AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0480023655.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480023655.01.T01 MTR_8g098425 63.745 251 40 5 26 226 360 609 7.51e-87 283
MsG0480023655.01.T01 MTR_8g098425 77.660 188 40 2 230 416 704 890 7.10e-83 272
MsG0480023655.01.T01 MTR_1g100250 50.388 258 79 5 18 226 355 612 1.84e-66 228
MsG0480023655.01.T01 MTR_3g096230 42.174 230 67 5 65 239 235 453 2.10e-46 167
MsG0480023655.01.T01 MTR_8g093730 42.609 230 66 5 65 239 290 508 4.14e-46 169
MsG0480023655.01.T01 MTR_3g096230 42.174 230 67 5 65 239 235 453 5.64e-46 168
MsG0480023655.01.T01 MTR_5g017890 35.985 264 95 6 32 233 336 587 1.16e-35 139
MsG0480023655.01.T01 MTR_3g101210 34.328 268 102 7 28 233 267 522 4.76e-34 134
MsG0480023655.01.T01 MTR_3g101210 34.328 268 102 7 28 233 267 522 5.55e-34 134
MsG0480023655.01.T01 MTR_4g094415 34.008 247 99 8 39 229 128 366 5.90e-29 117
MsG0480023655.01.T01 MTR_4g094415 33.865 251 102 8 39 233 128 370 1.35e-28 117
MsG0480023655.01.T01 MTR_5g059880 34.855 241 90 8 60 242 179 410 1.14e-27 114
MsG0480023655.01.T01 MTR_5g059940 35.780 218 76 7 67 229 119 327 1.53e-27 113
MsG0480023655.01.T01 MTR_5g060350 35.780 218 76 7 67 229 315 523 2.46e-27 114
MsG0480023655.01.T01 MTR_7g113490 34.348 230 89 6 73 244 67 292 9.83e-27 113
MsG0480023655.01.T01 MTR_1g105290 32.456 228 94 5 73 243 54 278 5.81e-26 110
MsG0480023655.01.T01 MTR_1g105290 32.456 228 94 5 73 243 54 278 7.45e-26 110
MsG0480023655.01.T01 MTR_1g105290 32.314 229 95 5 73 244 54 279 8.27e-26 109
MsG0480023655.01.T01 MTR_5g059910 33.028 218 82 6 67 229 125 333 1.98e-23 101
MsG0480023655.01.T01 MTR_3g073250 34.426 244 91 8 50 233 255 489 2.27e-21 96.7
MsG0480023655.01.T01 MTR_3g073250 34.836 244 90 8 50 233 242 476 2.40e-21 96.7
MsG0480023655.01.T01 MTR_4g075410 28.372 215 88 7 72 229 18 223 7.08e-17 83.6
MsG0480023655.01.T01 MTR_4g075410 28.372 215 88 7 72 229 18 223 7.50e-17 83.6
MsG0480023655.01.T01 MTR_2g005290 28.448 232 98 8 71 237 7 235 1.03e-16 81.6
MsG0480023655.01.T01 MTR_2g078740 29.245 212 88 9 71 228 12 215 2.90e-16 81.3
MsG0480023655.01.T01 MTR_2g078740 29.245 212 88 9 71 228 12 215 2.98e-16 81.3
MsG0480023655.01.T01 MTR_2g078740 29.245 212 88 9 71 228 12 215 3.14e-16 81.3
MsG0480023655.01.T01 MTR_4g074875 27.442 215 90 7 72 229 18 223 8.43e-16 80.5
MsG0480023655.01.T01 MTR_4g074875 27.442 215 90 7 72 229 18 223 9.02e-16 80.1
MsG0480023655.01.T01 MTR_0685s0020 41.584 101 46 4 148 242 116 209 4.18e-14 72.4
MsG0480023655.01.T01 MTR_2g016280 28.947 190 111 7 54 225 11 194 4.25e-14 74.3
MsG0480023655.01.T01 MTR_2g100030 35.780 109 40 4 154 245 151 246 3.64e-11 65.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480023655.01.T01 AT1G63700 45.490 255 90 6 21 226 347 601 4.45e-59 207
MsG0480023655.01.T01 AT1G63700 45.490 255 90 6 21 226 347 601 4.45e-59 207
MsG0480023655.01.T01 AT1G53570 45.205 219 57 5 68 229 206 418 2.18e-46 167
MsG0480023655.01.T01 AT1G53570 45.205 219 57 5 68 229 206 418 2.44e-46 167
MsG0480023655.01.T01 AT1G53570 45.205 219 57 5 68 229 206 418 5.34e-46 167
MsG0480023655.01.T01 AT1G53570 45.205 219 57 5 68 229 206 418 6.14e-46 167
MsG0480023655.01.T01 AT1G53570 45.205 219 57 5 68 229 206 418 6.26e-46 167
MsG0480023655.01.T01 AT1G53570 45.205 219 57 5 68 229 206 418 6.26e-46 167
MsG0480023655.01.T01 AT1G53570 45.455 187 77 5 68 229 206 392 6.58e-40 150
MsG0480023655.01.T01 AT5G66850 39.111 225 69 5 71 233 343 561 3.37e-37 144
MsG0480023655.01.T01 AT5G66850 39.111 225 69 5 71 233 343 561 3.60e-37 144
MsG0480023655.01.T01 AT1G54960 32.028 281 122 8 24 244 20 291 2.24e-27 115
MsG0480023655.01.T01 AT1G54960 32.028 281 122 8 24 244 20 291 2.24e-27 115
MsG0480023655.01.T01 AT1G09000 31.915 282 125 9 23 244 18 292 1.39e-24 106
MsG0480023655.01.T01 AT3G06030 33.184 223 89 5 69 234 63 282 1.46e-24 106
MsG0480023655.01.T01 AT4G08500 33.333 249 101 9 41 233 301 540 1.47e-24 106
MsG0480023655.01.T01 AT1G09000 31.915 282 125 9 23 244 18 292 1.47e-24 106
MsG0480023655.01.T01 AT4G08480 31.727 249 105 6 41 233 469 708 5.57e-24 105
MsG0480023655.01.T01 AT4G12020 31.890 254 97 8 36 229 1581 1818 1.33e-23 104
MsG0480023655.01.T01 AT4G12020 31.890 254 97 8 36 229 1589 1826 1.38e-23 104
MsG0480023655.01.T01 AT4G12020 31.890 254 97 8 36 229 1514 1751 1.42e-23 104
MsG0480023655.01.T01 AT4G08470 33.898 236 86 8 74 247 303 530 4.97e-23 101
MsG0480023655.01.T01 AT4G08470 33.333 240 90 8 70 247 217 448 2.18e-22 99.4
MsG0480023655.01.T01 AT4G12020 29.032 248 96 7 36 229 1581 1802 7.06e-19 90.1
MsG0480023655.01.T01 AT4G12020 29.032 248 96 7 36 229 1589 1810 7.60e-19 89.7
MsG0480023655.01.T01 AT3G07980 27.907 215 89 7 72 229 18 223 8.18e-17 83.6
MsG0480023655.01.T01 AT3G07980 27.907 215 89 7 72 229 18 223 8.75e-17 83.6
MsG0480023655.01.T01 AT3G15220 28.095 210 93 7 71 228 12 215 1.53e-16 82.4
MsG0480023655.01.T01 AT3G13530 28.372 215 88 7 72 229 18 223 2.08e-16 82.4
