AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0480022914.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480022914.01.T01 MTR_8g079502 96.629 178 6 0 1 178 1 178 1.24e-127 356
MsG0480022914.01.T01 MTR_1g047550 86.592 179 24 0 1 179 1 179 7.09e-115 323
MsG0480022914.01.T01 MTR_1g063160 78.212 179 39 0 1 179 1 179 2.54e-100 287
MsG0480022914.01.T01 MTR_4g131030 76.596 188 27 1 1 171 1 188 4.76e-98 282
MsG0480022914.01.T01 MTR_1g054265 77.381 168 38 0 1 168 1 168 5.02e-89 258
MsG0480022914.01.T01 MTR_8g051580 56.571 175 76 0 1 175 1 175 1.97e-68 206
MsG0480022914.01.T01 MTR_8g046350 57.396 169 66 2 1 169 1 163 3.93e-62 189
MsG0480022914.01.T01 MTR_4g094632 40.244 164 86 3 1 164 1 152 1.11e-31 112
MsG0480022914.01.T01 MTR_3g052870 41.727 139 76 3 2 136 9 146 1.11e-27 103
MsG0480022914.01.T01 MTR_3g080940 43.697 119 65 1 1 117 8 126 1.94e-27 102
MsG0480022914.01.T01 MTR_1g106070 44.248 113 61 1 2 112 9 121 3.12e-26 99.0
MsG0480022914.01.T01 MTR_4g094638 50.000 100 47 2 1 97 1 100 9.36e-26 97.8
MsG0480022914.01.T01 MTR_2g105290 41.860 129 64 3 1 129 11 128 2.78e-25 96.3
MsG0480022914.01.T01 MTR_3g052920 60.870 69 27 0 2 70 9 77 5.83e-25 97.1
MsG0480022914.01.T01 MTR_1g105920 62.319 69 26 0 2 70 9 77 8.43e-25 96.7
MsG0480022914.01.T01 MTR_5g045560 33.529 170 93 3 1 154 8 173 1.58e-24 95.9
MsG0480022914.01.T01 MTR_2g030740 60.870 69 27 0 2 70 9 77 1.02e-23 94.0
MsG0480022914.01.T01 MTR_1g105910 60.870 69 27 0 2 70 9 77 1.16e-23 93.6
MsG0480022914.01.T01 MTR_3g030770 57.971 69 29 0 2 70 9 77 2.41e-23 92.8
MsG0480022914.01.T01 MTR_8g043650 59.420 69 28 0 2 70 9 77 2.85e-23 92.8
MsG0480022914.01.T01 MTR_1g108510 57.971 69 29 0 2 70 9 77 2.97e-23 92.4
MsG0480022914.01.T01 MTR_1g012570 42.342 111 61 2 2 110 9 118 3.67e-23 92.4
MsG0480022914.01.T01 MTR_5g053390 56.338 71 31 0 2 72 9 79 5.72e-23 92.0
MsG0480022914.01.T01 MTR_0121s0100 56.522 69 30 0 2 70 9 77 6.89e-23 89.0
MsG0480022914.01.T01 MTR_1g077360 54.930 71 32 0 2 72 9 79 9.60e-23 91.3
MsG0480022914.01.T01 MTR_1g075600 56.338 71 31 0 2 72 9 79 2.72e-22 90.1
MsG0480022914.01.T01 MTR_1g108580 55.072 69 31 0 2 70 9 77 4.26e-22 89.4
MsG0480022914.01.T01 MTR_7g028448 38.931 131 66 3 17 140 27 150 4.92e-22 87.8
MsG0480022914.01.T01 MTR_4g036915 38.931 131 66 3 17 140 27 150 4.92e-22 87.8
MsG0480022914.01.T01 MTR_2g093190 56.522 69 30 0 2 70 9 77 9.59e-22 88.6
MsG0480022914.01.T01 MTR_3g030780 53.623 69 32 0 2 70 9 77 1.03e-21 85.9
MsG0480022914.01.T01 MTR_2g085280 53.623 69 32 0 2 70 9 77 3.43e-21 87.0
MsG0480022914.01.T01 MTR_2g085250 53.623 69 32 0 2 70 9 77 3.58e-21 87.0
MsG0480022914.01.T01 MTR_5g055100 52.113 71 34 0 2 72 9 79 5.06e-21 86.7
MsG0480022914.01.T01 MTR_8g086290 36.429 140 78 3 2 141 12 140 6.74e-21 85.1
MsG0480022914.01.T01 MTR_0121s0080 56.522 69 30 0 2 70 9 77 1.82e-20 85.1
MsG0480022914.01.T01 MTR_0003s0590 47.619 84 40 1 1 84 1 80 5.22e-20 84.3
MsG0480022914.01.T01 MTR_1g105905 65.455 55 19 0 18 72 8 62 1.97e-19 82.0
