Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580024071.01.T01 | XP_024636348.1 | 96.761 | 247 | 8 | 0 | 1 | 247 | 1 | 247 | 1.46E-172 | 504 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580024071.01.T01 | Q9SZL8 | 36.207 | 232 | 142 | 4 | 20 | 247 | 76 | 305 | 2.30E-37 | 142 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580024071.01.T01 | A0A072UB45 | 74.900 | 251 | 59 | 1 | 1 | 247 | 1 | 251 | 8.96e-139 | 402 |
| Gene ID | Type | Classification |
|---|---|---|
| MsG0580024071.01.T01 | TF | FAR1 |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580024071.01.T01 | MTR_6g051425 | 74.900 | 251 | 59 | 1 | 1 | 247 | 1 | 251 | 2.27e-142 | 402 |
| MsG0580024071.01.T01 | MTR_2g039370 | 83.784 | 74 | 12 | 0 | 49 | 122 | 98 | 171 | 4.52e-38 | 135 |
| MsG0580024071.01.T01 | MTR_3g465760 | 72.464 | 69 | 15 | 1 | 41 | 105 | 2 | 70 | 6.40e-28 | 102 |
| MsG0580024071.01.T01 | MTR_0558s0020 | 28.033 | 239 | 153 | 4 | 28 | 247 | 47 | 285 | 8.35e-28 | 108 |
| MsG0580024071.01.T01 | MTR_1g070355 | 29.204 | 226 | 150 | 6 | 27 | 247 | 84 | 304 | 1.38e-25 | 105 |
| MsG0580024071.01.T01 | MTR_8g446020 | 28.922 | 204 | 133 | 2 | 56 | 247 | 42 | 245 | 4.79e-25 | 99.8 |
| MsG0580024071.01.T01 | MTR_7g446520 | 30.120 | 249 | 148 | 4 | 2 | 247 | 77 | 302 | 5.00e-25 | 101 |
| MsG0580024071.01.T01 | MTR_4g035820 | 30.290 | 241 | 150 | 7 | 18 | 247 | 76 | 309 | 1.84e-24 | 102 |
| MsG0580024071.01.T01 | MTR_7g446480 | 34.932 | 146 | 95 | 0 | 101 | 246 | 149 | 294 | 3.72e-23 | 95.9 |
| MsG0580024071.01.T01 | MTR_7g446510 | 32.778 | 180 | 120 | 1 | 67 | 246 | 131 | 309 | 7.68e-23 | 95.5 |
| MsG0580024071.01.T01 | MTR_6g090505 | 29.000 | 200 | 126 | 3 | 64 | 247 | 21 | 220 | 3.86e-22 | 94.0 |
| MsG0580024071.01.T01 | MTR_1g013060 | 27.536 | 207 | 140 | 4 | 19 | 218 | 26 | 229 | 1.00e-21 | 90.5 |
| MsG0580024071.01.T01 | MTR_5g076070 | 27.232 | 224 | 151 | 5 | 29 | 246 | 65 | 282 | 4.63e-21 | 89.7 |
| MsG0580024071.01.T01 | MTR_1g083640 | 26.201 | 229 | 146 | 6 | 22 | 229 | 56 | 282 | 1.34e-20 | 88.6 |
| MsG0580024071.01.T01 | MTR_3g450850 | 25.620 | 242 | 166 | 6 | 17 | 246 | 47 | 286 | 4.96e-17 | 79.7 |
| MsG0580024071.01.T01 | MTR_0402s0040 | 30.409 | 171 | 103 | 6 | 29 | 191 | 38 | 200 | 4.13e-16 | 77.4 |