MsG0480023655.01.T01 AT1G53165 27.830 212 95 7 69 228 10 215 2.47e-16 81.6
MsG0480023655.01.T01 AT1G53165 27.830 212 95 7 69 228 10 215 2.62e-16 81.6
MsG0480023655.01.T01 AT1G53165 27.830 212 95 7 69 228 10 215 3.09e-16 81.3
MsG0480023655.01.T01 AT4G12020 30.317 221 82 7 36 200 1589 1793 5.77e-15 77.8
MsG0480023655.01.T01 AT4G12020 30.317 221 82 7 36 200 1589 1793 5.77e-15 77.8
MsG0480023655.01.T01 AT4G12020 30.317 221 82 7 36 200 1581 1785 5.87e-15 77.8
MsG0480023655.01.T01 AT1G07150 29.167 216 87 6 68 225 3 210 1.47e-13 72.8
MsG0480023655.01.T01 AT2G30040 30.233 215 87 6 66 225 9 215 1.55e-13 72.4
MsG0480023655.01.T01 AT4G12020 39.252 107 63 2 36 142 1581 1685 1.86e-12 70.1
MsG0480023655.01.T01 AT4G12020 39.252 107 63 2 36 142 1581 1685 1.86e-12 70.1
MsG0480023655.01.T01 AT1G07150 28.571 210 84 6 74 225 23 224 4.33e-12 68.2

Find 125 sgRNAs with CRISPR-Local

Find 267 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAAATAAAACTAGCAGATTT+TGG 0.103144 4:-88133898 MsG0480023655.01.T01:CDS
CCTCAACGGCCCGCCTATTT+TGG 0.136090 4:+88132124 None:intergenic
GCGCACCATTCCCGTGATTT+AGG 0.137940 4:+88134661 None:intergenic
GGTTGCTTTGTTTGATGATA+TGG 0.177463 4:+88132306 None:intergenic
TGAAAACCAGTTGGGACTTT+TGG 0.215999 4:+88132254 None:intergenic
GCTGAGGCACCTCCAGCTTT+TGG 0.218658 4:+88135249 None:intergenic
CCAAACATAGTCCAGTATTA+TGG 0.257211 4:-88134361 MsG0480023655.01.T01:CDS
TGCTGTTGACATATGGAGTC+TGG 0.280097 4:-88133552 MsG0480023655.01.T01:CDS
CGCACCATTCCCGTGATTTA+GGG 0.289626 4:+88134662 None:intergenic
ATGCTCTTGCAAACCAAAAT+AGG 0.290783 4:-88132137 MsG0480023655.01.T01:CDS
AAATGGAGGCACTGCTTATC+AGG 0.310857 4:-88132228 MsG0480023655.01.T01:CDS
CTCTGAAACTGACCCTGCTT+TGG 0.322942 4:+88132200 None:intergenic
TTGCTTGGAAGGGGAACATT+TGG 0.327186 4:-88135032 MsG0480023655.01.T01:CDS
GAGTCTGGGTTGCACTGTTT+TGG 0.327430 4:-88133537 MsG0480023655.01.T01:CDS
CTTCTAGGCTGCGGAGTAGA+TGG 0.335874 4:+88132339 None:intergenic
CTGACATCTGGACGTCTTGT+AGG 0.356405 4:+88135219 None:intergenic
CAGAGCTTCCTGTGGGATAT+AGG 0.357634 4:+88132285 None:intergenic
CTTGAATTCGTTGATCTAGA+AGG 0.359752 4:+88132411 None:intergenic
TCATGTCCCGTTTCTCCATC+TGG 0.361433 4:-88132447 MsG0480023655.01.T01:CDS
CCAGGTTCACGCTGGACAAA+AGG 0.368035 4:-88135059 MsG0480023655.01.T01:CDS
GTTGTTTCGCATCTGACATC+TGG 0.373287 4:+88135207 None:intergenic
CCATAATACTGGACTATGTT+TGG 0.379172 4:+88134361 None:intergenic
ACATTTGGACATGTTTATCT+TGG 0.393073 4:-88135017 MsG0480023655.01.T01:CDS
CTATATCCCACAGGAAGCTC+TGG 0.397276 4:-88132284 MsG0480023655.01.T01:CDS
TTACGATGTATAGGTGCATT+TGG 0.398056 4:+88132018 None:intergenic
ATGCGAAACAACAAAGTTAT+CGG 0.400727 4:-88135196 MsG0480023655.01.T01:CDS
TCGTAATGAGAAGGCATGTT+TGG 0.414400 4:-88132085 MsG0480023655.01.T01:CDS
CATCAAAGGTGCAAACATAT+TGG 0.414492 4:-88133934 MsG0480023655.01.T01:CDS
GTTGCTTTGTTTGATGATAT+GGG 0.417019 4:+88132307 None:intergenic
GTAATCTTGCTGTTGACATA+TGG 0.423527 4:-88133559 MsG0480023655.01.T01:CDS
CCGTCTCAGACCCATAATAC+TGG 0.425246 4:+88134350 None:intergenic
ATGTTTATCTTGGTTTCAGC+AGG 0.426419 4:-88135007 MsG0480023655.01.T01:intron
GCAGAATAAGTCGGAGAAAA+CGG 0.429959 4:+88135137 None:intergenic
TCGGAAGCAGCTGGTATCTC+TGG 0.432223 4:-88132788 MsG0480023655.01.T01:CDS
CAAAAGGGCATTTGCTTGGA+AGG 0.433442 4:-88135043 MsG0480023655.01.T01:CDS
CAAACATAGTCCAGTATTAT+GGG 0.435430 4:-88134360 MsG0480023655.01.T01:CDS
TCCGGTCTTCATACTGCATC+TGG 0.440520 4:-88132363 MsG0480023655.01.T01:CDS
CCAAAATAGGCGGGCCGTTG+AGG 0.443401 4:-88132124 MsG0480023655.01.T01:CDS
ACCTCCATGGGCCAGTATGA+AGG 0.448502 4:-88133498 MsG0480023655.01.T01:CDS
AATTCACTCACCCTTCATAC+TGG 0.454713 4:+88133487 None:intergenic
AGCCCTCTGCATCCAAAAGC+TGG 0.456737 4:-88135261 MsG0480023655.01.T01:CDS
CCAGTAGACTTACGATGTAT+AGG 0.466226 4:+88132009 None:intergenic
GCTTGTAGCATTATCTGATC+TGG 0.470414 4:+88135082 None:intergenic
AGCCCACCAGATGGAGAAAC+GGG 0.471456 4:+88132441 None:intergenic
TCTGATCTGGCAGGACTTCG+AGG 0.472242 4:+88135095 None:intergenic
GGGAATGGTGCGCAGCAACT+TGG 0.479084 4:-88134651 MsG0480023655.01.T01:CDS
TCTCATTACGAAATTCTCTT+CGG 0.481662 4:+88132097 None:intergenic
TACAATCCAAAAGTCCCAAC+TGG 0.485980 4:-88132260 MsG0480023655.01.T01:CDS
ATTTAGGGTCATCTGAAAGA+AGG 0.493214 4:+88134677 None:intergenic
TCAGATAATGCTACAAGCCC+AGG 0.495865 4:-88135077 MsG0480023655.01.T01:CDS
CAAAATAGGCGGGCCGTTGA+GGG 0.496433 4:-88132123 MsG0480023655.01.T01:CDS
TTCTAGGCTGCGGAGTAGAT+GGG 0.498987 4:+88132340 None:intergenic
TTATCAGGAGGGTCCAAAGC+AGG 0.500239 4:-88132213 MsG0480023655.01.T01:CDS
TGGACAAAAGGGCATTTGCT+TGG 0.501000 4:-88135047 MsG0480023655.01.T01:CDS
AAACATATTGGTGACCCTAA+TGG 0.502688 4:-88133922 MsG0480023655.01.T01:CDS
GCTGTTGACATATGGAGTCT+GGG 0.506467 4:-88133551 MsG0480023655.01.T01:CDS
TGTGATTTATGTAGAGAAAG+TGG 0.509030 4:-88134727 MsG0480023655.01.T01:intron
CCTATACATCGTAAGTCTAC+TGG 0.509225 4:-88132009 MsG0480023655.01.T01:CDS
GCAGTATGAAGACCGGATGT+TGG 0.510019 4:+88132369 None:intergenic
