AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0580024891.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580024891.01.T03 MTR_5g018900 97.403 154 4 0 1 154 372 525 8.01e-105 309
MsG0580024891.01.T03 MTR_8g078410 76.282 156 34 1 1 153 376 531 4.00e-72 225
MsG0580024891.01.T03 MTR_1g021835 69.536 151 41 1 3 153 323 468 5.56e-63 200
MsG0580024891.01.T03 MTR_5g081160 64.331 157 43 2 1 153 356 503 1.19e-60 195
MsG0580024891.01.T03 MTR_3g069410 66.452 155 50 1 1 153 358 512 2.56e-57 186
MsG0580024891.01.T03 MTR_1g021835 81.395 43 8 0 3 45 323 365 5.63e-18 79.7
MsG0580024891.01.T01 MTR_5g018900 97.524 525 13 0 1 525 1 525 0.0 1070
MsG0580024891.01.T01 MTR_8g078410 74.812 532 125 5 1 524 1 531 0.0 772
MsG0580024891.01.T01 MTR_1g021835 59.351 524 157 6 1 524 1 468 0.0 611
MsG0580024891.01.T01 MTR_5g081160 50.943 530 196 7 1 524 32 503 1.08e-178 512
MsG0580024891.01.T01 MTR_1g021835 57.933 416 124 5 1 416 1 365 2.22e-170 488
MsG0580024891.01.T01 MTR_3g069410 56.954 453 162 7 101 524 64 512 5.04e-167 483
MsG0580024891.01.T01 MTR_1g021835 56.056 355 109 3 1 355 1 308 1.90e-139 405
MsG0580024891.01.T01 MTR_5g018910 76.404 89 20 1 156 244 496 583 1.29e-41 158
MsG0580024891.01.T02 MTR_5g018900 76.271 295 28 3 17 310 1 254 1.27e-153 447
MsG0580024891.01.T02 MTR_5g018900 98.198 111 2 0 353 463 225 335 2.33e-70 233
MsG0580024891.01.T02 MTR_8g078410 53.265 291 90 4 17 303 1 249 2.20e-88 280
MsG0580024891.01.T02 MTR_8g078410 83.784 111 18 0 353 463 228 338 7.41e-60 205
MsG0580024891.01.T02 MTR_1g021835 74.775 111 28 0 353 463 178 288 2.90e-52 179
MsG0580024891.01.T02 MTR_1g021835 56.028 141 61 1 127 267 39 178 3.17e-50 174
MsG0580024891.01.T02 MTR_1g021835 74.775 111 28 0 353 463 178 288 2.72e-51 180
MsG0580024891.01.T02 MTR_1g021835 56.028 141 61 1 127 267 39 178 1.17e-49 176
MsG0580024891.01.T02 MTR_1g021835 74.775 111 28 0 353 463 178 288 2.82e-51 181
MsG0580024891.01.T02 MTR_1g021835 56.028 141 61 1 127 267 39 178 4.20e-49 175
MsG0580024891.01.T02 MTR_5g081160 69.369 111 34 0 353 463 210 320 3.30e-50 179
MsG0580024891.01.T02 MTR_5g081160 54.054 74 34 0 198 271 141 214 3.13e-21 97.1
MsG0580024891.01.T02 MTR_3g069410 66.667 111 37 0 353 463 212 322 6.03e-47 170
MsG0580024891.01.T02 MTR_3g069410 37.821 156 67 5 143 271 64 216 1.31e-20 95.1
MsG0580024891.01.T02 MTR_5g018910 92.105 76 6 0 198 273 496 571 8.77e-44 163
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580024891.01.T03 AT4G36860 79.739 153 28 1 1 153 404 553 1.56e-74 232
MsG0580024891.01.T03 AT4G36860 79.739 153 28 1 1 153 428 577 1.93e-74 233
MsG0580024891.01.T03 AT2G39830 66.013 153 52 0 1 153 366 518 5.33e-63 201
MsG0580024891.01.T03 AT2G39830 66.013 153 52 0 1 153 375 527 8.35e-63 201
MsG0580024891.01.T03 AT2G39830 64.744 156 52 1 1 153 375 530 1.29e-60 196
MsG0580024891.01.T03 AT1G19270 66.447 152 45 1 2 153 386 531 1.93e-60 195
MsG0580024891.01.T03 AT1G19270 66.447 152 45 1 2 153 386 531 1.93e-60 195
MsG0580024891.01.T03 AT5G66610 59.310 145 56 1 3 147 283 424 8.63e-47 157
MsG0580024891.01.T03 AT5G66620 57.432 148 61 1 1 146 493 640 1.41e-46 160
MsG0580024891.01.T03 AT5G66610 59.310 145 56 1 3 147 410 551 1.53e-46 159
MsG0580024891.01.T03 AT5G66620 57.432 148 61 1 1 146 484 631 2.47e-46 159
MsG0580024891.01.T03 AT5G66620 57.432 148 61 1 1 146 484 631 2.47e-46 159
MsG0580024891.01.T03 AT5G66630 57.432 148 61 1 1 146 551 698 1.44e-45 158
MsG0580024891.01.T03 AT5G66610 50.000 172 56 2 3 147 410 578 1.04e-40 144
MsG0580024891.01.T03 AT5G17890 54.422 147 64 2 2 146 1456 1601 1.30e-38 139
MsG0580024891.01.T03 AT5G66640 52.113 142 60 3 13 146 190 331 3.30e-36 127
MsG0580024891.01.T03 AT5G66640 52.113 142 60 3 13 146 297 438 2.16e-35 127
MsG0580024891.01.T03 AT5G66640 52.113 142 60 3 13 146 297 438 2.16e-35 127
MsG0580024891.01.T03 AT5G66640 52.113 142 60 3 13 146 329 470 2.47e-35 128
MsG0580024891.01.T03 AT5G66640 52.113 142 60 3 13 146 328 469 2.52e-35 128
MsG0580024891.01.T03 AT4G36860 86.667 45 6 0 1 45 404 448 5.34e-20 85.5
MsG0580024891.01.T03 AT5G66640 41.549 142 71 4 13 146 329 466 1.31e-19 84.7
MsG0580024891.01.T03 AT5G66640 41.549 142 71 4 13 146 328 465 2.11e-19 84.0
MsG0580024891.01.T03 AT2G39830 82.222 45 8 0 1 45 375 419 1.86e-18 81.3
MsG0580024891.01.T01 AT4G36860 66.966 557 147 6 1 524 1 553 0.0 715
MsG0580024891.01.T01 AT4G36860 64.655 580 146 7 1 524 1 577 0.0 709
MsG0580024891.01.T01 AT1G19270 52.921 582 165 9 1 524 1 531 0.0 582
MsG0580024891.01.T01 AT1G19270 52.921 582 165 9 1 524 1 531 0.0 582
MsG0580024891.01.T01 AT4G36860 64.588 449 125 5 1 416 1 448 0.0 569
MsG0580024891.01.T01 AT2G39830 57.528 445 166 4 102 524 75 518 0.0 521
MsG0580024891.01.T01 AT2G39830 56.291 453 174 5 94 524 77 527 0.0 520
MsG0580024891.01.T01 AT2G39830 55.921 456 174 6 94 524 77 530 5.01e-179 514
MsG0580024891.01.T01 AT2G39830 55.362 345 130 5 94 416 77 419 3.17e-135 399
MsG0580024891.01.T01 AT5G66620 46.250 480 229 10 47 517 181 640 1.60e-132 399
MsG0580024891.01.T01 AT5G66620 46.250 480 229 10 47 517 172 631 2.22e-132 399
