AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0480023555.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480023555.01.T01 MTR_4g107230 91.860 86 7 0 181 266 82 167 2.32e-39 139
MsG0480023555.01.T01 MTR_0036s0260 83.824 68 11 0 183 250 28 95 1.41e-34 124
MsG0480023555.01.T01 MTR_4g100630 75.714 70 17 0 181 250 93 162 1.93e-33 124
MsG0480023555.01.T01 MTR_6g092540 76.119 67 16 0 181 247 95 161 6.19e-33 122
MsG0480023555.01.T01 MTR_2g100930 70.833 72 21 0 181 252 107 178 1.17e-32 122
MsG0480023555.01.T01 MTR_2g090305 80.882 68 13 0 183 250 28 95 2.79e-32 117
MsG0480023555.01.T01 MTR_5g037080 84.722 72 11 0 181 252 100 171 2.05e-31 118
MsG0480023555.01.T01 MTR_8g101650 74.627 67 16 1 181 247 103 168 1.17e-30 115
MsG0480023555.01.T01 MTR_4g111975 72.059 68 19 0 181 248 136 203 1.57e-29 113
MsG0480023555.01.T01 MTR_1g111830 60.714 84 31 2 181 262 122 205 6.43e-29 110
MsG0480023555.01.T01 MTR_7g067080 53.409 88 41 0 181 268 138 225 5.81e-27 106
MsG0480023555.01.T01 MTR_3g462790 54.945 91 38 1 181 268 145 235 6.98e-27 106
MsG0480023555.01.T01 MTR_5g069710 63.014 73 27 0 181 253 130 202 1.15e-26 105
MsG0480023555.01.T01 MTR_3g104370 61.429 70 24 1 181 247 89 158 6.73e-24 96.7
MsG0480023555.01.T01 MTR_5g081860 58.667 75 29 1 181 253 123 197 9.27e-24 97.4
MsG0480023555.01.T01 MTR_8g063600 57.746 71 28 1 181 249 104 174 3.76e-21 90.5
MsG0480023555.01.T01 MTR_1g048660 50.746 67 33 0 184 250 13 79 1.27e-18 79.0
MsG0480023555.01.T01 MTR_5g027570 42.353 85 44 2 183 262 92 176 2.38e-18 82.0
MsG0480023555.01.T01 MTR_5g088010 44.048 84 41 2 181 258 58 141 4.97e-18 81.3
MsG0480023555.01.T01 MTR_4g015130 59.649 57 23 0 193 249 3 59 6.29e-18 76.6
MsG0480023555.01.T01 MTR_5g027550 44.186 86 42 2 183 262 77 162 1.30e-17 79.7
MsG0480023555.01.T01 MTR_1g033620 68.627 51 16 0 198 248 20 70 1.34e-17 80.1
MsG0480023555.01.T01 MTR_8g063870 56.061 66 27 1 185 248 94 159 1.74e-17 80.5
MsG0480023555.01.T01 MTR_5g088060 46.250 80 37 2 185 258 274 353 6.18e-17 80.5
MsG0480023555.01.T01 MTR_5g488160 46.250 80 37 2 185 258 274 353 6.18e-17 80.5
MsG0480023555.01.T01 MTR_1g083180 47.143 70 33 2 185 251 63 131 2.40e-12 64.3
MsG0480023555.01.T01 MTR_5g075760 48.485 66 31 2 185 248 107 171 6.07e-11 61.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480023555.01.T01 AT5G47390 64.773 88 31 0 181 268 94 181 2.27e-36 133
MsG0480023555.01.T01 AT1G70000 73.494 83 22 0 181 263 96 178 9.35e-30 113
MsG0480023555.01.T01 AT1G70000 73.494 83 22 0 181 263 96 178 9.35e-30 113
MsG0480023555.01.T01 AT1G49010 72.059 68 19 0 181 248 132 199 1.71e-29 113
MsG0480023555.01.T01 AT5G04760 63.636 77 27 1 181 256 97 173 4.20e-29 110
MsG0480023555.01.T01 AT5G56840 64.557 79 23 2 181 258 89 163 2.73e-28 108
MsG0480023555.01.T01 AT5G08520 67.647 68 22 0 181 248 116 183 6.17e-28 109
MsG0480023555.01.T01 AT3G16350 63.333 90 31 1 181 268 135 224 6.86e-28 110
MsG0480023555.01.T01 AT1G19000 73.494 83 22 0 181 263 100 182 1.14e-27 108
MsG0480023555.01.T01 AT1G19000 73.494 83 22 0 181 263 100 182 1.14e-27 108
MsG0480023555.01.T01 AT2G38090 60.526 76 30 0 181 256 139 214 1.26e-27 108
MsG0480023555.01.T01 AT1G74840 80.769 78 13 1 181 258 94 169 2.40e-27 106
MsG0480023555.01.T01 AT1G74840 80.769 78 13 1 181 258 94 169 3.26e-27 106
MsG0480023555.01.T01 AT5G61620 62.857 70 26 0 181 250 106 175 5.30e-27 107
MsG0480023555.01.T01 AT5G58900 66.176 68 23 0 181 248 139 206 5.63e-27 106
MsG0480023555.01.T01 AT5G01200 61.765 68 26 0 181 248 144 211 3.08e-24 98.6
MsG0480023555.01.T01 AT3G11280 61.765 68 26 0 181 248 125 192 3.20e-23 95.9
MsG0480023555.01.T01 AT3G11280 61.765 68 26 0 181 248 125 192 3.20e-23 95.9
MsG0480023555.01.T01 AT5G05790 61.765 68 26 0 181 248 129 196 3.91e-23 95.9
MsG0480023555.01.T01 AT5G05790 61.765 68 26 0 181 248 129 196 3.91e-23 95.9
MsG0480023555.01.T01 AT4G09450 53.333 75 35 0 182 256 90 164 5.15e-21 88.6
MsG0480023555.01.T01 AT3G10580 56.522 69 28 1 181 249 93 159 1.62e-20 88.2
MsG0480023555.01.T01 AT3G10580 56.522 69 28 1 181 249 93 159 2.48e-20 88.6
MsG0480023555.01.T01 AT5G23650 48.315 89 41 1 181 264 118 206 3.32e-20 89.0
MsG0480023555.01.T01 AT3G10590 46.154 78 41 1 184 261 112 188 3.13e-17 78.2

Find 62 sgRNAs with CRISPR-Local

Find 303 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAATTGGAATTCGGCGAAAT+TGG 0.267088 4:+86825605 MsG0480023555.01.T01:CDS
AAAGCTTGATGCTTTGGTTA+TGG 0.292217 4:+86826357 MsG0480023555.01.T01:CDS
AAGCTTGATGCTTTGGTTAT+GGG 0.314281 4:+86826358 MsG0480023555.01.T01:CDS