MsG0480022914.01.T01 MTR_5g021270 51.613 62 30 0 1 62 1 62 2.11e-18 79.7
MsG0480022914.01.T01 MTR_5g021270 51.613 62 30 0 1 62 1 62 2.18e-18 79.7
MsG0480022914.01.T01 MTR_4g127140 51.250 80 39 0 1 80 11 90 2.78e-18 78.6
MsG0480022914.01.T01 MTR_3g452380 53.623 69 32 0 1 69 16 84 3.06e-18 79.3
MsG0480022914.01.T01 MTR_7g062350 57.377 61 26 0 10 70 29 89 3.46e-18 79.3
MsG0480022914.01.T01 MTR_1g053070 50.725 69 34 0 1 69 1 69 3.51e-18 79.3
MsG0480022914.01.T01 MTR_8g087860 40.385 104 59 1 1 104 17 117 8.18e-18 78.6
MsG0480022914.01.T01 MTR_3g005530 50.725 69 34 0 1 69 1 69 8.81e-18 77.8
MsG0480022914.01.T01 MTR_5g066180 48.611 72 37 0 1 72 1 72 8.83e-18 77.8
MsG0480022914.01.T01 MTR_2g017865 52.174 69 33 0 1 69 16 84 1.22e-17 78.2
MsG0480022914.01.T01 MTR_5g066960 53.333 60 28 0 1 60 1 60 2.97e-17 72.4
MsG0480022914.01.T01 MTR_8g033270 49.275 69 35 0 1 69 1 69 3.55e-17 76.6
MsG0480022914.01.T01 MTR_2g009890 47.059 85 44 1 1 85 1 84 3.92e-17 77.0
MsG0480022914.01.T01 MTR_8g033220 49.275 69 35 0 1 69 1 69 1.92e-16 74.3
MsG0480022914.01.T01 MTR_8g033220 49.275 69 35 0 1 69 1 69 2.18e-16 74.3
MsG0480022914.01.T01 MTR_1g101970 46.479 71 38 0 1 71 1 71 3.31e-16 73.2
MsG0480022914.01.T01 MTR_4g093970 49.231 65 33 0 1 65 27 91 4.93e-16 73.6
MsG0480022914.01.T01 MTR_4g102530 46.377 69 37 0 1 69 1 69 6.19e-16 72.8
MsG0480022914.01.T01 MTR_7g075870 46.377 69 37 0 1 69 1 69 6.55e-16 72.8
MsG0480022914.01.T01 MTR_1g108500 56.667 60 24 1 18 75 113 172 7.90e-16 73.9
MsG0480022914.01.T01 MTR_3g067875 60.417 48 19 0 18 65 8 55 8.83e-16 68.6
MsG0480022914.01.T01 MTR_5g031000 47.826 69 36 0 1 69 1 69 1.10e-15 72.4
MsG0480022914.01.T01 MTR_2g461710 50.877 57 28 0 1 57 1 57 1.11e-15 68.2
MsG0480022914.01.T01 MTR_5g031000 47.826 69 36 0 1 69 1 69 1.20e-15 72.4
MsG0480022914.01.T01 MTR_1g038300 46.479 71 36 1 1 69 1 71 1.43e-15 72.0
MsG0480022914.01.T01 MTR_7g075870 53.448 58 27 0 1 58 1 58 1.53e-15 71.6
MsG0480022914.01.T01 MTR_4g109810 33.588 131 72 3 1 116 1 131 1.53e-15 72.4
MsG0480022914.01.T01 MTR_3g067910 52.727 55 26 0 18 72 6 60 2.32e-15 68.9
MsG0480022914.01.T01 MTR_5g046870 52.632 57 27 0 1 57 1 57 3.81e-15 68.2
MsG0480022914.01.T01 MTR_5g046790 48.276 58 30 0 1 58 1 58 4.17e-15 70.5
MsG0480022914.01.T01 MTR_7g016600 52.632 57 27 0 1 57 1 57 6.60e-15 70.5
MsG0480022914.01.T01 MTR_3g113030 48.387 62 32 0 1 62 1 62 6.94e-15 70.1
MsG0480022914.01.T01 MTR_7g016630 34.375 96 62 1 1 95 1 96 1.01e-14 70.1
MsG0480022914.01.T01 MTR_4g109830 41.429 70 40 1 1 69 1 70 1.14e-14 69.7
MsG0480022914.01.T01 MTR_5g032150 50.877 57 28 0 1 57 1 57 1.46e-14 69.3
MsG0480022914.01.T01 MTR_3g084980 54.386 57 26 0 1 57 1 57 1.49e-14 69.7
MsG0480022914.01.T01 MTR_6g464720 33.824 136 86 3 1 134 1 134 1.51e-14 69.7
MsG0480022914.01.T01 MTR_3g102570 45.070 71 38 1 1 70 1 71 1.69e-14 70.1
MsG0480022914.01.T01 MTR_5g032520 50.877 57 28 0 1 57 1 57 1.88e-14 68.9
MsG0480022914.01.T01 MTR_8g097090 52.632 57 27 0 1 57 1 57 2.12e-14 69.3