| MsG0580024071.01.T01 | MTR_0337s0040 | 28.472 | 144 | 102 | 1 | 83 | 225 | 81 | 224 | 1.23e-15 | 73.9 |
| MsG0580024071.01.T01 | MTR_5g039760 | 26.263 | 198 | 112 | 5 | 19 | 211 | 12 | 180 | 2.67e-13 | 67.0 |
| MsG0580024071.01.T01 | MTR_2g098880 | 31.405 | 121 | 73 | 3 | 7 | 121 | 51 | 167 | 3.68e-13 | 67.4 |
| MsG0580024071.01.T01 | MTR_2g098880 | 31.405 | 121 | 73 | 3 | 7 | 121 | 63 | 179 | 3.88e-13 | 67.8 |
| MsG0580024071.01.T01 | MTR_2g098920 | 30.097 | 103 | 71 | 1 | 18 | 120 | 81 | 182 | 1.97e-12 | 65.5 |
| MsG0580024071.01.T01 | MTR_1g008290 | 26.316 | 114 | 83 | 1 | 101 | 214 | 32 | 144 | 4.89e-12 | 62.4 |
| MsG0580024071.01.T01 | MTR_2g014100 | 24.873 | 197 | 129 | 4 | 15 | 192 | 42 | 238 | 7.28e-12 | 63.9 |
| MsG0580024071.01.T01 | MTR_4g067290 | 27.928 | 111 | 79 | 1 | 14 | 124 | 53 | 162 | 6.10e-11 | 60.8 |
| MsG0580024071.01.T01 | MTR_4g067290 | 27.928 | 111 | 79 | 1 | 14 | 124 | 73 | 182 | 6.55e-11 | 61.2 |
| MsG0580024071.01.T01 | MTR_4g067290 | 27.928 | 111 | 79 | 1 | 14 | 124 | 53 | 162 | 6.87e-11 | 60.8 |
| MsG0580024071.01.T01 | MTR_4g067290 | 27.928 | 111 | 79 | 1 | 14 | 124 | 73 | 182 | 7.02e-11 | 61.2 |
| MsG0580024071.01.T01 | MTR_4g067290 | 27.928 | 111 | 79 | 1 | 14 | 124 | 71 | 180 | 7.10e-11 | 61.2 |
| MsG0580024071.01.T01 | MTR_4g067290 | 27.928 | 111 | 79 | 1 | 14 | 124 | 113 | 222 | 7.24e-11 | 61.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580024071.01.T01 | AT4G38180 | 36.207 | 232 | 142 | 4 | 20 | 247 | 76 | 305 | 2.34e-38 | 142 |
| MsG0580024071.01.T01 | AT4G15090 | 30.901 | 233 | 143 | 5 | 24 | 247 | 58 | 281 | 1.94e-26 | 107 |
| MsG0580024071.01.T01 | AT4G15090 | 30.901 | 233 | 143 | 5 | 24 | 247 | 58 | 281 | 1.94e-26 | 107 |
| MsG0580024071.01.T01 | AT4G15090 | 30.901 | 233 | 143 | 5 | 24 | 247 | 58 | 281 | 1.94e-26 | 107 |
| MsG0580024071.01.T01 | AT4G15090 | 30.901 | 233 | 143 | 5 | 24 | 247 | 58 | 281 | 1.94e-26 | 107 |
| MsG0580024071.01.T01 | AT4G15090 | 30.901 | 233 | 143 | 5 | 24 | 247 | 58 | 281 | 1.94e-26 | 107 |
| MsG0580024071.01.T01 | AT1G10240 | 30.085 | 236 | 158 | 4 | 18 | 247 | 49 | 283 | 3.57e-23 | 98.6 |
| MsG0580024071.01.T01 | AT1G10240 | 30.085 | 236 | 158 | 4 | 18 | 247 | 49 | 283 | 3.57e-23 | 98.6 |
| MsG0580024071.01.T01 | AT1G76320 | 30.942 | 223 | 141 | 5 | 27 | 247 | 7 | 218 | 1.17e-22 | 97.1 |