MsG0580024891.01.T01 AT5G66620 46.250 480 229 10 47 517 172 631 2.22e-132 399
MsG0580024891.01.T01 AT5G66610 44.578 498 234 10 40 518 77 551 1.18e-128 387
MsG0580024891.01.T01 AT5G66610 46.154 455 205 8 66 518 8 424 1.09e-125 374
MsG0580024891.01.T01 AT5G66610 42.286 525 234 11 40 518 77 578 6.65e-123 373
MsG0580024891.01.T01 AT5G66630 48.000 375 176 8 148 517 338 698 4.83e-109 340
MsG0580024891.01.T01 AT5G66640 43.226 465 228 14 71 517 24 470 1.04e-106 327
MsG0580024891.01.T01 AT5G66640 43.488 453 221 13 81 517 5 438 3.01e-106 325
MsG0580024891.01.T01 AT5G66640 43.488 453 221 13 81 517 5 438 3.01e-106 325
MsG0580024891.01.T01 AT5G66640 43.011 465 228 14 71 517 24 469 4.21e-106 326
MsG0580024891.01.T01 AT5G17890 50.000 370 177 5 153 517 1235 1601 9.22e-104 341
MsG0580024891.01.T01 AT5G66640 49.536 323 152 6 205 517 10 331 6.03e-100 305
MsG0580024891.01.T01 AT5G66640 39.785 465 240 15 71 517 24 466 2.03e-90 285
MsG0580024891.01.T01 AT5G66640 39.570 465 240 15 71 517 24 465 8.10e-90 284
MsG0580024891.01.T01 AT5G66620 41.108 343 175 9 47 382 172 494 7.89e-77 251
MsG0580024891.01.T02 AT4G36860 44.776 268 120 4 17 267 1 257 5.76e-69 228
MsG0580024891.01.T02 AT4G36860 84.685 111 17 0 353 463 257 367 1.48e-60 205
MsG0580024891.01.T02 AT4G36860 44.776 268 120 4 17 267 1 257 1.09e-67 227
MsG0580024891.01.T02 AT4G36860 84.685 111 17 0 353 463 257 367 5.61e-60 206
MsG0580024891.01.T02 AT4G36860 41.924 291 119 5 17 267 1 281 3.77e-65 221
MsG0580024891.01.T02 AT4G36860 84.685 111 17 0 353 463 281 391 9.10e-60 206
MsG0580024891.01.T02 AT1G19270 77.477 111 25 0 353 463 239 349 5.74e-56 195
MsG0580024891.01.T02 AT1G19270 32.404 287 110 7 17 267 1 239 1.85e-39 150
MsG0580024891.01.T02 AT1G19270 77.477 111 25 0 353 463 239 349 5.74e-56 195
MsG0580024891.01.T02 AT1G19270 32.404 287 110 7 17 267 1 239 1.85e-39 150
MsG0580024891.01.T02 AT2G39830 67.568 111 36 0 353 463 229 339 2.95e-47 169
MsG0580024891.01.T02 AT2G39830 35.065 154 77 4 136 267 77 229 1.07e-24 106
MsG0580024891.01.T02 AT2G39830 67.568 111 36 0 353 463 220 330 8.14e-47 170
MsG0580024891.01.T02 AT2G39830 37.671 146 69 3 144 267 75 220 1.08e-24 107
MsG0580024891.01.T02 AT2G39830 67.568 111 36 0 353 463 229 339 9.82e-47 170
MsG0580024891.01.T02 AT2G39830 35.065 154 77 4 136 267 77 229 1.97e-24 106
MsG0580024891.01.T02 AT2G39830 67.568 111 36 0 353 463 229 339 9.84e-47 170
MsG0580024891.01.T02 AT2G39830 35.065 154 77 4 136 267 77 229 1.94e-24 106
MsG0580024891.01.T02 AT5G66620 61.000 100 39 0 363 462 347 446 4.97e-38 145
MsG0580024891.01.T02 AT5G66620 33.516 182 97 8 89 264 177 340 1.81e-15 79.3
MsG0580024891.01.T02 AT5G66620 61.000 100 39 0 363 462 356 455 1.10e-37 146
MsG0580024891.01.T02 AT5G66620 35.625 160 83 7 111 264 204 349 1.03e-15 80.5
MsG0580024891.01.T02 AT5G66620 61.000 100 39 0 363 462 347 446 1.82e-37 145
MsG0580024891.01.T02 AT5G66620 35.625 160 83 7 111 264 195 340 1.19e-15 80.1
MsG0580024891.01.T02 AT5G66620 61.000 100 39 0 363 462 347 446 1.82e-37 145
MsG0580024891.01.T02 AT5G66620 35.625 160 83 7 111 264 195 340 1.19e-15 80.1
MsG0580024891.01.T02 AT5G66640 51.695 118 57 0 345 462 23 140 6.50e-37 139
MsG0580024891.01.T02 AT5G66640 51.695 118 57 0 345 462 130 247 3.53e-36 139
MsG0580024891.01.T02 AT5G66640 51.695 118 57 0 345 462 130 247 3.53e-36 139
MsG0580024891.01.T02 AT5G66640 51.695 118 57 0 345 462 162 279 4.82e-36 139
MsG0580024891.01.T02 AT5G66640 51.695 118 57 0 345 462 161 278 5.14e-36 139
MsG0580024891.01.T02 AT5G66640 51.695 118 57 0 345 462 162 279 6.20e-36 139
MsG0580024891.01.T02 AT5G66640 51.695 118 57 0 345 462 161 278 6.95e-36 139
MsG0580024891.01.T02 AT5G66610 56.436 101 44 0 362 462 143 243 2.27e-34 134
MsG0580024891.01.T02 AT5G66610 33.793 145 66 6 126 264 16 136 3.38e-12 68.6
MsG0580024891.01.T02 AT5G17890 51.200 125 60 1 338 462 1291 1414 2.43e-34 138
MsG0580024891.01.T02 AT5G66610 56.436 101 44 0 362 462 270 370 8.50e-34 134
MsG0580024891.01.T02 AT5G66610 32.000 200 97 7 96 264 72 263 1.00e-14 77.0
MsG0580024891.01.T02 AT5G66610 56.436 101 44 0 362 462 270 370 9.10e-34 134
MsG0580024891.01.T02 AT5G66610 32.990 194 103 7 96 264 72 263 1.22e-14 76.6
MsG0580024891.01.T02 AT5G66630 53.636 110 47 2 363 469 417 525 3.49e-31 127

Find 98 sgRNAs with CRISPR-Local

Find 389 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGTATAGAGCTCATCCTTTC+TGG 0.166643 5:+11332628 MsG0580024891.01.T01:CDS
AACATGGTGATGATAGAATT+TGG 0.189733 5:+11329812 MsG0580024891.01.T01:CDS
GGCTCTAATCATAGAATTTC+AGG 0.190682 5:+11329772 MsG0580024891.01.T01:CDS
TCGAAGAATTTCTTCAATTC+AGG 0.202356 5:-11329289 None:intergenic
TCTCCCTGTAGCAGGATTTA+TGG 0.233835 5:-11331616 None:intergenic
TATAGAATGTGGTGAGAAAA+TGG 0.280117 5:-11329232 None:intergenic
CATCGACGGGTCAGTCTATA+AGG 0.282747 5:-11333376 None:intergenic
GTGTCTAGACTCAGCAATTA+TGG 0.285275 5:+11332882 MsG0580024891.01.T01:CDS
CATAAAATTCTAGTATTTCA+TGG 0.285949 5:-11332930 None:intergenic
GTCCTCTAGTTTCAGGTAAA+TGG 0.286014 5:-11333160 None:intergenic
CGGTGTCCTGCCCCTATACT+TGG 0.286586 5:-11333331 None:intergenic
AAGAAATTCTTCGAACTAAC+AGG 0.290166 5:+11329298 MsG0580024891.01.T01:five_prime_UTR
