AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0480023787.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480023787.01.T01 MTR_8g102240 90.645 310 3 1 1 284 1 310 0.0 580
MsG0480023787.01.T01 MTR_8g102240 66.981 106 30 2 246 351 384 484 2.14e-37 140
MsG0480023787.01.T01 MTR_8g102240 90.645 310 3 1 1 284 1 310 0.0 580
MsG0480023787.01.T01 MTR_8g102240 100.000 66 0 0 286 351 420 485 9.95e-38 141
MsG0480023787.01.T01 MTR_4g088245 59.809 209 45 6 30 208 47 246 1.17e-74 233
MsG0480023787.01.T01 MTR_4g078875 54.936 233 64 6 30 231 26 248 5.70e-74 231
MsG0480023787.01.T01 MTR_8g069160 68.902 164 40 4 30 189 47 203 1.77e-73 228
MsG0480023787.01.T01 MTR_2g090735 70.732 164 36 4 30 188 27 183 4.79e-73 228
MsG0480023787.01.T01 MTR_2g014680 60.000 190 62 5 3 188 8 187 8.98e-70 221
MsG0480023787.01.T01 MTR_1g093680 56.098 164 62 4 27 188 36 191 1.74e-58 196
MsG0480023787.01.T01 MTR_5g053430 56.707 164 61 3 27 188 36 191 6.07e-57 191
MsG0480023787.01.T01 MTR_5g053430 56.707 164 61 3 27 188 36 191 8.20e-57 191
MsG0480023787.01.T01 MTR_7g033320 50.602 166 73 4 25 187 30 189 1.04e-48 171
MsG0480023787.01.T01 MTR_1g093670 57.664 137 51 3 37 173 13 142 2.05e-47 164
MsG0480023787.01.T01 MTR_4g078895 68.182 44 13 1 46 89 36 78 1.17e-11 60.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480023787.01.T01 AT4G29230 73.799 229 28 6 3 202 4 229 4.14e-111 333
MsG0480023787.01.T01 AT4G29230 56.250 80 25 5 280 349 417 496 1.33e-14 75.1
MsG0480023787.01.T01 AT4G29230 73.478 230 28 7 3 202 4 230 2.00e-110 329
MsG0480023787.01.T01 AT4G29230 73.478 230 28 7 3 202 4 230 2.13e-109 328
MsG0480023787.01.T01 AT4G29230 56.250 80 25 5 280 349 418 497 1.36e-14 75.1
MsG0480023787.01.T01 AT5G56620 47.395 403 134 11 10 338 4 402 2.60e-104 312
MsG0480023787.01.T01 AT5G56620 47.395 403 134 11 10 338 4 402 3.54e-104 312
MsG0480023787.01.T01 AT5G56620 59.924 262 65 6 10 235 4 261 8.62e-97 293
MsG0480023787.01.T01 AT4G28500 55.963 218 60 4 9 196 17 228 5.07e-74 231
MsG0480023787.01.T01 AT1G28470 65.060 166 44 3 30 188 53 211 1.55e-69 220
MsG0480023787.01.T01 AT1G25580 54.268 164 60 4 27 188 36 186 3.63e-52 179
MsG0480023787.01.T01 AT5G14490 50.299 167 74 5 25 188 30 190 1.01e-46 162
MsG0480023787.01.T01 AT5G14490 50.299 167 74 5 25 188 30 190 1.06e-46 160
MsG0480023787.01.T01 AT5G14490 50.299 167 74 5 25 188 33 193 1.28e-46 162
MsG0480023787.01.T01 AT5G14490 50.299 167 74 5 25 188 33 193 1.46e-46 162
MsG0480023787.01.T01 AT3G01600 48.521 169 78 4 23 188 28 190 2.30e-45 159

Find 101 sgRNAs with CRISPR-Local

Find 272 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGCCGAAATGATCAGATTTA+AGG 0.202690 4:-89842559 None:intergenic
CTTCCATTGATATTATAATT+AGG 0.223614 4:-89842407 None:intergenic
GCATTTGTGAAGCTTGTTAA+AGG 0.254170 4:-89842521 None:intergenic
AGCTTCTTGTTGGTTTCTAA+TGG 0.256606 4:-89845566 None:intergenic
ACCAGACCTGTTATGGTTAA+TGG 0.262903 4:+89842142 MsG0480023787.01.T01:CDS
CCTGTTGTATATGCCTTTGA+TGG 0.263920 4:-89842031 None:intergenic
TGGTTTAGAGGAAGTCATTA+TGG 0.275420 4:+89844819 MsG0480023787.01.T01:CDS
GGTTGAAATACTCTTCTTAC+TGG 0.281746 4:+89845593 MsG0480023787.01.T01:CDS
TGTTTACCATTAACCATAAC+AGG 0.301271 4:-89842148 None:intergenic
CACCTTAAATCTGATCATTT+CGG 0.305151 4:+89842557 MsG0480023787.01.T01:CDS
CATCACCCAATTTGTCTTCT+CGG 0.314134 4:-89842227 None:intergenic
CACAGCCAAGACAGTGTAAT+TGG 0.340413 4:+89842321 MsG0480023787.01.T01:CDS
ATGGTTAATGGTAAACAAAA+AGG 0.341742 4:+89842154 MsG0480023787.01.T01:CDS
GTGTGCAACGGAACAAGTTT+TGG 0.344961 4:+89845866 MsG0480023787.01.T01:three_prime_UTR
AGGAAGAAACTGTTAGAATA+AGG 0.352029 4:-89840713 None:intergenic
TATATGCCTTTGATGGTCTA+TGG 0.358040 4:-89842024 None:intergenic
GAAAACCCGAGAAGACAAAT+TGG 0.361472 4:+89842221 MsG0480023787.01.T01:CDS
TCAACCACTCAGCTTCTTGT+TGG 0.371776 4:-89845576 None:intergenic
GGTTTAGAGGAAGTCATTAT+GGG 0.375357 4:+89844820 MsG0480023787.01.T01:CDS
CATGTTCTTTGACTCAACTT+TGG 0.392039 4:-89841606 None:intergenic
TCCACAGCGAGGGCAGTGTT+TGG 0.404918 4:-89841247 None:intergenic
TCAATCAATTCTTGATCTGT+TGG 0.405063 4:-89841572 None:intergenic
TGGTAAGACCAGACCTGTTA+TGG 0.407089 4:+89842135 MsG0480023787.01.T01:CDS
GTGAAGCTTGTTAAAGGACT+AGG 0.412943 4:-89842515 None:intergenic
TTAAAGTAGAGAGCAAATTC+TGG 0.413171 4:+89840633 MsG0480023787.01.T01:five_prime_UTR
ATCACCCAATTTGTCTTCTC+GGG 0.413577 4:-89842226 None:intergenic