| MsG0580024071.01.T01 | AT1G76320 | 30.942 | 223 | 141 | 5 | 27 | 247 | 7 | 218 | 1.19e-22 | 97.1 |
| MsG0580024071.01.T01 | AT1G76320 | 30.942 | 223 | 141 | 5 | 27 | 247 | 7 | 218 | 1.20e-22 | 97.1 |
| MsG0580024071.01.T01 | AT1G76320 | 30.942 | 223 | 141 | 5 | 27 | 247 | 7 | 218 | 1.20e-22 | 97.1 |
| MsG0580024071.01.T01 | AT5G28530 | 28.571 | 245 | 158 | 4 | 18 | 247 | 56 | 298 | 2.69e-21 | 92.8 |
| MsG0580024071.01.T01 | AT5G28530 | 28.571 | 245 | 158 | 4 | 18 | 247 | 56 | 298 | 2.69e-21 | 92.8 |
| MsG0580024071.01.T01 | AT5G28530 | 28.571 | 245 | 158 | 4 | 18 | 247 | 56 | 298 | 2.72e-21 | 92.8 |
| MsG0580024071.01.T01 | AT2G27110 | 28.205 | 234 | 141 | 5 | 13 | 246 | 45 | 251 | 6.20e-21 | 92.0 |
| MsG0580024071.01.T01 | AT2G27110 | 28.205 | 234 | 141 | 5 | 13 | 246 | 45 | 251 | 6.20e-21 | 92.0 |
| MsG0580024071.01.T01 | AT3G06250 | 28.017 | 232 | 128 | 4 | 16 | 247 | 189 | 381 | 1.32e-20 | 90.9 |
| MsG0580024071.01.T01 | AT3G06250 | 28.017 | 232 | 128 | 4 | 16 | 247 | 189 | 381 | 1.32e-20 | 90.9 |
| MsG0580024071.01.T01 | AT3G06250 | 28.017 | 232 | 128 | 4 | 16 | 247 | 189 | 381 | 1.32e-20 | 90.9 |
| MsG0580024071.01.T01 | AT4G19990 | 26.394 | 269 | 135 | 9 | 1 | 247 | 1 | 228 | 3.81e-20 | 89.7 |
| MsG0580024071.01.T01 | AT4G19990 | 26.394 | 269 | 135 | 9 | 1 | 247 | 1 | 228 | 3.81e-20 | 89.7 |
| MsG0580024071.01.T01 | AT4G19990 | 26.394 | 269 | 135 | 9 | 1 | 247 | 1 | 228 | 4.28e-20 | 89.4 |
| MsG0580024071.01.T01 | AT4G19990 | 26.394 | 269 | 135 | 9 | 1 | 247 | 1 | 228 | 4.28e-20 | 89.4 |
| MsG0580024071.01.T01 | AT4G19990 | 26.394 | 269 | 135 | 9 | 1 | 247 | 1 | 228 | 4.61e-20 | 89.4 |
| MsG0580024071.01.T01 | AT1G52520 | 30.000 | 230 | 147 | 6 | 19 | 247 | 87 | 303 | 6.79e-20 | 89.0 |
| MsG0580024071.01.T01 | AT4G19990 | 26.415 | 265 | 132 | 9 | 5 | 247 | 19 | 242 | 9.72e-20 | 88.6 |
| MsG0580024071.01.T01 | AT4G19990 | 30.488 | 164 | 78 | 4 | 84 | 247 | 44 | 171 | 5.30e-17 | 80.5 |
| MsG0580024071.01.T01 | AT1G80010 | 27.426 | 237 | 156 | 6 | 20 | 247 | 98 | 327 | 6.07e-17 | 80.1 |
| MsG0580024071.01.T01 | AT3G22170 | 27.542 | 236 | 129 | 7 | 28 | 247 | 81 | 290 | 6.93e-16 | 77.0 |
| MsG0580024071.01.T01 | AT3G22170 | 27.542 | 236 | 129 | 7 | 28 | 247 | 81 | 290 | 6.93e-16 | 77.0 |
| MsG0580024071.01.T01 | AT5G28530 | 29.282 | 181 | 119 | 4 | 18 | 192 | 56 | 233 | 6.57e-13 | 68.2 |
