AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0480021018.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480021018.01.T01 MTR_4g064160 93.383 665 38 4 1 661 1 663 0.0 1210
MsG0480021018.01.T01 MTR_7g062120 47.655 661 316 10 23 659 63 717 0.0 589
MsG0480021018.01.T01 MTR_2g097410 47.414 696 310 16 8 659 35 718 0.0 583
MsG0480021018.01.T01 MTR_4g064150 47.800 659 289 15 25 659 83 710 0.0 560
MsG0480021018.01.T01 MTR_4g064120 47.344 640 272 13 25 659 24 603 0.0 553
MsG0480021018.01.T01 MTR_4g064180 46.562 640 277 12 25 659 24 603 0.0 545
MsG0480021018.01.T01 MTR_2g097390 56.660 473 174 7 190 659 174 618 1.17e-178 523
MsG0480021018.01.T01 MTR_2g097310 55.208 480 181 6 182 659 168 615 3.58e-177 519
MsG0480021018.01.T01 MTR_2g097350 57.269 454 163 7 209 659 192 617 5.45e-175 514
MsG0480021018.01.T01 MTR_2g097467 43.606 649 287 13 28 659 45 631 1.55e-168 498
MsG0480021018.01.T01 MTR_2g097473 44.204 647 286 15 28 659 45 631 1.97e-167 495
MsG0480021018.01.T01 MTR_2g097463 43.444 633 302 14 33 659 50 632 1.44e-166 493
MsG0480021018.01.T01 MTR_4g064200 54.988 431 180 5 239 659 201 627 4.73e-156 465
MsG0480021018.01.T01 MTR_2g097380 51.345 446 158 7 190 633 138 526 2.18e-145 435
MsG0480021018.01.T01 MTR_5g097480 33.140 344 229 1 310 653 173 515 1.47e-60 212
MsG0480021018.01.T01 MTR_2g082090 31.436 369 244 2 302 670 202 561 4.22e-60 212
MsG0480021018.01.T01 MTR_1g029420 34.328 335 220 0 312 646 223 557 5.05e-60 212
MsG0480021018.01.T01 MTR_2g026250 32.558 344 231 1 309 651 223 566 1.15e-58 208
MsG0480021018.01.T01 MTR_3g056110 30.882 408 267 7 249 650 113 511 1.42e-57 204
MsG0480021018.01.T01 MTR_3g089055 32.743 339 228 0 312 650 196 534 2.23e-57 204
MsG0480021018.01.T01 MTR_3g089055 32.743 339 228 0 312 650 201 539 2.60e-57 204
MsG0480021018.01.T01 MTR_4g133660 31.818 352 238 2 309 659 170 520 3.25e-57 203
MsG0480021018.01.T01 MTR_5g094450 32.938 337 220 4 310 641 157 492 3.64e-56 200
MsG0480021018.01.T01 MTR_7g027190 32.468 385 229 6 299 666 286 656 2.22e-55 201
MsG0480021018.01.T01 MTR_8g442410 29.208 404 259 8 277 666 118 508 4.13e-48 177
MsG0480021018.01.T01 MTR_4g104020 29.706 340 217 5 311 637 146 476 4.85e-46 171
MsG0480021018.01.T01 MTR_4g076140 29.765 383 204 6 314 637 48 424 1.63e-44 166
MsG0480021018.01.T01 MTR_3g065980 31.124 347 202 7 309 637 167 494 3.37e-41 158
MsG0480021018.01.T01 MTR_7g074650 31.250 320 206 5 318 637 442 747 5.94e-41 160
MsG0480021018.01.T01 MTR_3g022830 28.418 373 211 5 315 637 26 392 5.61e-39 149
MsG0480021018.01.T01 MTR_4g097080 27.246 345 240 4 312 650 131 470 6.33e-36 142
MsG0480021018.01.T01 MTR_4g102790 26.979 341 232 8 310 642 288 619 1.34e-35 143
MsG0480021018.01.T01 MTR_2g089100 28.412 359 217 8 311 637 49 399 1.73e-34 137
MsG0480021018.01.T01 MTR_2g034250 25.737 373 261 5 309 670 205 572 5.63e-32 131
MsG0480021018.01.T01 MTR_2g034260 26.254 339 235 4 309 637 205 538 6.59e-32 131
MsG0480021018.01.T01 MTR_4g077760 28.612 353 232 7 311 657 190 528 8.69e-32 130
MsG0480021018.01.T01 MTR_4g076020 29.231 325 197 8 318 637 88 384 1.39e-31 128
MsG0480021018.01.T01 MTR_5g009080 33.810 210 132 2 314 522 56 259 1.54e-31 129
MsG0480021018.01.T01 MTR_5g009080 35.185 108 70 0 533 640 329 436 3.19e-15 79.3
MsG0480021018.01.T01 MTR_1g069725 29.129 333 213 10 309 637 104 417 3.43e-31 127
MsG0480021018.01.T01 MTR_7g057230 28.070 342 229 6 315 649 295 626 7.98e-30 125
MsG0480021018.01.T01 MTR_5g015490 27.714 350 235 7 314 650 114 458 3.71e-29 122
MsG0480021018.01.T01 MTR_2g034280 24.865 370 265 4 309 670 198 562 4.77e-28 119
MsG0480021018.01.T01 MTR_1g096030 28.142 366 226 13 314 667 80 420 1.37e-26 114
MsG0480021018.01.T01 MTR_7g109580 27.245 323 217 7 309 624 184 495 2.99e-26 114
MsG0480021018.01.T01 MTR_6g047750 27.536 345 230 8 312 649 293 624 1.44e-23 106
MsG0480021018.01.T01 MTR_3g072710 25.788 349 221 11 323 649 131 463 2.45e-22 101
MsG0480021018.01.T01 MTR_1g086970 25.434 346 226 12 309 634 101 434 8.26e-22 99.8
MsG0480021018.01.T01 MTR_2g099110 26.667 300 206 5 314 608 74 364 1.32e-21 98.6
MsG0480021018.01.T01 MTR_5g015950 25.606 371 224 12 311 633 32 398 1.49e-20 95.5
MsG0480021018.01.T01 MTR_3g053270 25.606 371 224 12 311 633 32 398 1.49e-20 95.5
MsG0480021018.01.T01 MTR_5g058860 26.087 345 225 11 300 623 106 441 2.74e-20 95.1
MsG0480021018.01.T01 MTR_4g095500 24.165 389 241 11 311 651 56 438 7.27e-20 93.6
MsG0480021018.01.T01 MTR_8g093070 25.776 322 198 14 311 614 136 434 1.25e-14 77.4
MsG0480021018.01.T01 MTR_0092s0100 22.835 381 254 10 284 652 349 701 1.96e-14 77.4
MsG0480021018.01.T01 MTR_0092s0100 22.835 381 254 10 284 652 346 698 2.49e-14 77.0
MsG0480021018.01.T01 MTR_8g020840 24.781 343 203 12 234 548 103 418 1.39e-11 67.8