ACCTCAGGTGCCATCCAGTA+AGG 0.511153 4:+88133687 None:intergenic
ATATCTCCCTCTCCAACATC+CGG 0.514926 4:-88132381 MsG0480023655.01.T01:CDS
CAGGTTCACGCTGGACAAAA+GGG 0.515392 4:-88135058 MsG0480023655.01.T01:CDS
TGTTTAGACTCGGAAGCAGC+TGG 0.518230 4:-88132797 MsG0480023655.01.T01:intron
TTCAGATGACCCTAAATCAC+GGG 0.518491 4:-88134671 MsG0480023655.01.T01:CDS
ATGAAGACCGGATGTTGGAG+AGG 0.520556 4:+88132374 None:intergenic
TAGCCCACCAGATGGAGAAA+CGG 0.521680 4:+88132440 None:intergenic
CATTTGACTGAAAACCAGTT+GGG 0.524367 4:+88132246 None:intergenic
CCAGCTCTGAAGCTTCTAGT+TGG 0.531545 4:+88132758 None:intergenic
TGGCGAGATGTGTGCAATGA+AGG 0.531934 4:-88134707 MsG0480023655.01.T01:CDS
CTGATCTGGCAGGACTTCGA+GGG 0.538106 4:+88135096 None:intergenic
CCTCCATGGGCCAGTATGAA+GGG 0.540108 4:-88133497 MsG0480023655.01.T01:intron
ATATAGGTTATAAAATTCAA+AGG 0.540282 4:-88133584 MsG0480023655.01.T01:intron
GCTCTGAAGCTTCTAGTTGG+AGG 0.541681 4:+88132761 None:intergenic
TCAGAGCTGGTTATGAATCA+AGG 0.541719 4:-88132745 MsG0480023655.01.T01:intron
AAAGGGCATTTGCTTGGAAG+GGG 0.550617 4:-88135041 MsG0480023655.01.T01:CDS
CAGAGAAATATCAAGCTAGA+CGG 0.552404 4:-88132182 MsG0480023655.01.T01:CDS
GCAGGACTTCGAGGGGCTGA+AGG 0.554216 4:+88135104 None:intergenic
CCATTTGACTGAAAACCAGT+TGG 0.554401 4:+88132245 None:intergenic
CTCTGAAGCTTCTAGTTGGA+GGG 0.555482 4:+88132762 None:intergenic
TAAAGGAAGTCCTTACTGGA+TGG 0.558933 4:-88133697 MsG0480023655.01.T01:CDS
AGAGAAATATCAAGCTAGAC+GGG 0.560365 4:-88132181 MsG0480023655.01.T01:CDS
GTCCCGTTTCTCCATCTGGT+GGG 0.561601 4:-88132443 MsG0480023655.01.T01:CDS
TGTCCCGTTTCTCCATCTGG+TGG 0.564252 4:-88132444 MsG0480023655.01.T01:CDS
GCCAGATGCAGTATGAAGAC+CGG 0.565370 4:+88132362 None:intergenic
CTCTTGCAAACCAAAATAGG+CGG 0.569424 4:-88132134 MsG0480023655.01.T01:CDS
TTCTCTTCGGACTCCCTCAA+CGG 0.570632 4:+88132110 None:intergenic
TGGCAACAACAAAACCTCCA+TGG 0.571200 4:-88133511 MsG0480023655.01.T01:CDS
AAAAGGGCATTTGCTTGGAA+GGG 0.574412 4:-88135042 MsG0480023655.01.T01:CDS
TCCTTACTGGATGGCACCTG+AGG 0.577625 4:-88133688 MsG0480023655.01.T01:intron
TTTAGGGTCATCTGAAAGAA+GGG 0.578318 4:+88134678 None:intergenic
AAGAGAATTTCGTAATGAGA+AGG 0.579943 4:-88132094 MsG0480023655.01.T01:CDS
GGCAACAACAAAACCTCCAT+GGG 0.581651 4:-88133510 MsG0480023655.01.T01:CDS
TCTACTCCGCAGCCTAGAAG+TGG 0.584973 4:-88132336 MsG0480023655.01.T01:CDS
CGTCTCAACAACAGTTGGTG+AGG 0.586901 4:-88132053 MsG0480023655.01.T01:CDS
GTAGCATTATCTGATCTGGC+AGG 0.591519 4:+88135086 None:intergenic
TCACCCTTCATACTGGCCCA+TGG 0.596156 4:+88133494 None:intergenic
CCAACTAGAAGCTTCAGAGC+TGG 0.597806 4:-88132758 MsG0480023655.01.T01:CDS
TCTTGCAAACCAAAATAGGC+GGG 0.599817 4:-88132133 MsG0480023655.01.T01:CDS
TTTCAGATGACCCTAAATCA+CGG 0.600404 4:-88134672 MsG0480023655.01.T01:CDS
GGCAAACGTAGCCCACCAGA+TGG 0.602808 4:+88132432 None:intergenic
ATTGTACCCAGAGCTTCCTG+TGG 0.605495 4:+88132277 None:intergenic
GTTGAAGACGCAGAATAAGT+CGG 0.607488 4:+88135128 None:intergenic
TATCAGGAGGGTCCAAAGCA+GGG 0.610807 4:-88132212 MsG0480023655.01.T01:CDS
ATGACCCTAAATCACGGGAA+TGG 0.611960 4:-88134666 MsG0480023655.01.T01:CDS
TGAAGACCGGATGTTGGAGA+GGG 0.615986 4:+88132375 None:intergenic
CAAAGCAACCTATATCCCAC+AGG 0.627833 4:-88132293 MsG0480023655.01.T01:CDS
TGGAGGCACTGCTTATCAGG+AGG 0.627868 4:-88132225 MsG0480023655.01.T01:CDS
TATATCCCACAGGAAGCTCT+GGG 0.628128 4:-88132283 MsG0480023655.01.T01:CDS
CTAGATCAACGAATTCAAGC+GGG 0.630850 4:-88132407 MsG0480023655.01.T01:CDS
CTACAAGCCCAGGTTCACGC+TGG 0.631749 4:-88135067 MsG0480023655.01.T01:CDS
ATGCATTGCTAAGTCAGTTG+CGG 0.635489 4:-88134387 MsG0480023655.01.T01:CDS
GGAGGCACTGCTTATCAGGA+GGG 0.635744 4:-88132224 MsG0480023655.01.T01:CDS
TCTTGTAGGCAACTCTGCTG+AGG 0.643600 4:+88135233 None:intergenic
CCCTTCATACTGGCCCATGG+AGG 0.645445 4:+88133497 None:intergenic
CTACTCCGCAGCCTAGAAGT+GGG 0.647037 4:-88132335 MsG0480023655.01.T01:CDS
TCTAGATCAACGAATTCAAG+CGG 0.647182 4:-88132408 MsG0480023655.01.T01:CDS
GTCTCAACAACAGTTGGTGA+GGG 0.647218 4:-88132052 MsG0480023655.01.T01:CDS
CCAGTATTATGGGTCTGAGA+CGG 0.663719 4:-88134350 MsG0480023655.01.T01:intron
TTGTACCCAGAGCTTCCTGT+GGG 0.664611 4:+88132278 None:intergenic
TGATCTGGCAGGACTTCGAG+GGG 0.666403 4:+88135097 None:intergenic
AGCCATCCATGCGATCAGCA+TGG 0.673562 4:+88131982 None:intergenic
CGAGATGTGTGCAATGAAGG+AGG 0.679197 4:-88134704 MsG0480023655.01.T01:CDS
AGTTGGTGAGGGATAATGTG+AGG 0.681739 4:-88132041 MsG0480023655.01.T01:CDS
CCTCTGCATCCAAAAGCTGG+AGG 0.692422 4:-88135258 MsG0480023655.01.T01:CDS
TTGTGCGTCTCAACAACAGT+TGG 0.715912 4:-88132058 MsG0480023655.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATAAATATAATAAATATAT+TGG - Chr4:88134327-88134346 MsG0480023655.01.T01:intron 0.0%
!! ATAATAAATATTAATGTGTC+TGG + Chr4:88132296-88132315 None:intergenic 15.0%
!! ATATAGGTTATAAAATTCAA+AGG - Chr4:88133678-88133697 MsG0480023655.01.T01:intron 15.0%
!! CTTTATAAATTATACCTAAT+AGG - Chr4:88133039-88133058 MsG0480023655.01.T01:intron 15.0%