| MsG0580024071.01.T01 | AT5G28530 | 29.282 | 181 | 119 | 4 | 18 | 192 | 56 | 233 | 6.65e-13 | 68.2 |
| MsG0580024071.01.T01 | AT3G59470 | 33.010 | 103 | 68 | 1 | 18 | 120 | 71 | 172 | 7.38e-13 | 66.6 |
| MsG0580024071.01.T01 | AT3G59470 | 33.010 | 103 | 68 | 1 | 18 | 120 | 71 | 172 | 7.38e-13 | 66.6 |
| MsG0580024071.01.T01 | AT3G59470 | 33.010 | 103 | 68 | 1 | 18 | 120 | 83 | 184 | 8.56e-13 | 66.6 |
| MsG0580024071.01.T01 | AT2G27110 | 46.429 | 56 | 30 | 0 | 191 | 246 | 51 | 106 | 4.04e-11 | 63.2 |
Find 45 sgRNAs with CRISPR-Local
Find 49 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACAAATATTTGGAATTATTT+AGG | 0.090273 | 5:+465880 | MsG0580024071.01.T01:CDS |
| GTATACGAGTTACAAATATT+TGG | 0.221426 | 5:+465869 | MsG0580024071.01.T01:CDS |
| CAAATATTTGGAATTATTTA+GGG | 0.245589 | 5:+465881 | MsG0580024071.01.T01:CDS |
| CTCGTTTGACTAATGTCTTT+TGG | 0.253639 | 5:+466082 | MsG0580024071.01.T01:CDS |
| ATTATTCTTAAACCCTTCTT+TGG | 0.257903 | 5:-465626 | None:intergenic |
| AAGTTGATTATGATTGCTTT+GGG | 0.313658 | 5:+466121 | MsG0580024071.01.T01:CDS |
| AAAGTTGATTATGATTGCTT+TGG | 0.341170 | 5:+466120 | MsG0580024071.01.T01:CDS |
| CATGCCTTCAAATCAGGATT+TGG | 0.352479 | 5:+465532 | MsG0580024071.01.T01:CDS |
| ATGTTAGCAAGGAAGGAGTT+TGG | 0.356508 | 5:+465719 | MsG0580024071.01.T01:CDS |
| ACGAAACCTCATAAAGTCTA+TGG | 0.362525 | 5:+465837 | MsG0580024071.01.T01:CDS |
| TACACCAAATCCTGATTTGA+AGG | 0.362762 | 5:-465536 | None:intergenic |
| GGGTTTAAGAATAATGAATA+TGG | 0.371754 | 5:+465634 | MsG0580024071.01.T01:CDS |
| CAAGCACATGCCTTCAAATC+AGG | 0.383509 | 5:+465526 | MsG0580024071.01.T01:CDS |
| AACAGTAAAACTCTTTAAAA+CGG | 0.389800 | 5:-465603 | None:intergenic |
| AATTCACCATAGACTTTATG+AGG | 0.389972 | 5:-465843 | None:intergenic |
| TCAGGATTTGGTGTAAGAAA+AGG | 0.407060 | 5:+465544 | MsG0580024071.01.T01:CDS |
| AAGTTGAAATTGATTGAAGC+TGG | 0.434164 | 5:+465973 | MsG0580024071.01.T01:CDS |
| TGTCAATCAGTTGAAATTGA+TGG | 0.438803 | 5:+465442 | MsG0580024071.01.T01:CDS |
| AGGTTTAATGTTAGCAAGGA+AGG | 0.442161 | 5:+465712 | MsG0580024071.01.T01:CDS |
| ATAAAGTCTATGGTGAATTC+TGG | 0.445432 | 5:+465847 | MsG0580024071.01.T01:CDS |
| ACAGTAAAACTCTTTAAAAC+GGG | 0.452807 | 5:-465602 | None:intergenic |