CAAATTCATTCATATTTCAT+TGG 0.316172 5:+11329190 MsG0580024891.01.T01:five_prime_UTR
GCAGCAAGTTCCTATGCTTT+TGG 0.319574 5:+11332975 MsG0580024891.01.T01:CDS
AGTTTGAAAAGAGTCGAATT+TGG 0.329205 5:-11333232 None:intergenic
TGCTGTCGAGCTCATGCGTT+GGG 0.363900 5:-11332665 None:intergenic
AAGCAGAGTCCTCTAGTTTC+AGG 0.382892 5:-11333167 None:intergenic
AAAGTAACAACTCTTAAGTT+AGG 0.388996 5:-11333110 None:intergenic
TGGGTAACATATGTTTCTAA+TGG 0.396301 5:+11330213 MsG0580024891.01.T01:intron
TTTGCTTCACTATTGAATGT+AGG 0.406105 5:+11333130 MsG0580024891.01.T01:intron
AAATTCATTCATATTTCATT+GGG 0.410265 5:+11329191 MsG0580024891.01.T01:five_prime_UTR
TTCTTGCAAACATCACATCT+TGG 0.412310 5:-11331647 None:intergenic
ACATGGTGATGATAGAATTT+GGG 0.426199 5:+11329813 MsG0580024891.01.T01:CDS
TTGCTTCACTATTGAATGTA+GGG 0.434761 5:+11333131 MsG0580024891.01.T01:intron
AAGATTTGTGAATTATATAA+CGG 0.442829 5:+11333271 MsG0580024891.01.T01:intron
TCTTGCAAACATCACATCTT+GGG 0.448902 5:-11331646 None:intergenic
GTGATGCTTCTCCCTGTAGC+AGG 0.451634 5:-11331624 None:intergenic
CCCACTCTAAACACATGTTC+AGG 0.454318 5:-11331850 None:intergenic
TGAAAATATGCCACACAAGC+AGG 0.462106 5:-11329696 None:intergenic
GGCTGTCACTTCGCATCGAC+GGG 0.470821 5:-11333389 None:intergenic
CTAACACAACCCCACAAAAC+CGG 0.475920 5:-11331893 None:intergenic
CTGAAAGGCAAGAAAGTTGT+TGG 0.477499 5:+11330047 MsG0580024891.01.T01:CDS
TATTCTTCCATTACAGATCC+CGG 0.479079 5:+11332584 MsG0580024891.01.T01:intron
TGGTTTACAAAGTTTCTCAA+TGG 0.483060 5:+11329751 MsG0580024891.01.T01:CDS
TTGTTGTAGCTGCGAAAGAA+TGG 0.486878 5:+11332695 MsG0580024891.01.T01:CDS
GAATTAGCCGGGATCTGTAA+TGG 0.489893 5:-11332591 None:intergenic
ATCAAAGTAGTCTCTTATCA+TGG 0.492952 5:+11331734 MsG0580024891.01.T01:intron
GTATTTCATGGTAGAGAGGT+TGG 0.496331 5:-11332918 None:intergenic
ATGAGGCCAGCTGAATTAGC+CGG 0.498369 5:-11332603 None:intergenic
GTCCCACATTGGATAACAAA+TGG 0.511407 5:+11331827 MsG0580024891.01.T01:intron
CTTACCATAAATCCTGCTAC+AGG 0.517147 5:+11331612 MsG0580024891.01.T01:CDS
GGCCATTTGTTATCCAATGT+GGG 0.518043 5:-11331829 None:intergenic
CAGATCCCGGCTAATTCAGC+TGG 0.521586 5:+11332597 MsG0580024891.01.T01:intron
CTGTAGCAGGATTTATGGTA+AGG 0.522745 5:-11331611 None:intergenic
GCACTAAATGAGGCCATTGA+GGG 0.528915 5:+11333009 MsG0580024891.01.T01:CDS
CCCCACAAAACCGGCTTGTG+AGG 0.530091 5:-11331884 None:intergenic
GTGCTGTCGAGCTCATGCGT+TGG 0.530772 5:-11332666 None:intergenic
AAAATGGAATCTAGTTCTAG+TGG 0.537056 5:-11329216 None:intergenic
TGGCTGTCACTTCGCATCGA+CGG 0.539258 5:-11333390 None:intergenic
AGCACTAAATGAGGCCATTG+AGG 0.541852 5:+11333008 MsG0580024891.01.T01:CDS
ATATGTTACCCACTTTGAGT+TGG 0.545293 5:-11330202 None:intergenic
GATAACAGAAAGACAGAAGG+AGG 0.546561 5:-11333088 None:intergenic
GCTGCAATGTACATATGCTC+TGG 0.549626 5:+11331775 MsG0580024891.01.T01:intron
TGTTATATGGTTACCTAGGA+AGG 0.552829 5:-11333429 None:intergenic
AGGCCATTTGTTATCCAATG+TGG 0.552952 5:-11331830 None:intergenic
CCTGAACATGTGTTTAGAGT+GGG 0.555099 5:+11331850 MsG0580024891.01.T01:intron
GCAATCCTCACCTCACAAGC+CGG 0.556045 5:+11331874 MsG0580024891.01.T01:intron
AAGAGTCGAATTTGGAAGCA+AGG 0.558267 5:-11333224 None:intergenic
AGAAAACCAAGTATAGGGGC+AGG 0.561310 5:+11333325 MsG0580024891.01.T01:CDS
TGAGGCCAGCTGAATTAGCC+GGG 0.562601 5:-11332602 None:intergenic
GGGCAATACAATGGCAAACA+TGG 0.564946 5:+11329796 MsG0580024891.01.T01:CDS
CTGAGTGCAGGATGATTTGA+CGG 0.565766 5:+11329968 MsG0580024891.01.T01:intron
AGTTAAGTTCCAACTCAAAG+TGG 0.567743 5:+11330193 MsG0580024891.01.T01:intron
ACGGGTCAGTCTATAAGGCT+TGG 0.569106 5:-11333371 None:intergenic
TTTAAGAAAACCAAGTATAG+GGG 0.569581 5:+11333321 MsG0580024891.01.T01:CDS
GTAAGGACGGTTGCTAGACA+TGG 0.570040 5:-11331594 None:intergenic
AGGAATTCCTACGGTGGTGA+CGG 0.573043 5:-11333204 None:intergenic
TCTAGTATTTCATGGTAGAG+AGG 0.573281 5:-11332922 None:intergenic
TGTCTTTCCACCAAAAGCAT+AGG 0.584605 5:-11332985 None:intergenic
TGGTTATCATGTCTGTGACT+CGG 0.588138 5:-11333351 None:intergenic
GGAAAGACAAGCACTAAATG+AGG 0.596661 5:+11332999 MsG0580024891.01.T01:CDS
AAGGCCATACAAAACAAGAA+TGG 0.597233 5:-11333410 None:intergenic
AGCAGGATTTATGGTAAGGA+CGG 0.599912 5:-11331607 None:intergenic
GTTAAGTTCCAACTCAAAGT+GGG 0.600056 5:+11330194 MsG0580024891.01.T01:intron
CTATCAGAGGAGGATCTGAA+AGG 0.603313 5:+11330032 MsG0580024891.01.T01:CDS
TAGGATAACAGAAAGACAGA+AGG 0.610932 5:-11333091 None:intergenic
TGCACTCTCTCTATCAGAGG+AGG 0.611907 5:+11330022 MsG0580024891.01.T01:CDS
GAACAAACCGTCACCACCGT+AGG 0.619707 5:+11333197 MsG0580024891.01.T01:intron
ATAACAGAAAGACAGAAGGA+GGG 0.625973 5:-11333087 None:intergenic
TTGGAAGCAAGGAATTCCTA+CGG 0.626277 5:-11333213 None:intergenic
CAAAACCGGCTTGTGAGGTG+AGG 0.628959 5:-11331879 None:intergenic
GATGAGCTCTATACTCAATG+AGG 0.636611 5:-11332620 None:intergenic
TCAATTCAGGAACACCCAGT+AGG 0.636646 5:-11329276 None:intergenic
ATTTCAGGAGGGCAATACAA+TGG 0.636955 5:+11329787 MsG0580024891.01.T01:CDS
TCGTCAAGATGAAGTCATAG+AGG 0.640438 5:-11329134 None:intergenic
TGAACATGTGTTTAGAGTGG+GGG 0.640742 5:+11331852 MsG0580024891.01.T01:intron
