Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580024817.01.T01 | XP_003611723.1 | 77.397 | 146 | 26 | 4 | 1 | 143 | 133 | 274 | 3.28E-66 | 213 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580024817.01.T01 | Q9SND6 | 48.322 | 149 | 56 | 6 | 1 | 136 | 134 | 274 | 3.12E-33 | 122 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580024817.01.T01 | G7K6M4 | 77.397 | 146 | 26 | 4 | 1 | 143 | 133 | 274 | 1.57e-66 | 213 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580024817.01.T01 | MTR_5g017140 | 77.397 | 146 | 26 | 4 | 1 | 143 | 133 | 274 | 3.97e-70 | 213 |
| MsG0580024817.01.T01 | MTR_5g017110 | 59.459 | 148 | 51 | 4 | 1 | 143 | 134 | 277 | 1.23e-45 | 152 |
| MsG0580024817.01.T01 | MTR_0189s0010 | 57.042 | 142 | 52 | 4 | 1 | 138 | 151 | 287 | 3.98e-42 | 143 |
| MsG0580024817.01.T01 | MTR_0154s0020 | 55.634 | 142 | 54 | 4 | 1 | 138 | 131 | 267 | 1.22e-40 | 139 |
| MsG0580024817.01.T01 | MTR_0154s0040 | 55.319 | 141 | 54 | 4 | 1 | 137 | 131 | 266 | 6.23e-40 | 137 |
| MsG0580024817.01.T01 | MTR_8g098425 | 39.695 | 131 | 73 | 3 | 3 | 131 | 538 | 664 | 4.70e-22 | 91.3 |
| MsG0580024817.01.T01 | MTR_1g100250 | 38.168 | 131 | 75 | 3 | 3 | 131 | 541 | 667 | 3.17e-21 | 89.0 |
| MsG0580024817.01.T01 | MTR_3g096230 | 36.090 | 133 | 79 | 3 | 3 | 133 | 374 | 502 | 4.10e-21 | 88.6 |
| MsG0580024817.01.T01 | MTR_3g096230 | 36.090 | 133 | 79 | 3 | 3 | 133 | 374 | 502 | 6.21e-21 | 88.2 |
| MsG0580024817.01.T01 | MTR_2g023890 | 41.176 | 136 | 70 | 6 | 3 | 136 | 132 | 259 | 8.68e-21 | 86.7 |
| MsG0580024817.01.T01 | MTR_2g005290 | 30.667 | 150 | 83 | 3 | 3 | 131 | 139 | 288 | 1.00e-18 | 81.3 |
| MsG0580024817.01.T01 | MTR_2g088020 | 41.985 | 131 | 66 | 5 | 3 | 131 | 134 | 256 | 1.13e-18 | 81.3 |
| MsG0580024817.01.T01 | MTR_8g093730 | 34.586 | 133 | 81 | 3 | 3 | 133 | 429 | 557 | 2.09e-18 | 80.9 |
| MsG0580024817.01.T01 | MTR_7g113490 | 34.586 | 133 | 83 | 3 | 3 | 132 | 201 | 332 | 3.19e-18 | 80.5 |
| MsG0580024817.01.T01 | MTR_3g073250 | 37.121 | 132 | 74 | 3 | 3 | 131 | 398 | 523 | 3.77e-18 | 80.1 |
| MsG0580024817.01.T01 | MTR_4g049730 | 38.060 | 134 | 74 | 5 | 3 | 134 | 126 | 252 | 4.54e-18 | 79.7 |
| MsG0580024817.01.T01 | MTR_5g059880 | 37.879 | 132 | 73 | 4 | 3 | 131 | 320 | 445 | 7.69e-18 | 79.0 |
| MsG0580024817.01.T01 | MTR_5g059940 | 36.090 | 133 | 76 | 3 | 3 | 132 | 253 | 379 | 3.16e-17 | 77.0 |
| MsG0580024817.01.T01 | MTR_3g101210 | 31.757 | 148 | 83 | 5 | 3 | 140 | 438 | 577 | 5.08e-17 | 77.0 |
| MsG0580024817.01.T01 | MTR_3g101210 | 31.757 | 148 | 83 | 5 | 3 | 140 | 438 | 577 | 5.42e-17 | 76.6 |