GGAAGAAGAGATAGTGGAAG+TGG 0.419947 4:+89842425 MsG0480023787.01.T01:CDS
AATCTGAGTAACAATTTCCT+TGG 0.423878 4:-89842459 None:intergenic
GAATTCATTCTCACTATTGA+AGG 0.424881 4:+89841653 MsG0480023787.01.T01:CDS
ATTAGTGCAACAACAACAAT+TGG 0.429673 4:+89842365 MsG0480023787.01.T01:CDS
ATCAATGGAAGAAGAGATAG+TGG 0.430228 4:+89842419 MsG0480023787.01.T01:CDS
TCCTTGTAAGTCACACTCTT+CGG 0.430646 4:-89842080 None:intergenic
GAAACAAGATGGCACAAAAC+TGG 0.433929 4:+89842115 MsG0480023787.01.T01:CDS
AACAAGCTTCACAAATGCCT+TGG 0.435738 4:+89842526 MsG0480023787.01.T01:CDS
CCATCAAAGGCATATACAAC+AGG 0.455100 4:+89842031 MsG0480023787.01.T01:CDS
ACCATTAACCATAACAGGTC+TGG 0.456313 4:-89842143 None:intergenic
AGGATGGATGATGATTACTT+TGG 0.461361 4:-89845763 None:intergenic
GAACCTAATTATAATATCAA+TGG 0.462340 4:+89842404 MsG0480023787.01.T01:CDS
GGATCAAATTTCACTCCTGC+TGG 0.469166 4:-89841551 None:intergenic
CATCATCATGATTAGAATGA+AGG 0.470307 4:+89845643 MsG0480023787.01.T01:exon
TCAGACCAATTACACTGTCT+TGG 0.476749 4:-89842326 None:intergenic
GATGAAATGTCTGCTGTTGT+TGG 0.479390 4:+89842488 MsG0480023787.01.T01:CDS
ACAATGAACTGTGCAGGATA+AGG 0.480436 4:-89840803 None:intergenic
CTCACTATTGAAGGAGAAGA+TGG 0.486078 4:+89841662 MsG0480023787.01.T01:CDS
AAGGTCTGCGTCTGGTTTAG+AGG 0.487143 4:+89844807 MsG0480023787.01.T01:CDS
AACTAAGGTGGCTTTAAAGA+AGG 0.494819 4:-89840665 None:intergenic
CTTGTTCTCTACACCAACTT+CGG 0.499621 4:+89842190 MsG0480023787.01.T01:CDS
CTAATATATCAATCTCTTGA+GGG 0.504687 4:+89841042 MsG0480023787.01.T01:five_prime_UTR
AGTGTTTGGATCCACACAAC+TGG 0.507034 4:-89841233 None:intergenic
CATTCTAATCATGATGATGA+TGG 0.514227 4:-89845639 None:intergenic
TGAAGCTTGTTAAAGGACTA+GGG 0.515511 4:-89842514 None:intergenic
AGGCACCGAAGTTCATAAAC+CGG 0.516038 4:-89845815 None:intergenic
AAGAGCAAAATAACTAAGGA+TGG 0.519614 4:-89845779 None:intergenic
ATCCATACAATGAACTGTGC+AGG 0.524350 4:-89840809 None:intergenic
CTAGTATGCAGTTACTTACA+AGG 0.524601 4:-89840773 None:intergenic
GGTGGTGGAAGGTCTGCGTC+TGG 0.526615 4:+89844799 MsG0480023787.01.T01:CDS
ACAACAATTGGTGAAGGAAG+TGG 0.529260 4:+89842377 MsG0480023787.01.T01:CDS
TGTGACTTACAAGGAAGTAC+AGG 0.531187 4:+89842088 MsG0480023787.01.T01:CDS
GTGATTATGCTAAGTGGTGT+TGG 0.531304 4:+89841064 MsG0480023787.01.T01:five_prime_UTR
AGAATGAATTCATCAATCAA+AGG 0.532417 4:-89841641 None:intergenic
CTCTCTACTTTAACTGACTG+AGG 0.532592 4:-89840623 None:intergenic
AAAACCCGAGAAGACAAATT+GGG 0.533154 4:+89842222 MsG0480023787.01.T01:CDS
TTGGAAAGTGAGTTGAGGTA+TGG 0.540037 4:-89845734 None:intergenic
TTTAAGGTGTTGAATATCCA+AGG 0.540367 4:-89842543 None:intergenic
CAGCAACAACATCATAAACT+AGG 0.542717 4:+89844778 MsG0480023787.01.T01:CDS
AAGTGGAAGTTCTTCTTCCA+AGG 0.544042 4:+89842442 MsG0480023787.01.T01:CDS
TCTAATATATCAATCTCTTG+AGG 0.544719 4:+89841041 MsG0480023787.01.T01:five_prime_UTR
GAATGAATTCATCAATCAAA+GGG 0.558039 4:-89841640 None:intergenic
TGTGGACACAAATTTGATCA+AGG 0.561466 4:+89841264 MsG0480023787.01.T01:CDS
CAACATCATAAACTAGGTGG+TGG 0.571157 4:+89844784 MsG0480023787.01.T01:CDS
AGATAGATAGATATAAACTA+AGG 0.572710 4:-89840680 None:intergenic
ACCGAAGAGTGTGACTTACA+AGG 0.573730 4:+89842079 MsG0480023787.01.T01:CDS
TGATCTCATAGATTCTAAGC+TGG 0.574339 4:+89841203 MsG0480023787.01.T01:CDS
AAACTGTTAGAATAAGGTTG+AGG 0.575223 4:-89840707 None:intergenic
CAAATTTGTGTCCACAGCGA+GGG 0.577429 4:-89841257 None:intergenic
CAAATTTGATCAAGGCAAGC+CGG 0.585518 4:+89841272 MsG0480023787.01.T01:CDS
CTGTTAGAATAAGGTTGAGG+TGG 0.589168 4:-89840704 None:intergenic
ATCATAAACTAGGTGGTGGA+AGG 0.591383 4:+89844788 MsG0480023787.01.T01:CDS
TCCAAACACTGCCCTCGCTG+TGG 0.598125 4:+89841246 MsG0480023787.01.T01:CDS
CTGGAAGAGCACCAGTTGTG+TGG 0.599801 4:+89841222 MsG0480023787.01.T01:CDS
ATACAACAGGAACACGAAAG+AGG 0.605890 4:+89842044 MsG0480023787.01.T01:CDS
TACTTTAACTGACTGAGGCA+AGG 0.609591 4:-89840618 None:intergenic
TGGAACTAACAGGATTGGCT+AGG 0.614683 4:+89841524 MsG0480023787.01.T01:intron
TTGTTGTCATGAGGGTCGAC+TGG 0.619843 4:-89845616 None:intergenic
TTGAGGGTGATTATGCTAAG+TGG 0.628559 4:+89841058 MsG0480023787.01.T01:five_prime_UTR
TAGATAGATATAAACTAAGG+TGG 0.629951 4:-89840677 None:intergenic
TCAAATTTGTGTCCACAGCG+AGG 0.631442 4:-89841258 None:intergenic
GATTGGCTAGGTCTACCAGC+AGG 0.635385 4:+89841536 MsG0480023787.01.T01:CDS
TGATGATGGTTGTTGTCATG+AGG 0.638720 4:-89845625 None:intergenic
TTATTAATATAATACTAACA+AGG 0.644453 4:-89841129 None:intergenic