ATTGGATTCGTATTCATATT+CGG 0.335919 4:-86823930 None:intergenic
GGATTTAAAGCTTGATGCTT+TGG 0.359663 4:+86826351 MsG0480023555.01.T01:CDS
AGAAGATTGTTGATTCTGTT+GGG 0.368197 4:+86826329 MsG0480023555.01.T01:CDS
GAGAAGATTGTTGATTCTGT+TGG 0.375475 4:+86826328 MsG0480023555.01.T01:CDS
ATCCAATCCTCGACTCAATT+CGG 0.383316 4:+86823946 MsG0480023555.01.T01:CDS
ATGATACGTTCGGCTTGATT+CGG 0.399842 4:-86825331 None:intergenic
TTGACCTGTTCTGCCTCCAC+TGG 0.404876 4:-86829833 None:intergenic
AATTCCAGTGGAGGCAGAAC+AGG 0.422715 4:+86829829 MsG0480023555.01.T01:CDS
AAAACTTGAAGAGGCTGATT+CGG 0.426075 4:-86825363 None:intergenic
GCAGGATGAAGGAGAAAGAA+GGG 0.427205 4:+86824128 MsG0480023555.01.T01:intron
TACCGAATTGAGTCGAGGAT+TGG 0.448746 4:-86823948 None:intergenic
GAAAGAAGGGTAGGGCAAGA+AGG 0.462834 4:+86824141 MsG0480023555.01.T01:CDS
TTGGTTGGATTGGAGAAAGT+GGG 0.463944 4:+86828210 MsG0480023555.01.T01:CDS
TGCAGGATGAAGGAGAAAGA+AGG 0.476106 4:+86824127 MsG0480023555.01.T01:intron
AGAAAGTGGGAAAAGGTGAT+TGG 0.482958 4:+86828223 MsG0480023555.01.T01:CDS
AGTAGAGAGTGAAGGTGAGA+GGG 0.486297 4:+86824191 MsG0480023555.01.T01:CDS
TTTATGGTATTGCAGGATGA+AGG 0.487642 4:+86824117 MsG0480023555.01.T01:intron
TAATCTATTAAGAGATCAAT+CGG 0.488791 4:+86823886 MsG0480023555.01.T01:CDS
AGAGAGTGAAGGTGAGAGGG+AGG 0.500091 4:+86824194 MsG0480023555.01.T01:CDS
AACGCATACCGAGGGATCGA+AGG 0.511646 4:-86825425 None:intergenic
AAGTAGAGAGTGAAGGTGAG+AGG 0.514958 4:+86824190 MsG0480023555.01.T01:CDS
TTCGGCTTGATTCGGAGTCT+CGG 0.518270 4:-86825323 None:intergenic
TGTGGTAGCGAAGGTATACT+AGG 0.521572 4:+86826295 MsG0480023555.01.T01:CDS
GATGGTGATATCAAAGAGAC+TGG 0.526759 4:-86828355 None:intergenic
TTTGGTTGGATTGGAGAAAG+TGG 0.531455 4:+86828209 MsG0480023555.01.T01:CDS
GATGTCGGCGATGATACGTT+CGG 0.535062 4:-86825341 None:intergenic
GAAGATTGTTGATTCTGTTG+GGG 0.539841 4:+86826330 MsG0480023555.01.T01:CDS
GATGAAGGAGAAAGAAGGGT+AGG 0.549483 4:+86824132 MsG0480023555.01.T01:CDS
TCTTTGACGAAAACTTGAAG+AGG 0.550619 4:-86825372 None:intergenic
GCTTTGGTTATGGGTAGCAG+AGG 0.552540 4:+86826367 MsG0480023555.01.T01:CDS
AACAGGTCAAGAATCAAGAT+AGG 0.553293 4:+86829846 MsG0480023555.01.T01:CDS
GAAGAGGCTGATTCGGATGT+CGG 0.556652 4:-86825356 None:intergenic
TGAAACGACACGGTCGCGGA+AGG 0.560184 4:+86825571 MsG0480023555.01.T01:CDS
ATTAAGAGATCAATCGGAAG+AGG 0.560889 4:+86823892 MsG0480023555.01.T01:CDS
GGATTGGAGAAAGTGGGAAA+AGG 0.562648 4:+86828216 MsG0480023555.01.T01:CDS
GAAGAAGAAGTAGAGAGTGA+AGG 0.574931 4:+86824183 MsG0480023555.01.T01:CDS
TTGTGCTCTTCCTCAGTCCA+CGG 0.578432 4:-86828180 None:intergenic
TTAGTGAAACGACACGGTCG+CGG 0.578872 4:+86825567 MsG0480023555.01.T01:CDS
TATCAAAGAGACTGGATCTA+CGG 0.592657 4:-86828347 None:intergenic
AGGGTAGGGCAAGAAGGTGA+AGG 0.602332 4:+86824147 MsG0480023555.01.T01:CDS
ATGAAGGAGAAAGAAGGGTA+GGG 0.605509 4:+86824133 MsG0480023555.01.T01:CDS
GGGCAAGAAGGTGAAGGACA+AGG 0.613410 4:+86824153 MsG0480023555.01.T01:CDS
GTGATTGGAGAGGAATCTCA+AGG 0.619264 4:+86828238 MsG0480023555.01.T01:CDS
GTGGGAAAAGGTGATTGGAG+AGG 0.624127 4:+86828228 MsG0480023555.01.T01:CDS
TGAATGGATCAGGGATTCCG+TGG 0.626840 4:+86828163 MsG0480023555.01.T01:intron
GGCGATTGAGATTACTTCGG+CGG 0.629813 4:-86828320 None:intergenic
TTCGTTCATTGACAGAAACA+GGG 0.636822 4:+86825291 MsG0480023555.01.T01:intron
GCATGACTTGCAACATGCGT+AGG 0.636946 4:-86828282 None:intergenic
ATAGGTGACTGTGGTAGCGA+AGG 0.640999 4:+86826286 MsG0480023555.01.T01:intron
GACGGCGATTGAGATTACTT+CGG 0.641222 4:-86828323 None:intergenic
TTAGGTATCTGCAATTCCAG+TGG 0.643696 4:+86829817 MsG0480023555.01.T01:intron
CTTTGATATCACCATCGACA+CGG 0.646904 4:+86828362 MsG0480023555.01.T01:CDS
GGTATCTGCAATTCCAGTGG+AGG 0.652641 4:+86829820 MsG0480023555.01.T01:intron
AATCTTACCGAATTGAGTCG+AGG 0.654505 4:-86823953 None:intergenic
ATCAGGGATTCCGTGGACTG+AGG 0.660333 4:+86828170 MsG0480023555.01.T01:intron
TCGTTCATTGACAGAAACAG+GGG 0.681754 4:+86825292 MsG0480023555.01.T01:intron
AGAGACTGGATCTACGGCGA+CGG 0.684123 4:-86828341 None:intergenic
GAATTGTGTATAGGTGACTG+TGG 0.689157 4:+86826277 MsG0480023555.01.T01:intron
GAATTCTTAGTGAAACGACA+CGG 0.763227 4:+86825561 MsG0480023555.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAGAATATAATAGTTTAA+GGG - Chr4:86827440-86827459 None:intergenic 10.0%
!! TTTGTTACAAAATAAAATAT+CGG + Chr4:86826471-86826490 MsG0480023555.01.T01:intron 10.0%
!!! AATTAAAACAAAATTTTATC+AGG - Chr4:86824280-86824299 None:intergenic 10.0%
!! AAAGAATATAATAGTTTAAG+GGG - Chr4:86827439-86827458 None:intergenic 15.0%
!! AACTAAAAAGAAAAAAATAC+AGG - Chr4:86826813-86826832 None:intergenic 15.0%
