Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480022429.01.T01 | XP_003607180.1 | 98.069 | 259 | 5 | 0 | 1 | 259 | 1 | 259 | 0 | 533 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480022429.01.T01 | Q8GTS2 | 60.92 | 261 | 82 | 6 | 1 | 260 | 1 | 242 | 1.19E-105 | 309 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480022429.01.T01 | B7FIL7 | 98.069 | 259 | 5 | 0 | 1 | 259 | 1 | 259 | 0.0 | 533 |
| Gene ID | Type | Classification |
|---|---|---|
| MsG0480022429.01.T01 | TF | bZIP |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480022429.01.T01 | MTR_4g073100 | 98.069 | 259 | 5 | 0 | 1 | 259 | 1 | 259 | 0.0 | 533 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480022429.01.T01 | AT2G16770 | 60.920 | 261 | 82 | 6 | 1 | 260 | 1 | 242 | 1.22e-106 | 309 |
| MsG0480022429.01.T01 | AT2G16770 | 60.920 | 261 | 82 | 6 | 1 | 260 | 1 | 242 | 1.22e-106 | 309 |
| MsG0480022429.01.T01 | AT4G35040 | 63.636 | 264 | 80 | 8 | 1 | 259 | 1 | 253 | 4.64e-106 | 308 |
| MsG0480022429.01.T01 | AT4G35040 | 63.636 | 264 | 80 | 8 | 1 | 259 | 1 | 253 | 4.64e-106 | 308 |
| MsG0480022429.01.T01 | AT4G35040 | 63.636 | 264 | 80 | 8 | 1 | 259 | 1 | 253 | 4.64e-106 | 308 |
| MsG0480022429.01.T01 | AT4G35040 | 63.636 | 264 | 80 | 8 | 1 | 259 | 1 | 253 | 4.64e-106 | 308 |
| MsG0480022429.01.T01 | AT3G51960 | 54.478 | 134 | 54 | 3 | 39 | 171 | 13 | 140 | 1.76e-45 | 151 |
| MsG0480022429.01.T01 | AT3G51960 | 54.478 | 134 | 54 | 3 | 39 | 171 | 52 | 179 | 4.45e-45 | 151 |
| MsG0480022429.01.T01 | AT3G51960 | 52.239 | 134 | 56 | 2 | 39 | 171 | 52 | 178 | 1.16e-43 | 148 |
Find 78 sgRNAs with CRISPR-Local
Find 89 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGGAGGATTGAAGGGGAAAT+TGG | 0.206995 | 4:+72499535 | MsG0480022429.01.T01:CDS |
| GTGTTTGTTGGTTGATATTA+GGG | 0.255056 | 4:+72499513 | MsG0480022429.01.T01:CDS |
| CCCAACCGGTCGCTTCTTAC+TGG | 0.266035 | 4:-72499338 | None:intergenic |
| GATCCTTGAGCCCCAAATTC+TGG | 0.270466 | 4:-72499759 | None:intergenic |
| AGTGTTTGTTGGTTGATATT+AGG | 0.273430 | 4:+72499512 | MsG0480022429.01.T01:CDS |
| GTGTATGGGAGGCCAGAATT+TGG | 0.299733 | 4:+72499747 | MsG0480022429.01.T01:CDS |
| TGTATGGGAGGCCAGAATTT+GGG | 0.316343 | 4:+72499748 | MsG0480022429.01.T01:CDS |
| GTTGCAAGGGCAGGCTGCTT+TGG | 0.335855 | 4:+72499468 | MsG0480022429.01.T01:CDS |
| GTTTGAAATTCAGCCATGTT+TGG | 0.367715 | 4:-72499121 | None:intergenic |