MsG0480022914.01.T01 MTR_1g029670 38.462 65 40 0 1 65 1 65 2.50e-14 67.8
MsG0480022914.01.T01 MTR_6g015975 52.632 57 27 0 1 57 1 57 2.51e-14 68.9
MsG0480022914.01.T01 MTR_4g084740 47.887 71 36 1 1 70 1 71 2.67e-14 69.7
MsG0480022914.01.T01 MTR_4g036050 44.444 72 39 1 1 71 1 72 2.77e-14 67.8
MsG0480022914.01.T01 MTR_3g088615 40.000 65 39 0 1 65 1 65 3.04e-14 67.8
MsG0480022914.01.T01 MTR_4g036050 44.444 72 39 1 1 71 1 72 3.07e-14 68.2
MsG0480022914.01.T01 MTR_8g066260 48.276 58 30 0 1 58 1 58 3.21e-14 68.6
MsG0480022914.01.T01 MTR_4g036050 47.541 61 32 0 1 61 1 61 3.30e-14 67.8
MsG0480022914.01.T01 MTR_4g093030 53.448 58 27 0 1 58 1 58 3.31e-14 67.0
MsG0480022914.01.T01 MTR_4g036050 47.541 61 32 0 1 61 1 61 3.39e-14 67.4
MsG0480022914.01.T01 MTR_1g041615 68.182 44 14 0 15 58 19 62 3.77e-14 66.2
MsG0480022914.01.T01 MTR_7g075850 50.000 58 29 0 1 58 1 58 2.03e-13 66.6
MsG0480022914.01.T01 MTR_5g041650 48.148 54 28 0 1 54 38 91 9.12e-13 65.9
MsG0480022914.01.T01 MTR_3g109930 42.857 63 36 0 11 73 11 73 1.83e-12 62.8
MsG0480022914.01.T01 MTR_8g022970 40.845 71 42 0 3 73 19 89 4.40e-12 62.0
MsG0480022914.01.T01 MTR_3g067870 50.000 52 26 0 18 69 92 143 4.73e-12 61.2
MsG0480022914.01.T01 MTR_4g108720 46.296 54 29 0 1 54 1 54 2.18e-11 61.6
MsG0480022914.01.T01 MTR_6g018920 34.568 81 41 1 1 81 1 69 2.55e-11 61.2
MsG0480022914.01.T01 MTR_3g437790 44.828 58 31 1 19 75 30 87 7.42e-11 58.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480022914.01.T01 AT2G34440 44.767 172 83 5 1 161 1 171 8.24e-39 130
MsG0480022914.01.T01 AT3G66656 69.565 69 21 0 1 69 1 69 1.10e-30 110
MsG0480022914.01.T01 AT2G24840 44.915 118 63 2 1 117 62 178 5.92e-29 108
MsG0480022914.01.T01 AT5G60440 40.385 156 74 3 2 153 7 147 5.76e-28 106
MsG0480022914.01.T01 AT1G01530 43.165 139 75 2 1 139 6 140 2.82e-25 98.2
MsG0480022914.01.T01 AT1G65360 40.351 114 66 2 1 113 6 118 4.67e-22 89.4
MsG0480022914.01.T01 AT5G13790 40.000 100 60 0 1 100 1 100 1.01e-20 86.7
MsG0480022914.01.T01 AT4G36590 35.220 159 81 4 2 153 7 150 2.73e-20 85.1
MsG0480022914.01.T01 AT3G57230 47.059 85 44 1 1 85 1 84 5.93e-20 81.6
MsG0480022914.01.T01 AT1G47760 54.545 66 29 1 1 65 1 66 1.02e-19 82.0
MsG0480022914.01.T01 AT3G61120 32.620 187 103 6 1 165 1 186 1.55e-19 83.2
MsG0480022914.01.T01 AT5G13790 52.174 69 33 0 1 69 1 69 1.57e-19 83.6
MsG0480022914.01.T01 AT3G57230 47.059 85 44 1 1 85 1 84 2.83e-19 82.4
MsG0480022914.01.T01 AT3G57230 47.059 85 44 1 1 85 1 84 2.83e-19 82.4
MsG0480022914.01.T01 AT3G57390 52.174 69 33 0 1 69 1 69 2.90e-19 82.0
MsG0480022914.01.T01 AT3G57390 52.174 69 33 0 1 69 1 69 5.96e-19 81.6
MsG0480022914.01.T01 AT4G22950 50.725 69 34 0 1 69 1 69 9.17e-19 79.3
MsG0480022914.01.T01 AT3G04100 36.620 142 67 4 2 138 14 137 1.03e-18 80.1
MsG0480022914.01.T01 AT1G72350 56.338 71 29 1 2 72 43 111 1.54e-18 80.1
MsG0480022914.01.T01 AT4G09960 50.725 69 34 0 1 69 1 69 4.33e-18 79.0
MsG0480022914.01.T01 AT4G09960 50.725 69 34 0 1 69 2 70 4.54e-18 79.0
MsG0480022914.01.T01 AT4G09960 44.304 79 44 0 1 79 1 79 4.59e-18 78.6