!! AACTAATTGAATACAAATTT+AGG - Chr4:86828435-86828454 None:intergenic 15.0%
!! AATAAGAAAGAAATAATGTT+TGG - Chr4:86829166-86829185 None:intergenic 15.0%
!! AATTAACCAAAATTTGTAAA+TGG - Chr4:86824418-86824437 None:intergenic 15.0%
!! ACTAAAAAGAAAAAAAATAC+AGG - Chr4:86826905-86826924 None:intergenic 15.0%
!! AGTATTTCTTATAATATGTA+TGG + Chr4:86829454-86829473 MsG0480023555.01.T01:intron 15.0%
!! ATAAAAAAATCAATTGAATC+AGG + Chr4:86825759-86825778 MsG0480023555.01.T01:intron 15.0%
!! CAAAAATAATAAAAATTGGA+TGG - Chr4:86827605-86827624 None:intergenic 15.0%
!! CTTGCAAAAATAATAAAAAT+TGG - Chr4:86827609-86827628 None:intergenic 15.0%
!! GAAAAGAATATAATAGTTTA+AGG - Chr4:86827441-86827460 None:intergenic 15.0%
!! TAATCATATAAATGAGTATT+TGG - Chr4:86826660-86826679 None:intergenic 15.0%
!! TACTATATGTAAATAAAGTA+CGG + Chr4:86826015-86826034 MsG0480023555.01.T01:intron 15.0%
!! TTAATTCCAATGTATAATAA+TGG - Chr4:86826729-86826748 None:intergenic 15.0%
!!! AATTTTCTCTGTTATTTTTT+TGG + Chr4:86828499-86828518 MsG0480023555.01.T01:intron 15.0%
!!! ATCATATTTGAAATTTGAAA+TGG + Chr4:86824090-86824109 MsG0480023555.01.T01:intron 15.0%
!!! ATTTTGTATTATAAACCTAA+AGG - Chr4:86828655-86828674 None:intergenic 15.0%
!!! TAATCAATAAAGTAGTATTT+TGG + Chr4:86828457-86828476 MsG0480023555.01.T01:intron 15.0%
!!! TCTTATTTGAATTTTATTCA+TGG + Chr4:86829113-86829132 MsG0480023555.01.T01:intron 15.0%
!!! TGTTTTGATTAATTAATGTT+TGG + Chr4:86826200-86826219 MsG0480023555.01.T01:intron 15.0%
!!! TTAAGTCATTCATTTTTAAA+TGG + Chr4:86828728-86828747 MsG0480023555.01.T01:intron 15.0%
!!! TTTTTTAATTATCGATTAGT+GGG + Chr4:86826163-86826182 MsG0480023555.01.T01:intron 15.0%
!!! TTTTTTTAATTATCGATTAG+TGG + Chr4:86826162-86826181 MsG0480023555.01.T01:intron 15.0%
!! AAAATCAATCAAAAAAACAC+CGG - Chr4:86825507-86825526 None:intergenic 20.0%
!! AAATAAATGCATAAAGAAGA+AGG - Chr4:86824606-86824625 None:intergenic 20.0%
!! AAGTGATTCATTTGTTTAAA+TGG + Chr4:86828615-86828634 MsG0480023555.01.T01:intron 20.0%
!! AATAATGTAGAATTTCCATA+AGG - Chr4:86824930-86824949 None:intergenic 20.0%
!! AATACTCTAAATTAAGCATA+AGG - Chr4:86829440-86829459 None:intergenic 20.0%
!! AGAAATTTGAACTATTGTAA+AGG + Chr4:86828574-86828593 MsG0480023555.01.T01:intron 20.0%
!! AGAACAAAACAATTATAGAA+TGG - Chr4:86824310-86824329 None:intergenic 20.0%
!! ATTTCAATCAATTCAAACAA+AGG - Chr4:86828113-86828132 None:intergenic 20.0%
!! CAATAGTTCAAATTTCTAAA+TGG - Chr4:86828571-86828590 None:intergenic 20.0%
!! CTTATAATATTTGATGTATC+TGG + Chr4:86829584-86829603 MsG0480023555.01.T01:intron 20.0%
!! GAACAAAACAATTATAGAAT+GGG - Chr4:86824309-86824328 None:intergenic 20.0%
!! GAACATGTTTAAAAAAGATA+AGG - Chr4:86825707-86825726 None:intergenic 20.0%
!! GATTAATTAATGTTTGGATT+TGG + Chr4:86826206-86826225 MsG0480023555.01.T01:intron 20.0%
!! TAATCTATTAAGAGATCAAT+CGG + Chr4:86823886-86823905 MsG0480023555.01.T01:CDS 20.0%
!! TATTGAACCAAAAATATTCA+TGG - Chr4:86827549-86827568 None:intergenic 20.0%
!! TTCAAAAAATATGAAACTGT+AGG + Chr4:86824460-86824479 MsG0480023555.01.T01:intron 20.0%
!!! AATTTGAAATGGTGAATTTA+TGG + Chr4:86824101-86824120 MsG0480023555.01.T01:intron 20.0%
!!! AGATTTTTTTTGAAGAACAT+TGG + Chr4:86829324-86829343 MsG0480023555.01.T01:intron 20.0%
!!! ATTGATTTTTTCGATTTGAT+AGG + Chr4:86825518-86825537 MsG0480023555.01.T01:intron 20.0%
!!! GTAATAAAAGTTGATGTATT+TGG + Chr4:86829694-86829713 MsG0480023555.01.T01:intron 20.0%
!!! GTGTTTTAGAATTTAGATTT+AGG + Chr4:86824746-86824765 MsG0480023555.01.T01:intron 20.0%
!!! TATGTTTTATATGTGTTGAA+AGG + Chr4:86825143-86825162 MsG0480023555.01.T01:intron 20.0%
!!! TGTTATTGATTTTCTTTGAA+TGG + Chr4:86828147-86828166 MsG0480023555.01.T01:intron 20.0%
!!! TTATAGACCATGAATATTTT+TGG + Chr4:86827539-86827558 MsG0480023555.01.T01:intron 20.0%
!!! TTTTTATAAGATGTTTGTTG+AGG + Chr4:86826241-86826260 MsG0480023555.01.T01:intron 20.0%
! AAAAAATCACACAAACACAA+AGG - Chr4:86826434-86826453 None:intergenic 25.0%
! AAAAGAATGATCTTGAATAG+AGG - Chr4:86827114-86827133 None:intergenic 25.0%
! AAAGCTACAAATTCAACTTA+CGG - Chr4:86828782-86828801 None:intergenic 25.0%
! AACAACTTTGTGTTTATGTT+AGG + Chr4:86829799-86829818 MsG0480023555.01.T01:intron 25.0%
! AATATCTACTTAAAATCCTG+AGG - Chr4:86827962-86827981 None:intergenic 25.0%
! ACAAAATTTGAATGAAGCTA+GGG - Chr4:86824019-86824038 None:intergenic 25.0%
! ACAAATATCTCCAATCAAAA+AGG - Chr4:86826046-86826065 None:intergenic 25.0%
! ACTTAAGATGAATTGTGTAT+AGG + Chr4:86826268-86826287 MsG0480023555.01.T01:intron 25.0%
