0 170 217 228 275 2.04e-11 64.7
MsG0480020443.01.T01 AT4G32000 64.583 48 17 0 170 217 229 276 2.07e-11 64.7
MsG0480020443.01.T01 AT4G02010 57.692 52 22 0 170 221 482 533 2.12e-11 65.1
MsG0480020443.01.T01 AT4G32000 64.583 48 17 0 170 217 271 318 2.22e-11 64.7
MsG0480020443.01.T01 AT3G46340 38.235 102 52 1 118 219 644 734 2.35e-11 65.1
MsG0480020443.01.T01 AT5G18610 59.615 52 21 0 170 221 184 235 2.64e-11 64.7
MsG0480020443.01.T01 AT5G18610 59.615 52 21 0 170 221 184 235 2.64e-11 64.7
MsG0480020443.01.T01 AT5G18610 59.615 52 21 0 170 221 184 235 2.64e-11 64.7
MsG0480020443.01.T01 AT4G13190 59.615 52 21 0 170 221 25 76 3.01e-11 62.8
MsG0480020443.01.T01 AT4G13190 59.615 52 21 0 170 221 25 76 3.01e-11 62.8
MsG0480020443.01.T01 AT1G66930 34.545 110 60 1 118 227 613 710 3.17e-11 64.7
MsG0480020443.01.T01 AT5G47850 59.259 54 22 0 168 221 551 604 3.68e-11 64.3
MsG0480020443.01.T01 AT4G29450 30.822 146 86 3 158 295 664 802 3.98e-11 64.3
MsG0480020443.01.T01 AT3G62220 34.343 99 60 1 119 217 127 220 4.62e-11 63.5
MsG0480020443.01.T01 AT3G62220 34.343 99 60 1 119 217 127 220 4.62e-11 63.5
MsG0480020443.01.T01 AT1G66930 34.545 110 60 1 118 227 404 501 4.68e-11 63.9
MsG0480020443.01.T01 AT1G68690 51.667 60 29 0 162 221 466 525 4.90e-11 63.9
MsG0480020443.01.T01 AT1G77280 42.169 83 42 2 141 223 480 556 5.39e-11 63.9
MsG0480020443.01.T01 AT1G77280 42.169 83 42 2 141 223 480 556 5.39e-11 63.9
MsG0480020443.01.T01 AT2G47060 33.654 104 64 1 114 217 27 125 6.42e-11 62.4
MsG0480020443.01.T01 AT2G47060 33.654 104 64 1 114 217 8 106 6.62e-11 62.0
MsG0480020443.01.T01 AT1G80640 58.333 48 20 0 170 217 249 296 7.47e-11 62.8
MsG0480020443.01.T01 AT4G28490 54.386 57 26 0 170 226 793 849 8.24e-11 63.5
MsG0480020443.01.T01 AT1G80640 58.333 48 20 0 170 217 249 296 8.27e-11 62.8
MsG0480020443.01.T01 AT5G01950 31.148 122 70 2 118 239 684 791 8.57e-11 63.2
MsG0480020443.01.T01 AT4G13190 59.615 52 21 0 170 221 172 223 8.84e-11 62.8
MsG0480020443.01.T01 AT4G29990 45.161 62 34 0 158 219 659 720 8.86e-11 63.2
MsG0480020443.01.T01 AT5G62710 43.243 74 42 0 147 220 355 428 8.88e-11 63.2
MsG0480020443.01.T01 AT4G13190 59.615 52 21 0 170 221 83 134 9.01e-11 62.0
MsG0480020443.01.T01 AT4G29990 45.161 62 34 0 158 219 659 720 9.05e-11 63.2
MsG0480020443.01.T01 AT5G01950 31.148 122 70 2 118 239 599 706 9.61e-11 63.2
MsG0480020443.01.T01 AT5G62710 43.243 74 42 0 147 220 389 462 9.82e-11 62.8

Find 71 sgRNAs with CRISPR-Local

Find 170 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CGAGCTAAAGTTTCTGATTT+TGG 0.115900 4:+41514183 MsG0480020443.01.T01:CDS
TTCGAGTTTGGTTATCAAAA+AGG 0.172948 4:-41513213 None:intergenic
CAAAATGTACCTGCATATTC+AGG 0.219999 4:-41514278 None:intergenic
TCCAAAAGTGATAGTTAAAT+TGG 0.258605 4:+41513588 MsG0480020443.01.T01:CDS
GCCAATTTAACTATCACTTT+TGG 0.263401 4:-41513589 None:intergenic
GTTACTTAGCCGAATGGTTT+TGG 0.295285 4:+41515115 MsG0480020443.01.T01:CDS