TTACCATAAATCCTGCTACA+GGG 0.641135 5:+11331613 MsG0580024891.01.T01:CDS
GGATAATCATCATAGTTCAG+TGG 0.641892 5:+11329834 MsG0580024891.01.T01:CDS
GCCTGAACATGTGTTTAGAG+TGG 0.642560 5:+11331849 MsG0580024891.01.T01:intron
CACCATTTACCTGAAACTAG+AGG 0.653687 5:+11333158 MsG0580024891.01.T01:CDS
AATTGCACTCTCTCTATCAG+AGG 0.658444 5:+11330019 MsG0580024891.01.T01:CDS
TGTGTAAAAGAGTCCCACAT+TGG 0.659455 5:+11331816 MsG0580024891.01.T01:intron
TCTAATCATAGAATTTCAGG+AGG 0.660809 5:+11329775 MsG0580024891.01.T01:CDS
TTGTAGCTGCGAAAGAATGG+AGG 0.672189 5:+11332698 MsG0580024891.01.T01:CDS
CTGAACATGTGTTTAGAGTG+GGG 0.672789 5:+11331851 MsG0580024891.01.T01:intron
CTAATCATAGAATTTCAGGA+GGG 0.718623 5:+11329776 MsG0580024891.01.T01:CDS
CTTTCGCAGCTACAACAACG+AGG 0.721804 5:-11332690 None:intergenic
GAAGCAAGGAATTCCTACGG+TGG 0.724745 5:-11333210 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATATTTACTTAATAAGTTAT+AGG - Chr5:11332299-11332318 None:intergenic 10.0%
!!! AAGTAAATAATTCAATTTTT+AGG - Chr5:11331178-11331197 None:intergenic 10.0%
!!! TTTGAATCATTTTATATAAT+CGG + Chr5:11330919-11330938 MsG0580024891.01.T01:intron 10.0%
!!! TTTTTTTTTATACTAACATA+TGG + Chr5:11331125-11331144 MsG0580024891.01.T01:intron 10.0%
!! AAATTCATTCATATTTCATT+GGG + Chr5:11329191-11329210 MsG0580024891.01.T01:five_prime_UTR 15.0%
!! AAGATTTGTGAATTATATAA+CGG + Chr5:11333271-11333290 MsG0580024891.01.T01:intron 15.0%
!! ACAATTATTAGATTTCAAAT+AGG - Chr5:11332167-11332186 None:intergenic 15.0%
!! ATGAATATTTAAACTTGAAT+TGG + Chr5:11334772-11334791 MsG0580024891.01.T01:three_prime_UTR 15.0%
!! TTAATGTGTATAAGAAATAT+GGG + Chr5:11330143-11330162 MsG0580024891.01.T01:intron 15.0%
!! TTATGAAGATTATATCTATA+TGG - Chr5:11331084-11331103 None:intergenic 15.0%
!!! AAAAAACATTCTTTTTTGTT+TGG + Chr5:11329344-11329363 MsG0580024891.01.T01:intron 15.0%
!!! AAAAACATTCTTTTTTGTTT+GGG + Chr5:11329345-11329364 MsG0580024891.01.T01:intron 15.0%
!!! GATTAATTTGTATAGAAAAA+TGG - Chr5:11329171-11329190 None:intergenic 15.0%
!!! GATTTTCATAAAAAAGTATT+TGG - Chr5:11330679-11330698 None:intergenic 15.0%
!!! TACTTAGATTTTATTAACTA+AGG - Chr5:11331033-11331052 None:intergenic 15.0%
!!! TATTAAGTATTTCTGAATTA+TGG + Chr5:11330794-11330813 MsG0580024891.01.T01:intron 15.0%
!!! TTGAATCATTTTATATAATC+GGG + Chr5:11330920-11330939 MsG0580024891.01.T01:intron 15.0%
!! AAAAAAATCGTGAGATATAA+CGG - Chr5:11331112-11331131 None:intergenic 20.0%
!! AGATTATGTTACATTAAAAG+AGG + Chr5:11334432-11334451 MsG0580024891.01.T01:three_prime_UTR 20.0%
!! ATAGTTTGAATATGTAATTG+TGG + Chr5:11329941-11329960 MsG0580024891.01.T01:intron 20.0%
!! ATGTAACATAATCTAGTAAA+AGG - Chr5:11334426-11334445 None:intergenic 20.0%
!! ATTTCTTTCATTTCAATAAC+TGG + Chr5:11332070-11332089 MsG0580024891.01.T01:intron 20.0%
!! CAAATTCATTCATATTTCAT+TGG + Chr5:11329190-11329209 MsG0580024891.01.T01:five_prime_UTR 20.0%
!! CAATACGATTATGAATAATA+CGG + Chr5:11331545-11331564 MsG0580024891.01.T01:intron 20.0%
!! CATAAAATTCTAGTATTTCA+TGG - Chr5:11332933-11332952 None:intergenic 20.0%
!! CATAAATTAGAATAGATACT+AGG - Chr5:11332789-11332808 None:intergenic 20.0%
!! CTAGTATCTATTCTAATTTA+TGG + Chr5:11332787-11332806 MsG0580024891.01.T01:intron 20.0%
!! GAAGAAAAAAATATAGAATG+TGG - Chr5:11329246-11329265 None:intergenic 20.0%
!! GTTAATGTGTATAAGAAATA+TGG + Chr5:11330142-11330161 MsG0580024891.01.T01:intron 20.0%
!! GTTGTTCATTTGTTTAAATA+TGG - Chr5:11331249-11331268 None:intergenic 20.0%
!! TAATGTGTATAAGAAATATG+GGG + Chr5:11330144-11330163 MsG0580024891.01.T01:intron 20.0%
!! TGTAACATAATCTAGTAAAA+GGG - Chr5:11334425-11334444 None:intergenic 20.0%
!! TTAAAACATTAATAGCAACT+GGG + Chr5:11332454-11332473 MsG0580024891.01.T01:intron 20.0%
!! TTGAGAATTATGAAGAAAAA+TGG + Chr5:11334518-11334537 MsG0580024891.01.T01:three_prime_UTR 20.0%
!! TTTCAATTTCTTACTAATGA+AGG - Chr5:11329873-11329892 None:intergenic 20.0%
!! TTTGTCAATTATTTGTATGA+TGG - Chr5:11334211-11334230 None:intergenic 20.0%
!!! AAAAGATATTTTGAATCCTT+TGG - Chr5:11332832-11332851 None:intergenic 20.0%
!!! AAATATCTTTTTCTTGATGA+TGG + Chr5:11332841-11332860 MsG0580024891.01.T01:CDS 20.0%
!!! ATTTTAAGAAAACCAAGTAT+AGG + Chr5:11333319-11333338 MsG0580024891.01.T01:CDS 20.0%
!!! GAAATACTAGAATTTTATGA+AGG + Chr5:11332934-11332953 MsG0580024891.01.T01:CDS 20.0%
!!! GGAATAATTTTGTGTAATAT+GGG + Chr5:11329727-11329746 MsG0580024891.01.T01:exon 20.0%
!!! TAAAGATAAATTTCCTGTTT+TGG - Chr5:11334265-11334284 None:intergenic 20.0%
!!! TATATTATAGTTGTTGATTC+TGG + Chr5:11329441-11329460 MsG0580024891.01.T01:intron 20.0%
!!! TTTAAGTTTTGTTGAACAAA+GGG - Chr5:11334330-11334349 None:intergenic 20.0%
!!! TTTTAAGAAAACCAAGTATA+GGG + Chr5:11333320-11333339 MsG0580024891.01.T01:CDS 20.0%
!!! TTTTACTTATACTTTGGTAT+GGG - Chr5:11330318-11330337 None:intergenic 20.0%
! AAAGTAACAACTCTTAAGTT+AGG - Chr5:11333113-11333132 None:intergenic 25.0%
! ATAACTATGACTGAAATTTG+AGG - Chr5:11332236-11332255 None:intergenic 25.0%
! ATATATAATTACCTGAATCC+TGG - Chr5:11330627-11330646 None:intergenic 25.0%
! ATCCATGAACATATGAAAAT+AGG - Chr5:11331218-11331237 None:intergenic 25.0%
! ATTAAATGTGTGCATTCTAA+GGG - Chr5:11335070-11335089 None:intergenic 25.0%