| GACATTTGACATATTTCTCA+TGG | 0.454279 | 5:-465812 | None:intergenic |
| AGTTGAAATTGATTGAAGCT+GGG | 0.466350 | 5:+465974 | MsG0580024071.01.T01:CDS |
| GTCGGTGGATATAACAATCT+TGG | 0.477476 | 5:+465910 | MsG0580024071.01.T01:CDS |
| CAGGATTTGGTGTAAGAAAA+GGG | 0.479534 | 5:+465545 | MsG0580024071.01.T01:CDS |
| CTTATGAAAGAGCTGATTCA+AGG | 0.480001 | 5:+465668 | MsG0580024071.01.T01:CDS |
| CGCAACAAATGTCTTTGCTC+AGG | 0.482031 | 5:-465787 | None:intergenic |
| TTGGAATTATTTAGGGGAAG+AGG | 0.485109 | 5:+465888 | MsG0580024071.01.T01:CDS |
| TTACAATGTACAGCTAGATC+AGG | 0.508809 | 5:+466056 | MsG0580024071.01.T01:CDS |
| AAGGACAAATTGCAAAGCTA+TGG | 0.528165 | 5:+465687 | MsG0580024071.01.T01:CDS |
| ATTATGATCTAATACAAACT+TGG | 0.563904 | 5:-465749 | None:intergenic |
| TAATGAATATGGAGGTGAAG+TGG | 0.572461 | 5:+465645 | MsG0580024071.01.T01:CDS |
| GGTGAGGTTTAATGTTAGCA+AGG | 0.579640 | 5:+465708 | MsG0580024071.01.T01:CDS |
| TGTACATTGTAATAGAACAT+AGG | 0.583397 | 5:-466045 | None:intergenic |
| TATTTAGGGGAAGAGGTCGG+TGG | 0.586341 | 5:+465895 | MsG0580024071.01.T01:CDS |
| AATTATTTAGGGGAAGAGGT+CGG | 0.592715 | 5:+465892 | MsG0580024071.01.T01:CDS |
| GTTGAAATTGATTGAAGCTG+GGG | 0.593382 | 5:+465975 | MsG0580024071.01.T01:CDS |
| TTTAAGAATAATGAATATGG+AGG | 0.604513 | 5:+465637 | MsG0580024071.01.T01:CDS |
| CTGAGCAAAGACATTTGTTG+CGG | 0.611498 | 5:+465788 | MsG0580024071.01.T01:CDS |
| ATTTGGTGTAAGAAAAGGGA+GGG | 0.620094 | 5:+465549 | MsG0580024071.01.T01:CDS |
| CAAATTGCAAAGCTATGGTG+AGG | 0.629755 | 5:+465692 | MsG0580024071.01.T01:CDS |
| AAATATTTGGAATTATTTAG+GGG | 0.632966 | 5:+465882 | MsG0580024071.01.T01:CDS |
| AACAAATGTCTTTGCTCAGG+AGG | 0.641459 | 5:-465784 | None:intergenic |
| GATTTGGTGTAAGAAAAGGG+AGG | 0.664580 | 5:+465548 | MsG0580024071.01.T01:CDS |
| AGTTGATTATGATTGCTTTG+GGG | 0.716100 | 5:+466122 | MsG0580024071.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAATATTTGGAATTATTTAG+GGG | + | Chr5:465882-465901 | MsG0580024071.01.T01:CDS | 15.0% |
| !!! | ACAAATATTTGGAATTATTT+AGG | + | Chr5:465880-465899 | MsG0580024071.01.T01:CDS | 15.0% |
| !!! | CAAATATTTGGAATTATTTA+GGG | + | Chr5:465881-465900 | MsG0580024071.01.T01:CDS | 15.0% |
| !! | ATTATGATCTAATACAAACT+TGG | - | Chr5:465752-465771 | None:intergenic | 20.0% |
| !! | TTTAAGAATAATGAATATGG+AGG | + | Chr5:465637-465656 | MsG0580024071.01.T01:CDS | 20.0% |