GGTGAAGGTGGTTCACTTAC+AGG 0.310528 4:-41513265 None:intergenic
TTTGACTGCATGTCCCTATC+TGG 0.316987 4:-41515272 None:intergenic
ACAAGACTTGCTGGAACATT+TGG 0.325253 4:+41514245 MsG0480020443.01.T01:CDS
TTCAAATACATGATAGCTTT+CGG 0.330182 4:-41513685 None:intergenic
GAACCGGACTTATTCGAGTT+TGG 0.380968 4:-41513225 None:intergenic
CACGGATGGTGAAAAGTCTA+TGG 0.390381 4:+41514220 MsG0480020443.01.T01:CDS
TCTATGGCAACAAGACTTGC+TGG 0.403468 4:+41514236 MsG0480020443.01.T01:CDS
TTCGACATTCCTAGACTGAT+TGG 0.404341 4:-41513374 None:intergenic
TCAATTGTAGCTGAACTTGC+GGG 0.406709 4:+41515218 MsG0480020443.01.T01:CDS
CTTTGTCGATAAGCTCCCTT+TGG 0.408636 4:-41513626 None:intergenic
AAACCATTCGGCTAAGTAAC+GGG 0.424088 4:-41515112 None:intergenic
AGGCAAACCATAGGCCAGAT+AGG 0.425589 4:+41515258 MsG0480020443.01.T01:CDS
GATGGCGGTGGCGTCAGATA+TGG 0.427891 4:-41513301 None:intergenic
AGCTCTCTGGTTAACAATAG+TGG 0.440989 4:+41513658 MsG0480020443.01.T01:CDS
TTTGATTTGCCAAAACCATT+CGG 0.483976 4:-41515124 None:intergenic
GCATGTCCCTATCTGGCCTA+TGG 0.489932 4:-41515265 None:intergenic
GTAAAATATTTGAAGACTTG+AGG 0.501365 4:-41514146 None:intergenic
TTGCGGGACATTGCACTGCT+AGG 0.504313 4:+41515234 MsG0480020443.01.T01:CDS
TTGGAGCTTGAACTTTGCCT+AGG 0.512622 4:-41513355 None:intergenic
TGGAGCTTGAACTTTGCCTA+GGG 0.518581 4:-41513354 None:intergenic
TCGTTATTCCACCTTCCCCT+AGG 0.522735 4:+41513338 MsG0480020443.01.T01:CDS
AAAACAGTAGCAATCGTGGC+TGG 0.524413 4:+41513430 MsG0480020443.01.T01:CDS
GATGGTGATGGCGATGGCGG+TGG 0.529290 4:-41513313 None:intergenic
TTCAATTGTAGCTGAACTTG+CGG 0.529873 4:+41515217 MsG0480020443.01.T01:CDS
AAAATGTACCTGCATATTCA+GGG 0.529943 4:-41514277 None:intergenic
GGGAGCTTATCGACAAAGAC+AGG 0.531368 4:+41513631 MsG0480020443.01.T01:CDS
TATTTGAAGACTTGAGGTCT+CGG 0.536409 4:-41514140 None:intergenic
AGCTATCATGTATTTGAAGC+CGG 0.536968 4:+41513690 MsG0480020443.01.T01:CDS
TAACCAAACTCGAATAAGTC+CGG 0.541263 4:+41513222 MsG0480020443.01.T01:CDS
AAAGACAGGAATAAGCTCTC+TGG 0.542768 4:+41513645 MsG0480020443.01.T01:CDS
GTTCAAGCTCCAATCAGTCT+AGG 0.547403 4:+41513365 MsG0480020443.01.T01:CDS
AAAACCATTCGGCTAAGTAA+CGG 0.552836 4:-41515113 None:intergenic
GGCAAACCATAGGCCAGATA+GGG 0.553321 4:+41515259 MsG0480020443.01.T01:CDS
GGTGGTTCACTTACAGGTGA+TGG 0.562471 4:-41513259 None:intergenic
TACCTTGCCCCTGAATATGC+AGG 0.565731 4:+41514269 MsG0480020443.01.T01:CDS
ATCGTGGCTCAAAGTCAAGA+TGG 0.566157 4:+41513559 MsG0480020443.01.T01:CDS
GGCGGCACGTTGTGTGGTGA+AGG 0.571727 4:-41513280 None:intergenic
CTTGAACTTTGCCTAGGGGA+AGG 0.572123 4:-41513349 None:intergenic
GAACTTTGCCTAGGGGAAGG+TGG 0.580463 4:-41513346 None:intergenic
CAGCGTCGGATAGCACCAAA+GGG 0.583086 4:+41513611 MsG0480020443.01.T01:CDS
GGCGGTGGCGTCAGATATGG+CGG 0.583156 4:-41513298 None:intergenic
TTTGGTGAAACTTGCACGGA+TGG 0.583236 4:+41514206 MsG0480020443.01.T01:CDS
ACGACAGATGGTGATGGCGA+TGG 0.583920 4:-41513319 None:intergenic