! ATTATGAGATAAAGAACATG+AGG - Chr5:11330343-11330362 None:intergenic 25.0%
! CATACCAAAGTATAAGTAAA+AGG + Chr5:11330317-11330336 MsG0580024891.01.T01:intron 25.0%
! CTTCTTAAAAAAATCCTACT+GGG + Chr5:11329262-11329281 MsG0580024891.01.T01:five_prime_UTR 25.0%
! CTTTCACTGTATATAATTCA+AGG + Chr5:11333483-11333502 MsG0580024891.01.T01:intron 25.0%
! GTTAAAACATTAATAGCAAC+TGG + Chr5:11332453-11332472 MsG0580024891.01.T01:intron 25.0%
! GTTTATCATGTTTCATATCA+TGG - Chr5:11330976-11330995 None:intergenic 25.0%
! GTTTCATAACATATTCTGTT+TGG - Chr5:11330768-11330787 None:intergenic 25.0%
! TAAAACATTAATAGCAACTG+GGG + Chr5:11332455-11332474 MsG0580024891.01.T01:intron 25.0%
! TATCATATGCTTGAAATATG+AGG + Chr5:11332259-11332278 MsG0580024891.01.T01:intron 25.0%
! TATGTTTATAGATTGTTGAC+AGG + Chr5:11333510-11333529 MsG0580024891.01.T01:intron 25.0%
! TCAGAAATACTTAATAACTG+AGG - Chr5:11330790-11330809 None:intergenic 25.0%
! TCTTCTTAAAAAAATCCTAC+TGG + Chr5:11329261-11329280 MsG0580024891.01.T01:five_prime_UTR 25.0%
! TGTTCAACAAAACTTAAACT+CGG + Chr5:11334332-11334351 MsG0580024891.01.T01:three_prime_UTR 25.0%
! TGTTTCCTAATTAGTAACAA+CGG - Chr5:11332755-11332774 None:intergenic 25.0%
! TTTAAGAAAACCAAGTATAG+GGG + Chr5:11333321-11333340 MsG0580024891.01.T01:CDS 25.0%
!! AAAAAGTGTAAAGGAAAACA+AGG - Chr5:11330875-11330894 None:intergenic 25.0%
!! AAAAGTGTAAAGGAAAACAA+GGG - Chr5:11330874-11330893 None:intergenic 25.0%
!! ATCCTATTTTCATATGTTCA+TGG + Chr5:11331213-11331232 MsG0580024891.01.T01:intron 25.0%
!! CTTTTACTTATACTTTGGTA+TGG - Chr5:11330319-11330338 None:intergenic 25.0%
!! GGGAATAATTTTGTGTAATA+TGG + Chr5:11329726-11329745 MsG0580024891.01.T01:exon 25.0%
!! TAAGAAATATGGGGATATTT+TGG + Chr5:11330153-11330172 MsG0580024891.01.T01:intron 25.0%
!! TAATTTTGTGTAATATGGGT+TGG + Chr5:11329731-11329750 MsG0580024891.01.T01:exon 25.0%
!!! CTTTTTAAGAATTCCAAAAC+AGG + Chr5:11334249-11334268 MsG0580024891.01.T01:three_prime_UTR 25.0%
!!! GAATTCTTAAAAAGTGCTTT+AGG - Chr5:11334243-11334262 None:intergenic 25.0%
!!! GTTTAAGTTTTGTTGAACAA+AGG - Chr5:11334331-11334350 None:intergenic 25.0%
!!! TACAATTTTTCTGAGACTTA+AGG + Chr5:11329916-11329935 MsG0580024891.01.T01:intron 25.0%
!!! TACTTGGTTTTCTTAAAATC+TGG - Chr5:11333318-11333337 None:intergenic 25.0%
!!! TTCTGTTTGGCAATATTTTT+TGG - Chr5:11330755-11330774 None:intergenic 25.0%
AAACAAATGAACAACATACC+TGG + Chr5:11331254-11331273 MsG0580024891.01.T01:intron 30.0%
AAAGTGTAAAGGAAAACAAG+GGG - Chr5:11330873-11330892 None:intergenic 30.0%
AACTATATCCAACTCATGAA+GGG - Chr5:11332043-11332062 None:intergenic 30.0%
AAGAAATTCTTCGAACTAAC+AGG + Chr5:11329298-11329317 MsG0580024891.01.T01:five_prime_UTR 30.0%
ACAACTTTGTAAAATTGACG+AGG + Chr5:11330398-11330417 MsG0580024891.01.T01:CDS 30.0%
ACATAATCTAGTAAAAGGGT+AGG - Chr5:11334421-11334440 None:intergenic 30.0%
ACTCAGCAATTCATTAGTTA+GGG + Chr5:11331487-11331506 MsG0580024891.01.T01:intron 30.0%
AGTTTGAAAAGAGTCGAATT+TGG - Chr5:11333235-11333254 None:intergenic 30.0%
ATCAAAGTAGTCTCTTATCA+TGG + Chr5:11331734-11331753 MsG0580024891.01.T01:intron 30.0%
ATTCAATTAAGTTTGAGCAC+TGG + Chr5:11330543-11330562 MsG0580024891.01.T01:CDS 30.0%
ATTTACTTTGTCACGAAACA+TGG + Chr5:11331190-11331209 MsG0580024891.01.T01:intron 30.0%
ATTTCTTGCATGATGTTATC+AGG - Chr5:11333598-11333617 None:intergenic 30.0%
CAAAATACAGATGTAAACAC+CGG - Chr5:11329591-11329610 None:intergenic 30.0%
CTAATCATAGAATTTCAGGA+GGG + Chr5:11329776-11329795 MsG0580024891.01.T01:CDS 30.0%
GAAAACTGTAAAGGAACAAA+TGG - Chr5:11331575-11331594 None:intergenic 30.0%
GATTAAATGTGTGCATTCTA+AGG - Chr5:11335071-11335090 None:intergenic 30.0%
GCTTCATATATTCTAGTAAC+CGG + Chr5:11332010-11332029 MsG0580024891.01.T01:intron 30.0%
GTTTCCTAATTAGTAACAAC+GGG - Chr5:11332754-11332773 None:intergenic 30.0%
TACTCAGCAATTCATTAGTT+AGG + Chr5:11331486-11331505 MsG0580024891.01.T01:intron 30.0%
TAGCTTTCAAACTTTCAACA+TGG - Chr5:11333999-11334018 None:intergenic 30.0%
TATAGAATGTGGTGAGAAAA+TGG - Chr5:11329235-11329254 None:intergenic 30.0%
TCAGAGATTTAGTACATATG+CGG + Chr5:11330827-11330846 MsG0580024891.01.T01:intron 30.0%
TCGAAGAATTTCTTCAATTC+AGG - Chr5:11329292-11329311 None:intergenic 30.0%
TCTAATCATAGAATTTCAGG+AGG + Chr5:11329775-11329794 MsG0580024891.01.T01:CDS 30.0%
TGCAACTTAAAAATCTTCCA+TGG - Chr5:11331331-11331350 None:intergenic 30.0%
TGGTTTACAAAGTTTCTCAA+TGG + Chr5:11329751-11329770 MsG0580024891.01.T01:CDS 30.0%
TTATTGCTTCTGACAATCTT+TGG + Chr5:11335170-11335189 MsG0580024891.01.T01:three_prime_UTR 30.0%
TTGCTTCACTATTGAATGTA+GGG + Chr5:11333131-11333150 MsG0580024891.01.T01:intron 30.0%
TTGTGAAAGCAGATGTTATA+TGG - Chr5:11333445-11333464 None:intergenic 30.0%
TTTATCTCATAATGTCTCAG+AGG + Chr5:11330350-11330369 MsG0580024891.01.T01:intron 30.0%
TTTCATTTCAATAACTGGTC+TGG + Chr5:11332075-11332094 MsG0580024891.01.T01:intron 30.0%
TTTCTTGCATGATGTTATCA+GGG - Chr5:11333597-11333616 None:intergenic 30.0%
TTTGCTTCACTATTGAATGT+AGG + Chr5:11333130-11333149 MsG0580024891.01.T01:intron 30.0%
! AAAGTTTCTTGAAAGCATAG+CGG + Chr5:11329407-11329426 MsG0580024891.01.T01:intron 30.0%