MsG0480021018.01.T01 MTR_4g026485 20.661 363 240 11 284 632 246 574 9.61e-11 65.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480021018.01.T01 AT1G07530 54.671 653 258 10 37 653 86 736 0.0 684
MsG0480021018.01.T01 AT2G29060 49.926 673 271 15 9 653 28 662 0.0 619
MsG0480021018.01.T01 AT2G29060 50.076 657 257 15 9 653 28 625 0.0 612
MsG0480021018.01.T01 AT2G37650 43.598 656 311 12 27 659 59 678 2.53e-172 509
MsG0480021018.01.T01 AT1G07520 46.519 675 296 20 8 659 38 670 2.99e-172 508
MsG0480021018.01.T01 AT1G07520 46.519 675 296 20 8 659 39 671 3.25e-172 508
MsG0480021018.01.T01 AT2G37650 43.598 656 311 12 27 659 71 690 4.37e-172 509
MsG0480021018.01.T01 AT2G29065 45.755 636 271 16 34 659 34 605 8.35e-168 495
MsG0480021018.01.T01 AT1G07520 51.036 531 211 16 150 659 4 506 2.12e-162 478
MsG0480021018.01.T01 AT1G07520 51.036 531 211 16 150 659 4 506 2.12e-162 478
MsG0480021018.01.T01 AT5G59450 45.598 443 235 4 221 659 135 575 3.19e-136 413
MsG0480021018.01.T01 AT3G46600 47.156 422 211 5 238 659 115 524 9.79e-130 394
MsG0480021018.01.T01 AT3G46600 47.156 422 211 4 238 659 147 556 1.01e-129 395
MsG0480021018.01.T01 AT3G46600 51.003 349 170 1 311 659 1 348 2.88e-124 374
MsG0480021018.01.T01 AT1G50600 34.940 332 216 0 310 641 155 486 2.17e-62 217
MsG0480021018.01.T01 AT1G50600 34.940 332 216 0 310 641 230 561 1.45e-61 216
MsG0480021018.01.T01 AT1G50600 34.940 332 216 0 310 641 226 557 1.49e-61 216
MsG0480021018.01.T01 AT1G21450 34.795 342 223 0 312 653 223 564 1.00e-60 214
MsG0480021018.01.T01 AT5G48150 33.819 343 226 1 310 651 118 460 6.35e-60 209
MsG0480021018.01.T01 AT5G48150 33.819 343 226 1 310 651 118 460 6.35e-60 209
MsG0480021018.01.T01 AT5G48150 33.819 343 226 1 310 651 118 460 6.35e-60 209
MsG0480021018.01.T01 AT5G48150 33.819 343 226 1 310 651 118 460 6.35e-60 209
MsG0480021018.01.T01 AT2G04890 33.333 342 221 1 310 651 49 383 1.47e-58 203
MsG0480021018.01.T01 AT4G17230 34.043 329 217 0 309 637 153 481 9.42e-53 190
MsG0480021018.01.T01 AT4G17230 34.043 329 217 0 309 637 153 481 9.42e-53 190
MsG0480021018.01.T01 AT3G03450 32.635 334 208 8 309 637 178 499 7.05e-46 171
MsG0480021018.01.T01 AT5G66770 32.653 343 219 6 318 657 224 557 6.08e-45 169
MsG0480021018.01.T01 AT1G66350 33.233 331 199 9 309 637 150 460 1.59e-43 164
MsG0480021018.01.T01 AT3G54220 31.173 324 204 6 318 637 297 605 1.89e-43 166
MsG0480021018.01.T01 AT5G17490 32.059 340 196 9 309 637 155 470 3.26e-43 164
MsG0480021018.01.T01 AT1G14920 32.317 328 202 7 309 632 167 478 8.19e-43 162
MsG0480021018.01.T01 AT2G01570 30.793 328 207 7 309 632 219 530 6.13e-39 152
MsG0480021018.01.T01 AT3G50650 29.552 335 221 4 332 660 193 518 7.08e-36 142
MsG0480021018.01.T01 AT1G63100 29.830 352 232 8 310 656 273 614 1.53e-35 143
MsG0480021018.01.T01 AT1G63100 29.830 352 232 8 310 656 248 589 1.74e-35 142
MsG0480021018.01.T01 AT4G37650 28.090 356 233 7 313 650 145 495 4.97e-33 134
MsG0480021018.01.T01 AT5G41920 27.697 343 223 7 302 637 31 355 8.86e-32 128
MsG0480021018.01.T01 AT1G50420 30.189 212 139 2 314 522 57 262 4.97e-29 121
MsG0480021018.01.T01 AT1G50420 35.088 114 74 0 533 646 330 443 8.52e-16 81.3
MsG0480021018.01.T01 AT3G49950 27.762 353 234 10 314 651 30 376 1.51e-26 113
MsG0480021018.01.T01 AT5G52510 26.531 343 219 10 330 653 284 612 1.39e-25 112
MsG0480021018.01.T01 AT1G55580 24.810 395 231 10 311 656 41 418 3.83e-25 109
MsG0480021018.01.T01 AT4G08250 24.700 417 282 12 252 649 39 442 2.40e-21 98.2
MsG0480021018.01.T01 AT3G13840 23.446 354 225 13 298 632 133 459 4.73e-11 66.2

Find 162 sgRNAs with CRISPR-Local

Find 186 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGATCACACCTTTGGATTTA+TGG 0.102821 4:+52165417 MsG0480021018.01.T01:CDS
ACTCTCCACATTGTAGATTT+TGG 0.171656 4:+52166666 MsG0480021018.01.T01:CDS
AAACAAAATCAACAGGAAAA+TGG 0.197416 4:-52165774 None:intergenic
TGTAACCGGTGGTGGATTTA+AGG 0.223081 4:+52165852 MsG0480021018.01.T01:CDS
TCTTCTTCTGTAGCATTGTT+TGG 0.273251 4:-52165463 None:intergenic
TTACATTAACCAAATGCTTA+TGG 0.276145 4:+52165531 MsG0480021018.01.T01:CDS
CTTCAAGTCCTCAACTTTGA+TGG 0.287285 4:-52166901 None:intergenic
GAATTCCTTGGTTGTTGATT+TGG 0.294509 4:+52165969 MsG0480021018.01.T01:CDS
AGTAGTATGTATAAAGATAT+TGG 0.295160 4:-52167045 None:intergenic
AATGGAAGGTTCGGAATATA+AGG 0.302414 4:+52167279 MsG0480021018.01.T01:CDS
TTACTAAGCAAGTTTGAATC+AGG 0.311461 4:-52165883 None:intergenic
GTCGGCAGCAGAGTTTCTTT+TGG 0.312934 4:-52166541 None:intergenic
ACAACCAAGGAATTCACTTT+AGG 0.334697 4:-52165961 None:intergenic
GGCAGGCCTGAAGCCAGGTT+GGG 0.342579 4:-52166784 None:intergenic
AAAGAAGAAGCAAATAATTC+TGG 0.356533 4:+52166270 MsG0480021018.01.T01:CDS
TCAATGCTATTGCACAGAAA+TGG 0.371102 4:+52166874 MsG0480021018.01.T01:CDS