MsG0480022914.01.T01 AT4G09960 50.725 69 34 0 1 69 11 79 7.11e-18 78.6
MsG0480022914.01.T01 AT5G51860 44.578 83 46 0 1 83 1 83 8.36e-18 77.4
MsG0480022914.01.T01 AT5G51860 44.578 83 46 0 1 83 1 83 8.81e-18 77.8
MsG0480022914.01.T01 AT4G37940 35.897 156 91 5 1 155 1 148 8.84e-18 77.0
MsG0480022914.01.T01 AT4G22950 50.725 69 34 0 1 69 1 69 9.45e-18 77.8
MsG0480022914.01.T01 AT4G22950 50.725 69 34 0 1 69 1 69 9.45e-18 77.8
MsG0480022914.01.T01 AT4G09960 50.725 69 34 0 1 69 27 95 9.73e-18 78.6
MsG0480022914.01.T01 AT4G37940 50.725 69 34 0 1 69 1 69 1.21e-17 77.8
MsG0480022914.01.T01 AT4G09960 50.725 69 34 0 1 69 96 164 1.30e-17 79.0
MsG0480022914.01.T01 AT4G37940 50.725 69 34 0 1 69 1 69 1.54e-17 77.0
MsG0480022914.01.T01 AT2G45650 49.275 69 35 0 1 69 1 69 1.59e-17 77.8
MsG0480022914.01.T01 AT2G22630 45.977 87 42 2 1 85 1 84 1.63e-17 77.4
MsG0480022914.01.T01 AT2G22630 45.977 87 42 2 1 85 1 84 1.63e-17 77.4
MsG0480022914.01.T01 AT3G58780 40.566 106 60 1 1 106 16 118 2.19e-17 77.4
MsG0480022914.01.T01 AT3G58780 40.566 106 60 1 1 106 22 124 2.62e-17 77.4
MsG0480022914.01.T01 AT5G65070 41.667 96 44 2 1 96 1 84 2.89e-17 74.7
MsG0480022914.01.T01 AT1G28460 31.210 157 89 3 2 141 8 162 3.55e-17 75.5
MsG0480022914.01.T01 AT5G51870 49.275 69 35 0 1 69 1 69 3.77e-17 75.9
MsG0480022914.01.T01 AT1G29962 45.205 73 40 0 2 74 8 80 3.81e-17 75.5
MsG0480022914.01.T01 AT5G51870 49.275 69 35 0 1 69 1 69 4.04e-17 75.1
MsG0480022914.01.T01 AT3G58780 40.566 106 60 1 1 106 16 118 4.47e-17 77.0
MsG0480022914.01.T01 AT2G42830 39.623 106 61 1 1 106 16 118 4.52e-17 76.6
MsG0480022914.01.T01 AT2G42830 39.623 106 61 1 1 106 16 118 4.57e-17 76.6
MsG0480022914.01.T01 AT5G51870 49.275 69 35 0 1 69 1 69 6.99e-17 75.5
MsG0480022914.01.T01 AT5G51870 49.275 69 35 0 1 69 24 92 7.51e-17 74.7
MsG0480022914.01.T01 AT5G62165 42.857 84 44 1 1 80 1 84 8.05e-17 73.9
MsG0480022914.01.T01 AT5G62165 42.857 84 44 1 1 80 1 84 8.05e-17 73.9
MsG0480022914.01.T01 AT5G62165 42.857 84 44 1 1 80 1 84 8.05e-17 73.9
MsG0480022914.01.T01 AT5G62165 42.857 84 44 1 1 80 1 84 8.50e-17 72.4
MsG0480022914.01.T01 AT3G58780 44.828 87 35 1 1 74 16 102 8.75e-17 75.5
MsG0480022914.01.T01 AT5G51870 49.275 69 35 0 1 69 11 79 9.82e-17 75.1
MsG0480022914.01.T01 AT5G65070 53.448 58 27 0 1 58 1 58 1.10e-16 74.7
MsG0480022914.01.T01 AT5G62165 36.842 114 61 2 1 103 1 114 1.15e-16 73.6
MsG0480022914.01.T01 AT5G62165 36.842 114 61 2 1 103 1 114 1.15e-16 73.6
MsG0480022914.01.T01 AT5G62165 36.842 114 61 2 1 103 1 114 1.15e-16 73.6
MsG0480022914.01.T01 AT5G62165 36.842 114 61 2 1 103 1 114 1.15e-16 73.6
MsG0480022914.01.T01 AT5G62165 36.842 114 61 2 1 103 1 114 1.15e-16 73.6
MsG0480022914.01.T01 AT2G45660 45.714 70 38 0 1 70 1 70 1.35e-16 73.2
MsG0480022914.01.T01 AT5G10140 54.386 57 26 0 1 57 1 57 1.43e-16 73.6
MsG0480022914.01.T01 AT5G20240 46.970 66 35 0 1 66 1 66 2.40e-16 72.4
MsG0480022914.01.T01 AT5G10140 54.386 57 26 0 1 57 1 57 2.70e-16 73.2