| MsG0580024817.01.T01 | MTR_5g060350 | 36.364 | 132 | 75 | 3 | 3 | 131 | 449 | 574 | 5.50e-17 | 76.6 |
| MsG0580024817.01.T01 | MTR_0685s0020 | 37.405 | 131 | 73 | 3 | 3 | 130 | 119 | 243 | 5.60e-17 | 75.5 |
| MsG0580024817.01.T01 | MTR_5g017890 | 35.211 | 142 | 78 | 5 | 3 | 136 | 503 | 638 | 7.05e-17 | 76.6 |
| MsG0580024817.01.T01 | MTR_4g094415 | 37.121 | 132 | 74 | 4 | 3 | 131 | 292 | 417 | 1.99e-16 | 75.1 |
| MsG0580024817.01.T01 | MTR_1g105290 | 35.338 | 133 | 82 | 3 | 3 | 132 | 188 | 319 | 2.02e-16 | 75.1 |
| MsG0580024817.01.T01 | MTR_1g105290 | 35.338 | 133 | 82 | 3 | 3 | 132 | 188 | 319 | 2.11e-16 | 75.1 |
| MsG0580024817.01.T01 | MTR_1g105290 | 35.338 | 133 | 82 | 3 | 3 | 132 | 188 | 319 | 3.22e-16 | 74.7 |
| MsG0580024817.01.T01 | MTR_5g071560 | 41.667 | 120 | 63 | 4 | 13 | 131 | 150 | 263 | 6.06e-14 | 67.8 |
| MsG0580024817.01.T01 | MTR_4g074875 | 33.088 | 136 | 86 | 3 | 3 | 137 | 149 | 280 | 1.19e-12 | 64.3 |
| MsG0580024817.01.T01 | MTR_4g074875 | 33.088 | 136 | 86 | 3 | 3 | 137 | 149 | 280 | 1.26e-12 | 64.3 |
| MsG0580024817.01.T01 | MTR_5g059910 | 33.835 | 133 | 79 | 3 | 3 | 132 | 259 | 385 | 3.31e-12 | 62.8 |
| MsG0580024817.01.T01 | MTR_4g075410 | 32.576 | 132 | 84 | 3 | 3 | 133 | 149 | 276 | 3.79e-12 | 63.2 |
| MsG0580024817.01.T01 | MTR_4g075410 | 32.576 | 132 | 84 | 3 | 3 | 133 | 149 | 276 | 3.86e-12 | 63.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580024817.01.T01 | AT3G50310 | 48.322 | 149 | 56 | 6 | 1 | 136 | 134 | 274 | 3.18e-34 | 122 |
| MsG0580024817.01.T01 | AT5G67080 | 47.020 | 151 | 66 | 6 | 1 | 142 | 136 | 281 | 1.05e-33 | 120 |
| MsG0580024817.01.T01 | AT4G36950 | 47.826 | 138 | 61 | 4 | 1 | 132 | 134 | 266 | 2.08e-31 | 114 |
| MsG0580024817.01.T01 | AT1G05100 | 42.336 | 137 | 70 | 4 | 3 | 135 | 136 | 267 | 3.05e-23 | 93.2 |
| MsG0580024817.01.T01 | AT1G07150 | 38.686 | 137 | 78 | 4 | 3 | 138 | 141 | 272 | 1.32e-21 | 89.7 |
| MsG0580024817.01.T01 | AT1G07150 | 38.686 | 137 | 78 | 4 | 3 | 138 | 155 | 286 | 1.36e-21 | 89.7 |
| MsG0580024817.01.T01 | AT4G26890 | 40.000 | 135 | 71 | 4 | 3 | 135 | 131 | 257 | 1.91e-21 | 89.4 |
| MsG0580024817.01.T01 | AT5G55090 | 42.748 | 131 | 68 | 4 | 13 | 141 | 141 | 266 | 1.92e-21 | 89.4 |
| MsG0580024817.01.T01 | AT5G55090 | 42.748 | 131 | 68 | 4 | 13 | 141 | 203 | 328 | 2.99e-21 | 89.0 |
| MsG0580024817.01.T01 | AT2G32510 | 38.621 | 145 | 76 | 5 | 3 | 139 | 131 | 270 | 2.91e-20 | 85.5 |
| MsG0580024817.01.T01 | AT2G30040 | 40.690 | 145 | 77 | 6 | 3 | 144 | 145 | 283 | 4.68e-20 | 85.5 |
| MsG0580024817.01.T01 | AT1G63700 | 36.567 | 134 | 79 | 3 | 3 | 134 | 530 | 659 | 6.98e-20 | 85.1 |