TGCGGGACATTGCACTGCTA+GGG 0.585336 4:+41515235 MsG0480020443.01.T01:CDS
GCAGCGTCGGATAGCACCAA+AGG 0.590627 4:+41513610 MsG0480020443.01.T01:CDS
GGGACATTGCACTGCTAGGG+AGG 0.594507 4:+41515238 MsG0480020443.01.T01:CDS
AGATATGGCGGCACGTTGTG+TGG 0.595298 4:-41513286 None:intergenic
TACCTGCATATTCAGGGGCA+AGG 0.595927 4:-41514271 None:intergenic
GAAGGTGGAATAACGACAGA+TGG 0.599162 4:-41513331 None:intergenic
ATTCAAAACAGTAGCAATCG+TGG 0.601272 4:+41513426 MsG0480020443.01.T01:CDS
AAACCCGTTACTTAGCCGAA+TGG 0.602025 4:+41515109 MsG0480020443.01.T01:CDS
CTGCTAGGGAGGCAAACCAT+AGG 0.608278 4:+41515249 MsG0480020443.01.T01:CDS
GATAGTTAAATTGGCAGCGT+CGG 0.613706 4:+41513597 MsG0480020443.01.T01:CDS
GGCACGTTGTGTGGTGAAGG+TGG 0.619146 4:-41513277 None:intergenic
TTATTCGAGTTACTCCGTTG+AGG 0.627257 4:-41513403 None:intergenic
TTGGTTTGGTGAAACTTGCA+CGG 0.640724 4:+41514202 MsG0480020443.01.T01:CDS
GGAATAACGACAGATGGTGA+TGG 0.647089 4:-41513325 None:intergenic
GGATGGTTCTAGCTCTATCG+TGG 0.651763 4:+41513543 MsG0480020443.01.T01:CDS
ATGTCGAATCAAATCCTCAA+CGG 0.653404 4:+41513389 MsG0480020443.01.T01:CDS
ATAGCACTTGATGTTGCTAG+AGG 0.655160 4:+41514075 MsG0480020443.01.T01:CDS
TTGAAGACTTGAGGTCTCGG+TGG 0.657300 4:-41514137 None:intergenic
TCTGTCGTGCAAGAGTGTGA+AGG 0.657736 4:-41514107 None:intergenic
ACAGATGGTGATGGCGATGG+CGG 0.673320 4:-41513316 None:intergenic
AAATGTACCTGCATATTCAG+GGG 0.680185 4:-41514276 None:intergenic
GGAGCTTGAACTTTGCCTAG+GGG 0.688378 4:-41513353 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAAAATTAGGTAACAAA+AGG + Chr4:41514468-41514487 MsG0480020443.01.T01:intron 15.0%
!! ACTGAAATAAATTAATAACT+AGG - Chr4:41514412-41514431 None:intergenic 15.0%
!! CTATTTATGTAAGATATAAA+TGG + Chr4:41514909-41514928 MsG0480020443.01.T01:intron 15.0%
!! CTGAAATAAATTAATAACTA+GGG - Chr4:41514411-41514430 None:intergenic 15.0%
!! TATTAACCTTAAATAAATTG+TGG - Chr4:41514638-41514657 None:intergenic 15.0%
!! TTACATACAATATAACTTAT+TGG - Chr4:41514528-41514547 None:intergenic 15.0%
!!! ATTTAAGGTTAATAAGAAAA+TGG + Chr4:41514644-41514663 MsG0480020443.01.T01:intron 15.0%
!! ATAACACCACAATTTATTTA+AGG + Chr4:41514629-41514648 MsG0480020443.01.T01:intron 20.0%
!! TGAGAAGGAAAAAAAAAATT+AGG + Chr4:41514458-41514477 MsG0480020443.01.T01:intron 20.0%
!!! AAGTCTTCAAATATTTTACT+TGG + Chr4:41514150-41514169 MsG0480020443.01.T01:CDS 20.0%
!!! AGTATTTTACCACAATATAA+AGG + Chr4:41514794-41514813 MsG0480020443.01.T01:intron 20.0%
! AATAAAAAACACTCATTGGA+TGG + Chr4:41513526-41513545 MsG0480020443.01.T01:CDS 25.0%
! ATAACTAGGGATAAATAATG+TGG - Chr4:41514398-41514417 None:intergenic 25.0%
! ATATTCTCAAATTGCAGATA+AGG - Chr4:41514563-41514582 None:intergenic 25.0%
! ATTGTATGTAACATGTTGTT+TGG + Chr4:41514537-41514556 MsG0480020443.01.T01:intron 25.0%
! CACAGAAAATTAGTTATTGT+GGG - Chr4:41514982-41515001 None:intergenic 25.0%