| !!! | AACAGTAAAACTCTTTAAAA+CGG | - | Chr5:465606-465625 | None:intergenic | 20.0% |
| ! | ATTATTCTTAAACCCTTCTT+TGG | - | Chr5:465629-465648 | None:intergenic | 25.0% |
| ! | GGGTTTAAGAATAATGAATA+TGG | + | Chr5:465634-465653 | MsG0580024071.01.T01:CDS | 25.0% |
| ! | GTATACGAGTTACAAATATT+TGG | + | Chr5:465869-465888 | MsG0580024071.01.T01:CDS | 25.0% |
| ! | TGTACATTGTAATAGAACAT+AGG | - | Chr5:466048-466067 | None:intergenic | 25.0% |
| !! | AAAGTTGATTATGATTGCTT+TGG | + | Chr5:466120-466139 | MsG0580024071.01.T01:CDS | 25.0% |
| !! | AAGTTGATTATGATTGCTTT+GGG | + | Chr5:466121-466140 | MsG0580024071.01.T01:CDS | 25.0% |
| !!! | ACAGTAAAACTCTTTAAAAC+GGG | - | Chr5:465605-465624 | None:intergenic | 25.0% |
| AAGTTGAAATTGATTGAAGC+TGG | + | Chr5:465973-465992 | MsG0580024071.01.T01:CDS | 30.0% | |
| AATTCACCATAGACTTTATG+AGG | - | Chr5:465846-465865 | None:intergenic | 30.0% | |
| AGTTGAAATTGATTGAAGCT+GGG | + | Chr5:465974-465993 | MsG0580024071.01.T01:CDS | 30.0% | |
| AGTTGATTATGATTGCTTTG+GGG | + | Chr5:466122-466141 | MsG0580024071.01.T01:CDS | 30.0% | |
| ATAAAGTCTATGGTGAATTC+TGG | + | Chr5:465847-465866 | MsG0580024071.01.T01:CDS | 30.0% | |
| GACATTTGACATATTTCTCA+TGG | - | Chr5:465815-465834 | None:intergenic | 30.0% | |
| TGTCAATCAGTTGAAATTGA+TGG | + | Chr5:465442-465461 | MsG0580024071.01.T01:CDS | 30.0% | |
| ! | AGTTTTACTGTTCCAAAGAA+GGG | + | Chr5:465614-465633 | MsG0580024071.01.T01:CDS | 30.0% |
| ! | GGATGCAAAGATATTTTTCT+TGG | + | Chr5:465463-465482 | MsG0580024071.01.T01:CDS | 30.0% |
| AAGGACAAATTGCAAAGCTA+TGG | + | Chr5:465687-465706 | MsG0580024071.01.T01:CDS | 35.0% | |
| AATTATTTAGGGGAAGAGGT+CGG | + | Chr5:465892-465911 | MsG0580024071.01.T01:CDS | 35.0% | |
| ACGAAACCTCATAAAGTCTA+TGG | + | Chr5:465837-465856 | MsG0580024071.01.T01:CDS | 35.0% | |
| AGGTTTAATGTTAGCAAGGA+AGG | + | Chr5:465712-465731 | MsG0580024071.01.T01:CDS | 35.0% | |
| GTTGAAATTGATTGAAGCTG+GGG | + | Chr5:465975-465994 | MsG0580024071.01.T01:CDS | 35.0% | |
| TAATGAATATGGAGGTGAAG+TGG | + | Chr5:465645-465664 | MsG0580024071.01.T01:CDS | 35.0% | |
| TTACAATGTACAGCTAGATC+AGG | + | Chr5:466056-466075 | MsG0580024071.01.T01:CDS | 35.0% | |
| TTGGAATTATTTAGGGGAAG+AGG | + | Chr5:465888-465907 | MsG0580024071.01.T01:CDS | 35.0% | |