GATGATGGTTGTTGTCATGA+GGG 0.647114 4:-89845624 None:intergenic
GCAACAACAACAATTGGTGA+AGG 0.648732 4:+89842371 MsG0480023787.01.T01:CDS
ACAATTGGTGAAGGAAGTGG+TGG 0.650368 4:+89842380 MsG0480023787.01.T01:CDS
GAAACACTAACTGTGTGCAA+CGG 0.654931 4:+89845854 MsG0480023787.01.T01:three_prime_UTR
GTACAGGAGGAGAAACAAGA+TGG 0.661050 4:+89842104 MsG0480023787.01.T01:CDS
GACTTACAAGGAAGTACAGG+AGG 0.666650 4:+89842091 MsG0480023787.01.T01:CDS
GTTTAGAGGAAGTCATTATG+GGG 0.668096 4:+89844821 MsG0480023787.01.T01:CDS
AAAAGTGACAAAGAACAAAG+GGG 0.680561 4:+89845892 MsG0480023787.01.T01:three_prime_UTR
AACGTCGTCTGATATCAAAG+AGG 0.681906 4:+89844852 MsG0480023787.01.T01:CDS
GAAACCAACAAGAAGCTGAG+TGG 0.685593 4:+89845572 MsG0480023787.01.T01:CDS
CAACAACATCATAAACTAGG+TGG 0.704443 4:+89844781 MsG0480023787.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAATAAAAAGCAATTAAA+GGG - Chr4:89841490-89841509 None:intergenic 10.0%
!! AATTAATTAATTAATTAACC+TGG - Chr4:89841716-89841735 None:intergenic 10.0%
!! CAATAAAAAATTAAGAAAAT+TGG - Chr4:89840988-89841007 None:intergenic 10.0%
!! TAAAAATAAAAAGCAATTAA+AGG - Chr4:89841491-89841510 None:intergenic 10.0%
!! TTATTAATATAATACTAACA+AGG - Chr4:89841132-89841151 None:intergenic 10.0%
!!! AAAAAAATTATCTCTAATTT+TGG - Chr4:89842857-89842876 None:intergenic 10.0%
!!! ATTTTTAATTTGAATTTCAA+TGG + Chr4:89841504-89841523 MsG0480023787.01.T01:intron 10.0%
!!! CAATTTTCTTAATTTTTTAT+TGG + Chr4:89840986-89841005 MsG0480023787.01.T01:intron 10.0%
!! AAAAAAAAATTGTGTTTGTT+CGG + Chr4:89844397-89844416 MsG0480023787.01.T01:intron 15.0%
!! ACTAGTACATTAAATAAAAT+CGG - Chr4:89844171-89844190 None:intergenic 15.0%
!! AGTCTTTAGTTATAAAAAAT+AGG - Chr4:89845000-89845019 None:intergenic 15.0%
!! ATAATTTGAAAAAATGAAAG+TGG - Chr4:89842718-89842737 None:intergenic 15.0%
!! ATATTTGATACTATCATTAT+AGG + Chr4:89843314-89843333 MsG0480023787.01.T01:intron 15.0%
!! ATCATGTAGAAATTAAAATT+TGG - Chr4:89840934-89840953 None:intergenic 15.0%
!! ATTAATTTAAATTCTCAGTT+AGG + Chr4:89841789-89841808 MsG0480023787.01.T01:intron 15.0%
!! TTACCAATAAAAAATATTAG+AGG - Chr4:89842880-89842899 None:intergenic 15.0%
!! TTATATGAAATTTCAACATT+CGG + Chr4:89843018-89843037 MsG0480023787.01.T01:intron 15.0%
!! TTCTCTTAATTAAGTTAATA+AGG - Chr4:89844278-89844297 None:intergenic 15.0%
!!! AATAATTTTCAATTTTGTCT+TGG + Chr4:89843890-89843909 MsG0480023787.01.T01:intron 15.0%
!!! TAAATTCATTGATTTATACT+AGG + Chr4:89844593-89844612 MsG0480023787.01.T01:intron 15.0%
!!! TAATTTTTTATTGGTTTTGT+AGG + Chr4:89840995-89841014 MsG0480023787.01.T01:intron 15.0%
!!! TTGTCTTTTTTTGTTTATTT+GGG - Chr4:89845685-89845704 None:intergenic 15.0%
!!! TTTCCTCTAATATTTTTTAT+TGG + Chr4:89842874-89842893 MsG0480023787.01.T01:intron 15.0%
!! AAAAAAGAGCAAAATAACTA+AGG - Chr4:89845786-89845805 None:intergenic 20.0%
!! AACTTTAATAATTTGACTCA+CGG - Chr4:89843993-89844012 None:intergenic 20.0%
!! AATAAAGATGAAGATGAAAA+TGG - Chr4:89845028-89845047 None:intergenic 20.0%
!! ACCTATTTATTTATTTATCG+TGG + Chr4:89844091-89844110 MsG0480023787.01.T01:intron 20.0%
!! AGATAGATAGATATAAACTA+AGG - Chr4:89840683-89840702 None:intergenic 20.0%
!! CATGAAAAGAAGATTAATTA+GGG - Chr4:89845514-89845533 None:intergenic 20.0%
!! CTAGTACATTAAATAAAATC+GGG - Chr4:89844170-89844189 None:intergenic 20.0%
!! CTTCCATTGATATTATAATT+AGG - Chr4:89842410-89842429 None:intergenic 20.0%
!! GAAATAGAAGAAGAAAAAAA+AGG - Chr4:89840736-89840755 None:intergenic 20.0%
!! GAACCTAATTATAATATCAA+TGG + Chr4:89842404-89842423 MsG0480023787.01.T01:CDS 20.0%
!! TCATGAAAAGAAGATTAATT+AGG - Chr4:89845515-89845534 None:intergenic 20.0%
!!! CAAACACAATTTTTTTTTAC+TGG - Chr4:89844395-89844414 None:intergenic 20.0%
!!! GTTGTCTTTTTTTGTTTATT+TGG - Chr4:89845686-89845705 None:intergenic 20.0%
!!! TAGATTTTTAAAAGAGAATG+AGG + Chr4:89844064-89844083 MsG0480023787.01.T01:intron 20.0%
!!! TTGTGAATTTTAACAAATCA+TGG - Chr4:89844362-89844381 None:intergenic 20.0%
! AAAAAAGTGACAAAGAACAA+AGG + Chr4:89845890-89845909 MsG0480023787.01.T01:three_prime_UTR 25.0%
! AAAAAGTGACAAAGAACAAA+GGG + Chr4:89845891-89845910 MsG0480023787.01.T01:three_prime_UTR 25.0%
! AAAGAACATGCATGAAATTA+AGG + Chr4:89843073-89843092 MsG0480023787.01.T01:intron 25.0%
! AAGAACATGCATGAAATTAA+GGG + Chr4:89843074-89843093 MsG0480023787.01.T01:intron 25.0%
! AATATAGCATAGCATTTGAT+TGG + Chr4:89842914-89842933 MsG0480023787.01.T01:intron 25.0%