! CTCAACATTGTTATAAATTG+TGG + Chr4:41514686-41514705 MsG0480020443.01.T01:intron 25.0%
! GAAGAATAAAAAACACTCAT+TGG + Chr4:41513522-41513541 MsG0480020443.01.T01:CDS 25.0%
! GTAAAATATTTGAAGACTTG+AGG - Chr4:41514149-41514168 None:intergenic 25.0%
! TAAAATAAAGACATCTGAGA+AGG + Chr4:41514443-41514462 MsG0480020443.01.T01:intron 25.0%
! TCACAGAAAATTAGTTATTG+TGG - Chr4:41514983-41515002 None:intergenic 25.0%
! TCCAAAAGTGATAGTTAAAT+TGG + Chr4:41513588-41513607 MsG0480020443.01.T01:CDS 25.0%
! TTCAAATACATGATAGCTTT+CGG - Chr4:41513688-41513707 None:intergenic 25.0%
! TTGAAGATGGAACAAAAATA+CGG + Chr4:41513817-41513836 MsG0480020443.01.T01:intron 25.0%
!! ACTATGCTTTTATTCTCATT+TGG - Chr4:41514353-41514372 None:intergenic 25.0%
!!! ATTTTGCTTTAAATCACATC+TGG + Chr4:41514295-41514314 MsG0480020443.01.T01:intron 25.0%
!!! TAAAGTTTCTGATTTTGGTT+TGG + Chr4:41514188-41514207 MsG0480020443.01.T01:CDS 25.0%
!!! TTTAACTATCACTTTTGGAT+CGG - Chr4:41513587-41513606 None:intergenic 25.0%
AAAATGTACCTGCATATTCA+GGG - Chr4:41514280-41514299 None:intergenic 30.0%
AATCGGACAAGAAAAACTTA+TGG + Chr4:41515145-41515164 MsG0480020443.01.T01:CDS 30.0%
AATGCAAATCTAGAGATACA+GGG - Chr4:41514889-41514908 None:intergenic 30.0%
AGAAAATTAGTTATTGTGGG+AGG - Chr4:41514979-41514998 None:intergenic 30.0%
CAAAAATACGGTGAAAAGAA+TGG + Chr4:41513829-41513848 MsG0480020443.01.T01:intron 30.0%
CTGTTTCATGATCATAGAAA+AGG - Chr4:41514326-41514345 None:intergenic 30.0%
TCGAGTTTGGTTATCAAAAA+GGG - Chr4:41513215-41513234 None:intergenic 30.0%
TTACAGTTGCAATAATGTTG+CGG - Chr4:41514757-41514776 None:intergenic 30.0%
TTACATTATTTATTCTGCCG+TGG + Chr4:41514587-41514606 MsG0480020443.01.T01:intron 30.0%
TTATATTGTGGTCACAATTG+CGG - Chr4:41514719-41514738 None:intergenic 30.0%
! GAGTTCAGGTTAAAGAATAT+AGG + Chr4:41514852-41514871 MsG0480020443.01.T01:intron 30.0%
! GCCAATTTAACTATCACTTT+TGG - Chr4:41513592-41513611 None:intergenic 30.0%
! TAAGTAGACATCTTTTCCAT+TGG + Chr4:41514007-41514026 MsG0480020443.01.T01:intron 30.0%
! TTCGAGTTTGGTTATCAAAA+AGG - Chr4:41513216-41513235 None:intergenic 30.0%
!! TTTGATTTGCCAAAACCATT+CGG - Chr4:41515127-41515146 None:intergenic 30.0%
!!! ATGGTTTTGGCAAATCAAAT+CGG + Chr4:41515128-41515147 MsG0480020443.01.T01:CDS 30.0%
!!! ATTTTCTGAAGCGAAATTGT+TGG - Chr4:41513754-41513773 None:intergenic 30.0%
AAAACCATTCGGCTAAGTAA+CGG - Chr4:41515116-41515135 None:intergenic 35.0%
AAATGTACCTGCATATTCAG+GGG - Chr4:41514279-41514298 None:intergenic 35.0%
AACTGAGATAACTAGGTTAC+CGG - Chr4:41513712-41513731 None:intergenic 35.0%
ATGTCGAATCAAATCCTCAA+CGG + Chr4:41513389-41513408 MsG0480020443.01.T01:CDS 35.0%
ATTCAAAACAGTAGCAATCG+TGG + Chr4:41513426-41513445 MsG0480020443.01.T01:CDS 35.0%
CAAAATGTACCTGCATATTC+AGG - Chr4:41514281-41514300 None:intergenic 35.0%
CAATTAAAAACCACGAGTTC+AGG + Chr4:41514838-41514857 MsG0480020443.01.T01:intron 35.0%
CATTATTGCAACTGTAACTG+CGG + Chr4:41514760-41514779 MsG0480020443.01.T01:intron 35.0%