!!! TAATATCTATTATGTTGTTT+AGG - Chr4:88134274-88134293 MsG0480023655.01.T01:intron 15.0%
!!! TCATTTCAAATTTTTCTTTT+AGG - Chr4:88134417-88134436 MsG0480023655.01.T01:intron 15.0%
!!! TTTTATAACCTATATAATTG+AGG + Chr4:88133673-88133692 None:intergenic 15.0%
!! ACAAATATATGAATCTTAGT+TGG - Chr4:88133859-88133878 MsG0480023655.01.T01:intron 20.0%
!! AGTTAAAAAAATGTGGATAA+AGG + Chr4:88132478-88132497 None:intergenic 20.0%
!! TATAAATTGCTTCAAGAATA+CGG - Chr4:88133112-88133131 MsG0480023655.01.T01:intron 20.0%
!!! AAATAAAACTAGCAGATTTT+GGG - Chr4:88133365-88133384 MsG0480023655.01.T01:intron 20.0%
!!! AAATTTTTCTTTTAGGCTAT+TGG - Chr4:88134424-88134443 MsG0480023655.01.T01:intron 20.0%
!!! AATTTGACCAATTTTCTATA+CGG + Chr4:88134677-88134696 None:intergenic 20.0%
!!! TTTTTCTCAAAGAAAAACAA+TGG + Chr4:88132778-88132797 None:intergenic 20.0%
! AACAAATTCATGTTTAGACT+CGG - Chr4:88134455-88134474 MsG0480023655.01.T01:intron 25.0%
! AACAGATAAAGGATTAAACA+TGG + Chr4:88132404-88132423 None:intergenic 25.0%
! AAGGATGATTGAATAAATGA+AGG + Chr4:88134218-88134237 None:intergenic 25.0%
! AAGTCAAACTTAAAAGTTGA+AGG + Chr4:88132506-88132525 None:intergenic 25.0%
! AATGAAACAGATACACTTTA+TGG + Chr4:88134356-88134375 None:intergenic 25.0%
! AATTAGGTGAAATTGCAATT+CGG - Chr4:88133137-88133156 MsG0480023655.01.T01:intron 25.0%
! ACAGATAAAGGATTAAACAT+GGG + Chr4:88132403-88132422 None:intergenic 25.0%
! AGTCAAACTTAAAAGTTGAA+GGG + Chr4:88132505-88132524 None:intergenic 25.0%
! ATAATCATGCACACAAAAAT+GGG + Chr4:88132341-88132360 None:intergenic 25.0%
! ATTAGGAAAAGTGATGATTA+AGG - Chr4:88134635-88134654 MsG0480023655.01.T01:intron 25.0%
! ATTGCATTATAATAGCAGAT+GGG + Chr4:88134156-88134175 None:intergenic 25.0%
! CAAAGAAAAACAATGGAAAT+TGG + Chr4:88132771-88132790 None:intergenic 25.0%
! GGAAAGTTCTTTAATATGAA+AGG - Chr4:88134731-88134750 MsG0480023655.01.T01:intron 25.0%
! GTATAGAAAATTGGTCAAAT+TGG - Chr4:88134676-88134695 MsG0480023655.01.T01:CDS 25.0%
! TAAGCTTCTACTTTGTAATT+AGG - Chr4:88134618-88134637 MsG0480023655.01.T01:intron 25.0%
! TGACAAACTTTACATATACT+TGG - Chr4:88133066-88133085 MsG0480023655.01.T01:intron 25.0%
! TGTAAAACAATCTGTTTGTT+TGG - Chr4:88133292-88133311 MsG0480023655.01.T01:intron 25.0%
!! CAAATAAAACTAGCAGATTT+TGG - Chr4:88133364-88133383 MsG0480023655.01.T01:intron 25.0%
!!! CAAACAGATTGTTTTACAAA+TGG + Chr4:88133290-88133309 None:intergenic 25.0%
!!! CAAGATTTAGTCACTTTTAT+TGG + Chr4:88132104-88132123 None:intergenic 25.0%
!!! CTAGTTTTATTTGTCCATTA+GGG + Chr4:88133357-88133376 None:intergenic 25.0%
!!! TTCAACTTTTAAGTTTGACT+TGG - Chr4:88132505-88132524 MsG0480023655.01.T01:intron 25.0%
AAGAGAATTTCGTAATGAGA+AGG - Chr4:88135168-88135187 MsG0480023655.01.T01:CDS 30.0%
AAGTTTGTCATCTACCTATT+AGG + Chr4:88133056-88133075 None:intergenic 30.0%
ACATTTGGACATGTTTATCT+TGG - Chr4:88132245-88132264 MsG0480023655.01.T01:CDS 30.0%
AGAAAAACAATGGAAATTGG+AGG + Chr4:88132768-88132787 None:intergenic 30.0%
AGAGTACACATAACAGATAA+AGG + Chr4:88132415-88132434 None:intergenic 30.0%
AGTCACTTCCTCAATTATAT+AGG - Chr4:88133662-88133681 MsG0480023655.01.T01:intron 30.0%
ATGCGAAACAACAAAGTTAT+CGG - Chr4:88132066-88132085 MsG0480023655.01.T01:CDS 30.0%
CAAACATAGTCCAGTATTAT+GGG - Chr4:88132902-88132921 MsG0480023655.01.T01:intron 30.0%
CACATGAAAAAGAAATGCAA+TGG - Chr4:88134594-88134613 MsG0480023655.01.T01:intron 30.0%
CAGATCATTTATCAGAAGAA+GGG - Chr4:88134001-88134020 MsG0480023655.01.T01:intron 30.0%
CATAATCATGCACACAAAAA+TGG + Chr4:88132342-88132361 None:intergenic 30.0%
CATTGCATTATAATAGCAGA+TGG + Chr4:88134157-88134176 None:intergenic 30.0%
GTATAAGATGAAACCTCTTT+GGG - Chr4:88133429-88133448 MsG0480023655.01.T01:intron 30.0%
GTATCTGTTTCATTTGTGTT+TGG - Chr4:88134362-88134381 MsG0480023655.01.T01:CDS 30.0%
GTCAAACTTAAAAGTTGAAG+GGG + Chr4:88132504-88132523 None:intergenic 30.0%
TCAGTAATGCTCAGAAAAAA+AGG - Chr4:88134786-88134805 MsG0480023655.01.T01:intron 30.0%
TCTCATTACGAAATTCTCTT+CGG + Chr4:88135168-88135187 None:intergenic 30.0%
TGTAAACTAGACATGTGATT+TGG + Chr4:88132723-88132742 None:intergenic 30.0%
TGTATAAGATGAAACCTCTT+TGG - Chr4:88133428-88133447 MsG0480023655.01.T01:intron 30.0%
TGTGATTTATGTAGAGAAAG+TGG - Chr4:88132535-88132554 MsG0480023655.01.T01:intron 30.0%
TTATAATGCAATGAGATCTC+TGG - Chr4:88134164-88134183 MsG0480023655.01.T01:intron 30.0%
TTGCATTATAATAGCAGATG+GGG + Chr4:88134155-88134174 None:intergenic 30.0%
! CATTTTTGTGTGCATGATTA+TGG - Chr4:88132340-88132359 MsG0480023655.01.T01:CDS 30.0%
! GATAAATGATCTGGAATTGT+AGG + Chr4:88133994-88134013 None:intergenic 30.0%
! GGCTCTTTCATTTCTTTTAA+AGG - Chr4:88133548-88133567 MsG0480023655.01.T01:CDS 30.0%
! TTGCTGCTATGTTTAAGATT+GGG - Chr4:88133955-88133974 MsG0480023655.01.T01:intron 30.0%
! TTTTCTGAGCATTACTGAAA+AGG + Chr4:88134784-88134803 None:intergenic 30.0%
!! ATTAAGGCATTTTGATGTCA+TGG - Chr4:88134651-88134670 MsG0480023655.01.T01:CDS 30.0%
!! GTTGCTTTGTTTGATGATAT+GGG + Chr4:88134958-88134977 None:intergenic 30.0%