! ATATAGAAGTAGCTTCAAAA+TGG + Chr4:86824367-86824386 MsG0480023555.01.T01:intron 25.0%
! ATCAAGCCATTATTATACAT+TGG + Chr4:86826720-86826739 MsG0480023555.01.T01:intron 25.0%
! ATTACCCAGATATGAAATTA+TGG - Chr4:86826545-86826564 None:intergenic 25.0%
! ATTGGATTCGTATTCATATT+CGG - Chr4:86823933-86823952 None:intergenic 25.0%
! CAAATATCTCCAATCAAAAA+GGG - Chr4:86826045-86826064 None:intergenic 25.0%
! CAACATTAATCCAATATATC+TGG + Chr4:86827065-86827084 MsG0480023555.01.T01:intron 25.0%
! CATGTTTAAAAAAGATAAGG+TGG - Chr4:86825704-86825723 None:intergenic 25.0%
! GTTCAATATTAATTGTGTCT+TGG + Chr4:86827561-86827580 MsG0480023555.01.T01:intron 25.0%
! TAAGCCATAATTTCATATCT+GGG + Chr4:86826538-86826557 MsG0480023555.01.T01:intron 25.0%
! TATGTCTTATATGTGTTGAA+AGG + Chr4:86824896-86824915 MsG0480023555.01.T01:intron 25.0%
! TATTCGTTTGTTTATGCATT+TGG + Chr4:86824064-86824083 MsG0480023555.01.T01:intron 25.0%
! TTACAAATTCAATGTAGCTA+GGG - Chr4:86828694-86828713 None:intergenic 25.0%
! TTCTTTCACTCAATTAAGTA+CGG + Chr4:86825661-86825680 MsG0480023555.01.T01:intron 25.0%
! TTTCTATGACTAATTCACAT+TGG + Chr4:86827131-86827150 MsG0480023555.01.T01:intron 25.0%
!! ACATTCGATTATGTATTTTC+CGG + Chr4:86827021-86827040 MsG0480023555.01.T01:intron 25.0%
!! GCTTAACCATTTACAAATTT+TGG + Chr4:86824409-86824428 MsG0480023555.01.T01:intron 25.0%
!! TCTCACATTTAAATGGTTTT+TGG + Chr4:86828018-86828037 MsG0480023555.01.T01:intron 25.0%
!! TTGTTATTAACAGCATAAAG+TGG + Chr4:86827206-86827225 MsG0480023555.01.T01:intron 25.0%
!!! ATTAGTGCTGTTATTTTTCA+TGG + Chr4:86828859-86828878 MsG0480023555.01.T01:intron 25.0%
!!! CGATTTTGATATCACAATTA+GGG + Chr4:86825470-86825489 MsG0480023555.01.T01:intron 25.0%
!!! TAGTGTTTTTAAATCACTGT+TGG - Chr4:86829554-86829573 None:intergenic 25.0%
!!! TCGATTTTGATATCACAATT+AGG + Chr4:86825469-86825488 MsG0480023555.01.T01:intron 25.0%
!!! TGTATGGTTTTTTTAATTGC+AGG + Chr4:86829470-86829489 MsG0480023555.01.T01:intron 25.0%
!!! TTTTGATTGGAGATATTTGT+TGG + Chr4:86826046-86826065 MsG0480023555.01.T01:intron 25.0%
!!! TTTTTTCGATTTGATAGGAA+AGG + Chr4:86825523-86825542 MsG0480023555.01.T01:intron 25.0%
!!! TTTTTTCTTCATATTTGACG+AGG + Chr4:86826608-86826627 MsG0480023555.01.T01:intron 25.0%
AAAGTAGTAGTACCTTTGTA+TGG - Chr4:86826401-86826420 None:intergenic 30.0%
AAGTAAAGCCTTGAATCATT+TGG + Chr4:86828923-86828942 MsG0480023555.01.T01:intron 30.0%
AATCAAATGAAGTTGAATGG+TGG + Chr4:86827229-86827248 MsG0480023555.01.T01:intron 30.0%
AATGCAGCACAATTCAAAAT+TGG - Chr4:86827814-86827833 None:intergenic 30.0%
ACACATTTGTAACGCAAAAA+GGG - Chr4:86824728-86824747 None:intergenic 30.0%
AGGTCATTAGTACATATTGT+TGG + Chr4:86829087-86829106 MsG0480023555.01.T01:intron 30.0%
ATAACTACATCTTATGCAAG+AGG + Chr4:86827901-86827920 MsG0480023555.01.T01:intron 30.0%
ATAATAGTTTAAGGGGAATG+TGG - Chr4:86827432-86827451 None:intergenic 30.0%
ATCAAATGAAGTTGAATGGT+GGG + Chr4:86827230-86827249 MsG0480023555.01.T01:intron 30.0%
ATGCATTTCAAGAGTTTACT+CGG + Chr4:86829619-86829638 MsG0480023555.01.T01:intron 30.0%
ATGTACTAATGACCTATCAA+AGG - Chr4:86829082-86829101 None:intergenic 30.0%
CAAATTGACAAAAAACACAC+AGG - Chr4:86827748-86827767 None:intergenic 30.0%
CACAAAATTTGAATGAAGCT+AGG - Chr4:86824020-86824039 None:intergenic 30.0%
CTAAGCCATAATTTCATATC+TGG + Chr4:86826537-86826556 MsG0480023555.01.T01:intron 30.0%
CTACATGTCTCACATTTAAA+TGG + Chr4:86828011-86828030 MsG0480023555.01.T01:intron 30.0%
CTTACAAATTCAATGTAGCT+AGG - Chr4:86828695-86828714 None:intergenic 30.0%
GGAAAATACATAATCGAATG+TGG - Chr4:86827022-86827041 None:intergenic 30.0%
GTGCTGCATTATTCATTTAT+GGG + Chr4:86827824-86827843 MsG0480023555.01.T01:intron 30.0%
GTTCATTATGTTAGTCCTTT+AGG + Chr4:86828637-86828656 MsG0480023555.01.T01:intron 30.0%
TACAAATTCAACTTACGGTA+AGG - Chr4:86828777-86828796 None:intergenic 30.0%
TAGGCATTCAAGAATGTAAT+AGG - Chr4:86824790-86824809 None:intergenic 30.0%
TCTGTTTAGAAAGCTATTTG+TGG + Chr4:86829385-86829404 MsG0480023555.01.T01:intron 30.0%
TGGAATCAAATGAAGTTGAA+TGG + Chr4:86827226-86827245 MsG0480023555.01.T01:intron 30.0%
TGTGCTGCATTATTCATTTA+TGG + Chr4:86827823-86827842 MsG0480023555.01.T01:intron 30.0%
TGTTACTAAAACACACATGT+AGG - Chr4:86824809-86824828 None:intergenic 30.0%
TTTAATCTTTCATCTCTAGC+AGG + Chr4:86827643-86827662 MsG0480023555.01.T01:intron 30.0%
! GATTTTCTTTGAATGGATCA+GGG + Chr4:86828154-86828173 MsG0480023555.01.T01:intron 30.0%
! GCTTGACTTTATAGTCTTTT+AGG + Chr4:86825982-86826001 MsG0480023555.01.T01:intron 30.0%
! GTTCTATCAATTCCTGTTTT+AGG + Chr4:86825723-86825742 MsG0480023555.01.T01:intron 30.0%