GCTCTTGAAGCACGCATGGC+TGG 0.373992 4:+52166486 MsG0480021018.01.T01:CDS
TGATGTTTGAGAAAGAGTTC+TGG 0.377337 4:+52167186 MsG0480021018.01.T01:CDS
AAATGGGTTTGCAATATAGA+AGG 0.381555 4:-52165757 None:intergenic
TCATAGATGGATCACACCTT+TGG 0.385301 4:+52165409 None:intergenic
GATAAGGTGCTGCTTGGAAC+GGG 0.386499 4:+52166198 MsG0480021018.01.T01:CDS
CGGCAGGCCTGAAGCCAGGT+TGG 0.388141 4:-52166785 None:intergenic
AGTAATAGCAGTAGCGATTT+CGG 0.389012 4:+52165829 MsG0480021018.01.T01:CDS
ATGTATGTTTCATGATTCAT+TGG 0.389528 4:+52165576 MsG0480021018.01.T01:CDS
TGTCTTCTTCCATAAGCATT+TGG 0.390726 4:-52165540 None:intergenic
AACAAAATCAACAGGAAAAT+GGG 0.391391 4:-52165773 None:intergenic
TTCCATTTCCTGTATGTCTC+TGG 0.394619 4:-52167263 None:intergenic
TTACTATTAAAACTATCATC+AGG 0.396875 4:-52165667 None:intergenic
GCCGAGAGAGTCCAGGAGAC+AGG 0.397232 4:+52166804 MsG0480021018.01.T01:CDS
CTTCTAAAAGAAGGAACAAA+AGG 0.397285 4:-52166000 None:intergenic
GGCCAGAGACATACAGGAAA+TGG 0.403238 4:+52167261 MsG0480021018.01.T01:CDS
TCGCTAGATTCAAAATTGTA+TGG 0.404227 4:-52166632 None:intergenic
TCTGTAGCATTGTTTGGAGC+TGG 0.404262 4:-52165457 None:intergenic
TTTGGAGCTGGTTGAAGAAA+AGG 0.410352 4:-52165445 None:intergenic
TTGTGGTGAATTCTGTTTGT+CGG 0.410916 4:+52166943 MsG0480021018.01.T01:CDS
GACAGGCTTCAATATACATT+TGG 0.411821 4:-52166578 None:intergenic
GCAGGCCTGAAGCCAGGTTG+GGG 0.414806 4:-52166783 None:intergenic
AAGGGAGGTTCAGGAGGTAG+TGG 0.418003 4:+52166020 MsG0480021018.01.T01:CDS
TTTATACATACTACTGTCAA+TGG 0.418864 4:+52167053 MsG0480021018.01.T01:CDS
CAATGCTATTGCACAGAAAT+GGG 0.422432 4:+52166875 MsG0480021018.01.T01:CDS
CTCTTGAAGCACGCATGGCT+GGG 0.426919 4:+52166487 MsG0480021018.01.T01:CDS
GCAATAGCATTGAACTCAAA+TGG 0.428641 4:-52166864 None:intergenic
GTCTCCTGGACTCTCTCGGC+AGG 0.430954 4:-52166801 None:intergenic
TTGAACCGTGTCGCAAAGAA+TGG 0.433149 4:-52167089 None:intergenic
GTAGTATGTATAAAGATATT+GGG 0.433213 4:-52167044 None:intergenic
AGGAGGAAGCGTAAATTATT+CGG 0.433733 4:-52167429 None:intergenic
TTTCAAGCTACTTCAATGAA+TGG 0.435532 4:+52165796 MsG0480021018.01.T01:CDS
GCATCCGTTACGGCTTTCAA+TGG 0.436217 4:+52166688 MsG0480021018.01.T01:CDS
CCTCCTAAGCTGCTCTTGAC+AGG 0.440626 4:+52166750 MsG0480021018.01.T01:CDS
CTAGGCGAAGCCCTGTCTCC+TGG 0.442369 4:-52166815 None:intergenic
TAATTTCAAAACAGCATCCC+TGG 0.447641 4:-52167006 None:intergenic
TGCAAGCTTCTTGAATGGAC+AGG 0.451062 4:-52166595 None:intergenic
TTGGAGCTGGTTGAAGAAAA+GGG 0.451298 4:-52165444 None:intergenic
AAATCATTCTATGAAGTCAT+TGG 0.453169 4:+52165616 MsG0480021018.01.T01:CDS
CTCTCGGCAGGCCTGAAGCC+AGG 0.453760 4:-52166789 None:intergenic
AAGGCAATATTCTTCTCCAC+TGG 0.454228 4:+52166425 MsG0480021018.01.T01:CDS
GATGTTTGAGAAAGAGTTCT+GGG 0.455142 4:+52167187 MsG0480021018.01.T01:CDS
TGATTTATGCTTGTTGAAGA+TGG 0.455812 4:+52167379 MsG0480021018.01.T01:CDS
TCGAGAGGCCAGAGACATAC+AGG 0.459712 4:+52167255 MsG0480021018.01.T01:CDS
ATCCCTGTCAAGAGCAGCTT+AGG 0.460560 4:-52166753 None:intergenic
ATTCTTTGCGACACGGTTCA+AGG 0.463902 4:+52167091 MsG0480021018.01.T01:CDS
GAAGCACGCATGGCTGGGAC+TGG 0.468425 4:+52166492 MsG0480021018.01.T01:CDS
AGTAGCGATTTCGGTGTAAC+CGG 0.469350 4:+52165838 MsG0480021018.01.T01:CDS
AGAAGAAGAAGATTCACCTT+TGG 0.473696 4:+52165477 MsG0480021018.01.T01:CDS
AGAAAGGAAGAAAAGGCTAA+TGG 0.474775 4:+52166225 MsG0480021018.01.T01:CDS
CATACAGGAAATGGAAGGTT+CGG 0.475232 4:+52167270 MsG0480021018.01.T01:CDS
TGAACCGTGTCGCAAAGAAT+GGG 0.479940 4:-52167088 None:intergenic
ATGAATGCAAGCTTCTTGAA+TGG 0.481139 4:-52166600 None:intergenic
TTCAGGAGGTAGTGGTTGAG+AGG 0.482313 4:+52166028 MsG0480021018.01.T01:CDS
TCAGGGCTTTGTACAGAAGA+AGG 0.485059 4:-52165649 None:intergenic
TGGATTTAAGCAACTCCCCT+TGG 0.498423 4:+52167304 MsG0480021018.01.T01:CDS
GAAAGGAAGAAAAGGCTAAT+GGG 0.502907 4:+52166226 MsG0480021018.01.T01:CDS
GATTTCGGTGTAACCGGTGG+TGG 0.506809 4:+52165844 MsG0480021018.01.T01:CDS
TCTTCCTAAAGTGAATTCCT+TGG 0.507125 4:+52165957 MsG0480021018.01.T01:CDS
TCAGGAGGTAGTGGTTGAGA+GGG 0.507729 4:+52166029 MsG0480021018.01.T01:CDS
CAGGCCTGCCGAGAGAGTCC+AGG 0.510078 4:+52166797 MsG0480021018.01.T01:CDS
GATAAACGATAAATAAGGGC+AGG 0.512065 4:-52166711 None:intergenic
ATGAGTTATTGAGGCAGATA+AGG 0.512815 4:+52166406 MsG0480021018.01.T01:CDS
TATTCTTCTCCACTGGGTGA+TGG 0.514009 4:+52166432 MsG0480021018.01.T01:CDS
TTATACATACTACTGTCAAT+GGG 0.515737 4:+52167054 MsG0480021018.01.T01:CDS
CTGCATGCTGCAAGGATGGA+AGG 0.517952 4:+52167405 MsG0480021018.01.T01:CDS
GCTATCGGAGCTGTTTGATA+AGG 0.519129 4:+52166182 MsG0480021018.01.T01:CDS
GGGGAGGAAGAATCACGAGC+GGG 0.521175 4:+52166089 MsG0480021018.01.T01:CDS
AAGAAACTCTGCTGCCGACA+TGG 0.522015 4:+52166545 MsG0480021018.01.T01:CDS
TGTTGCCTTGTTTCTTACCA+CGG 0.522059 4:-52166305 None:intergenic