MsG0480022914.01.T01 AT5G10140 53.448 58 27 0 1 58 1 58 2.83e-16 73.2
MsG0480022914.01.T01 AT5G62165 42.857 84 44 1 1 80 1 84 3.04e-16 73.2
MsG0480022914.01.T01 AT5G62165 42.857 84 44 1 1 80 1 84 3.04e-16 73.2
MsG0480022914.01.T01 AT5G10140 54.386 57 26 0 1 57 1 57 3.11e-16 73.2
MsG0480022914.01.T01 AT5G65070 50.769 65 30 1 1 63 1 65 3.11e-16 73.9
MsG0480022914.01.T01 AT5G62165 42.857 84 44 1 1 80 1 84 3.17e-16 73.6
MsG0480022914.01.T01 AT5G62165 42.857 84 44 1 1 80 1 84 3.17e-16 73.6
MsG0480022914.01.T01 AT5G62165 42.857 84 44 1 1 80 1 84 3.17e-16 73.6
MsG0480022914.01.T01 AT5G65070 53.448 58 27 0 1 58 1 58 3.66e-16 73.9
MsG0480022914.01.T01 AT4G18960 51.471 68 33 0 2 69 18 85 3.93e-16 73.9
MsG0480022914.01.T01 AT2G45660 44.444 72 40 0 1 72 1 72 4.01e-16 73.2
MsG0480022914.01.T01 AT4G11880 55.172 58 26 0 1 58 1 58 4.67e-16 72.4
MsG0480022914.01.T01 AT4G11880 55.172 58 26 0 1 58 1 58 4.67e-16 72.4
MsG0480022914.01.T01 AT5G20240 46.970 66 35 0 1 66 1 66 4.99e-16 73.2
MsG0480022914.01.T01 AT2G22540 46.377 69 37 0 1 69 1 69 5.08e-16 73.6
MsG0480022914.01.T01 AT2G22540 46.377 69 37 0 1 69 1 69 5.08e-16 73.6
MsG0480022914.01.T01 AT5G65070 53.448 58 27 0 1 58 1 58 5.44e-16 72.8
MsG0480022914.01.T01 AT4G24540 44.928 69 38 0 1 69 1 69 6.35e-16 72.8
MsG0480022914.01.T01 AT2G03710 39.785 93 50 2 1 91 1 89 6.59e-16 72.4
MsG0480022914.01.T01 AT3G58780 55.932 59 26 0 1 59 16 74 1.03e-15 73.2
MsG0480022914.01.T01 AT2G14210 55.172 58 26 0 1 58 1 58 1.11e-15 72.4
MsG0480022914.01.T01 AT2G14210 55.172 58 26 0 1 58 1 58 1.38e-15 72.4
MsG0480022914.01.T01 AT1G71692 50.000 62 31 0 1 62 1 62 1.48e-15 71.6
MsG0480022914.01.T01 AT4G11880 55.172 58 26 0 1 58 1 58 1.64e-15 72.0
MsG0480022914.01.T01 AT4G11880 55.172 58 26 0 1 58 1 58 1.64e-15 72.0
MsG0480022914.01.T01 AT5G65080 42.308 78 43 1 1 76 8 85 1.82e-15 71.2
MsG0480022914.01.T01 AT1G77980 49.296 71 35 1 1 70 1 71 3.06e-15 72.4
MsG0480022914.01.T01 AT2G22540 52.632 57 27 0 1 57 1 57 5.64e-15 70.5
MsG0480022914.01.T01 AT3G54340 40.476 84 35 1 1 69 1 84 7.59e-15 70.1
MsG0480022914.01.T01 AT1G46408 48.684 76 33 2 1 70 1 76 7.78e-15 70.9
MsG0480022914.01.T01 AT3G30260 52.632 57 27 0 1 57 1 57 8.31e-15 70.5
MsG0480022914.01.T01 AT1G22130 47.887 71 36 1 1 70 1 71 9.52e-15 71.2
MsG0480022914.01.T01 AT2G03710 39.785 93 50 2 1 91 1 89 1.05e-14 70.1
MsG0480022914.01.T01 AT2G03710 39.785 93 50 2 1 91 1 89 1.10e-14 70.1
MsG0480022914.01.T01 AT5G15800 52.632 57 27 0 1 57 1 57 1.28e-14 70.1
MsG0480022914.01.T01 AT3G02310 52.632 57 27 0 1 57 1 57 1.34e-14 68.9
MsG0480022914.01.T01 AT1G17310 58.929 56 21 1 17 72 63 116 1.36e-14 69.3
MsG0480022914.01.T01 AT1G26310 50.000 58 29 0 1 58 1 58 1.50e-14 69.7
MsG0480022914.01.T01 AT1G17310 58.929 56 21 1 17 72 74 127 1.83e-14 69.3
MsG0480022914.01.T01 AT5G15800 52.632 57 27 0 1 57 1 57 1.97e-14 69.7
MsG0480022914.01.T01 AT1G69120 50.000 58 29 0 1 58 1 58 2.00e-14 69.3
MsG0480022914.01.T01 AT5G65060 52.727 55 26 0 1 55 1 55 2.31e-14 68.2