! TGATTTTCTTTGAATGGATC+AGG + Chr4:86828153-86828172 MsG0480023555.01.T01:intron 30.0%
! TTGCATCTCATTACAGATTT+TGG + Chr4:86824436-86824455 MsG0480023555.01.T01:intron 30.0%
! TTTGTACCTTTTACTACTGT+TGG + Chr4:86828824-86828843 MsG0480023555.01.T01:intron 30.0%
!! AGAAGATTGTTGATTCTGTT+GGG + Chr4:86826329-86826348 MsG0480023555.01.T01:CDS 30.0%
!! AGCTTTAGAAACATCAATTG+CGG + Chr4:86824491-86824510 MsG0480023555.01.T01:intron 30.0%
!! ATACAAAGGTACTACTACTT+TGG + Chr4:86826400-86826419 MsG0480023555.01.T01:intron 30.0%
!! TTCCATGCAACATCATTTTT+AGG + Chr4:86825401-86825420 MsG0480023555.01.T01:CDS 30.0%
!!! ACTCTGCAACAAACATTTTT+TGG - Chr4:86827694-86827713 None:intergenic 30.0%
!!! GTTTTTTGTCAATTTGCTTC+TGG + Chr4:86827752-86827771 MsG0480023555.01.T01:intron 30.0%
!!! TGCTTTTTTCCACCTAAAAT+AGG - Chr4:86825918-86825937 None:intergenic 30.0%
AAAACTTGAAGAGGCTGATT+CGG - Chr4:86825366-86825385 None:intergenic 35.0%
AAACTAAAAACGCATACCGA+GGG - Chr4:86825436-86825455 None:intergenic 35.0%
AAAGCTTGATGCTTTGGTTA+TGG + Chr4:86826357-86826376 MsG0480023555.01.T01:CDS 35.0%
AAATTCAACTTACGGTAAGG+TGG - Chr4:86828774-86828793 None:intergenic 35.0%
AAATTGGAATTCGGCGAAAT+TGG + Chr4:86825605-86825624 MsG0480023555.01.T01:CDS 35.0%
AACAGGTCAAGAATCAAGAT+AGG + Chr4:86829846-86829865 MsG0480023555.01.T01:CDS 35.0%
AAGCTTGATGCTTTGGTTAT+GGG + Chr4:86826358-86826377 MsG0480023555.01.T01:CDS 35.0%
AATCTCCTATGACCTAAAAC+AGG - Chr4:86825738-86825757 None:intergenic 35.0%
AATTCAACTTACGGTAAGGT+GGG - Chr4:86828773-86828792 None:intergenic 35.0%
ACAAAAAACACACAGGATAG+GGG - Chr4:86827741-86827760 None:intergenic 35.0%
AGCAGCAAAAAAGAGTTATG+GGG + Chr4:86827280-86827299 MsG0480023555.01.T01:intron 35.0%
ATTAAGAGATCAATCGGAAG+AGG + Chr4:86823892-86823911 MsG0480023555.01.T01:CDS 35.0%
CACACATTTGTAACGCAAAA+AGG - Chr4:86824729-86824748 None:intergenic 35.0%
CACCAAATAGTACCTTTGAT+AGG + Chr4:86829067-86829086 MsG0480023555.01.T01:intron 35.0%
CATTAAAGGTTGTTTACCTC+AGG + Chr4:86827943-86827962 MsG0480023555.01.T01:intron 35.0%
GAATGATCTTGAATAGAGGA+TGG - Chr4:86827110-86827129 None:intergenic 35.0%
GAATTCTTAGTGAAACGACA+CGG + Chr4:86825561-86825580 MsG0480023555.01.T01:CDS 35.0%
GACAAAAAACACACAGGATA+GGG - Chr4:86827742-86827761 None:intergenic 35.0%
GAGCAGCAAAAAAGAGTTAT+GGG + Chr4:86827279-86827298 MsG0480023555.01.T01:intron 35.0%
GATCAAATGAAGTTGAATGG+TGG + Chr4:86827252-86827271 MsG0480023555.01.T01:intron 35.0%
GATGGAGCAAATTGAAACAA+AGG - Chr4:86827587-86827606 None:intergenic 35.0%
GTCCTAAAAATGATGTTGCA+TGG - Chr4:86825406-86825425 None:intergenic 35.0%
GTTGAAAGTGAAACTCAATG+AGG - Chr4:86824698-86824717 None:intergenic 35.0%
TAACAACAACATATTGTCGC+CGG - Chr4:86827043-86827062 None:intergenic 35.0%
TACGAACCAACAGTAGTAAA+AGG - Chr4:86828833-86828852 None:intergenic 35.0%
TATCAAAGAGACTGGATCTA+CGG - Chr4:86828350-86828369 None:intergenic 35.0%
TCAAATGAAGTTGAATGGTG+GGG + Chr4:86827231-86827250 MsG0480023555.01.T01:intron 35.0%
TCACTTGGATTGAGCATTAA+AGG + Chr4:86827929-86827948 MsG0480023555.01.T01:intron 35.0%
TCCATGCTACATGTCATTAA+TGG - Chr4:86828964-86828983 None:intergenic 35.0%
TCCATTAATGACATGTAGCA+TGG + Chr4:86828960-86828979 MsG0480023555.01.T01:intron 35.0%
TCTTTGACGAAAACTTGAAG+AGG - Chr4:86825375-86825394 None:intergenic 35.0%
TGACAAAAAACACACAGGAT+AGG - Chr4:86827743-86827762 None:intergenic 35.0%
TGAGCAGCAAAAAAGAGTTA+TGG + Chr4:86827278-86827297 MsG0480023555.01.T01:intron 35.0%
TGGGATCAAATGAAGTTGAA+TGG + Chr4:86827249-86827268 MsG0480023555.01.T01:intron 35.0%
TGGTGAATTTATGGTATTGC+AGG + Chr4:86824110-86824129 MsG0480023555.01.T01:intron 35.0%
TGTAGAATGAAGAAGCTATC+TGG + Chr4:86825826-86825845 MsG0480023555.01.T01:intron 35.0%
TTCATATCTGGGTAATCAAC+AGG + Chr4:86826549-86826568 MsG0480023555.01.T01:intron 35.0%
TTCGTTCATTGACAGAAACA+GGG + Chr4:86825291-86825310 MsG0480023555.01.T01:intron 35.0%
TTTAGAAACATCAATTGCGG+TGG + Chr4:86824494-86824513 MsG0480023555.01.T01:intron 35.0%
TTTATGGTATTGCAGGATGA+AGG + Chr4:86824117-86824136 MsG0480023555.01.T01:intron 35.0%
TTTCGTTCATTGACAGAAAC+AGG + Chr4:86825290-86825309 MsG0480023555.01.T01:intron 35.0%
TTTGGCACAAAGTTCAGATT+AGG - Chr4:86826642-86826661 None:intergenic 35.0%
! AATTAGGGTTTTTGTATCGC+CGG + Chr4:86825485-86825504 MsG0480023555.01.T01:intron 35.0%
! AGAGCTCTTCTTCCTATTTT+AGG + Chr4:86825903-86825922 MsG0480023555.01.T01:intron 35.0%
! GGATTTAAAGCTTGATGCTT+TGG + Chr4:86826351-86826370 MsG0480023555.01.T01:CDS 35.0%
!! AAGGTACTATTTGGTGCATA+AGG - Chr4:86829063-86829082 None:intergenic 35.0%