AACGTTCACAATACCTTGCT+AGG 0.524003 4:-52166833 None:intergenic
CCGAGAGAGTCCAGGAGACA+GGG 0.524887 4:+52166805 MsG0480021018.01.T01:CDS
CAGGCCTGAAGCCAGGTTGG+GGG 0.525521 4:-52166782 None:intergenic
TGATGATGACAGTGAGCTAT+CGG 0.527539 4:+52166167 MsG0480021018.01.T01:CDS
TGAACCTCCCTTCTAAAAGA+AGG 0.528231 4:-52166009 None:intergenic
ATCGTTTATCAAAACGACCT+GGG 0.530234 4:+52166724 MsG0480021018.01.T01:CDS
GAAGCAAATAATTCTGGTGG+TGG 0.534103 4:+52166276 MsG0480021018.01.T01:CDS
TGATAAGGTGCTGCTTGGAA+CGG 0.538662 4:+52166197 MsG0480021018.01.T01:CDS
GAAACTGCATGCTGCAAGGA+TGG 0.539727 4:+52167401 MsG0480021018.01.T01:CDS
GGGTGATGGATCTCAGAGGC+TGG 0.539936 4:+52166446 MsG0480021018.01.T01:CDS
CTGTTTGATAAGGTGCTGCT+TGG 0.542358 4:+52166192 MsG0480021018.01.T01:CDS
GAGAAATCAATTTCATCCAA+AGG 0.543170 4:-52165493 None:intergenic
GCTTGGAACGGGGTGCAGAA+AGG 0.543390 4:+52166209 MsG0480021018.01.T01:CDS
CCCTGTCTCCTGGACTCTCT+CGG 0.545286 4:-52166805 None:intergenic
TTAATGAGATGTTTATCCAA+GGG 0.545301 4:-52167320 None:intergenic
GTTAATGAGATGTTTATCCA+AGG 0.545722 4:-52167321 None:intergenic
CAGTAGTAGTAATTCTGTTG+AGG 0.547986 4:+52165693 MsG0480021018.01.T01:CDS
CCTGTCAAGAGCAGCTTAGG+AGG 0.549308 4:-52166750 None:intergenic
TACTATTAAAACTATCATCA+GGG 0.551246 4:-52165666 None:intergenic
CAGTTGTGTTGAATAGTCCC+AGG 0.555999 4:+52166988 MsG0480021018.01.T01:CDS
AAGGTTCGGAATATAAGGGC+TGG 0.559644 4:+52167284 MsG0480021018.01.T01:CDS
ACCGGTGGTGGATTTAAGGA+TGG 0.561936 4:+52165856 MsG0480021018.01.T01:CDS
ATGGAAGGTTCGGAATATAA+GGG 0.563303 4:+52167280 MsG0480021018.01.T01:CDS
TTCTAAAAGAAGGAACAAAA+GGG 0.563412 4:-52165999 None:intergenic
ATGAATATTATAGCTTGTGA+AGG 0.563558 4:+52167221 MsG0480021018.01.T01:CDS
GGGGTGCAGAAAGGAAGAAA+AGG 0.571641 4:+52166218 MsG0480021018.01.T01:CDS
TATCGTTTATCAAAACGACC+TGG 0.572065 4:+52166723 MsG0480021018.01.T01:CDS
CTCCTAAGCTGCTCTTGACA+GGG 0.575690 4:+52166751 MsG0480021018.01.T01:CDS
AGGCAACAAGAAGGGTGTTG+TGG 0.575933 4:+52166320 MsG0480021018.01.T01:CDS
GTCTGTGTTGCAATTTGAGA+GGG 0.576245 4:+52165912 MsG0480021018.01.T01:CDS
TGCATGCTGCAAGGATGGAA+GGG 0.578283 4:+52167406 MsG0480021018.01.T01:CDS
AATTTCAAAACAGCATCCCT+GGG 0.578395 4:-52167005 None:intergenic
AATGCTTATGGAAGAAGACA+TGG 0.578952 4:+52165543 MsG0480021018.01.T01:CDS
GAATGCTCTTGAAGCACGCA+TGG 0.581409 4:+52166482 MsG0480021018.01.T01:CDS
TCGTTTATCAAAACGACCTG+GGG 0.584413 4:+52166725 MsG0480021018.01.T01:CDS
ATGCCCCATTCTTTGCGACA+CGG 0.584723 4:+52167084 MsG0480021018.01.T01:CDS
GGGAGGAAGAATCACGAGCG+GGG 0.584989 4:+52166090 MsG0480021018.01.T01:CDS
AGAAGGGTGTTGTGGATCTG+AGG 0.585113 4:+52166328 MsG0480021018.01.T01:CDS
AGACAGGGCTTCGCCTAGCA+AGG 0.589816 4:+52166820 MsG0480021018.01.T01:CDS
TGTTTGAGAAAGAGTTCTGG+GGG 0.594182 4:+52167189 MsG0480021018.01.T01:CDS
ATGGGAAACCATCAAAGTTG+AGG 0.594978 4:+52166893 MsG0480021018.01.T01:CDS
AAGAAACAAGGCAACAAGAA+GGG 0.596770 4:+52166312 MsG0480021018.01.T01:CDS
AGGCAATATTCTTCTCCACT+GGG 0.596774 4:+52166426 MsG0480021018.01.T01:CDS
TTGGTACGCTTTCACCATGT+CGG 0.598816 4:-52166559 None:intergenic
TCCATCCTTAAATCCACCAC+CGG 0.599728 4:-52165857 None:intergenic
CAAATGCTAATGAGTTATTG+AGG 0.600348 4:+52166397 MsG0480021018.01.T01:CDS
CAGGGCTTTGTACAGAAGAA+GGG 0.601972 4:-52165648 None:intergenic
CAGGCCATTGAAAGCCGTAA+CGG 0.602915 4:-52166692 None:intergenic
AGCTTGTGAAGGTTCTCAGA+GGG 0.603648 4:+52167232 MsG0480021018.01.T01:CDS
GCAATTTGAGAGGGGTGTCG+AGG 0.606778 4:+52165921 MsG0480021018.01.T01:CDS
AGGGTTATCCATAAATCCAA+AGG 0.611812 4:-52165425 None:intergenic
TGTGGATCTGAGGACAATGT+TGG 0.619556 4:+52166338 MsG0480021018.01.T01:CDS
GAAGAAGCAAATAATTCTGG+TGG 0.623065 4:+52166273 MsG0480021018.01.T01:CDS
TAATGAGATGTTTATCCAAG+GGG 0.623159 4:-52167319 None:intergenic
GGAAGAAAAGGCTAATGGGT+CGG 0.623814 4:+52166230 MsG0480021018.01.T01:CDS
TAAGAAACAAGGCAACAAGA+AGG 0.624363 4:+52166311 MsG0480021018.01.T01:CDS
GTTAATGTAACGAAGAACAG+TGG 0.624527 4:-52165518 None:intergenic
AGCGATTTCGGTGTAACCGG+TGG 0.625322 4:+52165841 MsG0480021018.01.T01:CDS
AAAAGCCGTGGTAAGAAACA+AGG 0.633423 4:+52166300 MsG0480021018.01.T01:CDS
AATGAATCATGAAACATACA+TGG 0.637630 4:-52165574 None:intergenic
ATGTTTGAGAAAGAGTTCTG+GGG 0.644129 4:+52167188 MsG0480021018.01.T01:CDS
GAACCGTGTCGCAAAGAATG+GGG 0.648096 4:-52167087 None:intergenic
CACTGGGTGATGGATCTCAG+AGG 0.650910 4:+52166442 MsG0480021018.01.T01:CDS
GATGGAAACTGCATGCTGCA+AGG 0.652853 4:+52167397 MsG0480021018.01.T01:CDS
AGTCTGTGTTGCAATTTGAG+AGG 0.657162 4:+52165911 MsG0480021018.01.T01:CDS
CTTTGCGACACGGTTCAAGG+AGG 0.657665 4:+52167094 MsG0480021018.01.T01:CDS
AAGGTTCTCAGAGGGTCGAG+AGG 0.658012 4:+52167240 MsG0480021018.01.T01:CDS
AGTTGTGTTGAATAGTCCCA+GGG 0.661922 4:+52166989 MsG0480021018.01.T01:CDS