!! TTTTCTTTGAGAAAAACCCT+AGG - Chr4:88132782-88132801 MsG0480023655.01.T01:CDS 30.0%
!!! GATTTAGTCACTTTTATTGG+AGG + Chr4:88132101-88132120 None:intergenic 30.0%
!!! GCTAGTTTTATTTGTCCATT+AGG + Chr4:88133358-88133377 None:intergenic 30.0%
!!! TGTTTGTTTGGTTTTGATCA+GGG - Chr4:88133304-88133323 MsG0480023655.01.T01:intron 30.0%
!!! TTTGCAAGAGCATTATTTTC+AGG + Chr4:88135118-88135137 None:intergenic 30.0%
AAAATAATGCAGCTGTGCAA+AGG + Chr4:88134237-88134256 None:intergenic 35.0%
AAGTTATCCAAATCCCAAAG+AGG + Chr4:88133445-88133464 None:intergenic 35.0%
AGAGAAATATCAAGCTAGAC+GGG - Chr4:88135081-88135100 MsG0480023655.01.T01:CDS 35.0%
AGCACATTCAATTTCGAATC+AGG + Chr4:88132441-88132460 None:intergenic 35.0%
AGTCACTGACAAGATTTATG+TGG + Chr4:88133618-88133637 None:intergenic 35.0%
ATATGAAAGGAGATGTACTC+AGG - Chr4:88134744-88134763 MsG0480023655.01.T01:intron 35.0%
ATGCTCTTGCAAACCAAAAT+AGG - Chr4:88135125-88135144 MsG0480023655.01.T01:CDS 35.0%
ATGTTTATCTTGGTTTCAGC+AGG - Chr4:88132255-88132274 MsG0480023655.01.T01:CDS 35.0%
CAATTTATAGATTGACCCAC+CGG + Chr4:88133101-88133120 None:intergenic 35.0%
CAGAGAAATATCAAGCTAGA+CGG - Chr4:88135080-88135099 MsG0480023655.01.T01:CDS 35.0%
CAGTTATCTGCAAAATATCC+CGG + Chr4:88133524-88133543 None:intergenic 35.0%
CATTTGACTGAAAACCAGTT+GGG + Chr4:88135019-88135038 None:intergenic 35.0%
CCAAACATAGTCCAGTATTA+TGG - Chr4:88132901-88132920 MsG0480023655.01.T01:intron 35.0%
CCAGATCATTTATCAGAAGA+AGG - Chr4:88134000-88134019 MsG0480023655.01.T01:intron 35.0%
CCATAATACTGGACTATGTT+TGG + Chr4:88132904-88132923 None:intergenic 35.0%
CCTTCTTCTGATAAATGATC+TGG + Chr4:88134003-88134022 None:intergenic 35.0%
CTTCAAGAATACGGACAATT+AGG - Chr4:88133121-88133140 MsG0480023655.01.T01:intron 35.0%
CTTGAATTCGTTGATCTAGA+AGG + Chr4:88134854-88134873 None:intergenic 35.0%
GAAGGAATTGAATACACAAG+TGG + Chr4:88134200-88134219 None:intergenic 35.0%
GACACCATCTCATAATAGTT+AGG + Chr4:88133488-88133507 None:intergenic 35.0%
GCACATTCAATTTCGAATCA+GGG + Chr4:88132440-88132459 None:intergenic 35.0%
GGGGCTTAGTTAAAAAAATG+TGG + Chr4:88132485-88132504 None:intergenic 35.0%
GGTGTCTAATATTGCTTATC+CGG - Chr4:88133502-88133521 MsG0480023655.01.T01:CDS 35.0%
GTGTCTAATATTGCTTATCC+GGG - Chr4:88133503-88133522 MsG0480023655.01.T01:CDS 35.0%
TCTAGATCAACGAATTCAAG+CGG - Chr4:88134854-88134873 MsG0480023655.01.T01:intron 35.0%
TCTGCCTAACTATTATGAGA+TGG - Chr4:88133481-88133500 MsG0480023655.01.T01:intron 35.0%
TGAAGAATCAGCATTCAGAA+TGG + Chr4:88134128-88134147 None:intergenic 35.0%
TTACGATGTATAGGTGCATT+TGG + Chr4:88135247-88135266 None:intergenic 35.0%
TTTCAGATGACCCTAAATCA+CGG - Chr4:88132590-88132609 MsG0480023655.01.T01:intron 35.0%
! AAACATATTGGTGACCCTAA+TGG - Chr4:88133340-88133359 MsG0480023655.01.T01:intron 35.0%
! AAGAAGGGAAAGATTTTGTC+AGG - Chr4:88134016-88134035 MsG0480023655.01.T01:intron 35.0%
! AGCGAAGCACTTTAAACAAA+TGG + Chr4:88134098-88134117 None:intergenic 35.0%
! ATTTAGGGTCATCTGAAAGA+AGG + Chr4:88132588-88132607 None:intergenic 35.0%
! ATTTGTTTAAAGTGCTTCGC+TGG - Chr4:88134097-88134116 MsG0480023655.01.T01:intron 35.0%
! CATCAAAGGTGCAAACATAT+TGG - Chr4:88133328-88133347 MsG0480023655.01.T01:intron 35.0%
! GAAAAACCCTAGGATAGTTT+TGG - Chr4:88132792-88132811 MsG0480023655.01.T01:CDS 35.0%
! GCGAAGCACTTTAAACAAAT+GGG + Chr4:88134097-88134116 None:intergenic 35.0%
! GGGATATTTTGCAGATAACT+GGG - Chr4:88133523-88133542 MsG0480023655.01.T01:CDS 35.0%
! GTTGCTGCTATGTTTAAGAT+TGG - Chr4:88133954-88133973 MsG0480023655.01.T01:intron 35.0%
! TTTAGGGTCATCTGAAAGAA+GGG + Chr4:88132587-88132606 None:intergenic 35.0%
!! AAAACTAGCAGATTTTGGGA+TGG - Chr4:88133369-88133388 MsG0480023655.01.T01:intron 35.0%
!! CTTTTAAAGGAAGTCCTTAC+TGG - Chr4:88133561-88133580 MsG0480023655.01.T01:CDS 35.0%
!! GGTAAATTTGTTGAGTTGTG+TGG - Chr4:88134295-88134314 MsG0480023655.01.T01:intron 35.0%
!! GGTTGCTTTGTTTGATGATA+TGG + Chr4:88134959-88134978 None:intergenic 35.0%
!! GTAATCTTGCTGTTGACATA+TGG - Chr4:88133703-88133722 MsG0480023655.01.T01:CDS 35.0%
!!! CTGTTTGTTTGGTTTTGATC+AGG - Chr4:88133303-88133322 MsG0480023655.01.T01:intron 35.0%
AAAGAAAAGCAAGGGTTGTG+GGG + Chr4:88132693-88132712 None:intergenic 40.0%
AATTCACTCACCCTTCATAC+TGG + Chr4:88133778-88133797 None:intergenic 40.0%
ACTCAGTCCAAAACTATCCT+AGG + Chr4:88132802-88132821 None:intergenic 40.0%
ATATACTTGGAGTACGTCTC+CGG - Chr4:88133079-88133098 MsG0480023655.01.T01:intron 40.0%
ATGCAAAGAACACTGTTCAC+AGG - Chr4:88133197-88133216 MsG0480023655.01.T01:intron 40.0%
ATGCATTGCTAAGTCAGTTG+CGG - Chr4:88132875-88132894 MsG0480023655.01.T01:intron 40.0%
CAAAGAAAAGCAAGGGTTGT+GGG + Chr4:88132694-88132713 None:intergenic 40.0%
CACACACTTAAGCATGAGAA+AGG - Chr4:88134570-88134589 MsG0480023655.01.T01:intron 40.0%
CCAGTAGACTTACGATGTAT+AGG + Chr4:88135256-88135275 None:intergenic 40.0%
CCATTTGACTGAAAACCAGT+TGG + Chr4:88135020-88135039 None:intergenic 40.0%
CCTATACATCGTAAGTCTAC+TGG - Chr4:88135253-88135272 MsG0480023655.01.T01:CDS 40.0%