| MsG0580024817.01.T01 | AT1G63700 | 36.567 | 134 | 79 | 3 | 3 | 134 | 530 | 659 | 6.98e-20 | 85.1 |
| MsG0580024817.01.T01 | AT1G54960 | 34.028 | 144 | 92 | 3 | 3 | 144 | 201 | 343 | 2.27e-18 | 80.9 |
| MsG0580024817.01.T01 | AT1G54960 | 34.028 | 144 | 92 | 3 | 3 | 144 | 201 | 343 | 2.27e-18 | 80.9 |
| MsG0580024817.01.T01 | AT1G53570 | 33.333 | 138 | 86 | 3 | 3 | 138 | 344 | 477 | 2.50e-18 | 80.9 |
| MsG0580024817.01.T01 | AT1G53570 | 33.333 | 138 | 86 | 3 | 3 | 138 | 344 | 477 | 2.50e-18 | 80.9 |
| MsG0580024817.01.T01 | AT1G53570 | 33.333 | 138 | 86 | 3 | 3 | 138 | 344 | 477 | 2.50e-18 | 80.5 |
| MsG0580024817.01.T01 | AT1G53570 | 33.333 | 138 | 86 | 3 | 3 | 138 | 344 | 477 | 2.52e-18 | 80.9 |
| MsG0580024817.01.T01 | AT1G53570 | 33.333 | 138 | 86 | 3 | 3 | 138 | 344 | 477 | 2.52e-18 | 80.9 |
| MsG0580024817.01.T01 | AT1G53570 | 33.333 | 138 | 86 | 3 | 3 | 138 | 344 | 477 | 2.58e-18 | 80.5 |
| MsG0580024817.01.T01 | AT1G09000 | 35.664 | 143 | 89 | 3 | 3 | 143 | 202 | 343 | 9.25e-18 | 79.0 |
| MsG0580024817.01.T01 | AT1G09000 | 35.664 | 143 | 89 | 3 | 3 | 143 | 202 | 343 | 1.07e-17 | 79.0 |
| MsG0580024817.01.T01 | AT3G46140 | 40.650 | 123 | 68 | 4 | 13 | 131 | 248 | 369 | 2.15e-17 | 77.8 |
| MsG0580024817.01.T01 | AT3G06030 | 34.091 | 132 | 84 | 3 | 3 | 132 | 201 | 331 | 4.82e-17 | 77.0 |
| MsG0580024817.01.T01 | AT4G12020 | 34.815 | 135 | 73 | 3 | 3 | 132 | 1679 | 1803 | 1.45e-16 | 75.9 |
| MsG0580024817.01.T01 | AT4G12020 | 34.815 | 135 | 73 | 3 | 3 | 132 | 1754 | 1878 | 1.45e-16 | 75.9 |
| MsG0580024817.01.T01 | AT4G12020 | 34.815 | 135 | 73 | 3 | 3 | 132 | 1746 | 1870 | 1.48e-16 | 75.9 |
| MsG0580024817.01.T01 | AT3G46160 | 37.313 | 134 | 76 | 5 | 4 | 131 | 201 | 332 | 7.94e-16 | 73.2 |
| MsG0580024817.01.T01 | AT4G12020 | 34.615 | 130 | 64 | 3 | 3 | 132 | 1754 | 1862 | 1.87e-15 | 72.4 |
| MsG0580024817.01.T01 | AT4G12020 | 34.615 | 130 | 64 | 3 | 3 | 132 | 1746 | 1854 | 1.95e-15 | 72.4 |
| MsG0580024817.01.T01 | AT5G66850 | 31.206 | 141 | 79 | 5 | 3 | 133 | 477 | 609 | 1.33e-14 | 70.1 |
| MsG0580024817.01.T01 | AT5G66850 | 31.206 | 141 | 79 | 5 | 3 | 133 | 477 | 609 | 1.55e-14 | 69.7 |
| MsG0580024817.01.T01 | AT4G08500 | 36.090 | 133 | 75 | 4 | 3 | 131 | 461 | 587 | 1.82e-14 | 69.7 |
| MsG0580024817.01.T01 | AT1G53570 | 32.653 | 98 | 64 | 1 | 43 | 138 | 354 | 451 | 9.51e-14 | 67.4 |
| MsG0580024817.01.T01 | AT3G45670 | 35.338 | 133 | 75 | 4 | 13 | 138 | 244 | 372 | 1.74e-13 | 66.6 |
| MsG0580024817.01.T01 | AT4G04632 | 39.796 | 98 | 54 | 3 | 43 | 135 | 1 | 98 | 4.09e-13 | 62.0 |
| MsG0580024817.01.T01 | AT4G08480 | 32.143 | 140 | 69 | 4 | 4 | 131 | 630 | 755 | 1.24e-12 | 64.3 |