! ACATGAAATGAGTTTAATGA+AGG - Chr4:89842802-89842821 None:intergenic 25.0%
! ACTACAAGAAGAAAGATTTA+AGG - Chr4:89843689-89843708 None:intergenic 25.0%
! ACTATGGTGACATAATTTAA+TGG + Chr4:89841339-89841358 MsG0480023787.01.T01:intron 25.0%
! AGAATGAATTCATCAATCAA+AGG - Chr4:89841644-89841663 None:intergenic 25.0%
! AGGAAAAAAAGAAGATGATA+TGG - Chr4:89845118-89845137 None:intergenic 25.0%
! ATGGTTAATGGTAAACAAAA+AGG + Chr4:89842154-89842173 MsG0480023787.01.T01:CDS 25.0%
! ATGTATAATATGTATCCACA+TGG + Chr4:89844743-89844762 MsG0480023787.01.T01:intron 25.0%
! CTAATATATCAATCTCTTGA+GGG + Chr4:89841042-89841061 MsG0480023787.01.T01:five_prime_UTR 25.0%
! GAATGAATTCATCAATCAAA+GGG - Chr4:89841643-89841662 None:intergenic 25.0%
! GACTGAGAATATAAAAGAAA+TGG - Chr4:89840835-89840854 None:intergenic 25.0%
! GCCACGATAAATAAATAAAT+AGG - Chr4:89844095-89844114 None:intergenic 25.0%
! TAGATAGATATAAACTAAGG+TGG - Chr4:89840680-89840699 None:intergenic 25.0%
! TCAAACACTTACAAATACTT+TGG - Chr4:89842769-89842788 None:intergenic 25.0%
! TCAATATGTTGAACCAAAAT+GGG + Chr4:89844541-89844560 MsG0480023787.01.T01:intron 25.0%
! TCTAATATATCAATCTCTTG+AGG + Chr4:89841041-89841060 MsG0480023787.01.T01:five_prime_UTR 25.0%
! TTAAAGTTCTATCACGATTT+AGG - Chr4:89844253-89844272 None:intergenic 25.0%
! TTGAATGTAACTATGTATGT+CGG - Chr4:89842695-89842714 None:intergenic 25.0%
! TTGATACTATCATTATAGGT+TGG + Chr4:89843318-89843337 MsG0480023787.01.T01:intron 25.0%
!! CCAACAAAATGAAAATTTTC+AGG + Chr4:89843640-89843659 MsG0480023787.01.T01:intron 25.0%
!! CCTGAAAATTTTCATTTTGT+TGG - Chr4:89843643-89843662 None:intergenic 25.0%
!! GTCCATACAAATTAATTTTG+CGG - Chr4:89843155-89843174 None:intergenic 25.0%
!! TACATTTTCTTTTCTTAGCT+AGG - Chr4:89843233-89843252 None:intergenic 25.0%
!! TATAATCCCTTTTCTCATTT+TGG + Chr4:89841366-89841385 MsG0480023787.01.T01:intron 25.0%
!!! ATTTTTTACAAACAAGACCA+AGG - Chr4:89845355-89845374 None:intergenic 25.0%
!!! CATTTTAAAGATCTAAAGAG+AGG - Chr4:89845138-89845157 None:intergenic 25.0%
!!! TAGGAAAGGTTTTATATATG+TGG + Chr4:89844612-89844631 MsG0480023787.01.T01:intron 25.0%
!!! TCATTGATTTATACTAGGAA+AGG + Chr4:89844598-89844617 MsG0480023787.01.T01:intron 25.0%
!!! TTAACTTGGTGCAAATTAAT+GGG + Chr4:89844514-89844533 MsG0480023787.01.T01:intron 25.0%
!!! TTATGTCACCATAGTTTTAA+AGG - Chr4:89841334-89841353 None:intergenic 25.0%
!!! TTTTTTTTACTGGAAAGAAC+AGG - Chr4:89844385-89844404 None:intergenic 25.0%
AAAAGTGACAAAGAACAAAG+GGG + Chr4:89845892-89845911 MsG0480023787.01.T01:three_prime_UTR 30.0%
AAACTGTTAGAATAAGGTTG+AGG - Chr4:89840710-89840729 None:intergenic 30.0%
AACATGAAGAAGAGAAAGAA+GGG + Chr4:89842269-89842288 MsG0480023787.01.T01:intron 30.0%
AAGAAATAAACTTGAGCAAG+AGG + Chr4:89841897-89841916 MsG0480023787.01.T01:intron 30.0%
AAGAGCAAAATAACTAAGGA+TGG - Chr4:89845782-89845801 None:intergenic 30.0%
AATCTGAGTAACAATTTCCT+TGG - Chr4:89842462-89842481 None:intergenic 30.0%
AGAAATAAACTTGAGCAAGA+GGG + Chr4:89841898-89841917 MsG0480023787.01.T01:intron 30.0%
AGGAAGAAACTGTTAGAATA+AGG - Chr4:89840716-89840735 None:intergenic 30.0%
ATAGCTACCAAAATGAGAAA+AGG - Chr4:89841376-89841395 None:intergenic 30.0%
ATGAAATTTCAACATTCGGT+TGG + Chr4:89843022-89843041 MsG0480023787.01.T01:intron 30.0%
ATGCATGAAATTAAGGGTTA+AGG + Chr4:89843080-89843099 MsG0480023787.01.T01:intron 30.0%
ATTAGTGCAACAACAACAAT+TGG + Chr4:89842365-89842384 MsG0480023787.01.T01:CDS 30.0%
ATTTCGAAAAAGCTATGATG+AGG + Chr4:89842589-89842608 MsG0480023787.01.T01:CDS 30.0%
CAAAGTTAGGTGACTTAATT+AGG - Chr4:89841949-89841968 None:intergenic 30.0%
CAATATGTTGAACCAAAATG+GGG + Chr4:89844542-89844561 MsG0480023787.01.T01:intron 30.0%
CACCTTAAATCTGATCATTT+CGG + Chr4:89842557-89842576 MsG0480023787.01.T01:CDS 30.0%
CAGTGAGAGAAGAAAAATAA+AGG - Chr4:89840598-89840617 None:intergenic 30.0%
CATCATCATGATTAGAATGA+AGG + Chr4:89845643-89845662 MsG0480023787.01.T01:exon 30.0%
CTCAATATGTTGAACCAAAA+TGG + Chr4:89844540-89844559 MsG0480023787.01.T01:intron 30.0%
GAATTCATTCTCACTATTGA+AGG + Chr4:89841653-89841672 MsG0480023787.01.T01:CDS 30.0%
GATATTCATTTCAAACTCTG+AGG - Chr4:89845460-89845479 None:intergenic 30.0%
TAAAGGGAGAGAAATCAATA+AGG - Chr4:89841474-89841493 None:intergenic 30.0%
TAGCTACCAAAATGAGAAAA+GGG - Chr4:89841375-89841394 None:intergenic 30.0%
TCAATCAATTCTTGATCTGT+TGG - Chr4:89841575-89841594 None:intergenic 30.0%