CTAGATCAACGAATTCAAGC+GGG - Chr4:88134855-88134874 MsG0480023655.01.T01:intron 40.0%
CTCAGTCCAAAACTATCCTA+GGG + Chr4:88132801-88132820 None:intergenic 40.0%
CTCTTGCAAACCAAAATAGG+CGG - Chr4:88135128-88135147 MsG0480023655.01.T01:CDS 40.0%
CTTTCTCATGCTTAAGTGTG+TGG + Chr4:88134572-88134591 None:intergenic 40.0%
GACTTCCCAAAGAAAAGCAA+GGG + Chr4:88132701-88132720 None:intergenic 40.0%
GAGAGTGAAACAGTAGAAAC+AGG + Chr4:88133923-88133942 None:intergenic 40.0%
GCAGAAATCATACTTACCTC+AGG + Chr4:88133593-88133612 None:intergenic 40.0%
GCAGAATAAGTCGGAGAAAA+CGG + Chr4:88132128-88132147 None:intergenic 40.0%
GCTTGTAGCATTATCTGATC+TGG + Chr4:88132183-88132202 None:intergenic 40.0%
GTCATGGCCGTATAGAAAAT+TGG - Chr4:88134667-88134686 MsG0480023655.01.T01:CDS 40.0%
GTTGAAGACGCAGAATAAGT+CGG + Chr4:88132137-88132156 None:intergenic 40.0%
GTTTCACTCTCAATGCTTCA+AGG - Chr4:88133932-88133951 MsG0480023655.01.T01:CDS 40.0%
TAAAGGAAGTCCTTACTGGA+TGG - Chr4:88133565-88133584 MsG0480023655.01.T01:CDS 40.0%
TACAATCCAAAAGTCCCAAC+TGG - Chr4:88135002-88135021 MsG0480023655.01.T01:intron 40.0%
TCAGAGCTGGTTATGAATCA+AGG - Chr4:88134517-88134536 MsG0480023655.01.T01:intron 40.0%
TCTTGCAAACCAAAATAGGC+GGG - Chr4:88135129-88135148 MsG0480023655.01.T01:CDS 40.0%
TTCAGATGACCCTAAATCAC+GGG - Chr4:88132591-88132610 MsG0480023655.01.T01:intron 40.0%
TTGCAATTCGGAATTACACC+CGG - Chr4:88133149-88133168 MsG0480023655.01.T01:intron 40.0%
TTTACACCAGCAAGCTTACT+TGG + Chr4:88132637-88132656 None:intergenic 40.0%
! ATGTACGTGATGTCATTTGC+AGG - Chr4:88132850-88132869 MsG0480023655.01.T01:intron 40.0%
! CACAGCTGCATTATTTTCTG+AGG - Chr4:88134240-88134259 MsG0480023655.01.T01:intron 40.0%
! CGGGATATTTTGCAGATAAC+TGG - Chr4:88133522-88133541 MsG0480023655.01.T01:CDS 40.0%
! TATGGGATTTTCCCACTTCT+AGG + Chr4:88134941-88134960 None:intergenic 40.0%
! TATTTTGCAGATAACTGGGC+AGG - Chr4:88133527-88133546 MsG0480023655.01.T01:CDS 40.0%
! TCGTAATGAGAAGGCATGTT+TGG - Chr4:88135177-88135196 MsG0480023655.01.T01:CDS 40.0%
! TGAAAACCAGTTGGGACTTT+TGG + Chr4:88135011-88135030 None:intergenic 40.0%
!! AAAAGGGCATTTGCTTGGAA+GGG - Chr4:88132220-88132239 MsG0480023655.01.T01:CDS 40.0%
!! AGCTGCATTATTTTCTGAGG+TGG - Chr4:88134243-88134262 MsG0480023655.01.T01:intron 40.0%
!! CACAACCCTTGCTTTTCTTT+GGG - Chr4:88132693-88132712 MsG0480023655.01.T01:intron 40.0%
!! GATGAAACCTCTTTGGGATT+TGG - Chr4:88133435-88133454 MsG0480023655.01.T01:intron 40.0%
!! GTTTTGATCAGGGACATCAA+AGG - Chr4:88133314-88133333 MsG0480023655.01.T01:intron 40.0%
!! TAAGCTTGCTGGTGTAAACT+GGG - Chr4:88132639-88132658 MsG0480023655.01.T01:intron 40.0%
!! TTGTCAGGCTTTGTTGCAAA+GGG - Chr4:88134031-88134050 MsG0480023655.01.T01:intron 40.0%
!! TTTGTCAGGCTTTGTTGCAA+AGG - Chr4:88134030-88134049 MsG0480023655.01.T01:intron 40.0%
!!! ACTGGTTTTCAGTCAAATGG+AGG - Chr4:88135020-88135039 MsG0480023655.01.T01:CDS 40.0%
!!! CCAACTGGTTTTCAGTCAAA+TGG - Chr4:88135017-88135036 MsG0480023655.01.T01:CDS 40.0%
!!! GTCACTTTTATTGGAGGAAG+CGG + Chr4:88132095-88132114 None:intergenic 40.0%
ATATCTCCCTCTCCAACATC+CGG - Chr4:88134881-88134900 MsG0480023655.01.T01:intron 45.0%
ATGACCCTAAATCACGGGAA+TGG - Chr4:88132596-88132615 MsG0480023655.01.T01:intron 45.0%
CAAAGCAACCTATATCCCAC+AGG - Chr4:88134969-88134988 MsG0480023655.01.T01:intron 45.0%
CCAAAGAAAAGCAAGGGTTG+TGG + Chr4:88132695-88132714 None:intergenic 45.0%
CCAGTATTATGGGTCTGAGA+CGG - Chr4:88132912-88132931 MsG0480023655.01.T01:intron 45.0%
GCTGTTGACATATGGAGTCT+GGG - Chr4:88133711-88133730 MsG0480023655.01.T01:CDS 45.0%
GGACTTCCCAAAGAAAAGCA+AGG + Chr4:88132702-88132721 None:intergenic 45.0%
GGCAACAACAAAACCTCCAT+GGG - Chr4:88133752-88133771 MsG0480023655.01.T01:intron 45.0%
GTAGCATTATCTGATCTGGC+AGG + Chr4:88132179-88132198 None:intergenic 45.0%
GTTTCAGCAGGTCTGTTAAG+TGG - Chr4:88132267-88132286 MsG0480023655.01.T01:CDS 45.0%
TATATCCCACAGGAAGCTCT+GGG - Chr4:88134979-88134998 MsG0480023655.01.T01:intron 45.0%
TCAGATAATGCTACAAGCCC+AGG - Chr4:88132185-88132204 MsG0480023655.01.T01:CDS 45.0%
TGCTGTTGACATATGGAGTC+TGG - Chr4:88133710-88133729 MsG0480023655.01.T01:CDS 45.0%
TGGCAACAACAAAACCTCCA+TGG - Chr4:88133751-88133770 MsG0480023655.01.T01:intron 45.0%
TTGCTTGGAAGGGGAACATT+TGG - Chr4:88132230-88132249 MsG0480023655.01.T01:CDS 45.0%
TTGTGCGTCTCAACAACAGT+TGG - Chr4:88135204-88135223 MsG0480023655.01.T01:CDS 45.0%
TTTGTTGCAAAGGGATCCAC+TGG - Chr4:88134040-88134059 MsG0480023655.01.T01:intron 45.0%
! ATTTTCCCACTTCTAGGCTG+CGG + Chr4:88134935-88134954 None:intergenic 45.0%
! GTTGTTTCGCATCTGACATC+TGG + Chr4:88132058-88132077 None:intergenic 45.0%
!! AAAGGGCATTTGCTTGGAAG+GGG - Chr4:88132221-88132240 MsG0480023655.01.T01:CDS 45.0%
!! AAATGGAGGCACTGCTTATC+AGG - Chr4:88135034-88135053 MsG0480023655.01.T01:CDS 45.0%
!! AGTTGGTGAGGGATAATGTG+AGG - Chr4:88135221-88135240 MsG0480023655.01.T01:CDS 45.0%
!! CAAAAGGGCATTTGCTTGGA+AGG - Chr4:88132219-88132238 MsG0480023655.01.T01:CDS 45.0%
!! CCACAACCCTTGCTTTTCTT+TGG - Chr4:88132692-88132711 MsG0480023655.01.T01:intron 45.0%