| CCGAATGAGGATGGATTTGA+TGG | 0.369232 | 4:+72499703 | MsG0480022429.01.T01:CDS |
| CTCAAGGATCTTCGTGGTTG+TGG | 0.376487 | 4:+72499772 | MsG0480022429.01.T01:CDS |
| GGAGGATTGAAGGGGAAATT+GGG | 0.382575 | 4:+72499536 | MsG0480022429.01.T01:CDS |
| ATTTCAAACAAGTGGTTCAA+TGG | 0.405614 | 4:+72499135 | MsG0480022429.01.T01:CDS |
| GTTTGAGAGTCTCCAGTGTA+TGG | 0.417641 | 4:+72499732 | MsG0480022429.01.T01:CDS |
| TGCGAGGTTGAAGTGTTTGT+TGG | 0.420725 | 4:+72499501 | MsG0480022429.01.T01:CDS |
| GCAAGGGCAGGCTGCTTTGG+AGG | 0.426440 | 4:+72499471 | MsG0480022429.01.T01:CDS |
| GGCTGCGTCGTTGGAGGATG+AGG | 0.428168 | 4:+72499405 | MsG0480022429.01.T01:CDS |
| TCATCACACTGCACATTACA+AGG | 0.429810 | 4:-72499628 | None:intergenic |
| GATCTTCGTGGTTGTGGAGG+TGG | 0.440100 | 4:+72499778 | MsG0480022429.01.T01:CDS |
| ACCGCCTCTTTATTCCCAAC+CGG | 0.455765 | 4:-72499352 | None:intergenic |
| TCAGCAGCAATCTTCCCATC+TGG | 0.456534 | 4:-72499670 | None:intergenic |
| ACATTCGCGGGTTTCTGATA+CGG | 0.475335 | 4:-72499565 | None:intergenic |
| GAAAGCTAGGGCTGCGTCGT+TGG | 0.478279 | 4:+72499396 | MsG0480022429.01.T01:CDS |
| TCGTGGTTGTGGAGGTGGAC+CGG | 0.485043 | 4:+72499783 | MsG0480022429.01.T01:CDS |
| CCATCAAATCCATCCTCATT+CGG | 0.488283 | 4:-72499703 | None:intergenic |
| AGCTAGGGCTGCGTCGTTGG+AGG | 0.489293 | 4:+72499399 | MsG0480022429.01.T01:CDS |
| CTGCTGAAGATGATCAGGTT+GGG | 0.489651 | 4:+72499281 | MsG0480022429.01.T01:CDS |
| AGGCCAGAATTTGGGGCTCA+AGG | 0.491612 | 4:+72499756 | MsG0480022429.01.T01:CDS |
| CAAGCTTCCAGTAAAAGAAA+AGG | 0.495698 | 4:+72499826 | MsG0480022429.01.T01:CDS |
| ATCTTCAGCAGGGACAATCT+TGG | 0.499105 | 4:-72499269 | None:intergenic |
| TTGGGGCTCAAGGATCTTCG+TGG | 0.500226 | 4:+72499766 | MsG0480022429.01.T01:CDS |
| GGGTTCATCACATGAGAGCC+AGG | 0.513240 | 4:-72499607 | None:intergenic |
| GCATATTGCCTTCGTCCAGA+TGG | 0.514127 | 4:+72499655 | MsG0480022429.01.T01:CDS |
| TGTCCCTGCTGAAGATGATC+AGG | 0.516014 | 4:+72499276 | MsG0480022429.01.T01:CDS |
| CCAGTAAGAAGCGACCGGTT+GGG | 0.517346 | 4:+72499338 | MsG0480022429.01.T01:CDS |
| ATCGTGAGAAGAAGAAAGCT+AGG | 0.518063 | 4:+72499383 | MsG0480022429.01.T01:CDS |
| TAATGTGCAGTGTGATGATC+GGG | 0.521659 | 4:+72499633 | MsG0480022429.01.T01:CDS |
| CTTTGGAGGCCGAAGTTGCG+AGG | 0.525689 | 4:+72499485 | MsG0480022429.01.T01:CDS |
| CCAACCTGATCATCTTCAGC+AGG | 0.525807 | 4:-72499280 | None:intergenic |