| MsG0580024817.01.T01 | AT4G08470 | 30.714 | 140 | 73 | 4 | 3 | 131 | 349 | 475 | 2.26e-12 | 63.5 |
| MsG0580024817.01.T01 | AT4G08470 | 30.714 | 140 | 73 | 4 | 3 | 131 | 431 | 557 | 2.93e-12 | 63.2 |
| MsG0580024817.01.T01 | AT3G13530 | 32.576 | 132 | 84 | 3 | 3 | 133 | 149 | 276 | 4.54e-12 | 62.8 |
| MsG0580024817.01.T01 | AT3G07980 | 31.818 | 132 | 85 | 4 | 3 | 133 | 149 | 276 | 1.04e-11 | 62.0 |
| MsG0580024817.01.T01 | AT3G07980 | 31.818 | 132 | 85 | 4 | 3 | 133 | 149 | 276 | 1.19e-11 | 61.6 |
| MsG0580024817.01.T01 | AT2G42550 | 34.307 | 137 | 77 | 6 | 3 | 131 | 143 | 274 | 7.07e-11 | 58.9 |
| MsG0580024817.01.T01 | AT2G41930 | 33.577 | 137 | 67 | 6 | 12 | 136 | 157 | 281 | 8.62e-11 | 58.9 |
Find 36 sgRNAs with CRISPR-Local
Find 38 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CACATCCATATCACCGCTTC+TGG | 0.337412 | 5:+10173382 | None:intergenic |
| TGTCACCAGAAGCGGTGATA+TGG | 0.351676 | 5:-10173387 | MsG0580024817.01.T01:CDS |
| GTGTGTGGAAGACGGATATA+TGG | 0.363357 | 5:-10173360 | MsG0580024817.01.T01:CDS |
| CCTTCTCGTAATAATTCATC+TGG | 0.379686 | 5:+10173226 | None:intergenic |
| TCTGGTGACATATCATTATC+TGG | 0.395860 | 5:+10173400 | None:intergenic |
| TTAAGGATCCTTTGAGAAGA+TGG | 0.405417 | 5:-10173177 | MsG0580024817.01.T01:CDS |
| TGATGTTGACGATTCGAATT+GGG | 0.421148 | 5:-10173273 | MsG0580024817.01.T01:CDS |
| TCTTGAAAAGTGTTTCGTTA+AGG | 0.422240 | 5:-10173194 | MsG0580024817.01.T01:CDS |
| TTGATGTTGACGATTCGAAT+TGG | 0.426586 | 5:-10173274 | MsG0580024817.01.T01:CDS |
| TTCTCGAATACGAGAATGTT+GGG | 0.438025 | 5:+10173511 | None:intergenic |
| GCTAGTGTGGAAATGGTTAC+TGG | 0.449239 | 5:-10173325 | MsG0580024817.01.T01:CDS |
| TGACATATCATTATCTGGTC+CGG | 0.454822 | 5:+10173405 | None:intergenic |
| TTGACGATTCGAATTGGGGT+TGG | 0.467699 | 5:-10173268 | MsG0580024817.01.T01:CDS |
| TGGTTGCGCTAGTGTGGAAA+TGG | 0.477249 | 5:-10173332 | MsG0580024817.01.T01:CDS |
| AACATTCTCGTATTCGAGAA+TGG | 0.492631 | 5:-10173508 | MsG0580024817.01.T01:CDS |
| CAGATGAATTATTACGAGAA+GGG | 0.520167 | 5:-10173225 | MsG0580024817.01.T01:CDS |
| GACATATCATTATCTGGTCC+GGG | 0.525671 | 5:+10173406 | None:intergenic |
| CCAGATGAATTATTACGAGA+AGG | 0.525954 | 5:-10173226 | MsG0580024817.01.T01:CDS |
| AAGACGGATATATGGGCTCT+TGG | 0.538128 | 5:-10173352 | MsG0580024817.01.T01:CDS |
| ATTCTCGAATACGAGAATGT+TGG | 0.543098 | 5:+10173510 | None:intergenic |
| GGCTCTTGGTTGCGCTAGTG+TGG | 0.543527 | 5:-10173338 | MsG0580024817.01.T01:CDS |
| TGGCGATCAAGAGGAACTCC+CGG | 0.556693 | 5:-10173424 | MsG0580024817.01.T01:CDS |