TCATTGCCAAAATCAAAGTT+AGG - Chr4:89841962-89841981 None:intergenic 30.0%
TGAATTTCAATGGAACTAAC+AGG + Chr4:89841514-89841533 MsG0480023787.01.T01:intron 30.0%
TGTTTACCATTAACCATAAC+AGG - Chr4:89842151-89842170 None:intergenic 30.0%
TTAAAGTAGAGAGCAAATTC+TGG + Chr4:89840633-89840652 MsG0480023787.01.T01:five_prime_UTR 30.0%
TTTACTCAACCAAATACATG+TGG + Chr4:89844471-89844490 MsG0480023787.01.T01:intron 30.0%
TTTCCAATGAGAAAAATGAG+AGG - Chr4:89845838-89845857 None:intergenic 30.0%
! AATTAACCTGGAAGTTTTTC+TGG - Chr4:89841704-89841723 None:intergenic 30.0%
! ACTCATCGTTAAACTTTTTG+AGG + Chr4:89843859-89843878 MsG0480023787.01.T01:intron 30.0%
! ATTTTCTTTTCTTAGCTAGG+TGG - Chr4:89843230-89843249 None:intergenic 30.0%
! CATTCTAATCATGATGATGA+TGG - Chr4:89845642-89845661 None:intergenic 30.0%
! CTATCATTATAGGTTGGAAT+AGG + Chr4:89843324-89843343 MsG0480023787.01.T01:intron 30.0%
! TTAGCTATTTCACACAAGAA+AGG + Chr4:89845272-89845291 MsG0480023787.01.T01:intron 30.0%
! TTTTCTTTTCTTAGCTAGGT+GGG - Chr4:89843229-89843248 None:intergenic 30.0%
!! AAGTCACCTAACTTTGATTT+TGG + Chr4:89841953-89841972 MsG0480023787.01.T01:intron 30.0%
!! ACAGTTTCATGCTTGTTATT+TGG - Chr4:89844641-89844660 None:intergenic 30.0%
!! CACCGCAAAATTAATTTGTA+TGG + Chr4:89843150-89843169 MsG0480023787.01.T01:intron 30.0%
!! CTTAACTTGGTGCAAATTAA+TGG + Chr4:89844513-89844532 MsG0480023787.01.T01:intron 30.0%
!! GATTTTGGCAATGAATTTTC+AGG + Chr4:89841968-89841987 MsG0480023787.01.T01:intron 30.0%
!! TCATGTATTTTTGCATTCCT+TGG + Chr4:89845335-89845354 MsG0480023787.01.T01:intron 30.0%
!! TTTAAGGTGTTGAATATCCA+AGG - Chr4:89842546-89842565 None:intergenic 30.0%
!!! ATGATTACTTTGGCTTTTGT+TGG - Chr4:89845756-89845775 None:intergenic 30.0%
!!! CATCATAGCTTTTTCGAAAT+GGG - Chr4:89842589-89842608 None:intergenic 30.0%
!!! GCTCTTTTTTCTTTCTTTTC+CGG + Chr4:89845796-89845815 MsG0480023787.01.T01:three_prime_UTR 30.0%
!!! TCATCATAGCTTTTTCGAAA+TGG - Chr4:89842590-89842609 None:intergenic 30.0%
!!! TTTTGGTTCAACATATTGAG+TGG - Chr4:89844540-89844559 None:intergenic 30.0%
AAAACCCGAGAAGACAAATT+GGG + Chr4:89842222-89842241 MsG0480023787.01.T01:CDS 35.0%
ACAATGCAATGGAAATTGAC+TGG - Chr4:89845420-89845439 None:intergenic 35.0%
AGAAAAGAGGTCTCTTAACT+TGG + Chr4:89844500-89844519 MsG0480023787.01.T01:intron 35.0%
AGAATTGTCATCAAGGATGA+TGG - Chr4:89843597-89843616 None:intergenic 35.0%
AGCCGAAATGATCAGATTTA+AGG - Chr4:89842562-89842581 None:intergenic 35.0%
AGGATGGATGATGATTACTT+TGG - Chr4:89845766-89845785 None:intergenic 35.0%
ATCAATGGAAGAAGAGATAG+TGG + Chr4:89842419-89842438 MsG0480023787.01.T01:CDS 35.0%
ATCTTCATTACACTTCTCAC+AGG + Chr4:89845537-89845556 MsG0480023787.01.T01:intron 35.0%
CAACAACATCATAAACTAGG+TGG + Chr4:89844781-89844800 MsG0480023787.01.T01:CDS 35.0%
CAACATGAAGAAGAGAAAGA+AGG + Chr4:89842268-89842287 MsG0480023787.01.T01:intron 35.0%
CAGCAACAACATCATAAACT+AGG + Chr4:89844778-89844797 MsG0480023787.01.T01:CDS 35.0%
CATAGCATTTGATTGGAACA+TGG + Chr4:89842921-89842940 MsG0480023787.01.T01:intron 35.0%
CATGGTAAGAATTGTCATCA+AGG - Chr4:89843604-89843623 None:intergenic 35.0%
CATGTTCTTTGACTCAACTT+TGG - Chr4:89841609-89841628 None:intergenic 35.0%
CTAGTATGCAGTTACTTACA+AGG - Chr4:89840776-89840795 None:intergenic 35.0%
GGTTGAAATACTCTTCTTAC+TGG + Chr4:89845593-89845612 MsG0480023787.01.T01:CDS 35.0%
GGTTTAGAGGAAGTCATTAT+GGG + Chr4:89844820-89844839 MsG0480023787.01.T01:CDS 35.0%
GTACACAGAAAACAATGCAA+TGG - Chr4:89845431-89845450 None:intergenic 35.0%
GTCTCACATCAAGTATATTG+AGG - Chr4:89844231-89844250 None:intergenic 35.0%
GTTTAGAGGAAGTCATTATG+GGG + Chr4:89844821-89844840 MsG0480023787.01.T01:CDS 35.0%
TATCGTCATCGTTGATATTG+TGG + Chr4:89844196-89844215 MsG0480023787.01.T01:intron 35.0%
TCGCTAGGAAAAAACTATAG+CGG + Chr4:89843791-89843810 MsG0480023787.01.T01:intron 35.0%
TCTCACTTTCCACATGTATT+TGG - Chr4:89844483-89844502 None:intergenic 35.0%
TCTCATAATAATGCCCACTA+GGG + Chr4:89844925-89844944 MsG0480023787.01.T01:intron 35.0%
TGATCTCATAGATTCTAAGC+TGG + Chr4:89841203-89841222 MsG0480023787.01.T01:CDS 35.0%
TGATTGTCAATTGTCATCGA+TGG + Chr4:89844673-89844692 MsG0480023787.01.T01:intron 35.0%
TGGTTTAGAGGAAGTCATTA+TGG + Chr4:89844819-89844838 MsG0480023787.01.T01:CDS 35.0%
TGTGGACACAAATTTGATCA+AGG + Chr4:89841264-89841283 MsG0480023787.01.T01:CDS 35.0%
TTCAATGGAACTAACAGGAT+TGG + Chr4:89841519-89841538 MsG0480023787.01.T01:intron 35.0%