| GATGAGGAAGTTGCAAGGGC+AGG | 0.525833 | 4:+72499459 | MsG0480022429.01.T01:CDS |
| TCCAGTAAGAAGCGACCGGT+TGG | 0.526553 | 4:+72499337 | MsG0480022429.01.T01:CDS |
| AGGATGAGGTCATGAAATTG+AGG | 0.534541 | 4:+72499419 | MsG0480022429.01.T01:CDS |
| ATCGCGGGATTCACATTCGC+GGG | 0.538798 | 4:-72499577 | None:intergenic |
| CATATTGCCTTCGTCCAGAT+GGG | 0.548979 | 4:+72499656 | MsG0480022429.01.T01:CDS |
| AATTCTGGCCTCCCATACAC+TGG | 0.551814 | 4:-72499744 | None:intergenic |
| ATGGCTGAATTTCAAACAAG+TGG | 0.554218 | 4:+72499127 | MsG0480022429.01.T01:CDS |
| GACCAGGTGGGTTACACGTG+TGG | 0.559695 | 4:-72499207 | None:intergenic |
| AATCCCGCGATGAATTTGCC+TGG | 0.562632 | 4:+72499589 | MsG0480022429.01.T01:CDS |
| ACACTTCAACCTCGCAACTT+CGG | 0.570082 | 4:-72499494 | None:intergenic |
| GTTTGTTGGTTGATATTAGG+GGG | 0.578395 | 4:+72499515 | MsG0480022429.01.T01:CDS |
| GGATGAGGTCATGAAATTGA+GGG | 0.578672 | 4:+72499420 | MsG0480022429.01.T01:CDS |
| ACACGTGTGGGTATGAGTAC+AGG | 0.580524 | 4:-72499194 | None:intergenic |
| TGTTTGTTGGTTGATATTAG+GGG | 0.581606 | 4:+72499514 | MsG0480022429.01.T01:CDS |
| GTAATGTGCAGTGTGATGAT+CGG | 0.581966 | 4:+72499632 | MsG0480022429.01.T01:CDS |
| GAAGTCCAGTAAGAAGCGAC+CGG | 0.585566 | 4:+72499333 | MsG0480022429.01.T01:CDS |
| TTTGAGAGTCTCCAGTGTAT+GGG | 0.588557 | 4:+72499733 | MsG0480022429.01.T01:CDS |
| TGAAGTGGCGTTGCCGAATG+AGG | 0.594233 | 4:+72499690 | MsG0480022429.01.T01:CDS |
| GTATGGGAGGCCAGAATTTG+GGG | 0.595109 | 4:+72499749 | MsG0480022429.01.T01:CDS |
| ATTTGATGAGGAAGTTGCAA+GGG | 0.596253 | 4:+72499455 | MsG0480022429.01.T01:CDS |
| GTGGCGTTGCCGAATGAGGA+TGG | 0.599193 | 4:+72499694 | MsG0480022429.01.T01:CDS |
| CATCGCGGGATTCACATTCG+CGG | 0.599241 | 4:-72499578 | None:intergenic |
| AAGGATCTTCGTGGTTGTGG+AGG | 0.602836 | 4:+72499775 | MsG0480022429.01.T01:CDS |
| CATTTGATGAGGAAGTTGCA+AGG | 0.604562 | 4:+72499454 | MsG0480022429.01.T01:CDS |
| ACCCACACGTGTAACCCACC+TGG | 0.607124 | 4:+72499205 | MsG0480022429.01.T01:CDS |
| ACCAGGTGGGTTACACGTGT+GGG | 0.610384 | 4:-72499206 | None:intergenic |
| GAGCCAGGCAAATTCATCGC+GGG | 0.610422 | 4:-72499592 | None:intergenic |
| TCGTGAGAAGAAGAAAGCTA+GGG | 0.612179 | 4:+72499384 | MsG0480022429.01.T01:CDS |
| TGGGAAGATTGCTGCTGAAG+TGG | 0.614233 | 4:+72499675 | MsG0480022429.01.T01:CDS |
| CTTTGAATCAGCATTTGATG+AGG | 0.616238 | 4:+72499443 | MsG0480022429.01.T01:CDS |