| CGGTGATATGGATGTGTGTG+TGG | 0.571269 | 5:-10173375 | MsG0580024817.01.T01:CDS |
| GGTGAAAAGTGGCGATCAAG+AGG | 0.575193 | 5:-10173433 | MsG0580024817.01.T01:CDS |
| TAATGATATGTCACCAGAAG+CGG | 0.578864 | 5:-10173395 | MsG0580024817.01.T01:CDS |
| TGTGTGGAAGACGGATATAT+GGG | 0.584811 | 5:-10173359 | MsG0580024817.01.T01:CDS |
| GTTGTAACAGAGTTAAGTTG+AGG | 0.584853 | 5:-10173100 | None:intergenic |
| ATGGATGTGTGTGTGGAAGA+CGG | 0.590089 | 5:-10173368 | MsG0580024817.01.T01:CDS |
| GGGTTGAACAAGGTGAAAAG+TGG | 0.592877 | 5:-10173444 | MsG0580024817.01.T01:CDS |
| TCAGTCTTGCGAAAGAGACA+AGG | 0.595495 | 5:-10173465 | MsG0580024817.01.T01:CDS |
| GATGTTGACGATTCGAATTG+GGG | 0.607028 | 5:-10173272 | MsG0580024817.01.T01:CDS |
| TCTATCGTCCATCTTCTCAA+AGG | 0.609523 | 5:+10173169 | None:intergenic |
| CAGTCTTGCGAAAGAGACAA+GGG | 0.612424 | 5:-10173464 | MsG0580024817.01.T01:CDS |
| TGGTTACTGGAGAATCCGCA+TGG | 0.636768 | 5:-10173312 | MsG0580024817.01.T01:CDS |
| AAAGAGACAAGGGTTGAACA+AGG | 0.656891 | 5:-10173454 | MsG0580024817.01.T01:CDS |
| CATATCTGACACATTCCATG+CGG | 0.745519 | 5:+10173297 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATAATTCATCTGGAATTTT+TGG | + | Chr5:10173384-10173403 | None:intergenic | 20.0% |
| !! | AACTGAAACATTTTCAACAT+CGG | + | Chr5:10173499-10173518 | None:intergenic | 25.0% |
| CAGATGAATTATTACGAGAA+GGG | - | Chr5:10173391-10173410 | MsG0580024817.01.T01:CDS | 30.0% | |
| ! | TTTTCAACATCGGAGATAAA+CGG | + | Chr5:10173489-10173508 | None:intergenic | 30.0% |
| !! | TCTTGAAAAGTGTTTCGTTA+AGG | - | Chr5:10173422-10173441 | MsG0580024817.01.T01:CDS | 30.0% |
| AACATTCTCGTATTCGAGAA+TGG | - | Chr5:10173108-10173127 | MsG0580024817.01.T01:CDS | 35.0% | |
| ATTCTCGAATACGAGAATGT+TGG | + | Chr5:10173109-10173128 | None:intergenic | 35.0% | |
| CCAGATGAATTATTACGAGA+AGG | - | Chr5:10173390-10173409 | MsG0580024817.01.T01:CDS | 35.0% | |
| CCTTCTCGTAATAATTCATC+TGG | + | Chr5:10173393-10173412 | None:intergenic | 35.0% | |
| TAATGATATGTCACCAGAAG+CGG | - | Chr5:10173221-10173240 | MsG0580024817.01.T01:CDS | 35.0% | |
| TCTGGTGACATATCATTATC+TGG | + | Chr5:10173219-10173238 | None:intergenic | 35.0% | |
| TGACATATCATTATCTGGTC+CGG | + | Chr5:10173214-10173233 | None:intergenic | 35.0% | |
| TGATGTTGACGATTCGAATT+GGG | - | Chr5:10173343-10173362 | MsG0580024817.01.T01:CDS | 35.0% | |
| TTCTCGAATACGAGAATGTT+GGG | + | Chr5:10173108-10173127 | None:intergenic | 35.0% | |
| TTGATGTTGACGATTCGAAT+TGG | - | Chr5:10173342-10173361 | MsG0580024817.01.T01:CDS | 35.0% | |
| ! | TTAAGGATCCTTTGAGAAGA+TGG | - | Chr5:10173439-10173458 | MsG0580024817.01.T01:CDS | 35.0% |