!! CTCTGAAGCTTCTAGTTGGA+GGG + Chr4:88134503-88134522 None:intergenic 45.0%
!! GTAAGCTTGCTGGTGTAAAC+TGG - Chr4:88132638-88132657 MsG0480023655.01.T01:intron 45.0%
!! GTCTCAACAACAGTTGGTGA+GGG - Chr4:88135210-88135229 MsG0480023655.01.T01:CDS 45.0%
!! TGGACAAAAGGGCATTTGCT+TGG - Chr4:88132215-88132234 MsG0480023655.01.T01:CDS 45.0%
!!! TTTGTTTAAATAAAATTTTA+TGG - Chr4:88134710-88134729 MsG0480023655.01.T01:CDS 5.0%
ACTTGGCCAAGTAAGCTTGC+TGG - Chr4:88132628-88132647 MsG0480023655.01.T01:intron 50.0%
ATGAAGACCGGATGTTGGAG+AGG + Chr4:88134891-88134910 None:intergenic 50.0%
ATTACACCCGGCGATTCTTC+AGG - Chr4:88133161-88133180 MsG0480023655.01.T01:intron 50.0%
ATTGTACCCAGAGCTTCCTG+TGG + Chr4:88134988-88135007 None:intergenic 50.0%
CAGAGCTTCCTGTGGGATAT+AGG + Chr4:88134980-88134999 None:intergenic 50.0%
CAGGTTCACGCTGGACAAAA+GGG - Chr4:88132204-88132223 MsG0480023655.01.T01:CDS 50.0%
CCAACTAGAAGCTTCAGAGC+TGG - Chr4:88134504-88134523 MsG0480023655.01.T01:intron 50.0%
CCGTCTCAGACCCATAATAC+TGG + Chr4:88132915-88132934 None:intergenic 50.0%
CGAGATGTGTGCAATGAAGG+AGG - Chr4:88132558-88132577 MsG0480023655.01.T01:intron 50.0%
CGCACCATTCCCGTGATTTA+GGG + Chr4:88132603-88132622 None:intergenic 50.0%
CTATATCCCACAGGAAGCTC+TGG - Chr4:88134978-88134997 MsG0480023655.01.T01:intron 50.0%
CTGACATCTGGACGTCTTGT+AGG + Chr4:88132046-88132065 None:intergenic 50.0%
GCAGTATGAAGACCGGATGT+TGG + Chr4:88134896-88134915 None:intergenic 50.0%
GCCAGATGCAGTATGAAGAC+CGG + Chr4:88134903-88134922 None:intergenic 50.0%
TAGCCCACCAGATGGAGAAA+CGG + Chr4:88134825-88134844 None:intergenic 50.0%
TATCAGGAGGGTCCAAAGCA+GGG - Chr4:88135050-88135069 MsG0480023655.01.T01:CDS 50.0%
TCATGTCCCGTTTCTCCATC+TGG - Chr4:88134815-88134834 MsG0480023655.01.T01:intron 50.0%
TCCGGTCTTCATACTGCATC+TGG - Chr4:88134899-88134918 MsG0480023655.01.T01:intron 50.0%
TCTTGTAGGCAACTCTGCTG+AGG + Chr4:88132032-88132051 None:intergenic 50.0%
TGAAGACCGGATGTTGGAGA+GGG + Chr4:88134890-88134909 None:intergenic 50.0%
TGCAAGTCCTGAAGAATCGC+CGG + Chr4:88133171-88133190 None:intergenic 50.0%
TGGCGAGATGTGTGCAATGA+AGG - Chr4:88132555-88132574 MsG0480023655.01.T01:intron 50.0%
TGTAGAAGTTGACCAGCCGA+AGG + Chr4:88134071-88134090 None:intergenic 50.0%
TGTTTAGACTCGGAAGCAGC+TGG - Chr4:88134465-88134484 MsG0480023655.01.T01:intron 50.0%
TTATCAGGAGGGTCCAAAGC+AGG - Chr4:88135049-88135068 MsG0480023655.01.T01:CDS 50.0%
TTCTAGGCTGCGGAGTAGAT+GGG + Chr4:88134925-88134944 None:intergenic 50.0%
TTCTCTTCGGACTCCCTCAA+CGG + Chr4:88135155-88135174 None:intergenic 50.0%
TTGTACCCAGAGCTTCCTGT+GGG + Chr4:88134987-88135006 None:intergenic 50.0%
! CGTCTCAACAACAGTTGGTG+AGG - Chr4:88135209-88135228 MsG0480023655.01.T01:CDS 50.0%
! CTCCAGCTTTTGGATGCAGA+GGG + Chr4:88132006-88132025 None:intergenic 50.0%
! CTTTTGTCCAGCGTGAACCT+GGG + Chr4:88132205-88132224 None:intergenic 50.0%
! GAGTCTGGGTTGCACTGTTT+TGG - Chr4:88133725-88133744 MsG0480023655.01.T01:CDS 50.0%
!! CCAGCTCTGAAGCTTCTAGT+TGG + Chr4:88134507-88134526 None:intergenic 50.0%
!! CTCTGAAACTGACCCTGCTT+TGG + Chr4:88135065-88135084 None:intergenic 50.0%
!! GCTCTGAAGCTTCTAGTTGG+AGG + Chr4:88134504-88134523 None:intergenic 50.0%
!!! GGGTTGCACTGTTTTGGAGA+TGG - Chr4:88133731-88133750 MsG0480023655.01.T01:intron 50.0%
ACCTCCATGGGCCAGTATGA+AGG - Chr4:88133764-88133783 MsG0480023655.01.T01:intron 55.0%
ACTTGGAGTACGTCTCCGGT+GGG - Chr4:88133083-88133102 MsG0480023655.01.T01:intron 55.0%
AGCCCACCAGATGGAGAAAC+GGG + Chr4:88134824-88134843 None:intergenic 55.0%
AGCCCTCTGCATCCAAAAGC+TGG - Chr4:88132001-88132020 MsG0480023655.01.T01:CDS 55.0%
CAAAATAGGCGGGCCGTTGA+GGG - Chr4:88135139-88135158 MsG0480023655.01.T01:CDS 55.0%
CCAGGTTCACGCTGGACAAA+AGG - Chr4:88132203-88132222 MsG0480023655.01.T01:CDS 55.0%
CCTCCATGGGCCAGTATGAA+GGG - Chr4:88133765-88133784 MsG0480023655.01.T01:intron 55.0%
CCTCTGCATCCAAAAGCTGG+AGG - Chr4:88132004-88132023 MsG0480023655.01.T01:CDS 55.0%
CTACTCCGCAGCCTAGAAGT+GGG - Chr4:88134927-88134946 MsG0480023655.01.T01:intron 55.0%
CTGATCTGGCAGGACTTCGA+GGG + Chr4:88132169-88132188 None:intergenic 55.0%
CTTCTAGGCTGCGGAGTAGA+TGG + Chr4:88134926-88134945 None:intergenic 55.0%
GCAAGTCCTGAAGAATCGCC+GGG + Chr4:88133170-88133189 None:intergenic 55.0%
GCGCACCATTCCCGTGATTT+AGG + Chr4:88132604-88132623 None:intergenic 55.0%
GGATCCACTGGATCGTCCTT+CGG - Chr4:88134052-88134071 MsG0480023655.01.T01:intron 55.0%
GTCCCGTTTCTCCATCTGGT+GGG - Chr4:88134819-88134838 MsG0480023655.01.T01:intron 55.0%
TACTTGGAGTACGTCTCCGG+TGG - Chr4:88133082-88133101 MsG0480023655.01.T01:intron 55.0%
TCACCCTTCATACTGGCCCA+TGG + Chr4:88133771-88133790 None:intergenic 55.0%
TCCTTACTGGATGGCACCTG+AGG - Chr4:88133574-88133593 MsG0480023655.01.T01:CDS 55.0%
TCGGAAGCAGCTGGTATCTC+TGG - Chr4:88134474-88134493 MsG0480023655.01.T01:intron 55.0%
TCTACTCCGCAGCCTAGAAG+TGG - Chr4:88134926-88134945 MsG0480023655.01.T01:intron 55.0%
TCTGATCTGGCAGGACTTCG+AGG + Chr4:88132170-88132189 None:intergenic 55.0%