| CAATCTTCCCATCTGGACGA+AGG | 0.622375 | 4:-72499663 | None:intergenic |
| CCTGCTGAAGATGATCAGGT+TGG | 0.627520 | 4:+72499280 | MsG0480022429.01.T01:CDS |
| GAGAGTCTCCAGTGTATGGG+AGG | 0.629740 | 4:+72499736 | MsG0480022429.01.T01:CDS |
| GCGACCGGTTGGGAATAAAG+AGG | 0.649541 | 4:+72499348 | MsG0480022429.01.T01:CDS |
| CAACCTGATCATCTTCAGCA+GGG | 0.684116 | 4:-72499279 | None:intergenic |
| ACCGGTTGGGAATAAAGAGG+CGG | 0.690479 | 4:+72499351 | MsG0480022429.01.T01:CDS |
| CATCACACTGCACATTACAA+GGG | 0.696358 | 4:-72499627 | None:intergenic |
| AGAGCCAGGCAAATTCATCG+CGG | 0.740100 | 4:-72499593 | None:intergenic |
| GAATTGACATTAGACAACGC+CGG | 0.756510 | 4:-72499802 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTTTGATGAATTGTTGA+AGG | + | Chr4:72499162-72499181 | MsG0480022429.01.T01:CDS | 20.0% |
| ATTTCAAACAAGTGGTTCAA+TGG | + | Chr4:72499135-72499154 | MsG0480022429.01.T01:CDS | 30.0% | |
| ! | AGTGTTTGTTGGTTGATATT+AGG | + | Chr4:72499512-72499531 | MsG0480022429.01.T01:CDS | 30.0% |
| ! | GTGTTTGTTGGTTGATATTA+GGG | + | Chr4:72499513-72499532 | MsG0480022429.01.T01:CDS | 30.0% |
| ! | TGTTTGTTGGTTGATATTAG+GGG | + | Chr4:72499514-72499533 | MsG0480022429.01.T01:CDS | 30.0% |
| ATGGCTGAATTTCAAACAAG+TGG | + | Chr4:72499127-72499146 | MsG0480022429.01.T01:CDS | 35.0% | |
| ATTTGATGAGGAAGTTGCAA+GGG | + | Chr4:72499455-72499474 | MsG0480022429.01.T01:CDS | 35.0% | |
| CAAGCTTCCAGTAAAAGAAA+AGG | + | Chr4:72499826-72499845 | MsG0480022429.01.T01:CDS | 35.0% | |
| CTTTGAATCAGCATTTGATG+AGG | + | Chr4:72499443-72499462 | MsG0480022429.01.T01:CDS | 35.0% | |
| ! | GTCATCACCTTTTCTTTTAC+TGG | - | Chr4:72499836-72499855 | None:intergenic | 35.0% |
| ! | GTTTGAAATTCAGCCATGTT+TGG | - | Chr4:72499124-72499143 | None:intergenic | 35.0% |
| ! | GTTTGTTGGTTGATATTAGG+GGG | + | Chr4:72499515-72499534 | MsG0480022429.01.T01:CDS | 35.0% |
| AGGATGAGGTCATGAAATTG+AGG | + | Chr4:72499419-72499438 | MsG0480022429.01.T01:CDS | 40.0% | |
| ATATTAGGGGGAGGATTGAA+GGG | + | Chr4:72499527-72499546 | MsG0480022429.01.T01:CDS | 40.0% | |
| ATCGTGAGAAGAAGAAAGCT+AGG | + | Chr4:72499383-72499402 | MsG0480022429.01.T01:CDS | 40.0% | |
| CATCACACTGCACATTACAA+GGG | - | Chr4:72499630-72499649 | None:intergenic | 40.0% | |
| CATTTGATGAGGAAGTTGCA+AGG | + | Chr4:72499454-72499473 | MsG0480022429.01.T01:CDS | 40.0% | |
| CCATCAAATCCATCCTCATT+CGG | - | Chr4:72499706-72499725 | None:intergenic | 40.0% | |