AGAGACATACAGGAAATGGA+AGG 0.664271 4:+52167265 MsG0480021018.01.T01:CDS
ATAAGGTGCTGCTTGGAACG+GGG 0.670615 4:+52166199 MsG0480021018.01.T01:CDS
GGATGCCAAAATCTACAATG+TGG 0.681308 4:-52166671 None:intergenic
TCTGTGTTGCAATTTGAGAG+GGG 0.685234 4:+52165913 MsG0480021018.01.T01:CDS
ATGCTTATGGAAGAAGACAT+GGG 0.694678 4:+52165544 MsG0480021018.01.T01:CDS
TAGCTTGTGAAGGTTCTCAG+AGG 0.697926 4:+52167231 MsG0480021018.01.T01:CDS
CGTTTATCAAAACGACCTGG+GGG 0.713845 4:+52166726 MsG0480021018.01.T01:CDS
CTCTGAGATCCATCACCCAG+TGG 0.732644 4:-52166441 None:intergenic
TTGCTCGTGAAGATCAAACG+AGG 0.754863 4:+52167162 MsG0480021018.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTGATAAACGATAAATAA+GGG - Chr4:52166718-52166737 None:intergenic 15.0%
!! AGTAGTATGTATAAAGATAT+TGG - Chr4:52167048-52167067 None:intergenic 20.0%
!! GTAGTATGTATAAAGATATT+GGG - Chr4:52167047-52167066 None:intergenic 20.0%
!! TACTATTAAAACTATCATCA+GGG - Chr4:52165669-52165688 None:intergenic 20.0%
!! TTACTATTAAAACTATCATC+AGG - Chr4:52165670-52165689 None:intergenic 20.0%
!!! ATGCTGTTTTGAAATTAATT+AGG + Chr4:52167012-52167031 MsG0480021018.01.T01:CDS 20.0%
!!! GTTTTGATAAACGATAAATA+AGG - Chr4:52166719-52166738 None:intergenic 20.0%
!!! TGCTGTTTTGAAATTAATTA+GGG + Chr4:52167013-52167032 MsG0480021018.01.T01:CDS 20.0%
! AAACAAAATCAACAGGAAAA+TGG - Chr4:52165777-52165796 None:intergenic 25.0%
! AAAGAAAAATGAACTTCTTG+TGG + Chr4:52166926-52166945 MsG0480021018.01.T01:CDS 25.0%
! AAAGAAGAAGCAAATAATTC+TGG + Chr4:52166270-52166289 MsG0480021018.01.T01:CDS 25.0%
! AAATCATTCTATGAAGTCAT+TGG + Chr4:52165616-52165635 MsG0480021018.01.T01:CDS 25.0%
! AACAAAATCAACAGGAAAAT+GGG - Chr4:52165776-52165795 None:intergenic 25.0%
! AATGAATCATGAAACATACA+TGG - Chr4:52165577-52165596 None:intergenic 25.0%
! ATGTATGTTTCATGATTCAT+TGG + Chr4:52165576-52165595 MsG0480021018.01.T01:CDS 25.0%
! TTAATGAGATGTTTATCCAA+GGG - Chr4:52167323-52167342 None:intergenic 25.0%
! TTACATTAACCAAATGCTTA+TGG + Chr4:52165531-52165550 MsG0480021018.01.T01:CDS 25.0%
! TTATACATACTACTGTCAAT+GGG + Chr4:52167054-52167073 MsG0480021018.01.T01:CDS 25.0%
! TTTATACATACTACTGTCAA+TGG + Chr4:52167053-52167072 MsG0480021018.01.T01:CDS 25.0%
!! ATGAATATTATAGCTTGTGA+AGG + Chr4:52167221-52167240 MsG0480021018.01.T01:CDS 25.0%
!! TTCTAAAAGAAGGAACAAAA+GGG - Chr4:52166002-52166021 None:intergenic 25.0%
!!! TTTTGTTCCTTCTTTTAGAA+GGG + Chr4:52166002-52166021 MsG0480021018.01.T01:CDS 25.0%
CAAATGCTAATGAGTTATTG+AGG + Chr4:52166397-52166416 MsG0480021018.01.T01:CDS 30.0%
GAGAAATCAATTTCATCCAA+AGG - Chr4:52165496-52165515 None:intergenic 30.0%
GCTTGAAAAACAAAATCAAC+AGG - Chr4:52165784-52165803 None:intergenic 30.0%
GTTAATGAGATGTTTATCCA+AGG - Chr4:52167324-52167343 None:intergenic 30.0%
TAATGAGATGTTTATCCAAG+GGG - Chr4:52167322-52167341 None:intergenic 30.0%
TCGCTAGATTCAAAATTGTA+TGG - Chr4:52166635-52166654 None:intergenic 30.0%
TTACTAAGCAAGTTTGAATC+AGG - Chr4:52165886-52165905 None:intergenic 30.0%
TTTCAAGCTACTTCAATGAA+TGG + Chr4:52165796-52165815 MsG0480021018.01.T01:CDS 30.0%
! AAATGGGTTTGCAATATAGA+AGG - Chr4:52165760-52165779 None:intergenic 30.0%
! ATTTTCCAAATCAACAACCA+AGG - Chr4:52165977-52165996 None:intergenic 30.0%
! CTTCTAAAAGAAGGAACAAA+AGG - Chr4:52166003-52166022 None:intergenic 30.0%
! CTTTTGTTCCTTCTTTTAGA+AGG + Chr4:52166001-52166020 MsG0480021018.01.T01:CDS 30.0%
! TACAATTTTGAATCTAGCGA+AGG + Chr4:52166635-52166654 MsG0480021018.01.T01:CDS 30.0%
! TGATTTATGCTTGTTGAAGA+TGG + Chr4:52167379-52167398 MsG0480021018.01.T01:CDS 30.0%
AAGAAACAAGGCAACAAGAA+GGG + Chr4:52166312-52166331 MsG0480021018.01.T01:CDS 35.0%
AATGCTTATGGAAGAAGACA+TGG + Chr4:52165543-52165562 MsG0480021018.01.T01:CDS 35.0%
AATGGAAGGTTCGGAATATA+AGG + Chr4:52167279-52167298 MsG0480021018.01.T01:CDS 35.0%
AATTTCAAAACAGCATCCCT+GGG - Chr4:52167008-52167027 None:intergenic 35.0%
ACAACCAAGGAATTCACTTT+AGG - Chr4:52165964-52165983 None:intergenic 35.0%
AGAAAGGAAGAAAAGGCTAA+TGG + Chr4:52166225-52166244 MsG0480021018.01.T01:CDS 35.0%
AGAAGAAGAAGATTCACCTT+TGG + Chr4:52165477-52165496 MsG0480021018.01.T01:CDS 35.0%
AGGGTTATCCATAAATCCAA+AGG - Chr4:52165428-52165447 None:intergenic 35.0%
AGTAATAGCAGTAGCGATTT+CGG + Chr4:52165829-52165848 MsG0480021018.01.T01:CDS 35.0%
ATCGTTTATCAAAACGACCT+GGG + Chr4:52166724-52166743 MsG0480021018.01.T01:CDS 35.0%
ATGAATGCAAGCTTCTTGAA+TGG - Chr4:52166603-52166622 None:intergenic 35.0%
ATGAGTTATTGAGGCAGATA+AGG + Chr4:52166406-52166425 MsG0480021018.01.T01:CDS 35.0%
ATGCTTATGGAAGAAGACAT+GGG + Chr4:52165544-52165563 MsG0480021018.01.T01:CDS 35.0%
ATGGAAGGTTCGGAATATAA+GGG + Chr4:52167280-52167299 MsG0480021018.01.T01:CDS 35.0%
ATGTTTGAGAAAGAGTTCTG+GGG + Chr4:52167188-52167207 MsG0480021018.01.T01:CDS 35.0%