| ! | CTCGTTTGACTAATGTCTTT+TGG | + | Chr5:466082-466101 | MsG0580024071.01.T01:CDS | 35.0% |
| ! | CTTATGAAAGAGCTGATTCA+AGG | + | Chr5:465668-465687 | MsG0580024071.01.T01:CDS | 35.0% |
| ! | GAGTTTTACTGTTCCAAAGA+AGG | + | Chr5:465613-465632 | MsG0580024071.01.T01:CDS | 35.0% |
| ! | TACACCAAATCCTGATTTGA+AGG | - | Chr5:465539-465558 | None:intergenic | 35.0% |
| !! | ACTAATGTCTTTTGGAGAGA+TGG | + | Chr5:466090-466109 | MsG0580024071.01.T01:CDS | 35.0% |
| !! | ATTTGGTGTAAGAAAAGGGA+GGG | + | Chr5:465549-465568 | MsG0580024071.01.T01:CDS | 35.0% |
| !! | CAGGATTTGGTGTAAGAAAA+GGG | + | Chr5:465545-465564 | MsG0580024071.01.T01:CDS | 35.0% |
| !! | TCAGGATTTGGTGTAAGAAA+AGG | + | Chr5:465544-465563 | MsG0580024071.01.T01:CDS | 35.0% |
| AACAAATGTCTTTGCTCAGG+AGG | - | Chr5:465787-465806 | None:intergenic | 40.0% | |
| ATGTTAGCAAGGAAGGAGTT+TGG | + | Chr5:465719-465738 | MsG0580024071.01.T01:CDS | 40.0% | |
| CAAATTGCAAAGCTATGGTG+AGG | + | Chr5:465692-465711 | MsG0580024071.01.T01:CDS | 40.0% | |
| CATGCCTTCAAATCAGGATT+TGG | + | Chr5:465532-465551 | MsG0580024071.01.T01:CDS | 40.0% | |
| GGTGAGGTTTAATGTTAGCA+AGG | + | Chr5:465708-465727 | MsG0580024071.01.T01:CDS | 40.0% | |
| GTCGGTGGATATAACAATCT+TGG | + | Chr5:465910-465929 | MsG0580024071.01.T01:CDS | 40.0% | |
| ! | CTGAGCAAAGACATTTGTTG+CGG | + | Chr5:465788-465807 | MsG0580024071.01.T01:CDS | 40.0% |
| !! | GATTTGGTGTAAGAAAAGGG+AGG | + | Chr5:465548-465567 | MsG0580024071.01.T01:CDS | 40.0% |
| CAAGCACATGCCTTCAAATC+AGG | + | Chr5:465526-465545 | MsG0580024071.01.T01:CDS | 45.0% | |
| CGCAACAAATGTCTTTGCTC+AGG | - | Chr5:465790-465809 | None:intergenic | 45.0% | |
| TATTTAGGGGAAGAGGTCGG+TGG | + | Chr5:465895-465914 | MsG0580024071.01.T01:CDS | 50.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr5 | gene | 465427 | 466170 | 465427 | ID=MsG0580024071.01;Name=MsG0580024071.01 |
| Chr5 | mRNA | 465427 | 466170 | 465427 | ID=MsG0580024071.01.T01;Parent=MsG0580024071.01;Name=MsG0580024071.01.T01;_AED=0.35;_eAED=0.35;_QI=0|-1|0|1|-1|1|1|0|247 |
| Chr5 | exon | 465427 | 466170 | 465427 | ID=MsG0580024071.01.T01:exon:23063;Parent=MsG0580024071.01.T01 |
| Chr5 | CDS | 465427 | 466170 | 465427 | ID=MsG0580024071.01.T01:cds;Parent=MsG0580024071.01.T01 |
| Gene Sequence |
| Protein sequence |