CCACAATATAACAGTGTTAG+AGG + Chr4:41514728-41514747 MsG0480020443.01.T01:intron 35.0%
CCATTGGAAAAGCTTGAATT+TGG + Chr4:41514023-41514042 MsG0480020443.01.T01:intron 35.0%
CCTCTAACACTGTTATATTG+TGG - Chr4:41514731-41514750 None:intergenic 35.0%
CGTTGCAAACCTTTATATTG+TGG - Chr4:41514806-41514825 None:intergenic 35.0%
CTAACAAGGATACCAAATGT+CGG - Chr4:41513928-41513947 None:intergenic 35.0%
GAACTTGAACTGAGATAACT+AGG - Chr4:41513719-41513738 None:intergenic 35.0%
GAATGCAAATCTAGAGATAC+AGG - Chr4:41514890-41514909 None:intergenic 35.0%
GTTTATGAATACATGCCTCT+TGG + Chr4:41513979-41513998 MsG0480020443.01.T01:intron 35.0%
TAACCAAACTCGAATAAGTC+CGG + Chr4:41513222-41513241 MsG0480020443.01.T01:CDS 35.0%
TACAAAGGTGAACTTGAAGA+TGG + Chr4:41513804-41513823 MsG0480020443.01.T01:intron 35.0%
TATTCCATTGAAGGAAAGAG+AGG + Chr4:41513950-41513969 MsG0480020443.01.T01:intron 35.0%
TATTCTTTAACCTGAACTCG+TGG - Chr4:41514851-41514870 None:intergenic 35.0%
TATTTGAAGACTTGAGGTCT+CGG - Chr4:41514143-41514162 None:intergenic 35.0%
TGGTAAAATACTGACCAATG+CGG - Chr4:41514786-41514805 None:intergenic 35.0%
TTCAATGGAATAGCCTAACA+AGG - Chr4:41513942-41513961 None:intergenic 35.0%
TTCAATTGTAGCTGAACTTG+CGG + Chr4:41515217-41515236 MsG0480020443.01.T01:CDS 35.0%
TTCGCTTCAGAAAATGAGTT+GGG + Chr4:41513759-41513778 MsG0480020443.01.T01:intron 35.0%
TTGTTAGGCTATTCCATTGA+AGG + Chr4:41513941-41513960 MsG0480020443.01.T01:intron 35.0%
TTTCGCTTCAGAAAATGAGT+TGG + Chr4:41513758-41513777 MsG0480020443.01.T01:intron 35.0%
! AGCTATCATGTATTTGAAGC+CGG + Chr4:41513690-41513709 MsG0480020443.01.T01:CDS 35.0%
! ATTTTCTGTGAGTTTCGTGA+TGG + Chr4:41514992-41515011 MsG0480020443.01.T01:intron 35.0%
! CCAAATTCAAGCTTTTCCAA+TGG - Chr4:41514026-41514045 None:intergenic 35.0%
! CGAGCTAAAGTTTCTGATTT+TGG + Chr4:41514183-41514202 MsG0480020443.01.T01:CDS 35.0%
! TTTTCTGTGAGTTTCGTGAT+GGG + Chr4:41514993-41515012 MsG0480020443.01.T01:intron 35.0%
! TTTTGCATTTGTAGCTGCAT+TGG + Chr4:41513462-41513481 MsG0480020443.01.T01:CDS 35.0%
AAACCATTCGGCTAAGTAAC+GGG - Chr4:41515115-41515134 None:intergenic 40.0%
AAAGACAGGAATAAGCTCTC+TGG + Chr4:41513645-41513664 MsG0480020443.01.T01:CDS 40.0%
AAAGCCTCTCTTTCCTTCAA+TGG - Chr4:41513957-41513976 None:intergenic 40.0%
ACGGTGAAAAGAATGGAATG+TGG + Chr4:41513836-41513855 MsG0480020443.01.T01:intron 40.0%
AGAAATAGCCGTTCTTTCGA+AGG + Chr4:41513895-41513914 MsG0480020443.01.T01:intron 40.0%
AGAATGGAATGTGGAGCTAT+TGG + Chr4:41513845-41513864 MsG0480020443.01.T01:intron 40.0%
AGCTCTCTGGTTAACAATAG+TGG + Chr4:41513658-41513677 MsG0480020443.01.T01:CDS 40.0%
ATAGCACTTGATGTTGCTAG+AGG + Chr4:41514075-41514094 MsG0480020443.01.T01:CDS 40.0%
ATGGGGAAAATCACGACTAA+AGG + Chr4:41515011-41515030 MsG0480020443.01.T01:intron 40.0%
ATGTGGAGCTATTGGAAACA+AGG + Chr4:41513853-41513872 MsG0480020443.01.T01:intron 40.0%
CGACATTTGGTATCCTTGTT+AGG + Chr4:41513926-41513945 MsG0480020443.01.T01:intron 40.0%