MsG0480022914.01.T01 AT5G65050 50.909 55 27 0 1 55 1 55 2.42e-14 67.8
MsG0480022914.01.T01 AT5G23260 56.140 57 25 0 1 57 17 73 2.54e-14 69.3
MsG0480022914.01.T01 AT5G23260 56.140 57 25 0 1 57 17 73 2.54e-14 69.3
MsG0480022914.01.T01 AT5G23260 56.140 57 25 0 1 57 1 57 2.61e-14 68.9
MsG0480022914.01.T01 AT5G60910 49.123 57 29 0 1 57 1 57 2.62e-14 68.9
MsG0480022914.01.T01 AT5G23260 56.140 57 25 0 1 57 1 57 2.73e-14 68.9
MsG0480022914.01.T01 AT3G02310 52.632 57 27 0 1 57 1 57 2.77e-14 68.9
MsG0480022914.01.T01 AT1G24260 52.632 57 27 0 1 57 1 57 3.04e-14 68.6
MsG0480022914.01.T01 AT1G24260 52.632 57 27 0 1 57 1 57 3.16e-14 68.9
MsG0480022914.01.T01 AT1G24260 52.632 57 27 0 1 57 1 57 3.32e-14 68.9
MsG0480022914.01.T01 AT1G77950 45.070 71 38 1 1 70 1 71 3.73e-14 68.6
MsG0480022914.01.T01 AT1G77950 45.070 71 38 1 1 70 1 71 3.73e-14 68.6
MsG0480022914.01.T01 AT1G77950 45.070 71 38 1 1 70 1 71 3.73e-14 68.6
MsG0480022914.01.T01 AT1G77950 45.070 71 38 1 1 70 1 71 3.73e-14 68.6
MsG0480022914.01.T01 AT5G65060 52.727 55 26 0 1 55 1 55 3.79e-14 67.4
MsG0480022914.01.T01 AT5G65060 52.727 55 26 0 1 55 1 55 4.05e-14 67.8
MsG0480022914.01.T01 AT1G69120 50.000 58 29 0 1 58 1 58 4.10e-14 68.6
MsG0480022914.01.T01 AT5G49490 36.691 139 77 5 3 132 46 182 4.51e-14 68.9
MsG0480022914.01.T01 AT5G65080 50.000 56 28 0 1 56 8 63 6.91e-14 67.0
MsG0480022914.01.T01 AT5G49420 35.461 141 76 4 3 133 8 143 7.06e-14 68.6
MsG0480022914.01.T01 AT5G65050 50.909 55 27 0 1 55 1 55 7.78e-14 67.0
MsG0480022914.01.T01 AT5G65050 50.909 55 27 0 1 55 1 55 7.93e-14 66.6
MsG0480022914.01.T01 AT5G65050 50.909 55 27 0 1 55 1 55 8.09e-14 66.6
MsG0480022914.01.T01 AT4G37435 28.492 179 103 4 1 156 1 177 8.68e-14 66.6
MsG0480022914.01.T01 AT1G28450 39.726 73 44 0 2 74 8 80 2.84e-13 65.1
MsG0480022914.01.T01 AT1G18750 41.096 73 41 1 1 71 1 73 6.29e-13 66.2
MsG0480022914.01.T01 AT1G18750 41.096 73 41 1 1 71 1 73 6.74e-13 66.2
MsG0480022914.01.T01 AT1G18750 41.096 73 41 1 1 71 1 73 7.34e-13 65.9
MsG0480022914.01.T01 AT1G60920 38.202 89 50 2 3 86 5 93 7.55e-13 64.3
MsG0480022914.01.T01 AT5G38620 33.566 143 78 4 3 133 6 143 7.93e-13 65.9
MsG0480022914.01.T01 AT1G69540 44.444 72 39 1 1 71 1 72 9.56e-13 65.5
MsG0480022914.01.T01 AT1G69540 44.444 72 39 1 1 71 1 72 1.25e-12 65.5
MsG0480022914.01.T01 AT5G04640 40.000 75 41 1 3 73 5 79 1.69e-12 64.7
MsG0480022914.01.T01 AT2G03060 49.057 53 27 0 1 53 1 53 9.08e-12 62.8
MsG0480022914.01.T01 AT2G03060 49.057 53 27 0 1 53 1 53 9.08e-12 62.8
MsG0480022914.01.T01 AT2G03060 49.057 53 27 0 1 53 1 53 9.08e-12 62.8
MsG0480022914.01.T01 AT2G03060 52.000 50 24 0 1 50 1 50 9.34e-12 62.8
MsG0480022914.01.T01 AT2G26320 33.333 84 50 1 1 78 17 100 1.86e-11 58.5
MsG0480022914.01.T01 AT1G77080 66.667 39 13 0 1 39 1 39 3.73e-11 59.3
MsG0480022914.01.T01 AT1G77080 66.667 39 13 0 1 39 1 39 3.76e-11 59.3
MsG0480022914.01.T01 AT1G77080 66.667 39 13 0 1 39 1 39 7.39e-11 57.8
MsG0480022914.01.T01 AT1G77080 66.667 39 13 0 1 39 1 39 9.61e-11 58.5

Find 26 sgRNAs with CRISPR-Local