! AACATGGTGATGATAGAATT+TGG + Chr5:11329812-11329831 MsG0580024891.01.T01:CDS 30.0%
! AAGAGGACAAAAAAGTGTAA+AGG - Chr5:11330884-11330903 None:intergenic 30.0%
! ACATGGTGATGATAGAATTT+GGG + Chr5:11329813-11329832 MsG0580024891.01.T01:CDS 30.0%
! ACTGAAATTTGAGGTTAATC+AGG - Chr5:11332227-11332246 None:intergenic 30.0%
! GTGAGACATTTTGTAGTTAT+GGG - Chr5:11334393-11334412 None:intergenic 30.0%
! TCATGTTAGTTTCTCTTTAC+AGG - Chr5:11332190-11332209 None:intergenic 30.0%
! TGATAGACATGTCATTGTTT+TGG - Chr5:11332511-11332530 None:intergenic 30.0%
! TGGGTAACATATGTTTCTAA+TGG + Chr5:11330213-11330232 MsG0580024891.01.T01:intron 30.0%
! TTCATGAGTTGGATATAGTT+GGG + Chr5:11332043-11332062 MsG0580024891.01.T01:intron 30.0%
!! AAAATGGAATCTAGTTCTAG+TGG - Chr5:11329219-11329238 None:intergenic 30.0%
!! ATTTGATTTGAGAGGATGAA+GGG - Chr5:11334086-11334105 None:intergenic 30.0%
!! CAACTGATATTTGATTTGAG+AGG - Chr5:11334094-11334113 None:intergenic 30.0%
!! CAGTATTTTTGTATCCAGAA+AGG - Chr5:11332645-11332664 None:intergenic 30.0%
!! TAAAGGAAAGAAGCATTGTT+CGG - Chr5:11335134-11335153 None:intergenic 30.0%
!! TATTTGATTTGAGAGGATGA+AGG - Chr5:11334087-11334106 None:intergenic 30.0%
!! TCTGATTTTGAGAAGAAACT+TGG + Chr5:11333840-11333859 MsG0580024891.01.T01:CDS 30.0%
!! TGAACATACTCTAGAACAAA+AGG - Chr5:11334300-11334319 None:intergenic 30.0%
!! TGGCATATTTTCAGGAAAAA+GGG + Chr5:11329706-11329725 MsG0580024891.01.T01:intron 30.0%
!! TTGGATTTGCTAATCAGATA+AGG - Chr5:11330660-11330679 None:intergenic 30.0%
!!! GGAAGATTTTTAAGTTGCAT+GGG + Chr5:11331332-11331351 MsG0580024891.01.T01:CDS 30.0%
!!! TGGAAGATTTTTAAGTTGCA+TGG + Chr5:11331331-11331350 MsG0580024891.01.T01:CDS 30.0%
AACAGTATTGCCATTGTGAA+AGG + Chr5:11330993-11331012 MsG0580024891.01.T01:intron 35.0%
AACTTCCACTTCTTTCATGT+TGG - Chr5:11334656-11334675 None:intergenic 35.0%
AAGAAGCAATCTGCTATGAT+GGG + Chr5:11335011-11335030 MsG0580024891.01.T01:three_prime_UTR 35.0%
AAGGCCATACAAAACAAGAA+TGG - Chr5:11333413-11333432 None:intergenic 35.0%
AAGTGTAAAGGAAAACAAGG+GGG - Chr5:11330872-11330891 None:intergenic 35.0%
AATCTAGTAAAAGGGTAGGA+GGG - Chr5:11334417-11334436 None:intergenic 35.0%
ACAATAGATCAGAGCAGTAA+AGG - Chr5:11335151-11335170 None:intergenic 35.0%
ACAGTATTGCCATTGTGAAA+GGG + Chr5:11330994-11331013 MsG0580024891.01.T01:intron 35.0%
ACATAGATACCAACACATGT+CGG - Chr5:11329524-11329543 None:intergenic 35.0%
ACCTAATAAAGTGGACGATA+AGG + Chr5:11330718-11330737 MsG0580024891.01.T01:intron 35.0%
AGCTTCTTAAACATTGAGGT+TGG - Chr5:11331921-11331940 None:intergenic 35.0%
AGTTAAGTTCCAACTCAAAG+TGG + Chr5:11330193-11330212 MsG0580024891.01.T01:intron 35.0%
ATATGTTACCCACTTTGAGT+TGG - Chr5:11330205-11330224 None:intergenic 35.0%
ATGACTTGATTAGAAGAGCT+AGG - Chr5:11334363-11334382 None:intergenic 35.0%
CAACTATATCCAACTCATGA+AGG - Chr5:11332044-11332063 None:intergenic 35.0%
CAGATGTTATATGGTTACCT+AGG - Chr5:11333436-11333455 None:intergenic 35.0%
CAGATTCCTTCTTCAATTTC+TGG - Chr5:11333693-11333712 None:intergenic 35.0%
CAGTTGTCAGATTAATCTGA+TGG + Chr5:11334108-11334127 MsG0580024891.01.T01:three_prime_UTR 35.0%
CATAATCAGTGATTGGAAGA+TGG - Chr5:11331397-11331416 None:intergenic 35.0%
CATATCAGCTTCTCAAGAAT+TGG - Chr5:11334828-11334847 None:intergenic 35.0%
CTAACCTCATAATCAGTGAT+TGG - Chr5:11331404-11331423 None:intergenic 35.0%
CTAATGGTTAGAGATCATTG+AGG + Chr5:11330229-11330248 MsG0580024891.01.T01:intron 35.0%
CTAGACATGGAAAACTGTAA+AGG - Chr5:11331584-11331603 None:intergenic 35.0%
CTATCAACACTCTTAACAAC+TGG + Chr5:11334614-11334633 MsG0580024891.01.T01:three_prime_UTR 35.0%
CTGATGTATGAGAATCTCAA+GGG + Chr5:11334906-11334925 MsG0580024891.01.T01:three_prime_UTR 35.0%
CTTGATCATATCCATTTGAC+CGG + Chr5:11333966-11333985 MsG0580024891.01.T01:CDS 35.0%
CTTTCAACATGGAAAAGTTC+CGG - Chr5:11333988-11334007 None:intergenic 35.0%
GAACAGCTTCTTAAACATTG+AGG - Chr5:11331925-11331944 None:intergenic 35.0%
GCATATGTACTAAATCTCTG+AGG - Chr5:11330828-11330847 None:intergenic 35.0%
GCTTCTTAAACATTGAGGTT+GGG - Chr5:11331920-11331939 None:intergenic 35.0%
GGATAATCATCATAGTTCAG+TGG + Chr5:11329834-11329853 MsG0580024891.01.T01:CDS 35.0%
GGTCAAATGGATATGATCAA+GGG - Chr5:11333967-11333986 None:intergenic 35.0%
GTTAAGTTCCAACTCAAAGT+GGG + Chr5:11330194-11330213 MsG0580024891.01.T01:intron 35.0%
TAATCTAGTAAAAGGGTAGG+AGG - Chr5:11334418-11334437 None:intergenic 35.0%
TATAATTACCTGAATCCTGG+TGG - Chr5:11330624-11330643 None:intergenic 35.0%
TATCTCCAACATGAAAGAAG+TGG + Chr5:11334648-11334667 MsG0580024891.01.T01:three_prime_UTR 35.0%
TATTCTTCCATTACAGATCC+CGG + Chr5:11332584-11332603 MsG0580024891.01.T01:intron 35.0%
TCTAGTATTTCATGGTAGAG+AGG - Chr5:11332925-11332944 None:intergenic 35.0%
TCTCACTTCTCAAAAATGTG+AGG + Chr5:11331943-11331962 MsG0580024891.01.T01:intron 35.0%
TCTTGCAAACATCACATCTT+GGG - Chr5:11331649-11331668 None:intergenic 35.0%
TGATGTATGAGAATCTCAAG+GGG + Chr5:11334907-11334926 MsG0580024891.01.T01:three_prime_UTR 35.0%
TGGTAGAAAACTTGTAGAGA+CGG + Chr5:11329461-11329480 MsG0580024891.01.T01:intron 35.0%
TGTTATATGGTTACCTAGGA+AGG - Chr5:11333432-11333451 None:intergenic 35.0%