CTAAAGGATGTGTTCAGCTA+TGG + Chr4:41515027-41515046 MsG0480020443.01.T01:intron 40.0%
GATAGTTAAATTGGCAGCGT+CGG + Chr4:41513597-41513616 MsG0480020443.01.T01:CDS 40.0%
TCAATTGTAGCTGAACTTGC+GGG + Chr4:41515218-41515237 MsG0480020443.01.T01:CDS 40.0%
TGAATTTGGACCCTTTGTCT+TGG + Chr4:41514037-41514056 MsG0480020443.01.T01:intron 40.0%
TGTGACCAAACACTAATCCA+CGG - Chr4:41514607-41514626 None:intergenic 40.0%
TGTGGAGCTATTGGAAACAA+GGG + Chr4:41513854-41513873 MsG0480020443.01.T01:intron 40.0%
TTCGACATTCCTAGACTGAT+TGG - Chr4:41513377-41513396 None:intergenic 40.0%
TTCGTCAAGAGCCATTAATC+CGG - Chr4:41515076-41515095 None:intergenic 40.0%
TTTCTGTGAGTTTCGTGATG+GGG + Chr4:41514994-41515013 MsG0480020443.01.T01:intron 40.0%
! GGATTTGGAACGGTTTACAA+AGG + Chr4:41513789-41513808 MsG0480020443.01.T01:intron 40.0%
! GTTACTTAGCCGAATGGTTT+TGG + Chr4:41515115-41515134 MsG0480020443.01.T01:CDS 40.0%
! TTATTCGAGTTACTCCGTTG+AGG - Chr4:41513406-41513425 None:intergenic 40.0%
! TTGAAGGAAAGAGAGGCTTT+TGG + Chr4:41513957-41513976 MsG0480020443.01.T01:intron 40.0%
!! ACAAGACTTGCTGGAACATT+TGG + Chr4:41514245-41514264 MsG0480020443.01.T01:CDS 40.0%
!! GATGGACTTTTAACAGGAAC+CGG - Chr4:41513244-41513263 None:intergenic 40.0%
!! TTGGTTTGGTGAAACTTGCA+CGG + Chr4:41514202-41514221 MsG0480020443.01.T01:CDS 40.0%
!!! ACAGGTGATGGACTTTTAAC+AGG - Chr4:41513250-41513269 None:intergenic 40.0%
AAAACAGTAGCAATCGTGGC+TGG + Chr4:41513430-41513449 MsG0480020443.01.T01:CDS 45.0%
AAACCCGTTACTTAGCCGAA+TGG + Chr4:41515109-41515128 MsG0480020443.01.T01:CDS 45.0%
AAACCGTTCCAAATCCACCA+CGG - Chr4:41513785-41513804 None:intergenic 45.0%
ATCGTGGCTCAAAGTCAAGA+TGG + Chr4:41513559-41513578 MsG0480020443.01.T01:CDS 45.0%
CACGGATGGTGAAAAGTCTA+TGG + Chr4:41514220-41514239 MsG0480020443.01.T01:CDS 45.0%
CTTTGTCGATAAGCTCCCTT+TGG - Chr4:41513629-41513648 None:intergenic 45.0%
GAAGGTGGAATAACGACAGA+TGG - Chr4:41513334-41513353 None:intergenic 45.0%
GGAATAACGACAGATGGTGA+TGG - Chr4:41513328-41513347 None:intergenic 45.0%
GTTCAAGCTCCAATCAGTCT+AGG + Chr4:41513365-41513384 MsG0480020443.01.T01:CDS 45.0%
TAGCCGTTCTTTCGAAGGTT+CGG + Chr4:41513900-41513919 MsG0480020443.01.T01:intron 45.0%
TCTATGGCAACAAGACTTGC+TGG + Chr4:41514236-41514255 MsG0480020443.01.T01:CDS 45.0%
TGGAGCTTGAACTTTGCCTA+GGG - Chr4:41513357-41513376 None:intergenic 45.0%
TTGGAGCTTGAACTTTGCCT+AGG - Chr4:41513358-41513377 None:intergenic 45.0%
TTTGACTGCATGTCCCTATC+TGG - Chr4:41515275-41515294 None:intergenic 45.0%
TTTGGTGAAACTTGCACGGA+TGG + Chr4:41514206-41514225 MsG0480020443.01.T01:CDS 45.0%
! GAACCGGACTTATTCGAGTT+TGG - Chr4:41513228-41513247 None:intergenic 45.0%
! GTATTGATGGAACTGCTGAC+CGG + Chr4:41515054-41515073 MsG0480020443.01.T01:intron 45.0%
! TGTCTACTTAGAGCACCAAG+AGG - Chr4:41513997-41514016 None:intergenic 45.0%
!! CAGCTATGGTGTCGTATTGA+TGG + Chr4:41515041-41515060 MsG0480020443.01.T01:intron 45.0%