Find 36 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGGAGCAGGCCTTACTCTTT+TGG 0.245085 4:+78516276 MsG0480022914.01.T01:CDS
AACTTCCGCTCCACACAAAA+TGG 0.333660 4:-78516232 None:intergenic
CATACAAAGAGTTGCAAGAT+TGG 0.368139 4:+78516529 MsG0480022914.01.T01:CDS
GCTATTGTTGTGTTCTCTCC+AGG 0.378858 4:+78516255 MsG0480022914.01.T01:CDS
CTTAATGATATCGAGATATC+AGG 0.380548 4:+78516564 MsG0480022914.01.T01:CDS
TCCCAAGAAAACCCCTCTTC+TGG 0.386252 4:+78516360 MsG0480022914.01.T01:CDS
CACTCGGTTCAGTCTCTTGT+TGG 0.390051 4:-78516335 None:intergenic
TTGTGTTCTCTCCAGGGAGC+AGG 0.414313 4:+78516262 MsG0480022914.01.T01:CDS
ATTTGCTTTCTTGAATAAAC+CGG 0.439912 4:-78516202 None:intergenic
ATATATGATGCTTCTTGCTC+AGG 0.443837 4:+78516587 MsG0480022914.01.T01:CDS
AATGTGACTTGCCTTGTGTT+GGG 0.459141 4:-78516165 None:intergenic
CTATTGTTGTGTTCTCTCCA+GGG 0.468254 4:+78516256 MsG0480022914.01.T01:CDS
GAATGTGACTTGCCTTGTGT+TGG 0.494208 4:-78516166 None:intergenic
ACATTCTCAAAGCGTCGTAC+CGG 0.495108 4:+78516183 MsG0480022914.01.T01:CDS
CCTGGATGTCCAAAAGAGTA+AGG 0.496588 4:-78516285 None:intergenic
AAAGAGTAAGGCCTGCTCCC+TGG 0.497677 4:-78516273 None:intergenic
TCGCAAGATTGAGATTGAAA+TGG 0.516942 4:+78516134 MsG0480022914.01.T01:CDS
GCAGCAACAACATCAACTCC+TGG 0.529628 4:-78516303 None:intergenic
ATATCTGGAGCACCAGAAGA+GGG 0.574335 4:-78516372 None:intergenic
TCTAGAACTTGGTGAGGTGT+TGG 0.599733 4:+78516407 MsG0480022914.01.T01:CDS
TATATCTGGAGCACCAGAAG+AGG 0.607885 4:-78516373 None:intergenic
CTTGCTCAGGATCCAGTCGT+AGG 0.638493 4:+78516600 MsG0480022914.01.T01:CDS
ATTGAATCTAGAACTTGGTG+AGG 0.645281 4:+78516401 MsG0480022914.01.T01:CDS
TGGTGAAAGATCCCAACACA+AGG 0.650315 4:+78516154 MsG0480022914.01.T01:CDS
GTGTTGGCACAAATTCGAGA+AGG 0.667053 4:+78516423 MsG0480022914.01.T01:CDS
TATCTGGAGCACCAGAAGAG+GGG 0.681739 4:-78516371 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AGATTCAATTTTTCTATATC+TGG - Chr4:78516390-78516409 None:intergenic 20.0%
! ATTTGCTTTCTTGAATAAAC+CGG - Chr4:78516205-78516224 None:intergenic 25.0%
!! AATGAATTATCCATTTTGTG+TGG + Chr4:78516222-78516241 MsG0480022914.01.T01:CDS 25.0%
!! GAAAAATTGAATCTAGAACT+TGG + Chr4:78516396-78516415 MsG0480022914.01.T01:CDS 25.0%
CTTAATGATATCGAGATATC+AGG + Chr4:78516564-78516583 MsG0480022914.01.T01:CDS 30.0%
ATATATGATGCTTCTTGCTC+AGG + Chr4:78516587-78516606 MsG0480022914.01.T01:CDS 35.0%
CATACAAAGAGTTGCAAGAT+TGG + Chr4:78516529-78516548 MsG0480022914.01.T01:CDS 35.0%
TCGCAAGATTGAGATTGAAA+TGG + Chr4:78516134-78516153 MsG0480022914.01.T01:CDS 35.0%
! ATTATCCATTTTGTGTGGAG+CGG + Chr4:78516227-78516246 MsG0480022914.01.T01:CDS 35.0%
! ATTGAATCTAGAACTTGGTG+AGG + Chr4:78516401-78516420 MsG0480022914.01.T01:CDS 35.0%
!! AGAGTTTTGTCACATCGTTT+TGG - Chr4:78516485-78516504 None:intergenic 35.0%
!! TTCGTTTTTATTCCTACGAC+TGG - Chr4:78516615-78516634 None:intergenic 35.0%
CTATTGTTGTGTTCTCTCCA+GGG + Chr4:78516256-78516275 MsG0480022914.01.T01:CDS 40.0%
! AATGTGACTTGCCTTGTGTT+GGG - Chr4:78516168-78516187 None:intergenic 40.0%