| GAATTGACATTAGACAACGC+CGG | - | Chr4:72499805-72499824 | None:intergenic | 40.0% | |
| GGATGAGGTCATGAAATTGA+GGG | + | Chr4:72499420-72499439 | MsG0480022429.01.T01:CDS | 40.0% | |
| GTAATGTGCAGTGTGATGAT+CGG | + | Chr4:72499632-72499651 | MsG0480022429.01.T01:CDS | 40.0% | |
| GTGTGAGTGTGTGAAAAATC+AGG | - | Chr4:72499232-72499251 | None:intergenic | 40.0% | |
| TAATGTGCAGTGTGATGATC+GGG | + | Chr4:72499633-72499652 | MsG0480022429.01.T01:CDS | 40.0% | |
| TCATCACACTGCACATTACA+AGG | - | Chr4:72499631-72499650 | None:intergenic | 40.0% | |
| TCGTGAGAAGAAGAAAGCTA+GGG | + | Chr4:72499384-72499403 | MsG0480022429.01.T01:CDS | 40.0% | |
| TTTGAGAGTCTCCAGTGTAT+GGG | + | Chr4:72499733-72499752 | MsG0480022429.01.T01:CDS | 40.0% | |
| ACACTTCAACCTCGCAACTT+CGG | - | Chr4:72499497-72499516 | None:intergenic | 45.0% | |
| ACATTCGCGGGTTTCTGATA+CGG | - | Chr4:72499568-72499587 | None:intergenic | 45.0% | |
| ATCTTCAGCAGGGACAATCT+TGG | - | Chr4:72499272-72499291 | None:intergenic | 45.0% | |
| CAACCTGATCATCTTCAGCA+GGG | - | Chr4:72499282-72499301 | None:intergenic | 45.0% | |
| CATATTGCCTTCGTCCAGAT+GGG | + | Chr4:72499656-72499675 | MsG0480022429.01.T01:CDS | 45.0% | |
| CTGCTGAAGATGATCAGGTT+GGG | + | Chr4:72499281-72499300 | MsG0480022429.01.T01:CDS | 45.0% | |
| GATATTAGGGGGAGGATTGA+AGG | + | Chr4:72499526-72499545 | MsG0480022429.01.T01:CDS | 45.0% | |
| GGAGGATTGAAGGGGAAATT+GGG | + | Chr4:72499536-72499555 | MsG0480022429.01.T01:CDS | 45.0% | |
| GTGAAAAATCAGGACCAGGT+GGG | - | Chr4:72499222-72499241 | None:intergenic | 45.0% | |
| GTGTGTGAAAAATCAGGACC+AGG | - | Chr4:72499226-72499245 | None:intergenic | 45.0% | |
| GTTTGAGAGTCTCCAGTGTA+TGG | + | Chr4:72499732-72499751 | MsG0480022429.01.T01:CDS | 45.0% | |
| TATTAGGGGGAGGATTGAAG+GGG | + | Chr4:72499528-72499547 | MsG0480022429.01.T01:CDS | 45.0% | |
| TGTATGGGAGGCCAGAATTT+GGG | + | Chr4:72499748-72499767 | MsG0480022429.01.T01:CDS | 45.0% | |
| TGTGAAAAATCAGGACCAGG+TGG | - | Chr4:72499223-72499242 | None:intergenic | 45.0% | |
| ! | CCGAATGAGGATGGATTTGA+TGG | + | Chr4:72499703-72499722 | MsG0480022429.01.T01:CDS | 45.0% |
| ! | TGCGAGGTTGAAGTGTTTGT+TGG | + | Chr4:72499501-72499520 | MsG0480022429.01.T01:CDS | 45.0% |
| ! | TGTTGGTTGATATTAGGGGG+AGG | + | Chr4:72499518-72499537 | MsG0480022429.01.T01:CDS | 45.0% |
| !!! | CGTGTTTTCGAGTCCAAACA+TGG | + | Chr4:72499108-72499127 | MsG0480022429.01.T01:CDS | 45.0% |