CAATGCTATTGCACAGAAAT+GGG + Chr4:52166875-52166894 MsG0480021018.01.T01:CDS 35.0%
CAGTAGTAGTAATTCTGTTG+AGG + Chr4:52165693-52165712 MsG0480021018.01.T01:CDS 35.0%
GAAAGGAAGAAAAGGCTAAT+GGG + Chr4:52166226-52166245 MsG0480021018.01.T01:CDS 35.0%
GAAGAAGCAAATAATTCTGG+TGG + Chr4:52166273-52166292 MsG0480021018.01.T01:CDS 35.0%
GACAGGCTTCAATATACATT+TGG - Chr4:52166581-52166600 None:intergenic 35.0%
GATAAACGATAAATAAGGGC+AGG - Chr4:52166714-52166733 None:intergenic 35.0%
GATGTTTGAGAAAGAGTTCT+GGG + Chr4:52167187-52167206 MsG0480021018.01.T01:CDS 35.0%
GTTAATGTAACGAAGAACAG+TGG - Chr4:52165521-52165540 None:intergenic 35.0%
TAAGAAACAAGGCAACAAGA+AGG + Chr4:52166311-52166330 MsG0480021018.01.T01:CDS 35.0%
TAATTTCAAAACAGCATCCC+TGG - Chr4:52167009-52167028 None:intergenic 35.0%
TATCGTTTATCAAAACGACC+TGG + Chr4:52166723-52166742 MsG0480021018.01.T01:CDS 35.0%
TCAATGCTATTGCACAGAAA+TGG + Chr4:52166874-52166893 MsG0480021018.01.T01:CDS 35.0%
TCTTCCTAAAGTGAATTCCT+TGG + Chr4:52165957-52165976 MsG0480021018.01.T01:CDS 35.0%
TCTTCTTCTGTAGCATTGTT+TGG - Chr4:52165466-52165485 None:intergenic 35.0%
TGATGTTTGAGAAAGAGTTC+TGG + Chr4:52167186-52167205 MsG0480021018.01.T01:CDS 35.0%
TGTCTTCTTCCATAAGCATT+TGG - Chr4:52165543-52165562 None:intergenic 35.0%
TTGTGGTGAATTCTGTTTGT+CGG + Chr4:52166943-52166962 MsG0480021018.01.T01:CDS 35.0%
! ACTCTCCACATTGTAGATTT+TGG + Chr4:52166666-52166685 MsG0480021018.01.T01:CDS 35.0%
! GAATTCCTTGGTTGTTGATT+TGG + Chr4:52165969-52165988 MsG0480021018.01.T01:CDS 35.0%
! GCAATAGCATTGAACTCAAA+TGG - Chr4:52166867-52166886 None:intergenic 35.0%
AAAAGCCGTGGTAAGAAACA+AGG + Chr4:52166300-52166319 MsG0480021018.01.T01:CDS 40.0%
AACGTTCACAATACCTTGCT+AGG - Chr4:52166836-52166855 None:intergenic 40.0%
AAGGCAATATTCTTCTCCAC+TGG + Chr4:52166425-52166444 MsG0480021018.01.T01:CDS 40.0%
AGAGACATACAGGAAATGGA+AGG + Chr4:52167265-52167284 MsG0480021018.01.T01:CDS 40.0%
AGGCAATATTCTTCTCCACT+GGG + Chr4:52166426-52166445 MsG0480021018.01.T01:CDS 40.0%
AGTCTGTGTTGCAATTTGAG+AGG + Chr4:52165911-52165930 MsG0480021018.01.T01:CDS 40.0%
AGTTGTGTTGAATAGTCCCA+GGG + Chr4:52166989-52167008 MsG0480021018.01.T01:CDS 40.0%
ATGGGAAACCATCAAAGTTG+AGG + Chr4:52166893-52166912 MsG0480021018.01.T01:CDS 40.0%
CATACAGGAAATGGAAGGTT+CGG + Chr4:52167270-52167289 MsG0480021018.01.T01:CDS 40.0%
CTTCAAGTCCTCAACTTTGA+TGG - Chr4:52166904-52166923 None:intergenic 40.0%
GAAGCAAATAATTCTGGTGG+TGG + Chr4:52166276-52166295 MsG0480021018.01.T01:CDS 40.0%
GGATCACACCTTTGGATTTA+TGG + Chr4:52165417-52165436 MsG0480021018.01.T01:CDS 40.0%
GGATGCCAAAATCTACAATG+TGG - Chr4:52166674-52166693 None:intergenic 40.0%
GTCTGTGTTGCAATTTGAGA+GGG + Chr4:52165912-52165931 MsG0480021018.01.T01:CDS 40.0%
TCGTTTATCAAAACGACCTG+GGG + Chr4:52166725-52166744 MsG0480021018.01.T01:CDS 40.0%
TCTGTGTTGCAATTTGAGAG+GGG + Chr4:52165913-52165932 MsG0480021018.01.T01:CDS 40.0%
TTCCATTTCCTGTATGTCTC+TGG - Chr4:52167266-52167285 None:intergenic 40.0%
TTGGAGCTGGTTGAAGAAAA+GGG - Chr4:52165447-52165466 None:intergenic 40.0%
! TGAACCTCCCTTCTAAAAGA+AGG - Chr4:52166012-52166031 None:intergenic 40.0%
! TGATGATGACAGTGAGCTAT+CGG + Chr4:52166167-52166186 MsG0480021018.01.T01:CDS 40.0%
! TGTTTGAGAAAGAGTTCTGG+GGG + Chr4:52167189-52167208 MsG0480021018.01.T01:CDS 40.0%
! TTTGGAGCTGGTTGAAGAAA+AGG - Chr4:52165448-52165467 None:intergenic 40.0%
!! AACATTTTTCAGCTGAGTCG+AGG + Chr4:52166067-52166086 MsG0480021018.01.T01:CDS 40.0%
!! ACATTTTTCAGCTGAGTCGA+GGG + Chr4:52166068-52166087 MsG0480021018.01.T01:CDS 40.0%
!! GTAGATTTTGGCATCCGTTA+CGG + Chr4:52166678-52166697 MsG0480021018.01.T01:CDS 40.0%
!! TGTTCCTTCTTTTAGAAGGG+AGG + Chr4:52166005-52166024 MsG0480021018.01.T01:CDS 40.0%
!! TGTTGCCTTGTTTCTTACCA+CGG - Chr4:52166308-52166327 None:intergenic 40.0%
!! TTCTTTTAGAAGGGAGGTTC+AGG + Chr4:52166011-52166030 MsG0480021018.01.T01:CDS 40.0%
AAGGTTCGGAATATAAGGGC+TGG + Chr4:52167284-52167303 MsG0480021018.01.T01:CDS 45.0%
AGCTTGTGAAGGTTCTCAGA+GGG + Chr4:52167232-52167251 MsG0480021018.01.T01:CDS 45.0%
ATTCTTTGCGACACGGTTCA+AGG + Chr4:52167091-52167110 MsG0480021018.01.T01:CDS 45.0%
CAGTTGTGTTGAATAGTCCC+AGG + Chr4:52166988-52167007 MsG0480021018.01.T01:CDS 45.0%
CGTTTATCAAAACGACCTGG+GGG + Chr4:52166726-52166745 MsG0480021018.01.T01:CDS 45.0%
GCTATCGGAGCTGTTTGATA+AGG + Chr4:52166182-52166201 MsG0480021018.01.T01:CDS 45.0%
TATTCTTCTCCACTGGGTGA+TGG + Chr4:52166432-52166451 MsG0480021018.01.T01:CDS 45.0%
TCCATCCTTAAATCCACCAC+CGG - Chr4:52165860-52165879 None:intergenic 45.0%
TGAACCGTGTCGCAAAGAAT+GGG - Chr4:52167091-52167110 None:intergenic 45.0%
TGCAAGCTTCTTGAATGGAC+AGG - Chr4:52166598-52166617 None:intergenic 45.0%
TGGATTTAAGCAACTCCCCT+TGG + Chr4:52167304-52167323 MsG0480021018.01.T01:CDS 45.0%