!! TTCTGCCGTGGATTAGTGTT+TGG + Chr4:41514599-41514618 MsG0480020443.01.T01:intron 45.0%
!!! CTAAGTAACGGGTTTTCCTC+TGG - Chr4:41515104-41515123 None:intergenic 45.0%
ACCCTTTGTCTTGGTCACAG+AGG + Chr4:41514046-41514065 MsG0480020443.01.T01:intron 50.0%
AGCCTCTGTGACCAAGACAA+AGG - Chr4:41514051-41514070 None:intergenic 50.0%
AGGCAAACCATAGGCCAGAT+AGG + Chr4:41515258-41515277 MsG0480020443.01.T01:CDS 50.0%
CTTGAACTTTGCCTAGGGGA+AGG - Chr4:41513352-41513371 None:intergenic 50.0%
GCCTCTGTGACCAAGACAAA+GGG - Chr4:41514050-41514069 None:intergenic 50.0%
GGAACTGCTGACCGGATTAA+TGG + Chr4:41515062-41515081 MsG0480020443.01.T01:intron 50.0%
GGAGCTTGAACTTTGCCTAG+GGG - Chr4:41513356-41513375 None:intergenic 50.0%
GGCAAACCATAGGCCAGATA+GGG + Chr4:41515259-41515278 MsG0480020443.01.T01:CDS 50.0%
GGGAGCTTATCGACAAAGAC+AGG + Chr4:41513631-41513650 MsG0480020443.01.T01:CDS 50.0%
GGTGAAGGTGGTTCACTTAC+AGG - Chr4:41513268-41513287 None:intergenic 50.0%
GGTGGTTCACTTACAGGTGA+TGG - Chr4:41513262-41513281 None:intergenic 50.0%
GTGCCGAACCTTCGAAAGAA+CGG - Chr4:41513906-41513925 None:intergenic 50.0%
TACCTGCATATTCAGGGGCA+AGG - Chr4:41514274-41514293 None:intergenic 50.0%
TACCTTGCCCCTGAATATGC+AGG + Chr4:41514269-41514288 MsG0480020443.01.T01:CDS 50.0%
TCGTTATTCCACCTTCCCCT+AGG + Chr4:41513338-41513357 MsG0480020443.01.T01:CDS 50.0%
TTGAAGACTTGAGGTCTCGG+TGG - Chr4:41514140-41514159 None:intergenic 50.0%
! CTCAGTTCAAGTTCTGCGCA+GGG + Chr4:41513725-41513744 MsG0480020443.01.T01:intron 50.0%
! TCAGAAAATGAGTTGGGCCG+TGG + Chr4:41513765-41513784 MsG0480020443.01.T01:intron 50.0%
! TCTCAGTTCAAGTTCTGCGC+AGG + Chr4:41513724-41513743 MsG0480020443.01.T01:intron 50.0%
! TCTGTCGTGCAAGAGTGTGA+AGG - Chr4:41514110-41514129 None:intergenic 50.0%
!! GGATGGTTCTAGCTCTATCG+TGG + Chr4:41513543-41513562 MsG0480020443.01.T01:CDS 50.0%
AACTGTAACTGCGGCCGCAT+TGG + Chr4:41514769-41514788 MsG0480020443.01.T01:intron 55.0%
AGATATGGCGGCACGTTGTG+TGG - Chr4:41513289-41513308 None:intergenic 55.0%
CTCTTGACGAAAGCGACCAG+AGG + Chr4:41515085-41515104 MsG0480020443.01.T01:intron 55.0%
CTGCTAGGGAGGCAAACCAT+AGG + Chr4:41515249-41515268 MsG0480020443.01.T01:CDS 55.0%
GAACTTTGCCTAGGGGAAGG+TGG - Chr4:41513349-41513368 None:intergenic 55.0%
GCATGTCCCTATCTGGCCTA+TGG - Chr4:41515268-41515287 None:intergenic 55.0%
TGCGGGACATTGCACTGCTA+GGG + Chr4:41515235-41515254 MsG0480020443.01.T01:CDS 55.0%
TTGCGGGACATTGCACTGCT+AGG + Chr4:41515234-41515253 MsG0480020443.01.T01:CDS 55.0%
! CAGCGTCGGATAGCACCAAA+GGG + Chr4:41513611-41513630 MsG0480020443.01.T01:CDS 55.0%
! GAAAATGAGTTGGGCCGTGG+TGG + Chr4:41513768-41513787 MsG0480020443.01.T01:intron 55.0%
!! ACAGATGGTGATGGCGATGG+CGG - Chr4:41513319-41513338 None:intergenic 55.0%
!! ACGACAGATGGTGATGGCGA+TGG - Chr4:41513322-41513341 None:intergenic 55.0%
!! GAAGGTTCGGCACCGACATT+TGG + Chr4:41513913-41513932 MsG0480020443.01.T01:intron 55.0%