TTCTCATAATAATGCCCACT+AGG + Chr4:89844924-89844943 MsG0480023787.01.T01:intron 35.0%
! ACTATGATGACGTGGAAAAA+AGG + Chr4:89845393-89845412 MsG0480023787.01.T01:intron 35.0%
! ACTCACGGTTAAACATTTTG+AGG - Chr4:89843978-89843997 None:intergenic 35.0%
! CTTTTCCGGTTTATGAACTT+CGG + Chr4:89845810-89845829 MsG0480023787.01.T01:three_prime_UTR 35.0%
! CTTTTTCCATAGACCATCAA+AGG + Chr4:89842018-89842037 MsG0480023787.01.T01:CDS 35.0%
! TATATGCCTTTGATGGTCTA+TGG - Chr4:89842027-89842046 None:intergenic 35.0%
! TTATAGGTTGGAATAGGAGA+AGG + Chr4:89843330-89843349 MsG0480023787.01.T01:intron 35.0%
! TTTTGTTGGAAAGTGAGTTG+AGG - Chr4:89845742-89845761 None:intergenic 35.0%
!! AACTAAGGTGGCTTTAAAGA+AGG - Chr4:89840668-89840687 None:intergenic 35.0%
!! ACTGACACTGATTTATCATC+TGG - Chr4:89843182-89843201 None:intergenic 35.0%
!! AGCTTCTTGTTGGTTTCTAA+TGG - Chr4:89845569-89845588 None:intergenic 35.0%
!! GCATTTGTGAAGCTTGTTAA+AGG - Chr4:89842524-89842543 None:intergenic 35.0%
!! TGAAGCTTGTTAAAGGACTA+GGG - Chr4:89842517-89842536 None:intergenic 35.0%
AACAAGCTTCACAAATGCCT+TGG + Chr4:89842526-89842545 MsG0480023787.01.T01:CDS 40.0%
AACGTCGTCTGATATCAAAG+AGG + Chr4:89844852-89844871 MsG0480023787.01.T01:CDS 40.0%
AAGTGGAAGTTCTTCTTCCA+AGG + Chr4:89842442-89842461 MsG0480023787.01.T01:CDS 40.0%
ACAACAATTGGTGAAGGAAG+TGG + Chr4:89842377-89842396 MsG0480023787.01.T01:CDS 40.0%
ACAAGAGAAATGCAAGCATC+AGG + Chr4:89843360-89843379 MsG0480023787.01.T01:intron 40.0%
ACAATGAACTGTGCAGGATA+AGG - Chr4:89840806-89840825 None:intergenic 40.0%
ACCAGACCTGTTATGGTTAA+TGG + Chr4:89842142-89842161 MsG0480023787.01.T01:CDS 40.0%
ACCATTAACCATAACAGGTC+TGG - Chr4:89842146-89842165 None:intergenic 40.0%
ACGCAGCTTTCCATATAAGT+AGG + Chr4:89843516-89843535 MsG0480023787.01.T01:intron 40.0%
ATACAACAGGAACACGAAAG+AGG + Chr4:89842044-89842063 MsG0480023787.01.T01:CDS 40.0%
ATCACCCAATTTGTCTTCTC+GGG - Chr4:89842229-89842248 None:intergenic 40.0%
ATCCATACAATGAACTGTGC+AGG - Chr4:89840812-89840831 None:intergenic 40.0%
ATCCTGCACAGTTCATTGTA+TGG + Chr4:89840807-89840826 MsG0480023787.01.T01:intron 40.0%
CAAATTTGATCAAGGCAAGC+CGG + Chr4:89841272-89841291 MsG0480023787.01.T01:CDS 40.0%
CAACATCATAAACTAGGTGG+TGG + Chr4:89844784-89844803 MsG0480023787.01.T01:CDS 40.0%
CACTAGGGAAAGAGAAAAGA+GGG + Chr4:89844940-89844959 MsG0480023787.01.T01:intron 40.0%
CATCACCCAATTTGTCTTCT+CGG - Chr4:89842230-89842249 None:intergenic 40.0%
CATGTGGAAAGTGAGAAAAG+AGG + Chr4:89844487-89844506 MsG0480023787.01.T01:intron 40.0%
CCTGTTGTATATGCCTTTGA+TGG - Chr4:89842034-89842053 None:intergenic 40.0%
CGCTAGGAAAAAACTATAGC+GGG + Chr4:89843792-89843811 MsG0480023787.01.T01:intron 40.0%
CTCACTATTGAAGGAGAAGA+TGG + Chr4:89841662-89841681 MsG0480023787.01.T01:CDS 40.0%
CTCTCTACTTTAACTGACTG+AGG - Chr4:89840626-89840645 None:intergenic 40.0%
CTGTTAGAATAAGGTTGAGG+TGG - Chr4:89840707-89840726 None:intergenic 40.0%
CTTCTTCATGTTGTCCAAGA+TGG - Chr4:89842261-89842280 None:intergenic 40.0%
CTTGTTCTCTACACCAACTT+CGG + Chr4:89842190-89842209 MsG0480023787.01.T01:CDS 40.0%
GAAAACCCGAGAAGACAAAT+TGG + Chr4:89842221-89842240 MsG0480023787.01.T01:CDS 40.0%
GAAACAAGATGGCACAAAAC+TGG + Chr4:89842115-89842134 MsG0480023787.01.T01:CDS 40.0%
GAAACACTAACTGTGTGCAA+CGG + Chr4:89845854-89845873 MsG0480023787.01.T01:three_prime_UTR 40.0%
GATGAAATGTCTGCTGTTGT+TGG + Chr4:89842488-89842507 MsG0480023787.01.T01:CDS 40.0%
GATTGGAAGGCCTACTTATA+TGG - Chr4:89843529-89843548 None:intergenic 40.0%
GCAACAACAACAATTGGTGA+AGG + Chr4:89842371-89842390 MsG0480023787.01.T01:CDS 40.0%
GGAGCATGATTGTTGAAACA+TGG - Chr4:89843622-89843641 None:intergenic 40.0%
GTAACTATGTATGTCGGTGT+CGG - Chr4:89842689-89842708 None:intergenic 40.0%
GTGATGCATCAATACCATCT+TGG + Chr4:89842244-89842263 MsG0480023787.01.T01:intron 40.0%
GTGATTATGCTAAGTGGTGT+TGG + Chr4:89841064-89841083 MsG0480023787.01.T01:five_prime_UTR 40.0%
TACTTTAACTGACTGAGGCA+AGG - Chr4:89840621-89840640 None:intergenic 40.0%
TCAGACCAATTACACTGTCT+TGG - Chr4:89842329-89842348 None:intergenic 40.0%
TCCTTGTAAGTCACACTCTT+CGG - Chr4:89842083-89842102 None:intergenic 40.0%
TTGAGGGTGATTATGCTAAG+TGG + Chr4:89841058-89841077 MsG0480023787.01.T01:five_prime_UTR 40.0%
! AACCTGGAAGTTTTTCTGGA+TGG - Chr4:89841700-89841719 None:intergenic 40.0%
! ACCTGGAAGTTTTTCTGGAT+GGG - Chr4:89841699-89841718 None:intergenic 40.0%
! CCATCAAAGGCATATACAAC+AGG + Chr4:89842031-89842050 MsG0480023787.01.T01:CDS 40.0%