TGTGGATCTGAGGACAATGT+TGG + Chr4:52166338-52166357 MsG0480021018.01.T01:CDS 45.0%
TTGAACCGTGTCGCAAAGAA+TGG - Chr4:52167092-52167111 None:intergenic 45.0%
TTGCTCGTGAAGATCAAACG+AGG + Chr4:52167162-52167181 MsG0480021018.01.T01:CDS 45.0%
TTGGTACGCTTTCACCATGT+CGG - Chr4:52166562-52166581 None:intergenic 45.0%
! AGTAGCGATTTCGGTGTAAC+CGG + Chr4:52165838-52165857 MsG0480021018.01.T01:CDS 45.0%
! CAGGGCTTTGTACAGAAGAA+GGG - Chr4:52165651-52165670 None:intergenic 45.0%
! GGAAGAAAAGGCTAATGGGT+CGG + Chr4:52166230-52166249 MsG0480021018.01.T01:CDS 45.0%
! TAGCTTGTGAAGGTTCTCAG+AGG + Chr4:52167231-52167250 MsG0480021018.01.T01:CDS 45.0%
! TCAGGGCTTTGTACAGAAGA+AGG - Chr4:52165652-52165671 None:intergenic 45.0%
! TCTGTAGCATTGTTTGGAGC+TGG - Chr4:52165460-52165479 None:intergenic 45.0%
!! ATTTTTCAGCTGAGTCGAGG+GGG + Chr4:52166070-52166089 MsG0480021018.01.T01:CDS 45.0%
!! CATTTTTCAGCTGAGTCGAG+GGG + Chr4:52166069-52166088 MsG0480021018.01.T01:CDS 45.0%
!! CTGTTTGATAAGGTGCTGCT+TGG + Chr4:52166192-52166211 MsG0480021018.01.T01:CDS 45.0%
!! TGATAAGGTGCTGCTTGGAA+CGG + Chr4:52166197-52166216 MsG0480021018.01.T01:CDS 45.0%
!! TGTAACCGGTGGTGGATTTA+AGG + Chr4:52165852-52165871 MsG0480021018.01.T01:CDS 45.0%
!! TTTTAGAAGGGAGGTTCAGG+AGG + Chr4:52166014-52166033 MsG0480021018.01.T01:CDS 45.0%
AAGAAACTCTGCTGCCGACA+TGG + Chr4:52166545-52166564 MsG0480021018.01.T01:CDS 50.0%
ATCCCTGTCAAGAGCAGCTT+AGG - Chr4:52166756-52166775 None:intergenic 50.0%
ATGCCCCATTCTTTGCGACA+CGG + Chr4:52167084-52167103 MsG0480021018.01.T01:CDS 50.0%
CAGGCCATTGAAAGCCGTAA+CGG - Chr4:52166695-52166714 None:intergenic 50.0%
CTCCTAAGCTGCTCTTGACA+GGG + Chr4:52166751-52166770 MsG0480021018.01.T01:CDS 50.0%
GAAACTGCATGCTGCAAGGA+TGG + Chr4:52167401-52167420 MsG0480021018.01.T01:CDS 50.0%
GAACCGTGTCGCAAAGAATG+GGG - Chr4:52167090-52167109 None:intergenic 50.0%
GAATGCTCTTGAAGCACGCA+TGG + Chr4:52166482-52166501 MsG0480021018.01.T01:CDS 50.0%
GATGGAAACTGCATGCTGCA+AGG + Chr4:52167397-52167416 MsG0480021018.01.T01:CDS 50.0%
GCATCCGTTACGGCTTTCAA+TGG + Chr4:52166688-52166707 MsG0480021018.01.T01:CDS 50.0%
GGCCAGAGACATACAGGAAA+TGG + Chr4:52167261-52167280 MsG0480021018.01.T01:CDS 50.0%
GGGGTGCAGAAAGGAAGAAA+AGG + Chr4:52166218-52166237 MsG0480021018.01.T01:CDS 50.0%
TGCATGCTGCAAGGATGGAA+GGG + Chr4:52167406-52167425 MsG0480021018.01.T01:CDS 50.0%
! GTCGGCAGCAGAGTTTCTTT+TGG - Chr4:52166544-52166563 None:intergenic 50.0%
! TCAGGAGGTAGTGGTTGAGA+GGG + Chr4:52166029-52166048 MsG0480021018.01.T01:CDS 50.0%
! TTCAGGAGGTAGTGGTTGAG+AGG + Chr4:52166028-52166047 MsG0480021018.01.T01:CDS 50.0%
!! ACCGGTGGTGGATTTAAGGA+TGG + Chr4:52165856-52165875 MsG0480021018.01.T01:CDS 50.0%
!! AGAAGGGTGTTGTGGATCTG+AGG + Chr4:52166328-52166347 MsG0480021018.01.T01:CDS 50.0%
!! AGGCAACAAGAAGGGTGTTG+TGG + Chr4:52166320-52166339 MsG0480021018.01.T01:CDS 50.0%
!! ATAAGGTGCTGCTTGGAACG+GGG + Chr4:52166199-52166218 MsG0480021018.01.T01:CDS 50.0%
!! GATAAGGTGCTGCTTGGAAC+GGG + Chr4:52166198-52166217 MsG0480021018.01.T01:CDS 50.0%
!! TGAGAAAGAGTTCTGGGGGA+GGG + Chr4:52167193-52167212 MsG0480021018.01.T01:CDS 50.0%
!! TTGAGAAAGAGTTCTGGGGG+AGG + Chr4:52167192-52167211 MsG0480021018.01.T01:CDS 50.0%
AAGGGAGGTTCAGGAGGTAG+TGG + Chr4:52166020-52166039 MsG0480021018.01.T01:CDS 55.0%
AAGGTTCTCAGAGGGTCGAG+AGG + Chr4:52167240-52167259 MsG0480021018.01.T01:CDS 55.0%
CCTCCTAAGCTGCTCTTGAC+AGG + Chr4:52166750-52166769 MsG0480021018.01.T01:CDS 55.0%
CCTGTCAAGAGCAGCTTAGG+AGG - Chr4:52166753-52166772 None:intergenic 55.0%
CTCTTGAAGCACGCATGGCT+GGG + Chr4:52166487-52166506 MsG0480021018.01.T01:CDS 55.0%
CTGCATGCTGCAAGGATGGA+AGG + Chr4:52167405-52167424 MsG0480021018.01.T01:CDS 55.0%
CTTTGCGACACGGTTCAAGG+AGG + Chr4:52167094-52167113 MsG0480021018.01.T01:CDS 55.0%
TCGAGAGGCCAGAGACATAC+AGG + Chr4:52167255-52167274 MsG0480021018.01.T01:CDS 55.0%
! AGCGATTTCGGTGTAACCGG+TGG + Chr4:52165841-52165860 MsG0480021018.01.T01:CDS 55.0%
! GATTTCGGTGTAACCGGTGG+TGG + Chr4:52165844-52165863 MsG0480021018.01.T01:CDS 55.0%
!! CACTGGGTGATGGATCTCAG+AGG + Chr4:52166442-52166461 MsG0480021018.01.T01:CDS 55.0%
!! CTCTGAGATCCATCACCCAG+TGG - Chr4:52166444-52166463 None:intergenic 55.0%
!! GCAATTTGAGAGGGGTGTCG+AGG + Chr4:52165921-52165940 MsG0480021018.01.T01:CDS 55.0%
!! TCTGGTGGTGGAAAAAGCCG+TGG + Chr4:52166288-52166307 MsG0480021018.01.T01:CDS 55.0%
AACTCCCCCAACCTGGCTTC+AGG + Chr4:52166778-52166797 MsG0480021018.01.T01:CDS 60.0%
AGACAGGGCTTCGCCTAGCA+AGG + Chr4:52166820-52166839 MsG0480021018.01.T01:CDS 60.0%
CCCTGTCTCCTGGACTCTCT+CGG - Chr4:52166808-52166827 None:intergenic 60.0%
CCGAGAGAGTCCAGGAGACA+GGG + Chr4:52166805-52166824 MsG0480021018.01.T01:CDS 60.0%
GCTCTTGAAGCACGCATGGC+TGG + Chr4:52166486-52166505 MsG0480021018.01.T01:CDS 60.0%