AACTTCCGCTCCACACAAAA+TGG - Chr4:78516235-78516254 None:intergenic 45.0%
CCTGGATGTCCAAAAGAGTA+AGG - Chr4:78516288-78516307 None:intergenic 45.0%
GCTATTGTTGTGTTCTCTCC+AGG + Chr4:78516255-78516274 MsG0480022914.01.T01:CDS 45.0%
TGGTGAAAGATCCCAACACA+AGG + Chr4:78516154-78516173 MsG0480022914.01.T01:CDS 45.0%
! ACCAGAAGAGGGGTTTTCTT+GGG - Chr4:78516364-78516383 None:intergenic 45.0%
! ATATCTGGAGCACCAGAAGA+GGG - Chr4:78516375-78516394 None:intergenic 45.0%
! CCTTACTCTTTTGGACATCC+AGG + Chr4:78516285-78516304 MsG0480022914.01.T01:CDS 45.0%
! GAATGTGACTTGCCTTGTGT+TGG - Chr4:78516169-78516188 None:intergenic 45.0%
! GGGTTTTCTTGGGAATCACT+CGG - Chr4:78516354-78516373 None:intergenic 45.0%
! GTGTTGGCACAAATTCGAGA+AGG + Chr4:78516423-78516442 MsG0480022914.01.T01:CDS 45.0%
! TATATCTGGAGCACCAGAAG+AGG - Chr4:78516376-78516395 None:intergenic 45.0%
! TCTAGAACTTGGTGAGGTGT+TGG + Chr4:78516407-78516426 MsG0480022914.01.T01:CDS 45.0%
!! ACATTCTCAAAGCGTCGTAC+CGG + Chr4:78516183-78516202 MsG0480022914.01.T01:CDS 45.0%
CACTCGGTTCAGTCTCTTGT+TGG - Chr4:78516338-78516357 None:intergenic 50.0%
GCAGCAACAACATCAACTCC+TGG - Chr4:78516306-78516325 None:intergenic 50.0%
TCCCAAGAAAACCCCTCTTC+TGG + Chr4:78516360-78516379 MsG0480022914.01.T01:CDS 50.0%
! CACCAGAAGAGGGGTTTTCT+TGG - Chr4:78516365-78516384 None:intergenic 50.0%
! TATCTGGAGCACCAGAAGAG+GGG - Chr4:78516374-78516393 None:intergenic 50.0%
AAAGAGTAAGGCCTGCTCCC+TGG - Chr4:78516276-78516295 None:intergenic 55.0%
CTTGCTCAGGATCCAGTCGT+AGG + Chr4:78516600-78516619 MsG0480022914.01.T01:CDS 55.0%
TTGTGTTCTCTCCAGGGAGC+AGG + Chr4:78516262-78516281 MsG0480022914.01.T01:CDS 55.0%
! GGGAGCAGGCCTTACTCTTT+TGG + Chr4:78516276-78516295 MsG0480022914.01.T01:CDS 55.0%
Chromosome Type Strat End Strand Name
Chr4 gene 78516126 78516665 78516126 ID=MsG0480022914.01;Name=MsG0480022914.01
Chr4 mRNA 78516126 78516665 78516126 ID=MsG0480022914.01.T01;Parent=MsG0480022914.01;Name=MsG0480022914.01.T01;_AED=0.25;_eAED=0.25;_QI=0|-1|0|1|-1|1|1|0|179
Chr4 exon 78516126 78516665 78516126 ID=MsG0480022914.01.T01:exon:32249;Parent=MsG0480022914.01.T01
Chr4 CDS 78516126 78516665 78516126 ID=MsG0480022914.01.T01:cds;Parent=MsG0480022914.01.T01
Gene Sequence

>MsG0480022914.01.T01

ATGGGTCGTCGCAAGATTGAGATTGAAATGGTGAAAGATCCCAACACAAGGCAAGTCACATTCTCAAAGCGTCGTACCGGTTTATTCAAGAAAGCAAATGAATTATCCATTTTGTGTGGAGCGGAAGTTGCTATTGTTGTGTTCTCTCCAGGGAGCAGGCCTTACTCTTTTGGACATCCAGGAGTTGATGTTGTTGCTGCAAAGTATCTCCAACAAGAGACTGAACCGAGTGATTCCCAAGAAAACCCCTCTTCTGGTGCTCCAGATATAGAAAAATTGAATCTAGAACTTGGTGAGGTGTTGGCACAAATTCGAGAAGGTGAAAAGCAAGCTGAGACTCATGATGAAATTCTGAACCAAAACGATGTGACAAAACTCTCTAAGCTTAAAGAATTGAGAGATTCATACAAAGAGTTGCAAGATTGGATAAAATTGCGTCTTAATGATATCGAGATATCAGGATATATGATGCTTCTTGCTCAGGATCCAGTCGTAGGAATAAAAACGAAATCTGCAAAGAGAAGAAGAAGAAGAAATTGA
Protein sequence

>MsG0480022914.01.T01

MGRRKIEIEMVKDPNTRQVTFSKRRTGLFKKANELSILCGAEVAIVVFSPGSRPYSFGHPGVDVVAAKYLQQETEPSDSQENPSSGAPDIEKLNLELGEVLAQIREGEKQAETHDEILNQNDVTKLSKLKELRDSYKELQDWIKLRLNDIEISGYMMLLAQDPVVGIKTKSAKRRRRRN*