!! CAATTCCTGTTTTAGGTCAT+AGG + Chr4:86825730-86825749 MsG0480023555.01.T01:intron 35.0%
!! CAATTTGCTTCTGGTTTGTA+AGG + Chr4:86827761-86827780 MsG0480023555.01.T01:intron 35.0%
!! GAAGATTGTTGATTCTGTTG+GGG + Chr4:86826330-86826349 MsG0480023555.01.T01:CDS 35.0%
!! GACCTATCAAAGGTACTATT+TGG - Chr4:86829072-86829091 None:intergenic 35.0%
!! GAGAAGATTGTTGATTCTGT+TGG + Chr4:86826328-86826347 MsG0480023555.01.T01:CDS 35.0%
!! TAGCAGGTTTGTTACTTACA+AGG + Chr4:86827784-86827803 MsG0480023555.01.T01:intron 35.0%
!! TCTTAGCCTTTTTGTATGGT+GGG - Chr4:86824864-86824883 None:intergenic 35.0%
!! TTTTGGGGGAAATTGGAATT+CGG + Chr4:86825596-86825615 MsG0480023555.01.T01:CDS 35.0%
!!! CAAGATGTTTTTGGTTGGAT+TGG + Chr4:86828200-86828219 MsG0480023555.01.T01:CDS 35.0%
!!! CATCGACACGGTAATTTTTT+CGG + Chr4:86828374-86828393 MsG0480023555.01.T01:intron 35.0%
!!! GGTGGTCTATTGATTCTTTT+GGG - Chr4:86827347-86827366 None:intergenic 35.0%
!!! GTGGTCTATTGATTCTTTTG+GGG - Chr4:86827346-86827365 None:intergenic 35.0%
!!! TATTGATTCTTTTGGGGTTG+CGG - Chr4:86827340-86827359 None:intergenic 35.0%
AAAGAGTAATGCAACCGTAC+AGG - Chr4:86826516-86826535 None:intergenic 40.0%
AAGAGTAATGCAACCGTACA+GGG - Chr4:86826515-86826534 None:intergenic 40.0%
AATCTTACCGAATTGAGTCG+AGG - Chr4:86823956-86823975 None:intergenic 40.0%
ACGATTCTGATGACATGGAA+TGG + Chr4:86827371-86827390 MsG0480023555.01.T01:intron 40.0%
AGAAAGTGGGAAAAGGTGAT+TGG + Chr4:86828223-86828242 MsG0480023555.01.T01:CDS 40.0%
AGTGGCTCGAATCTTAATCA+AGG + Chr4:86824569-86824588 MsG0480023555.01.T01:intron 40.0%
ATCCAATCCTCGACTCAATT+CGG + Chr4:86823946-86823965 MsG0480023555.01.T01:CDS 40.0%
ATGAAGGAGAAAGAAGGGTA+GGG + Chr4:86824133-86824152 MsG0480023555.01.T01:CDS 40.0%
ATGCAAGAGGAACTTTCACT+TGG + Chr4:86827914-86827933 MsG0480023555.01.T01:intron 40.0%
ATTCAACTTACGGTAAGGTG+GGG - Chr4:86828772-86828791 None:intergenic 40.0%
CAAAAAACACACAGGATAGG+GGG - Chr4:86827740-86827759 None:intergenic 40.0%
CATGTCATCAGAATCGTTCA+CGG - Chr4:86827368-86827387 None:intergenic 40.0%
CATTCTCTCTGAGCAAACAA+TGG + Chr4:86827988-86828007 MsG0480023555.01.T01:intron 40.0%
CCATACAAAAAGGCTAAGAG+AGG + Chr4:86824865-86824884 MsG0480023555.01.T01:intron 40.0%
CGAAAAAATTACCGTGTCGA+TGG - Chr4:86828376-86828395 None:intergenic 40.0%
CTTTGATATCACCATCGACA+CGG + Chr4:86828362-86828381 MsG0480023555.01.T01:CDS 40.0%
GAAACTAAAAACGCATACCG+AGG - Chr4:86825437-86825456 None:intergenic 40.0%
GAAGAAAGTTGACGCATAGA+TGG - Chr4:86826998-86827017 None:intergenic 40.0%
GAAGAAGAAGTAGAGAGTGA+AGG + Chr4:86824183-86824202 MsG0480023555.01.T01:CDS 40.0%
GAATGAAGATCCTGCAAACT+TGG + Chr4:86829024-86829043 MsG0480023555.01.T01:intron 40.0%
GAATTGTGTATAGGTGACTG+TGG + Chr4:86826277-86826296 MsG0480023555.01.T01:intron 40.0%
GATGGTGATATCAAAGAGAC+TGG - Chr4:86828358-86828377 None:intergenic 40.0%
GCAGTACACCAAATGATTCA+AGG - Chr4:86828934-86828953 None:intergenic 40.0%
GTCCATACTAACACAACTTG+CGG - Chr4:86829523-86829542 None:intergenic 40.0%
GTGGCTCGAATCTTAATCAA+GGG + Chr4:86824570-86824589 MsG0480023555.01.T01:intron 40.0%
TACTGCTTCTAGACAGAAAC+AGG + Chr4:86826139-86826158 MsG0480023555.01.T01:intron 40.0%
TCAAATCCAACCAAGTTTGC+AGG - Chr4:86829037-86829056 None:intergenic 40.0%
TCAAATCTAGCTGCATGGTT+GGG + Chr4:86829254-86829273 MsG0480023555.01.T01:intron 40.0%
TCCATACTAACACAACTTGC+GGG - Chr4:86829522-86829541 None:intergenic 40.0%
TCGTTCATTGACAGAAACAG+GGG + Chr4:86825292-86825311 MsG0480023555.01.T01:intron 40.0%
TCTACTCCCACCATACAAAA+AGG + Chr4:86824855-86824874 MsG0480023555.01.T01:intron 40.0%
TGAAAGGAGATGCTTCCTTA+TGG + Chr4:86824912-86824931 MsG0480023555.01.T01:intron 40.0%
TGACTTCAAATCTAGCTGCA+TGG + Chr4:86829249-86829268 MsG0480023555.01.T01:intron 40.0%
TGTAGCTAGGGACTTTCATT+AGG - Chr4:86828682-86828701 None:intergenic 40.0%
TTAGGTATCTGCAATTCCAG+TGG + Chr4:86829817-86829836 MsG0480023555.01.T01:intron 40.0%
TTCAAATCTAGCTGCATGGT+TGG + Chr4:86829253-86829272 MsG0480023555.01.T01:intron 40.0%
TTGGTTTCGTGAGAAGAATG+TGG + Chr4:86826065-86826084 MsG0480023555.01.T01:intron 40.0%
! ATGATACGTTCGGCTTGATT+CGG - Chr4:86825334-86825353 None:intergenic 40.0%
! CTGTTATCAAAAGTGTGCGA+AGG - Chr4:86829142-86829161 None:intergenic 40.0%
! TACGGAGTTCCCTTTTTGAT+TGG + Chr4:86826033-86826052 MsG0480023555.01.T01:intron 40.0%
! TTGGTTGGATTGGAGAAAGT+GGG + Chr4:86828210-86828229 MsG0480023555.01.T01:CDS 40.0%
! TTTGGTTGGATTGGAGAAAG+TGG + Chr4:86828209-86828228 MsG0480023555.01.T01:CDS 40.0%
!! CCTCTCTTAGCCTTTTTGTA+TGG - Chr4:86824868-86824887 None:intergenic 40.0%