TGATCTGGCAGGACTTCGAG+GGG + Chr4:88132168-88132187 None:intergenic 55.0%
TGTCCCGTTTCTCCATCTGG+TGG - Chr4:88134818-88134837 MsG0480023655.01.T01:intron 55.0%
! ACCTCAGGTGCCATCCAGTA+AGG + Chr4:88133578-88133597 None:intergenic 55.0%
! CCTCCAGCTTTTGGATGCAG+AGG + Chr4:88132007-88132026 None:intergenic 55.0%
! CCTTTTGTCCAGCGTGAACC+TGG + Chr4:88132206-88132225 None:intergenic 55.0%
!! GGAGGCACTGCTTATCAGGA+GGG - Chr4:88135038-88135057 MsG0480023655.01.T01:CDS 55.0%
!! TGGAGGCACTGCTTATCAGG+AGG - Chr4:88135037-88135056 MsG0480023655.01.T01:CDS 55.0%
CCAAAATAGGCGGGCCGTTG+AGG - Chr4:88135138-88135157 MsG0480023655.01.T01:CDS 60.0%
CCCTTCATACTGGCCCATGG+AGG + Chr4:88133768-88133787 None:intergenic 60.0%
CTACAAGCCCAGGTTCACGC+TGG - Chr4:88132195-88132214 MsG0480023655.01.T01:CDS 60.0%
GGCAAACGTAGCCCACCAGA+TGG + Chr4:88134833-88134852 None:intergenic 60.0%
GGGAATGGTGCGCAGCAACT+TGG - Chr4:88132611-88132630 MsG0480023655.01.T01:intron 60.0%
! CCTCAACGGCCCGCCTATTT+TGG + Chr4:88135141-88135160 None:intergenic 60.0%
!! GCTGAGGCACCTCCAGCTTT+TGG + Chr4:88132016-88132035 None:intergenic 60.0%
CCACTGGATCGTCCTTCGGC+TGG - Chr4:88134056-88134075 MsG0480023655.01.T01:intron 65.0%
CCAGCCGAAGGACGATCCAG+TGG + Chr4:88134059-88134078 None:intergenic 65.0%
GCAGGACTTCGAGGGGCTGA+AGG + Chr4:88132161-88132180 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
Chr4 gene 88131996 88135288 88131996 ID=MsG0480023655.01;Name=MsG0480023655.01
Chr4 mRNA 88131996 88135288 88131996 ID=MsG0480023655.01.T01;Parent=MsG0480023655.01;Name=MsG0480023655.01.T01;_AED=0.50;_eAED=0.52;_QI=0|0|0|1|1|1|8|0|417
Chr4 exon 88135008 88135288 88135008 ID=MsG0480023655.01.T01:exon:6463;Parent=MsG0480023655.01.T01
Chr4 exon 88134647 88134735 88134647 ID=MsG0480023655.01.T01:exon:6462;Parent=MsG0480023655.01.T01
Chr4 exon 88134351 88134412 88134351 ID=MsG0480023655.01.T01:exon:6461;Parent=MsG0480023655.01.T01
Chr4 exon 88133866 88133959 88133866 ID=MsG0480023655.01.T01:exon:6460;Parent=MsG0480023655.01.T01
Chr4 exon 88133689 88133747 88133689 ID=MsG0480023655.01.T01:exon:6459;Parent=MsG0480023655.01.T01
Chr4 exon 88133498 88133600 88133498 ID=MsG0480023655.01.T01:exon:6458;Parent=MsG0480023655.01.T01
Chr4 exon 88132746 88132812 88132746 ID=MsG0480023655.01.T01:exon:6457;Parent=MsG0480023655.01.T01
Chr4 exon 88131996 88132494 88131996 ID=MsG0480023655.01.T01:exon:6456;Parent=MsG0480023655.01.T01
Chr4 CDS 88135008 88135288 88135008 ID=MsG0480023655.01.T01:cds;Parent=MsG0480023655.01.T01
Chr4 CDS 88134647 88134735 88134647 ID=MsG0480023655.01.T01:cds;Parent=MsG0480023655.01.T01
Chr4 CDS 88134351 88134412 88134351 ID=MsG0480023655.01.T01:cds;Parent=MsG0480023655.01.T01
Chr4 CDS 88133866 88133959 88133866 ID=MsG0480023655.01.T01:cds;Parent=MsG0480023655.01.T01
Chr4 CDS 88133689 88133747 88133689 ID=MsG0480023655.01.T01:cds;Parent=MsG0480023655.01.T01
Chr4 CDS 88133498 88133600 88133498 ID=MsG0480023655.01.T01:cds;Parent=MsG0480023655.01.T01
Chr4 CDS 88132746 88132812 88132746 ID=MsG0480023655.01.T01:cds;Parent=MsG0480023655.01.T01
Chr4 CDS 88131996 88132494 88131996 ID=MsG0480023655.01.T01:cds;Parent=MsG0480023655.01.T01
Gene Sequence

>MsG0480023655.01.T01

ATGTCAGCCCTCTGCATCCAAAAGCTGGAGGTGCCTCAGCAGAGTTGCCTACAAGACGTCCAGATGTCAGATGCGAAACAACAAAGTTATCGGTTACCGCTTCCTCCAATAAAAGTGACTAAATCTTGTCCGTTTTCTCCGACTTATTCTGCGTCTTCAACTCCTTCAGCCCCTCGAAGTCCTGCCAGATCAGATAATGCTACAAGCCCAGGTTCACGCTGGACAAAAGGGCATTTGCTTGGAAGGGGAACATTTGGACATGTTTATCTTGGTTTCAGCAGAGAAAGTGGCGAGATGTGTGCAATGAAGGAGGTAACCCTTCTTTCAGATGACCCTAAATCACGGGAATGGTGCGCAGCAACTTGGCCAAGAAATGCATTGCTAAGTCAGTTGCGGCATCCAAACATAGTCCAGTATTATGGGTCTGAGACGGGACATCAAAGGTGCAAACATATTGGTGACCCTAATGGACAAATAAAACTAGCAGATTTTGGGATGGCAAAAATTGTAAGAGCGTTTATAAGATATAACTGGGCAGGCTCTTTCATTTCTTTTAAAGGAAGTCCTTACTGGATGGCACCTGAGGTTATAAAATTCAAAGGTTGTAATCTTGCTGTTGACATATGGAGTCTGGGTTGCACTGTTTTGGAGATGGCAACAACAAAACCTCCATGGGCCAGTATGAAGGACTCGGAAGCAGCTGGTATCTCTGGTATCCCTCCAACTAGAAGCTTCAGAGCTGGTTATGAATCAAGTAATGCTCAGAAAAAAAGGATCGTCTCATGTCCCGTTTCTCCATCTGGTGGGCTACGTTTGCCTTCTAGATCAACGAATTCAAGCGGGATGATATCTCCCTCTCCAACATCCGGTCTTCATACTGCATCTGGCCCATCTACTCCGCAGCCTAGAAGTGGGAAAATCCCATATCATCAAACAAAGCAACCTATATCCCACAGGAAGCTCTGGGTACAATCCAAAAGTCCCAACTGGTTTTCAGTCAAATGGAGGCACTGCTTATCAGGAGGGTCCAAAGCAGGGTCAGTTTCAGAGAAATATCAAGCTAGACGGGATATAATTTCACCTGAAAATAATGCTCTTGCAAACCAAAATAGGCGGGCCGTTGAGGGAGTCCGAAGAGAATTTCGTAATGAGAAGGCATGTTTGGCTGATTGTGCGTCTCAACAACAGTTGGTGAGGGATAATGTGAGGCCAAATGCACCTATACATCGTAAGTCTACTGGTGCACCATGCTGA
Protein sequence

>MsG0480023655.01.T01

MSALCIQKLEVPQQSCLQDVQMSDAKQQSYRLPLPPIKVTKSCPFSPTYSASSTPSAPRSPARSDNATSPGSRWTKGHLLGRGTFGHVYLGFSRESGEMCAMKEVTLLSDDPKSREWCAATWPRNALLSQLRHPNIVQYYGSETGHQRCKHIGDPNGQIKLADFGMAKIVRAFIRYNWAGSFISFKGSPYWMAPEVIKFKGCNLAVDIWSLGCTVLEMATTKPPWASMKDSEAAGISGIPPTRSFRAGYESSNAQKKRIVSCPVSPSGGLRLPSRSTNSSGMISPSPTSGLHTASGPSTPQPRSGKIPYHQTKQPISHRKLWVQSKSPNWFSVKWRHCLSGGSKAGSVSEKYQARRDIISPENNALANQNRRAVEGVRREFRNEKACLADCASQQQLVRDNVRPNAPIHRKSTGAPC*