TTACCATAAATCCTGCTACA+GGG + Chr5:11331613-11331632 MsG0580024891.01.T01:CDS 35.0%
TTAGAATCAGAGCTCTATTC+TGG + Chr5:11333735-11333754 MsG0580024891.01.T01:CDS 35.0%
TTATAGGTTATCCCAACTTG+AGG + Chr5:11333667-11333686 MsG0580024891.01.T01:intron 35.0%
TTCTTGCAAACATCACATCT+TGG - Chr5:11331650-11331669 None:intergenic 35.0%
TTTGGTATGGGATAGATGAT+CGG - Chr5:11330306-11330325 None:intergenic 35.0%
! ATGAACAACATACCTGGTTT+TGG + Chr5:11331260-11331279 MsG0580024891.01.T01:intron 35.0%
! CAGAGAAATTTTCCAAAACC+AGG - Chr5:11331275-11331294 None:intergenic 35.0%
! CTTCATGAGTTGGATATAGT+TGG + Chr5:11332042-11332061 MsG0580024891.01.T01:intron 35.0%
! GAGGCCTTTTACTTATACTT+TGG - Chr5:11330324-11330343 None:intergenic 35.0%
! GGCTCTAATCATAGAATTTC+AGG + Chr5:11329772-11329791 MsG0580024891.01.T01:CDS 35.0%
! GGTGAGACATTTTGTAGTTA+TGG - Chr5:11334394-11334413 None:intergenic 35.0%
! TCTTCCAATCACTGATTATG+AGG + Chr5:11331397-11331416 MsG0580024891.01.T01:CDS 35.0%
! TTCAACGACTGAGTTTTTGT+TGG + Chr5:11334164-11334183 MsG0580024891.01.T01:three_prime_UTR 35.0%
!! AATCTGATGGTTGATAGTGT+TGG + Chr5:11334121-11334140 MsG0580024891.01.T01:three_prime_UTR 35.0%
!! ATTGATGATGATGAAGACGA+AGG - Chr5:11333783-11333802 None:intergenic 35.0%
!! CATTTTGTAGTTATGGGTTG+AGG - Chr5:11334387-11334406 None:intergenic 35.0%
!! GGCATTGAATTTTGGAAGAA+AGG - Chr5:11332377-11332396 None:intergenic 35.0%
!! GTGGCATATTTTCAGGAAAA+AGG + Chr5:11329705-11329724 MsG0580024891.01.T01:intron 35.0%
!! TTTGATTTGAGAGGATGAAG+GGG - Chr5:11334085-11334104 None:intergenic 35.0%
!!! AAGTTTTGTTGAACAAAGGG+TGG - Chr5:11334327-11334346 None:intergenic 35.0%
!!! ACAGCCATTCTTGTTTTGTA+TGG + Chr5:11333406-11333425 MsG0580024891.01.T01:CDS 35.0%
!!! AGATTTTTAAGTTGCATGGG+AGG + Chr5:11331335-11331354 MsG0580024891.01.T01:CDS 35.0%
!!! AGTTTTGTTGAACAAAGGGT+GGG - Chr5:11334326-11334345 None:intergenic 35.0%
!!! ATTTTTAAGTTGCATGGGAG+GGG + Chr5:11331337-11331356 MsG0580024891.01.T01:CDS 35.0%
!!! CATGTCATTGTTTTGGTAAG+AGG - Chr5:11332504-11332523 None:intergenic 35.0%
!!! CTTTTTTGTCCTCTTTCTCA+TGG + Chr5:11330889-11330908 MsG0580024891.01.T01:intron 35.0%
!!! GATTTTTAAGTTGCATGGGA+GGG + Chr5:11331336-11331355 MsG0580024891.01.T01:CDS 35.0%
!!! TGGTTGAAGGCATTGAATTT+TGG - Chr5:11332385-11332404 None:intergenic 35.0%
AAATGTCGTCCATGAGAAAG+AGG - Chr5:11330901-11330920 None:intergenic 40.0%
AAGAGTCGAATTTGGAAGCA+AGG - Chr5:11333227-11333246 None:intergenic 40.0%
AATACTCGAGTATGTTCTGC+TGG + Chr5:11331974-11331993 MsG0580024891.01.T01:intron 40.0%
AATTCAATGCCTTCAACCAC+AGG + Chr5:11332386-11332405 MsG0580024891.01.T01:intron 40.0%
AATTGCACTCTCTCTATCAG+AGG + Chr5:11330019-11330038 MsG0580024891.01.T01:CDS 40.0%
ACACAAAACCCCTTTCACAA+TGG - Chr5:11331006-11331025 None:intergenic 40.0%
AGAAGGAATCTGTCAAGTGT+TGG + Chr5:11333701-11333720 MsG0580024891.01.T01:CDS 40.0%
AGCAGGATTTATGGTAAGGA+CGG - Chr5:11331610-11331629 None:intergenic 40.0%
AGTATAGAGCTCATCCTTTC+TGG + Chr5:11332628-11332647 MsG0580024891.01.T01:CDS 40.0%
AGTGTAAAGGAAAACAAGGG+GGG - Chr5:11330871-11330890 None:intergenic 40.0%
ATACTCGAGTATGTTCTGCT+GGG + Chr5:11331975-11331994 MsG0580024891.01.T01:intron 40.0%
ATATATTCTAGTAACCGGCC+TGG + Chr5:11332015-11332034 MsG0580024891.01.T01:intron 40.0%
ATCAGACTCTCCTTTCTATC+TGG + Chr5:11334719-11334738 MsG0580024891.01.T01:three_prime_UTR 40.0%
ATCTAGTAAAAGGGTAGGAG+GGG - Chr5:11334416-11334435 None:intergenic 40.0%
ATCTCATAATGTCTCAGAGG+AGG + Chr5:11330353-11330372 MsG0580024891.01.T01:intron 40.0%
ATGGAAAAGTTCCGGTCAAA+TGG - Chr5:11333980-11333999 None:intergenic 40.0%
ATTCAATGCCTTCAACCACA+GGG + Chr5:11332387-11332406 MsG0580024891.01.T01:intron 40.0%
ATTTCAGGAGGGCAATACAA+TGG + Chr5:11329787-11329806 MsG0580024891.01.T01:CDS 40.0%
CACCATTTACCTGAAACTAG+AGG + Chr5:11333158-11333177 MsG0580024891.01.T01:CDS 40.0%
CAGAGGTTATGATGAGCTAA+AGG + Chr5:11334980-11334999 MsG0580024891.01.T01:three_prime_UTR 40.0%
CAGTATTGCCATTGTGAAAG+GGG + Chr5:11330995-11331014 MsG0580024891.01.T01:intron 40.0%
CATGCATTATCTCATGAGCT+AGG - Chr5:11333542-11333561 None:intergenic 40.0%
CCATCCCGTTGTTACTAATT+AGG + Chr5:11332747-11332766 MsG0580024891.01.T01:intron 40.0%
CCTAATTAGTAACAACGGGA+TGG - Chr5:11332750-11332769 None:intergenic 40.0%
CGGTCAAATGGATATGATCA+AGG - Chr5:11333968-11333987 None:intergenic 40.0%
CTCATGAGATAATGCATGCA+TGG + Chr5:11333544-11333563 MsG0580024891.01.T01:CDS 40.0%
CTGAAAGGCAAGAAAGTTGT+TGG + Chr5:11330047-11330066 MsG0580024891.01.T01:CDS 40.0%
CTGTAGCAGGATTTATGGTA+AGG - Chr5:11331614-11331633 None:intergenic 40.0%
CTTACCATAAATCCTGCTAC+AGG + Chr5:11331612-11331631 MsG0580024891.01.T01:CDS 40.0%
GAAGAAGCAATCTGCTATGA+TGG + Chr5:11335010-11335029 MsG0580024891.01.T01:three_prime_UTR 40.0%
GATGAGCTCTATACTCAATG+AGG - Chr5:11332623-11332642 None:intergenic 40.0%
GCCTTATCGTCCACTTTATT+AGG - Chr5:11330722-11330741 None:intergenic 40.0%
GCTAGTTGCACCTAATAAAG+TGG + Chr5:11330709-11330728 MsG0580024891.01.T01:intron 40.0%
GCTGATGTATGAGAATCTCA+AGG + Chr5:11334905-11334924 MsG0580024891.01.T01:three_prime_UTR 40.0%