!! CTCTTAGCCTTTTTGTATGG+TGG - Chr4:86824865-86824884 None:intergenic 40.0%
!! GAAGGATTTTTGGGGGAAAT+TGG + Chr4:86825589-86825608 MsG0480023555.01.T01:CDS 40.0%
!! GCTCTTCTTCCTATTTTAGG+TGG + Chr4:86825906-86825925 MsG0480023555.01.T01:intron 40.0%
!! GGAAGAGCACAAGATGTTTT+TGG + Chr4:86828191-86828210 MsG0480023555.01.T01:CDS 40.0%
!!! CGGTGGTCTATTGATTCTTT+TGG - Chr4:86827348-86827367 None:intergenic 40.0%
!!! GAGCACAAGATGTTTTTGGT+TGG + Chr4:86828195-86828214 MsG0480023555.01.T01:CDS 40.0%
AAGTAGAGAGTGAAGGTGAG+AGG + Chr4:86824190-86824209 MsG0480023555.01.T01:CDS 45.0%
AATGTGGCTTACATGATCGG+GGG - Chr4:86827416-86827435 None:intergenic 45.0%
AGTAGAGAGTGAAGGTGAGA+GGG + Chr4:86824191-86824210 MsG0480023555.01.T01:CDS 45.0%
ATGTCCAAAACCTCAGCATC+AGG - Chr4:86826113-86826132 None:intergenic 45.0%
CATCAGGTTCCACTTCATAC+TGG - Chr4:86826097-86826116 None:intergenic 45.0%
CGTGAACGATTCTGATGACA+TGG + Chr4:86827366-86827385 MsG0480023555.01.T01:intron 45.0%
CTTGCAGAACTATCCCTGTA+CGG + Chr4:86826499-86826518 MsG0480023555.01.T01:intron 45.0%
GAAGATCCTGCAAACTTGGT+TGG + Chr4:86829028-86829047 MsG0480023555.01.T01:intron 45.0%
GAATGTGGCTTACATGATCG+GGG - Chr4:86827417-86827436 None:intergenic 45.0%
GACGGCGATTGAGATTACTT+CGG - Chr4:86828326-86828345 None:intergenic 45.0%
GAGGATGGACACATTGTTGT+TGG - Chr4:86827095-86827114 None:intergenic 45.0%
GATGAAGGAGAAAGAAGGGT+AGG + Chr4:86824132-86824151 MsG0480023555.01.T01:CDS 45.0%
GCAGGATGAAGGAGAAAGAA+GGG + Chr4:86824128-86824147 MsG0480023555.01.T01:intron 45.0%
GGAATGTGGCTTACATGATC+GGG - Chr4:86827418-86827437 None:intergenic 45.0%
GGATTGGAGAAAGTGGGAAA+AGG + Chr4:86828216-86828235 MsG0480023555.01.T01:CDS 45.0%
GGGAATGTGGCTTACATGAT+CGG - Chr4:86827419-86827438 None:intergenic 45.0%
GTGATTGGAGAGGAATCTCA+AGG + Chr4:86828238-86828257 MsG0480023555.01.T01:CDS 45.0%
GTTATGGGTAGCAGAGGTTT+GGG + Chr4:86826373-86826392 MsG0480023555.01.T01:intron 45.0%
TACCACCGCAAAAACCATCA+CGG - Chr4:86824540-86824559 None:intergenic 45.0%
TACCGAATTGAGTCGAGGAT+TGG - Chr4:86823951-86823970 None:intergenic 45.0%
TGCAGGATGAAGGAGAAAGA+AGG + Chr4:86824127-86824146 MsG0480023555.01.T01:intron 45.0%
TTACATGATCGGGGGATTGA+TGG - Chr4:86827408-86827427 None:intergenic 45.0%
! TGTGGTAGCGAAGGTATACT+AGG + Chr4:86826295-86826314 MsG0480023555.01.T01:CDS 45.0%
! TGTTGGAGCGCCAGATATAT+TGG - Chr4:86827078-86827097 None:intergenic 45.0%
!! CTTCTGGTTTGTAAGGTAGC+AGG + Chr4:86827768-86827787 MsG0480023555.01.T01:intron 45.0%
!! TGACATGGAATGGTGTTGCT+CGG + Chr4:86827381-86827400 MsG0480023555.01.T01:intron 45.0%
!!! TTTTAGGACCTTCGATCCCT+CGG + Chr4:86825417-86825436 MsG0480023555.01.T01:CDS 45.0%
AATTCCAGTGGAGGCAGAAC+AGG + Chr4:86829829-86829848 MsG0480023555.01.T01:CDS 50.0%
GAAAGAAGGGTAGGGCAAGA+AGG + Chr4:86824141-86824160 MsG0480023555.01.T01:CDS 50.0%
GAGTTATGGGGTTCAAAGCC+AGG + Chr4:86827292-86827311 MsG0480023555.01.T01:intron 50.0%
GATGTCGGCGATGATACGTT+CGG - Chr4:86825344-86825363 None:intergenic 50.0%
GCCCGCAAGTTGTGTTAGTA+TGG + Chr4:86829518-86829537 MsG0480023555.01.T01:intron 50.0%
GCGGTGGTAATTGCATGTAG+TGG + Chr4:86824551-86824570 MsG0480023555.01.T01:intron 50.0%
GCTTTGGTTATGGGTAGCAG+AGG + Chr4:86826367-86826386 MsG0480023555.01.T01:CDS 50.0%
GGCGATTGAGATTACTTCGG+CGG - Chr4:86828323-86828342 None:intergenic 50.0%
GGCTGAGAAGAGACTGCTAT+TGG + Chr4:86827845-86827864 MsG0480023555.01.T01:intron 50.0%
GGTATCTGCAATTCCAGTGG+AGG + Chr4:86829820-86829839 MsG0480023555.01.T01:intron 50.0%
GGTTATGGGTAGCAGAGGTT+TGG + Chr4:86826372-86826391 MsG0480023555.01.T01:intron 50.0%
GTCATCAGAATCGTTCACGG+TGG - Chr4:86827365-86827384 None:intergenic 50.0%
GTGGGAAAAGGTGATTGGAG+AGG + Chr4:86828228-86828247 MsG0480023555.01.T01:CDS 50.0%
TGAAGTGGAACCTGATGCTG+AGG + Chr4:86826100-86826119 MsG0480023555.01.T01:intron 50.0%
TGAATGGATCAGGGATTCCG+TGG + Chr4:86828163-86828182 MsG0480023555.01.T01:intron 50.0%
TTAGTGAAACGACACGGTCG+CGG + Chr4:86825567-86825586 MsG0480023555.01.T01:CDS 50.0%
TTGTGCTCTTCCTCAGTCCA+CGG - Chr4:86828183-86828202 None:intergenic 50.0%
! ACGGTCGCGGAAGGATTTTT+GGG + Chr4:86825580-86825599 MsG0480023555.01.T01:CDS 50.0%
! ATAGGTGACTGTGGTAGCGA+AGG + Chr4:86826286-86826305 MsG0480023555.01.T01:intron 50.0%
! GAGGTTTGGGTGCCATACAA+AGG + Chr4:86826386-86826405 MsG0480023555.01.T01:intron 50.0%
! GCATGACTTGCAACATGCGT+AGG - Chr4:86828285-86828304 None:intergenic 50.0%
! GGAACCTGATGCTGAGGTTT+TGG + Chr4:86826106-86826125 MsG0480023555.01.T01:intron 50.0%
!! GAAGAGGCTGATTCGGATGT+CGG - Chr4:86825359-86825378 None:intergenic 50.0%