GCTTGGAACGGGGTGCAGAA+AGG + Chr4:52166209-52166228 MsG0480021018.01.T01:CDS 60.0%
GGGAGGAAGAATCACGAGCG+GGG + Chr4:52166090-52166109 MsG0480021018.01.T01:CDS 60.0%
GGGATAGAACTCCCCCAACC+TGG + Chr4:52166771-52166790 MsG0480021018.01.T01:CDS 60.0%
GGGGAGGAAGAATCACGAGC+GGG + Chr4:52166089-52166108 MsG0480021018.01.T01:CDS 60.0%
GGGGGAGGAAGAATCACGAG+CGG + Chr4:52166088-52166107 MsG0480021018.01.T01:CDS 60.0%
TTTCAGCTGAGTCGAGGGGG+AGG + Chr4:52166073-52166092 MsG0480021018.01.T01:CDS 60.0%
!! GGGTGATGGATCTCAGAGGC+TGG + Chr4:52166446-52166465 MsG0480021018.01.T01:CDS 60.0%
AGCAGCTTAGGAGGTCCCCC+AGG - Chr4:52166744-52166763 None:intergenic 65.0%
CTAGGCGAAGCCCTGTCTCC+TGG - Chr4:52166818-52166837 None:intergenic 65.0%
GAAGCACGCATGGCTGGGAC+TGG + Chr4:52166492-52166511 MsG0480021018.01.T01:CDS 65.0%
GCAGGCCTGAAGCCAGGTTG+GGG - Chr4:52166786-52166805 None:intergenic 65.0%
GCCGAGAGAGTCCAGGAGAC+AGG + Chr4:52166804-52166823 MsG0480021018.01.T01:CDS 65.0%
GGCAGGCCTGAAGCCAGGTT+GGG - Chr4:52166787-52166806 None:intergenic 65.0%
GTCTCCTGGACTCTCTCGGC+AGG - Chr4:52166804-52166823 None:intergenic 65.0%
! CAGGCCTGAAGCCAGGTTGG+GGG - Chr4:52166785-52166804 None:intergenic 65.0%
CAGGCCTGCCGAGAGAGTCC+AGG + Chr4:52166797-52166816 MsG0480021018.01.T01:CDS 70.0%
CGGCAGGCCTGAAGCCAGGT+TGG - Chr4:52166788-52166807 None:intergenic 70.0%
CTCTCGGCAGGCCTGAAGCC+AGG - Chr4:52166792-52166811 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
Chr4 gene 52165415 52167436 52165415 ID=MsG0480021018.01;Name=MsG0480021018.01
Chr4 mRNA 52165415 52167436 52165415 ID=MsG0480021018.01.T01;Parent=MsG0480021018.01;Name=MsG0480021018.01.T01;_AED=0.42;_eAED=0.42;_QI=0|-1|0|1|-1|1|1|0|673
Chr4 exon 52165415 52167436 52165415 ID=MsG0480021018.01.T01:exon:28477;Parent=MsG0480021018.01.T01
Chr4 CDS 52165415 52167436 52165415 ID=MsG0480021018.01.T01:cds;Parent=MsG0480021018.01.T01
Gene Sequence

>MsG0480021018.01.T01

ATGGATCACACCTTTGGATTTATGGATAACCCTTTTCTTCAACCAGCTCCAAACAATGCTACAGAAGAAGAAGATTCACCTTTGGATGAAATTGATTTCTCTTCCACTGTTCTTCGTTACATTAACCAAATGCTTATGGAAGAAGACATGGGTATGAAACCATGTATGTTTCATGATTCATTGGCTTTACAAGCTGCTGAAAAATCATTCTATGAAGTCATTGGTGAGACTTACCCTTCTTCTGTACAAAGCCCTGATGATAGTTTTAATAGTAATTTCAGTAGTAGTAATTCTGTTGAGGTTGAATCATATTTGAGTAATTTTGATGTTTCTGAGCATAATCCTTCTATATTGCAAACCCATTTTCCTGTTGATTTTGTTTTTCAAGCTACTTCAATGAATGGTAGTAGTAGTAGTAATAGCAGTAGCGATTTCGGTGTAACCGGTGGTGGATTTAAGGATGGATTTCCTGATTCAAACTTGCTTAGTAAGAATGAGTCTGTGTTGCAATTTGAGAGGGGTGTCGAGGAAGCTAATAAGTTTCTTCCTAAAGTGAATTCCTTGGTTGTTGATTTGGAAAATAACCCTTTTGTTCCTTCTTTTAGAAGGGAGGTTCAGGAGGTAGTGGTTGAGAGGGAGAGCAATGAAAGAGAACATTTTTCAGCTGAGTCGAGGGGGAGGAAGAATCACGAGCGGGGAGATGAATTGAGTTTACAAGATGAGAGAAGTAACAAACAATCAGCTGTTTATACTGATGATGACAGTGAGCTATCGGAGCTGTTTGATAAGGTGCTGCTTGGAACGGGGTGCAGAAAGGAAGAAAAGGCTAATGGGTCGGATACGAGTGTGCAGCAGAAAGAAGAAGCAAATAATTCTGGTGGTGGAAAAAGCCGTGGTAAGAAACAAGGCAACAAGAAGGGTGTTGTGGATCTGAGGACAATGTTGGTTCTATGTGCACAATATGTTTCTTCTGATGATCGTGCAAATGCTAATGAGTTATTGAGGCAGATAAGGCAATATTCTTCTCCACTGGGTGATGGATCTCAGAGGCTGGCACATTGCTTTGCGAATGCTCTTGAAGCACGCATGGCTGGGACTGGAACTCAGATTTATACTGCTTTATACTCCAAAAGAAACTCTGCTGCCGACATGGTGAAAGCGTACCAAATGTATATTGAAGCCTGTCCATTCAAGAAGCTTGCATTCATTTTCGCGAACCATACAATTTTGAATCTAGCGAAGGAAGTAGAAACTCTCCACATTGTAGATTTTGGCATCCGTTACGGCTTTCAATGGCCTGCCCTTATTTATCGTTTATCAAAACGACCTGGGGGACCTCCTAAGCTGCTCTTGACAGGGATAGAACTCCCCCAACCTGGCTTCAGGCCTGCCGAGAGAGTCCAGGAGACAGGGCTTCGCCTAGCAAGGTATTGTGAACGTTTTAATGTTCCATTTGAGTTCAATGCTATTGCACAGAAATGGGAAACCATCAAAGTTGAGGACTTGAAGATAAAGAAAAATGAACTTCTTGTGGTGAATTCTGTTTGTCGGCTTAAAAATTTACTTGACGAGACAGTTGTGTTGAATAGTCCCAGGGATGCTGTTTTGAAATTAATTAGGGACGCAAATCCCAATATCTTTATACATACTACTGTCAATGGGAGCTACAATGCCCCATTCTTTGCGACACGGTTCAAGGAGGCTCTTTTCAATTACTCTACAATGTTTGATGTGCTTGACATCAATGTTGCTCGTGAAGATCAAACGAGGTTGATGTTTGAGAAAGAGTTCTGGGGGAGGGAAGTAATGAATATTATAGCTTGTGAAGGTTCTCAGAGGGTCGAGAGGCCAGAGACATACAGGAAATGGAAGGTTCGGAATATAAGGGCTGGATTTAAGCAACTCCCCTTGGATAAACATCTCATTAACAAGTTAAGATGCAAGTTGAAAGATGTGTATCATAGTGATTTATGCTTGTTGAAGATGGAAACTGCATGCTGCAAGGATGGAAGGGCCGAATAA
Protein sequence

>MsG0480021018.01.T01

MDHTFGFMDNPFLQPAPNNATEEEDSPLDEIDFSSTVLRYINQMLMEEDMGMKPCMFHDSLALQAAEKSFYEVIGETYPSSVQSPDDSFNSNFSSSNSVEVESYLSNFDVSEHNPSILQTHFPVDFVFQATSMNGSSSSNSSSDFGVTGGGFKDGFPDSNLLSKNESVLQFERGVEEANKFLPKVNSLVVDLENNPFVPSFRREVQEVVVERESNEREHFSAESRGRKNHERGDELSLQDERSNKQSAVYTDDDSELSELFDKVLLGTGCRKEEKANGSDTSVQQKEEANNSGGGKSRGKKQGNKKGVVDLRTMLVLCAQYVSSDDRANANELLRQIRQYSSPLGDGSQRLAHCFANALEARMAGTGTQIYTALYSKRNSAADMVKAYQMYIEACPFKKLAFIFANHTILNLAKEVETLHIVDFGIRYGFQWPALIYRLSKRPGGPPKLLLTGIELPQPGFRPAERVQETGLRLARYCERFNVPFEFNAIAQKWETIKVEDLKIKKNELLVVNSVCRLKNLLDETVVLNSPRDAVLKLIRDANPNIFIHTTVNGSYNAPFFATRFKEALFNYSTMFDVLDINVAREDQTRLMFEKEFWGREVMNIIACEGSQRVERPETYRKWKVRNIRAGFKQLPLDKHLINKLRCKLKDVYHSDLCLLKMETACCKDGRAE*