GGCACGTTGTGTGGTGAAGG+TGG - Chr4:41513280-41513299 None:intergenic 60.0%
GGGACATTGCACTGCTAGGG+AGG + Chr4:41515238-41515257 MsG0480020443.01.T01:CDS 60.0%
! GATGGCGGTGGCGTCAGATA+TGG - Chr4:41513304-41513323 None:intergenic 60.0%
! GCAGCGTCGGATAGCACCAA+AGG + Chr4:41513610-41513629 MsG0480020443.01.T01:CDS 60.0%
!! GAGTTGGGCCGTGGTGGATT+TGG + Chr4:41513774-41513793 MsG0480020443.01.T01:intron 60.0%
!! GGGCCGTGGTGGATTTGGAA+CGG + Chr4:41513779-41513798 MsG0480020443.01.T01:intron 60.0%
GGCGGCACGTTGTGTGGTGA+AGG - Chr4:41513283-41513302 None:intergenic 65.0%
GGCGGTGGCGTCAGATATGG+CGG - Chr4:41513301-41513320 None:intergenic 65.0%
!! GATGGTGATGGCGATGGCGG+TGG - Chr4:41513316-41513335 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
Chr4 gene 41513205 41515310 41513205 ID=MsG0480020443.01;Name=MsG0480020443.01
Chr4 mRNA 41513205 41515310 41513205 ID=MsG0480020443.01.T01;Parent=MsG0480020443.01;Name=MsG0480020443.01.T01;_AED=0.34;_eAED=0.34;_QI=0|0|0|1|1|1|3|0|311
Chr4 exon 41513205 41513711 41513205 ID=MsG0480020443.01.T01:exon:4951;Parent=MsG0480020443.01.T01
Chr4 exon 41514066 41514290 41514066 ID=MsG0480020443.01.T01:exon:4952;Parent=MsG0480020443.01.T01
Chr4 exon 41515107 41515310 41515107 ID=MsG0480020443.01.T01:exon:4953;Parent=MsG0480020443.01.T01
Chr4 CDS 41513205 41513711 41513205 ID=MsG0480020443.01.T01:cds;Parent=MsG0480020443.01.T01
Chr4 CDS 41514066 41514290 41514066 ID=MsG0480020443.01.T01:cds;Parent=MsG0480020443.01.T01
Chr4 CDS 41515107 41515310 41515107 ID=MsG0480020443.01.T01:cds;Parent=MsG0480020443.01.T01
Gene Sequence

>MsG0480020443.01.T01

ATGGTAACCCTTTTTGATAACCAAACTCGAATAAGTCCGGTTCCTGTTAAAAGTCCATCACCTGTAAGTGAACCACCTTCACCACACAACGTGCCGCCATATCTGACGCCACCGCCATCGCCATCACCATCTGTCGTTATTCCACCTTCCCCTAGGCAAAGTTCAAGCTCCAATCAGTCTAGGAATGTCGAATCAAATCCTCAACGGAGTAACTCGAATAAATTCAAAACAGTAGCAATCGTGGCTGGAGTTGCAGTTTTTGCATTTGTAGCTGCATTGGTTATTTATCTCTTTATATGCTGTTGTGTGAAGAAGAAGAAGAATAAAAAACACTCATTGGATGGTTCTAGCTCTATCGTGGCTCAAAGTCAAGATGGATCCGATCCAAAAGTGATAGTTAAATTGGCAGCGTCGGATAGCACCAAAGGGAGCTTATCGACAAAGACAGGAATAAGCTCTCTGGTTAACAATAGTGGCGAACCGAAAGCTATCATGTATTTGAAGCCGAGGCTTGCAATAGCACTTGATGTTGCTAGAGGAATAGAATACCTTCACACTCTTGCACGACAGACGTTCATCCACCGAGACCTCAAGTCTTCAAATATTTTACTTGGAGATGATACTCGAGCTAAAGTTTCTGATTTTGGTTTGGTGAAACTTGCACGGATGGTGAAAAGTCTATGGCAACAAGACTTGCTGGAACATTTGGATACCTTGCCCCTGAATATGCAGGAAAACCCGTTACTTAGCCGAATGGTTTTGGCAAATCAAATCGGACAAGAAAAACTTATGGCTGCAATCGATCAAACACTTGAAGTAAACGAAGAGACTTTTGAGAGTATTTCAATTGTAGCTGAACTTGCGGGACATTGCACTGCTAGGGAGGCAAACCATAGGCCAGATAGGGACATGCAGTCAAAGTGCTGTCAGAGTTAG
Protein sequence

>MsG0480020443.01.T01

MVTLFDNQTRISPVPVKSPSPVSEPPSPHNVPPYLTPPPSPSPSVVIPPSPRQSSSSNQSRNVESNPQRSNSNKFKTVAIVAGVAVFAFVAALVIYLFICCCVKKKKNKKHSLDGSSSIVAQSQDGSDPKVIVKLAASDSTKGSLSTKTGISSLVNNSGEPKAIMYLKPRLAIALDVARGIEYLHTLARQTFIHRDLKSSNILLGDDTRAKVSDFGLVKLARMVKSLWQQDLLEHLDTLPLNMQENPLLSRMVLANQIGQEKLMAAIDQTLEVNEETFESISIVAELAGHCTAREANHRPDRDMQSKCCQS*