| AAGGATCTTCGTGGTTGTGG+AGG | + | Chr4:72499775-72499794 | MsG0480022429.01.T01:CDS | 50.0% | |
| AATCCCGCGATGAATTTGCC+TGG | + | Chr4:72499589-72499608 | MsG0480022429.01.T01:CDS | 50.0% | |
| AATTCTGGCCTCCCATACAC+TGG | - | Chr4:72499747-72499766 | None:intergenic | 50.0% | |
| ACACGTGTGGGTATGAGTAC+AGG | - | Chr4:72499197-72499216 | None:intergenic | 50.0% | |
| ACCGCCTCTTTATTCCCAAC+CGG | - | Chr4:72499355-72499374 | None:intergenic | 50.0% | |
| ACCGGTTGGGAATAAAGAGG+CGG | + | Chr4:72499351-72499370 | MsG0480022429.01.T01:CDS | 50.0% | |
| AGAGCCAGGCAAATTCATCG+CGG | - | Chr4:72499596-72499615 | None:intergenic | 50.0% | |
| CAATCTTCCCATCTGGACGA+AGG | - | Chr4:72499666-72499685 | None:intergenic | 50.0% | |
| CCAACCTGATCATCTTCAGC+AGG | - | Chr4:72499283-72499302 | None:intergenic | 50.0% | |
| CCTGCTGAAGATGATCAGGT+TGG | + | Chr4:72499280-72499299 | MsG0480022429.01.T01:CDS | 50.0% | |
| CTCAAGGATCTTCGTGGTTG+TGG | + | Chr4:72499772-72499791 | MsG0480022429.01.T01:CDS | 50.0% | |
| GAAGTCCAGTAAGAAGCGAC+CGG | + | Chr4:72499333-72499352 | MsG0480022429.01.T01:CDS | 50.0% | |
| GATCCTTGAGCCCCAAATTC+TGG | - | Chr4:72499762-72499781 | None:intergenic | 50.0% | |
| GCATATTGCCTTCGTCCAGA+TGG | + | Chr4:72499655-72499674 | MsG0480022429.01.T01:CDS | 50.0% | |
| GGGAGGATTGAAGGGGAAAT+TGG | + | Chr4:72499535-72499554 | MsG0480022429.01.T01:CDS | 50.0% | |
| GTATGGGAGGCCAGAATTTG+GGG | + | Chr4:72499749-72499768 | MsG0480022429.01.T01:CDS | 50.0% | |
| GTGTATGGGAGGCCAGAATT+TGG | + | Chr4:72499747-72499766 | MsG0480022429.01.T01:CDS | 50.0% | |
| TCAGCAGCAATCTTCCCATC+TGG | - | Chr4:72499673-72499692 | None:intergenic | 50.0% | |
| TGGGAAGATTGCTGCTGAAG+TGG | + | Chr4:72499675-72499694 | MsG0480022429.01.T01:CDS | 50.0% | |
| TGTCCCTGCTGAAGATGATC+AGG | + | Chr4:72499276-72499295 | MsG0480022429.01.T01:CDS | 50.0% | |
| ATCGCGGGATTCACATTCGC+GGG | - | Chr4:72499580-72499599 | None:intergenic | 55.0% | |
| CATCGCGGGATTCACATTCG+CGG | - | Chr4:72499581-72499600 | None:intergenic | 55.0% | |
| CCAGTAAGAAGCGACCGGTT+GGG | + | Chr4:72499338-72499357 | MsG0480022429.01.T01:CDS | 55.0% | |
| GAGAGTCTCCAGTGTATGGG+AGG | + | Chr4:72499736-72499755 | MsG0480022429.01.T01:CDS | 55.0% | |
| GAGCCAGGCAAATTCATCGC+GGG | - | Chr4:72499595-72499614 | None:intergenic | 55.0% | |
| GATCTTCGTGGTTGTGGAGG+TGG | + | Chr4:72499778-72499797 | MsG0480022429.01.T01:CDS | 55.0% | |