! CTCTTTTCTCTTTCCCTAGT+GGG - Chr4:89844941-89844960 None:intergenic 40.0%
! GATGATGGTTGTTGTCATGA+GGG - Chr4:89845627-89845646 None:intergenic 40.0%
! TGTGACTTACAAGGAAGTAC+AGG + Chr4:89842088-89842107 MsG0480023787.01.T01:CDS 40.0%
! TTGGAAAGTGAGTTGAGGTA+TGG - Chr4:89845737-89845756 None:intergenic 40.0%
! TTTTCGATTCTTGCCGAAGT+TGG - Chr4:89842206-89842225 None:intergenic 40.0%
!! AGCTTTTGACTATGATGACG+TGG + Chr4:89845385-89845404 MsG0480023787.01.T01:intron 40.0%
!! ATCATAAACTAGGTGGTGGA+AGG + Chr4:89844788-89844807 MsG0480023787.01.T01:CDS 40.0%
!! CACTGATTTATCATCTGGTC+AGG - Chr4:89843177-89843196 None:intergenic 40.0%
!! GCTGCGAACCTTTAAAACTA+TGG + Chr4:89841323-89841342 MsG0480023787.01.T01:intron 40.0%
!! GTGAAGCTTGTTAAAGGACT+AGG - Chr4:89842518-89842537 None:intergenic 40.0%
!! GTGCCTCTCATTTTTCTCAT+TGG + Chr4:89845832-89845851 MsG0480023787.01.T01:three_prime_UTR 40.0%
!! TGATGATGGTTGTTGTCATG+AGG - Chr4:89845628-89845647 None:intergenic 40.0%
!! TTTTCAGGAGTGACAAGAGA+TGG + Chr4:89841983-89842002 MsG0480023787.01.T01:intron 40.0%
ACAATTGGTGAAGGAAGTGG+TGG + Chr4:89842380-89842399 MsG0480023787.01.T01:CDS 45.0%
ACCCATCCAGAAAAACTTCC+AGG + Chr4:89841695-89841714 MsG0480023787.01.T01:CDS 45.0%
ACCGCGACTATTATACGTAC+CGG - Chr4:89841294-89841313 None:intergenic 45.0%
AGAGAAATGCAAGCATCAGG+AGG + Chr4:89843363-89843382 MsG0480023787.01.T01:intron 45.0%
AGTAGCTAGCTAACCAACGT+TGG + Chr4:89843199-89843218 MsG0480023787.01.T01:intron 45.0%
AGTGTTTGGATCCACACAAC+TGG - Chr4:89841236-89841255 None:intergenic 45.0%
CAAATTTGTGTCCACAGCGA+GGG - Chr4:89841260-89841279 None:intergenic 45.0%
CACAGCCAAGACAGTGTAAT+TGG + Chr4:89842321-89842340 MsG0480023787.01.T01:CDS 45.0%
CCACTAGGGAAAGAGAAAAG+AGG + Chr4:89844939-89844958 MsG0480023787.01.T01:intron 45.0%
GAAACCAACAAGAAGCTGAG+TGG + Chr4:89845572-89845591 MsG0480023787.01.T01:CDS 45.0%
GGATCAAATTTCACTCCTGC+TGG - Chr4:89841554-89841573 None:intergenic 45.0%
GTACAGGAGGAGAAACAAGA+TGG + Chr4:89842104-89842123 MsG0480023787.01.T01:CDS 45.0%
TCAAATTTGTGTCCACAGCG+AGG - Chr4:89841261-89841280 None:intergenic 45.0%
TCAACCACTCAGCTTCTTGT+TGG - Chr4:89845579-89845598 None:intergenic 45.0%
TGATGGTAGATGTGTGATGG+AGG - Chr4:89843580-89843599 None:intergenic 45.0%
TGGTAAGACCAGACCTGTTA+TGG + Chr4:89842135-89842154 MsG0480023787.01.T01:CDS 45.0%
! ACCGAAGAGTGTGACTTACA+AGG + Chr4:89842079-89842098 MsG0480023787.01.T01:CDS 45.0%
! ATAGTGGAGATGGGATTGGA+AGG - Chr4:89843542-89843561 None:intergenic 45.0%
! ATGGTAGATGTGTGATGGAG+GGG - Chr4:89843578-89843597 None:intergenic 45.0%
! CCTCTTTTCTCTTTCCCTAG+TGG - Chr4:89844942-89844961 None:intergenic 45.0%
! GACTTACAAGGAAGTACAGG+AGG + Chr4:89842091-89842110 MsG0480023787.01.T01:CDS 45.0%
! GATGGTAGATGTGTGATGGA+GGG - Chr4:89843579-89843598 None:intergenic 45.0%
! GGATGATGGTAGATGTGTGA+TGG - Chr4:89843583-89843602 None:intergenic 45.0%
! GTGTGCAACGGAACAAGTTT+TGG + Chr4:89845866-89845885 MsG0480023787.01.T01:three_prime_UTR 45.0%
!! AGGCACCGAAGTTCATAAAC+CGG - Chr4:89845818-89845837 None:intergenic 45.0%
!! GATGATAGTGGAGATGGGAT+TGG - Chr4:89843546-89843565 None:intergenic 45.0%
!! GGAAGAAGAGATAGTGGAAG+TGG + Chr4:89842425-89842444 MsG0480023787.01.T01:CDS 45.0%
!! GGAGAGATGATAGTGGAGAT+GGG - Chr4:89843551-89843570 None:intergenic 45.0%
!! TGGAACTAACAGGATTGGCT+AGG + Chr4:89841524-89841543 MsG0480023787.01.T01:intron 45.0%
!! TGGAGAGATGATAGTGGAGA+TGG - Chr4:89843552-89843571 None:intergenic 45.0%
!!! AATTATTAAAGTTTTATTAA+TGG + Chr4:89844000-89844019 MsG0480023787.01.T01:intron 5.0%
!!! CTTTTTTATAAATAAAAATT+GGG + Chr4:89844137-89844156 MsG0480023787.01.T01:intron 5.0%
!!! TCTTTTTTATAAATAAAAAT+TGG + Chr4:89844136-89844155 MsG0480023787.01.T01:intron 5.0%
!!! TTTTTTATAAATAAAAATTG+GGG + Chr4:89844138-89844157 MsG0480023787.01.T01:intron 5.0%
ACAACTGCGATTGCATCGCT+AGG + Chr4:89843776-89843795 MsG0480023787.01.T01:intron 50.0%
ACGTATAATAGTCGCGGTCG+CGG + Chr4:89841296-89841315 MsG0480023787.01.T01:intron 50.0%
ATCAGGAGGCTCATGTGATC+AGG + Chr4:89843377-89843396 MsG0480023787.01.T01:intron 50.0%
CTAGGTGGGTAAACCAACGT+TGG - Chr4:89843215-89843234 None:intergenic 50.0%
CTGCGTTTGCACTAATCTGC+TGG - Chr4:89843502-89843521 None:intergenic 50.0%
GCCGGTACGTATAATAGTCG+CGG + Chr4:89841290-89841309 MsG0480023787.01.T01:intron 50.0%
TTGTTGTCATGAGGGTCGAC+TGG - Chr4:89845619-89845638 None:intergenic 50.0%