| AAAGAGACAAGGGTTGAACA+AGG | - | Chr5:10173162-10173181 | MsG0580024817.01.T01:CDS | 40.0% | |
| CATATCTGACACATTCCATG+CGG | + | Chr5:10173322-10173341 | None:intergenic | 40.0% | |
| GACATATCATTATCTGGTCC+GGG | + | Chr5:10173213-10173232 | None:intergenic | 40.0% | |
| GATGTTGACGATTCGAATTG+GGG | - | Chr5:10173344-10173363 | MsG0580024817.01.T01:CDS | 40.0% | |
| TCTATCGTCCATCTTCTCAA+AGG | + | Chr5:10173450-10173469 | None:intergenic | 40.0% | |
| TGTGTGGAAGACGGATATAT+GGG | - | Chr5:10173257-10173276 | MsG0580024817.01.T01:CDS | 40.0% | |
| AAGACGGATATATGGGCTCT+TGG | - | Chr5:10173264-10173283 | MsG0580024817.01.T01:CDS | 45.0% | |
| ATGGATGTGTGTGTGGAAGA+CGG | - | Chr5:10173248-10173267 | MsG0580024817.01.T01:CDS | 45.0% | |
| CAGTCTTGCGAAAGAGACAA+GGG | - | Chr5:10173152-10173171 | MsG0580024817.01.T01:CDS | 45.0% | |
| GCTAGTGTGGAAATGGTTAC+TGG | - | Chr5:10173291-10173310 | MsG0580024817.01.T01:CDS | 45.0% | |
| GGGTTGAACAAGGTGAAAAG+TGG | - | Chr5:10173172-10173191 | MsG0580024817.01.T01:CDS | 45.0% | |
| GTGTGTGGAAGACGGATATA+TGG | - | Chr5:10173256-10173275 | MsG0580024817.01.T01:CDS | 45.0% | |
| TCAGTCTTGCGAAAGAGACA+AGG | - | Chr5:10173151-10173170 | MsG0580024817.01.T01:CDS | 45.0% | |
| TTGACGATTCGAATTGGGGT+TGG | - | Chr5:10173348-10173367 | MsG0580024817.01.T01:CDS | 45.0% | |
| CACATCCATATCACCGCTTC+TGG | + | Chr5:10173237-10173256 | None:intergenic | 50.0% | |
| CGGTGATATGGATGTGTGTG+TGG | - | Chr5:10173241-10173260 | MsG0580024817.01.T01:CDS | 50.0% | |
| GGTGAAAAGTGGCGATCAAG+AGG | - | Chr5:10173183-10173202 | MsG0580024817.01.T01:CDS | 50.0% | |
| TGGTTACTGGAGAATCCGCA+TGG | - | Chr5:10173304-10173323 | MsG0580024817.01.T01:CDS | 50.0% | |
| TGGTTGCGCTAGTGTGGAAA+TGG | - | Chr5:10173284-10173303 | MsG0580024817.01.T01:CDS | 50.0% | |
| TGTCACCAGAAGCGGTGATA+TGG | - | Chr5:10173229-10173248 | MsG0580024817.01.T01:CDS | 50.0% | |
| TGGCGATCAAGAGGAACTCC+CGG | - | Chr5:10173192-10173211 | MsG0580024817.01.T01:CDS | 55.0% | |
| GGCTCTTGGTTGCGCTAGTG+TGG | - | Chr5:10173278-10173297 | MsG0580024817.01.T01:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr5 | gene | 10173102 | 10173536 | 10173102 | ID=MsG0580024817.01;Name=MsG0580024817.01 |
| Chr5 | mRNA | 10173102 | 10173536 | 10173102 | ID=MsG0580024817.01.T01;Parent=MsG0580024817.01;Name=MsG0580024817.01.T01;_AED=0.43;_eAED=0.44;_QI=0|-1|0|1|-1|1|1|0|144 |
| Chr5 | exon | 10173102 | 10173536 | 10173102 | ID=MsG0580024817.01.T01:exon:26030;Parent=MsG0580024817.01.T01 |
| Chr5 | CDS | 10173102 | 10173536 | 10173102 | ID=MsG0580024817.01.T01:cds;Parent=MsG0580024817.01.T01 |
| Gene Sequence |
| Protein sequence |