| GATGAGGAAGTTGCAAGGGC+AGG | + | Chr4:72499459-72499478 | MsG0480022429.01.T01:CDS | 55.0% | |
| GCGACCGGTTGGGAATAAAG+AGG | + | Chr4:72499348-72499367 | MsG0480022429.01.T01:CDS | 55.0% | |
| GGGTTCATCACATGAGAGCC+AGG | - | Chr4:72499610-72499629 | None:intergenic | 55.0% | |
| TCCAGTAAGAAGCGACCGGT+TGG | + | Chr4:72499337-72499356 | MsG0480022429.01.T01:CDS | 55.0% | |
| TGAAGTGGCGTTGCCGAATG+AGG | + | Chr4:72499690-72499709 | MsG0480022429.01.T01:CDS | 55.0% | |
| TTGGGGCTCAAGGATCTTCG+TGG | + | Chr4:72499766-72499785 | MsG0480022429.01.T01:CDS | 55.0% | |
| ! | AGGCCAGAATTTGGGGCTCA+AGG | + | Chr4:72499756-72499775 | MsG0480022429.01.T01:CDS | 55.0% |
| !! | ACCAGGTGGGTTACACGTGT+GGG | - | Chr4:72499209-72499228 | None:intergenic | 55.0% |
| ACCCACACGTGTAACCCACC+TGG | + | Chr4:72499205-72499224 | MsG0480022429.01.T01:CDS | 60.0% | |
| CCCAACCGGTCGCTTCTTAC+TGG | - | Chr4:72499341-72499360 | None:intergenic | 60.0% | |
| GAAAGCTAGGGCTGCGTCGT+TGG | + | Chr4:72499396-72499415 | MsG0480022429.01.T01:CDS | 60.0% | |
| GTGGCGTTGCCGAATGAGGA+TGG | + | Chr4:72499694-72499713 | MsG0480022429.01.T01:CDS | 60.0% | |
| GTTGCAAGGGCAGGCTGCTT+TGG | + | Chr4:72499468-72499487 | MsG0480022429.01.T01:CDS | 60.0% | |
| TCGTGGTTGTGGAGGTGGAC+CGG | + | Chr4:72499783-72499802 | MsG0480022429.01.T01:CDS | 60.0% | |
| ! | CTTTGGAGGCCGAAGTTGCG+AGG | + | Chr4:72499485-72499504 | MsG0480022429.01.T01:CDS | 60.0% |
| !! | GACCAGGTGGGTTACACGTG+TGG | - | Chr4:72499210-72499229 | None:intergenic | 60.0% |
| AGCTAGGGCTGCGTCGTTGG+AGG | + | Chr4:72499399-72499418 | MsG0480022429.01.T01:CDS | 65.0% | |
| GGCTGCGTCGTTGGAGGATG+AGG | + | Chr4:72499405-72499424 | MsG0480022429.01.T01:CDS | 65.0% | |
| ! | GCAAGGGCAGGCTGCTTTGG+AGG | + | Chr4:72499471-72499490 | MsG0480022429.01.T01:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr4 | gene | 72499073 | 72499858 | 72499073 | ID=MsG0480022429.01;Name=MsG0480022429.01 |
| Chr4 | mRNA | 72499073 | 72499858 | 72499073 | ID=MsG0480022429.01.T01;Parent=MsG0480022429.01;Name=MsG0480022429.01.T01;_AED=0.50;_eAED=0.50;_QI=0|-1|0|1|-1|1|1|0|261 |
| Chr4 | exon | 72499073 | 72499858 | 72499073 | ID=MsG0480022429.01.T01:exon:10941;Parent=MsG0480022429.01.T01 |
| Chr4 | CDS | 72499073 | 72499858 | 72499073 | ID=MsG0480022429.01.T01:cds;Parent=MsG0480022429.01.T01 |
| Gene Sequence |
| Protein sequence |