! AAGGTCTGCGTCTGGTTTAG+AGG + Chr4:89844807-89844826 MsG0480023787.01.T01:CDS 50.0%
!! ATGTATGTCGGTGTCGGACA+TGG - Chr4:89842683-89842702 None:intergenic 50.0%
AGGAGGCTCATGTGATCAGG+AGG + Chr4:89843380-89843399 MsG0480023787.01.T01:intron 55.0%
GGGAGGTGGAGAGATGATAG+TGG - Chr4:89843558-89843577 None:intergenic 55.0%
! GATTGGCTAGGTCTACCAGC+AGG + Chr4:89841536-89841555 MsG0480023787.01.T01:CDS 55.0%
! GTAGATGTGTGATGGAGGGG+AGG - Chr4:89843575-89843594 None:intergenic 55.0%
!! CTGGAAGAGCACCAGTTGTG+TGG + Chr4:89841222-89841241 MsG0480023787.01.T01:CDS 55.0%
CTGCTGCTGTTGCTGCCATG+TGG - Chr4:89844761-89844780 None:intergenic 60.0%
TCCAAACACTGCCCTCGCTG+TGG + Chr4:89841246-89841265 MsG0480023787.01.T01:CDS 60.0%
TCCACAGCGAGGGCAGTGTT+TGG - Chr4:89841250-89841269 None:intergenic 60.0%
! GATGTGTGATGGAGGGGAGG+TGG - Chr4:89843572-89843591 None:intergenic 60.0%
!! GGTGGTGGAAGGTCTGCGTC+TGG + Chr4:89844799-89844818 MsG0480023787.01.T01:CDS 65.0%
Chromosome Type Strat End Strand Name
Chr4 gene 89840571 89845928 89840571 ID=MsG0480023787.01;Name=MsG0480023787.01
Chr4 mRNA 89840571 89845928 89840571 ID=MsG0480023787.01.T01;Parent=MsG0480023787.01;Name=MsG0480023787.01.T01;_AED=0.34;_eAED=0.34;_QI=404|0.66|0.71|1|0.83|0.71|7|271|351
Chr4 exon 89840571 89840823 89840571 ID=MsG0480023787.01.T01:exon:12529;Parent=MsG0480023787.01.T01
Chr4 exon 89841017 89841293 89841017 ID=MsG0480023787.01.T01:exon:12530;Parent=MsG0480023787.01.T01
Chr4 exon 89841536 89841716 89841536 ID=MsG0480023787.01.T01:exon:12531;Parent=MsG0480023787.01.T01
Chr4 exon 89841990 89842243 89841990 ID=MsG0480023787.01.T01:exon:12532;Parent=MsG0480023787.01.T01
Chr4 exon 89842320 89842610 89842320 ID=MsG0480023787.01.T01:exon:12533;Parent=MsG0480023787.01.T01
Chr4 exon 89844769 89844873 89844769 ID=MsG0480023787.01.T01:exon:12534;Parent=MsG0480023787.01.T01
Chr4 exon 89845559 89845928 89845559 ID=MsG0480023787.01.T01:exon:12535;Parent=MsG0480023787.01.T01
Chr4 five_prime_UTR 89840571 89840823 89840571 ID=MsG0480023787.01.T01:five_prime_utr;Parent=MsG0480023787.01.T01
Chr4 five_prime_UTR 89841017 89841167 89841017 ID=MsG0480023787.01.T01:five_prime_utr;Parent=MsG0480023787.01.T01
Chr4 CDS 89841168 89841293 89841168 ID=MsG0480023787.01.T01:cds;Parent=MsG0480023787.01.T01
Chr4 CDS 89841536 89841716 89841536 ID=MsG0480023787.01.T01:cds;Parent=MsG0480023787.01.T01
Chr4 CDS 89841990 89842243 89841990 ID=MsG0480023787.01.T01:cds;Parent=MsG0480023787.01.T01
Chr4 CDS 89842320 89842610 89842320 ID=MsG0480023787.01.T01:cds;Parent=MsG0480023787.01.T01
Chr4 CDS 89844769 89844873 89844769 ID=MsG0480023787.01.T01:cds;Parent=MsG0480023787.01.T01
Chr4 CDS 89845559 89845657 89845559 ID=MsG0480023787.01.T01:cds;Parent=MsG0480023787.01.T01
Chr4 three_prime_UTR 89845658 89845928 89845658 ID=MsG0480023787.01.T01:three_prime_utr;Parent=MsG0480023787.01.T01
Gene Sequence

>MsG0480023787.01.T01

ATGATGAATAATAAGATGAGCAACGTTAGTAGCTCTGATCTCATAGATTCTAAGCTGGAAGAGCACCAGTTGTGTGGATCCAAACACTGCCCTCGCTGTGGACACAAATTTGATCAAGGCAAGCCGGATTGGCTAGGTCTACCAGCAGGAGTGAAATTTGATCCAACAGATCAAGAATTGATTGAACATCTTGAAGCCAAAGTTGAGTCAAAGAACATGCAGAAATCACACCCTTTGATTGATGAATTCATTCTCACTATTGAAGGAGAAGATGGAATTTGTTACACCCATCCAGAAAAACTTCCAGGAGTGACAAGAGATGGATTAAGCAGACACTTTTTCCATAGACCATCAAAGGCATATACAACAGGAACACGAAAGAGGAGAAAGATTCAAACCGAAGAGTGTGACTTACAAGGAAGTACAGGAGGAGAAACAAGATGGCACAAAACTGGTAAGACCAGACCTGTTATGGTTAATGGTAAACAAAAAGGTTGCAAGAAAATTCTTGTTCTCTACACCAACTTCGGCAAGAATCGAAAACCCGAGAAGACAAATTGGACACAGCCAAGACAGTGTAATTGGTCTGATAATAATCAAAGAATAATTAGTGCAACAACAACAATTGGTGAAGGAAGTGGTGGAGAACCTAATTATAATATCAATGGAAGAAGAGATAGTGGAAGTGGAAGTTCTTCTTCCAAGGAAATTGTTACTCAGATTCATAGAGATGAAATGTCTGCTGTTGTTGGTGTCCCTAGTCCTTTAACAAGCTTCACAAATGCCTTGGATATTCAACACCTTAAATCTGATCATTTCGGCTTCAACCCATTTCGAAAAAGCTATGATGAGCAACAGCAGCAGCAACAACATCATAAACTAGGTGGTGGAAGGTCTGCGTCTGGTTTAGAGGAAGTCATTATGGGGTGCACTTCAACGTCGTCTGATATCAAAGAGGAGTCATCCATTAGAAACCAACAAGAAGCTGAGTGGTTGAAATACTCTTCTTACTGGCCAGTCGACCCTCATGACAACAACCATCATCATCATGATTAG
Protein sequence

>MsG0480023787.01.T01

MMNNKMSNVSSSDLIDSKLEEHQLCGSKHCPRCGHKFDQGKPDWLGLPAGVKFDPTDQELIEHLEAKVESKNMQKSHPLIDEFILTIEGEDGICYTHPEKLPGVTRDGLSRHFFHRPSKAYTTGTRKRRKIQTEECDLQGSTGGETRWHKTGKTRPVMVNGKQKGCKKILVLYTNFGKNRKPEKTNWTQPRQCNWSDNNQRIISATTTIGEGSGGEPNYNINGRRDSGSGSSSSKEIVTQIHRDEMSAVVGVPSPLTSFTNALDIQHLKSDHFGFNPFRKSYDEQQQQQQHHKLGGGRSASGLEEVIMGCTSTSSDIKEESSIRNQQEAEWLKYSSYWPVDPHDNNHHHHD*