!! TTCGGCTTGATTCGGAGTCT+CGG - Chr4:86825326-86825345 None:intergenic 50.0%
AACGCATACCGAGGGATCGA+AGG - Chr4:86825428-86825447 None:intergenic 55.0%
ACCGCAAAAACCATCACGGC+GGG - Chr4:86824536-86824555 None:intergenic 55.0%
AGAGACTGGATCTACGGCGA+CGG - Chr4:86828344-86828363 None:intergenic 55.0%
AGAGAGTGAAGGTGAGAGGG+AGG + Chr4:86824194-86824213 MsG0480023555.01.T01:CDS 55.0%
AGGGTAGGGCAAGAAGGTGA+AGG + Chr4:86824147-86824166 MsG0480023555.01.T01:CDS 55.0%
CACCGCAAAAACCATCACGG+CGG - Chr4:86824537-86824556 None:intergenic 55.0%
GGGCAAGAAGGTGAAGGACA+AGG + Chr4:86824153-86824172 MsG0480023555.01.T01:CDS 55.0%
TGGGGTTCAAAGCCAGGAAG+CGG + Chr4:86827298-86827317 MsG0480023555.01.T01:intron 55.0%
TGGTGCGCACCAGTATGAAG+TGG + Chr4:86826085-86826104 MsG0480023555.01.T01:intron 55.0%
TTGACCTGTTCTGCCTCCAC+TGG - Chr4:86829836-86829855 None:intergenic 55.0%
! ATCAGGGATTCCGTGGACTG+AGG + Chr4:86828170-86828189 MsG0480023555.01.T01:intron 55.0%
! CACGGTCGCGGAAGGATTTT+TGG + Chr4:86825579-86825598 MsG0480023555.01.T01:CDS 55.0%
! CGGTCGCGGAAGGATTTTTG+GGG + Chr4:86825581-86825600 MsG0480023555.01.T01:CDS 55.0%
!! GGTCGCGGAAGGATTTTTGG+GGG + Chr4:86825582-86825601 MsG0480023555.01.T01:CDS 55.0%
!!! CTTTTGGGGTTGCGGTGAGA+TGG - Chr4:86827332-86827351 None:intergenic 55.0%
ATGGCAGCACAACCGCTTCC+TGG - Chr4:86827313-86827332 None:intergenic 60.0%
TGAAACGACACGGTCGCGGA+AGG + Chr4:86825571-86825590 MsG0480023555.01.T01:CDS 60.0%
! CGCCGTGATGGTTTTTGCGG+TGG + Chr4:86824535-86824554 MsG0480023555.01.T01:intron 60.0%
! GCCCGCCGTGATGGTTTTTG+CGG + Chr4:86824532-86824551 MsG0480023555.01.T01:intron 60.0%
CATGTAGCAGCCCGCCGTGA+TGG + Chr4:86824523-86824542 MsG0480023555.01.T01:intron 65.0%
Chromosome Type Strat End Strand Name
Chr4 gene 86823881 86829874 86823881 ID=MsG0480023555.01;Name=MsG0480023555.01
Chr4 mRNA 86823881 86829874 86823881 ID=MsG0480023555.01.T01;Parent=MsG0480023555.01;Name=MsG0480023555.01.T01;_AED=0.70;_eAED=1.00;_QI=0|0|0|0.57|1|1|7|0|268
Chr4 exon 86823881 86823967 86823881 ID=MsG0480023555.01.T01:exon:6070;Parent=MsG0480023555.01.T01
Chr4 exon 86824132 86824256 86824132 ID=MsG0480023555.01.T01:exon:6071;Parent=MsG0480023555.01.T01
Chr4 exon 86825306 86825438 86825306 ID=MsG0480023555.01.T01:exon:6072;Parent=MsG0480023555.01.T01
Chr4 exon 86825540 86825639 86825540 ID=MsG0480023555.01.T01:exon:6073;Parent=MsG0480023555.01.T01
Chr4 exon 86826290 86826388 86826290 ID=MsG0480023555.01.T01:exon:6074;Parent=MsG0480023555.01.T01
Chr4 exon 86828175 86828383 86828175 ID=MsG0480023555.01.T01:exon:6075;Parent=MsG0480023555.01.T01
Chr4 exon 86829821 86829874 86829821 ID=MsG0480023555.01.T01:exon:6076;Parent=MsG0480023555.01.T01
Chr4 CDS 86823881 86823967 86823881 ID=MsG0480023555.01.T01:cds;Parent=MsG0480023555.01.T01
Chr4 CDS 86824132 86824256 86824132 ID=MsG0480023555.01.T01:cds;Parent=MsG0480023555.01.T01
Chr4 CDS 86825306 86825438 86825306 ID=MsG0480023555.01.T01:cds;Parent=MsG0480023555.01.T01
Chr4 CDS 86825540 86825639 86825540 ID=MsG0480023555.01.T01:cds;Parent=MsG0480023555.01.T01
Chr4 CDS 86826290 86826388 86826290 ID=MsG0480023555.01.T01:cds;Parent=MsG0480023555.01.T01
Chr4 CDS 86828175 86828383 86828175 ID=MsG0480023555.01.T01:cds;Parent=MsG0480023555.01.T01
Chr4 CDS 86829821 86829874 86829821 ID=MsG0480023555.01.T01:cds;Parent=MsG0480023555.01.T01
Gene Sequence

>MsG0480023555.01.T01

ATGCATAATCTATTAAGAGATCAATCGGAAGAGGAAGAAGAACTCGAATCCGAATATGAATACGAATCCAATCCTCGACTCAATTCGGATGAAGGAGAAAGAAGGGTAGGGCAAGAAGGTGAAGGACAAGGAGTGCTTGAAGAAGAAGTAGAGAGTGAAGGTGAGAGGGAGGTTGATGTCGCACAAACTTTCTCATCTCTTTTTTCTTCTCTAAACAGGGGTATCATCGCCGAGACTCCGAATCAAGCCGAACGTATCATCGCCGACATCCGAATCAGCCTCTTCAAGTTTTCGTCAAAGAGAATGCTTCCATGCAACATCATTTTTAGGACCTTCGATCCCTCGGAAAGGAGCTTGAAGAAGCTAGAATTCTTAGTGAAACGACACGGTCGCGGAAGGATTTTTGGGGGAAATTGGAATTCGGCGAAATTGGAATTATTTGAGTGTGACTGTGGTAGCGAAGGTATACTAGGTGATGCAAGAGAGAAGATTGTTGATTCTGTTGGGGATTTAAAGCTTGATGCTTTGGTTATGGGTAGCAGAGGGATTCCGTGGACTGAGGAAGAGCACAAGATGTTTTTGGTTGGATTGGAGAAAGTGGGAAAAGGTGATTGGAGAGGAATCTCAAGGAACTATGTGAAAATAAGAACGCCTACGCATGTTGCAAGTCATGCTCAGAAGTACTTTCTCCGCCGAAGTAATCTCAATCGCCGTCGCCGTAGATCCAGTCTCTTTGATATCACCATCGACACGGTATCTGCAATTCCAGTGGAGGCAGAACAGGTCAAGAATCAAGATAGGCCTTGA
Protein sequence

>MsG0480023555.01.T01

MHNLLRDQSEEEEELESEYEYESNPRLNSDEGERRVGQEGEGQGVLEEEVESEGEREVDVAQTFSSLFSSLNRGIIAETPNQAERIIADIRISLFKFSSKRMLPCNIIFRTFDPSERSLKKLEFLVKRHGRGRIFGGNWNSAKLELFECDCGSEGILGDAREKIVDSVGDLKLDALVMGSRGIPWTEEEHKMFLVGLEKVGKGDWRGISRNYVKIRTPTHVASHAQKYFLRRSNLNRRRRRSSLFDITIDTVSAIPVEAEQVKNQDRP*