GGAAAGACAAGCACTAAATG+AGG + Chr5:11332999-11333018 MsG0580024891.01.T01:CDS 40.0%
GTATTTCATGGTAGAGAGGT+TGG - Chr5:11332921-11332940 None:intergenic 40.0%
GTCCCACATTGGATAACAAA+TGG + Chr5:11331827-11331846 MsG0580024891.01.T01:intron 40.0%
GTGTCTAGACTCAGCAATTA+TGG + Chr5:11332882-11332901 MsG0580024891.01.T01:CDS 40.0%
TAACACTCCATACCAAGATG+AGG - Chr5:11334052-11334071 None:intergenic 40.0%
TATGAACCAATGCCTCATCT+TGG + Chr5:11334037-11334056 MsG0580024891.01.T01:three_prime_UTR 40.0%
TCGTCAAGATGAAGTCATAG+AGG - Chr5:11329137-11329156 None:intergenic 40.0%
TGAAAATATGCCACACAAGC+AGG - Chr5:11329699-11329718 None:intergenic 40.0%
TGAGAATCTCAAGGGGAATA+TGG + Chr5:11334914-11334933 MsG0580024891.01.T01:three_prime_UTR 40.0%
TGCATGATGTTATCAGGGAA+CGG - Chr5:11333592-11333611 None:intergenic 40.0%
TGGTTATCATGTCTGTGACT+CGG - Chr5:11333354-11333373 None:intergenic 40.0%
TGTGTAAAAGAGTCCCACAT+TGG + Chr5:11331816-11331835 MsG0580024891.01.T01:intron 40.0%
TGTTCTGCATCATCGAAGAA+GGG + Chr5:11333810-11333829 MsG0580024891.01.T01:CDS 40.0%
TTCTTCGATGATGCAGAACA+AGG - Chr5:11333810-11333829 None:intergenic 40.0%
TTGAGGCCAGAAATTGAAGA+AGG + Chr5:11333684-11333703 MsG0580024891.01.T01:CDS 40.0%
TTGGAAGCAAGGAATTCCTA+CGG - Chr5:11333216-11333235 None:intergenic 40.0%
TTGTTCTGCATCATCGAAGA+AGG + Chr5:11333809-11333828 MsG0580024891.01.T01:CDS 40.0%
TTGTTGTAGCTGCGAAAGAA+TGG + Chr5:11332695-11332714 MsG0580024891.01.T01:CDS 40.0%
TTTCTAATCTGTGCAGCCAA+AGG + Chr5:11332813-11332832 MsG0580024891.01.T01:intron 40.0%
! AACAACGGGATGGAATGTTT+TGG - Chr5:11332740-11332759 None:intergenic 40.0%
! AATGTGTGCATTCTAAGGGT+TGG - Chr5:11335066-11335085 None:intergenic 40.0%
! ACAACGGGATGGAATGTTTT+GGG - Chr5:11332739-11332758 None:intergenic 40.0%
! CACATTCTTTTCTCCCTCAA+TGG - Chr5:11333025-11333044 None:intergenic 40.0%
! CCTGAACATGTGTTTAGAGT+GGG + Chr5:11331850-11331869 MsG0580024891.01.T01:intron 40.0%
! CCTTCTAGCTAAAATTCAGC+AGG + Chr5:11330461-11330480 MsG0580024891.01.T01:CDS 40.0%
! CGACTGAGTTTTTGTTGGAT+AGG + Chr5:11334169-11334188 MsG0580024891.01.T01:three_prime_UTR 40.0%
! CTATGGAGATGGATTCAGAT+CGG + Chr5:11333905-11333924 MsG0580024891.01.T01:CDS 40.0%
! CTGAACATGTGTTTAGAGTG+GGG + Chr5:11331851-11331870 MsG0580024891.01.T01:intron 40.0%
! CTTTAGCTCATCATAACCTC+TGG - Chr5:11334982-11335001 None:intergenic 40.0%
! GATGAAGCATCCAGATAGAA+AGG - Chr5:11334732-11334751 None:intergenic 40.0%
! GTCCTCTAGTTTCAGGTAAA+TGG - Chr5:11333163-11333182 None:intergenic 40.0%
! TACCAGACACGTTTTCGATA+AGG - Chr5:11329500-11329519 None:intergenic 40.0%
! TATGGAGATGGATTCAGATC+GGG + Chr5:11333906-11333925 MsG0580024891.01.T01:CDS 40.0%
! TGAACATGTGTTTAGAGTGG+GGG + Chr5:11331852-11331871 MsG0580024891.01.T01:intron 40.0%
! TGCTATGATGGGAGAAATGA+TGG + Chr5:11335022-11335041 MsG0580024891.01.T01:three_prime_UTR 40.0%
! TGCTTGTGTGGCATATTTTC+AGG + Chr5:11329698-11329717 MsG0580024891.01.T01:intron 40.0%
! TGTCTTTCCACCAAAAGCAT+AGG - Chr5:11332988-11333007 None:intergenic 40.0%
! TTGATTTGAGAGGATGAAGG+GGG - Chr5:11334084-11334103 None:intergenic 40.0%
!! AGGCCATTTGTTATCCAATG+TGG - Chr5:11331833-11331852 None:intergenic 40.0%
!! GGCCATTTGTTATCCAATGT+GGG - Chr5:11331832-11331851 None:intergenic 40.0%
!! GTCTTCCTCAAGTTGATCTT+TGG - Chr5:11330505-11330524 None:intergenic 40.0%
!! TCAATTTCTGGCCTCAAGTT+GGG - Chr5:11333681-11333700 None:intergenic 40.0%
!! TTCAATTTCTGGCCTCAAGT+TGG - Chr5:11333682-11333701 None:intergenic 40.0%
!! TTGTTTTGTATGGCCTTCCT+AGG + Chr5:11333416-11333435 MsG0580024891.01.T01:CDS 40.0%
!!! CCTGCTGAATTTTAGCTAGA+AGG - Chr5:11330464-11330483 None:intergenic 40.0%
AATTGTGGTGAACTGAGTGC+AGG + Chr5:11329956-11329975 MsG0580024891.01.T01:intron 45.0%
ACCAATGCCTCATCTTGGTA+TGG + Chr5:11334042-11334061 MsG0580024891.01.T01:three_prime_UTR 45.0%
ACCAGGCGGTACTTAAGTAT+GGG + Chr5:11333931-11333950 MsG0580024891.01.T01:CDS 45.0%
AGAAAACCAAGTATAGGGGC+AGG + Chr5:11333325-11333344 MsG0580024891.01.T01:CDS 45.0%
AGAGAATCTTTGCCATGTCG+AGG - Chr5:11330576-11330595 None:intergenic 45.0%
AGATAATGCATGCATGGCTC+AGG + Chr5:11333550-11333569 MsG0580024891.01.T01:CDS 45.0%
AGCACTAAATGAGGCCATTG+AGG + Chr5:11333008-11333027 MsG0580024891.01.T01:CDS 45.0%
CAGAGCTCTATTCTGGATCT+GGG + Chr5:11333742-11333761 MsG0580024891.01.T01:CDS 45.0%
CCCACTCTAAACACATGTTC+AGG - Chr5:11331853-11331872 None:intergenic 45.0%
CGATCTGAATCCATCTCCAT+AGG - Chr5:11333907-11333926 None:intergenic 45.0%
CTAACACAACCCCACAAAAC+CGG - Chr5:11331896-11331915 None:intergenic 45.0%
CTATCAGAGGAGGATCTGAA+AGG + Chr5:11330032-11330051 MsG0580024891.01.T01:CDS 45.0%
CTCCTTATCGAAAACGTGTC+TGG + Chr5:11329495-11329514 MsG0580024891.01.T01:intron 45.0%
CTGAGTGCAGGATGATTTGA+CGG + Chr5:11329968-11329987 MsG0580024891.01.T01:intron 45.0%
GAATTAGCCGGGATCTGTAA+TGG - Chr5:11332594-11332613 None:intergenic 45.0%
GACGAGGAAGATGAGAATGT+TGG + Chr5:11330414-11330433 MsG0580024891.01.T01:CDS 45.0%
GCACTAAATGAGGCCATTGA+GGG + Chr5:11333009-11333028 MsG0580024891.01.T01:CDS 45.0%
GCCTGAACATGTGTTTAGAG+TGG + Chr5:11331849-11331868 MsG0580024891.01.T01:intron 45.0%
GCTGCAATGTACATATGCTC+TGG + Chr5:11331775-11331794 MsG0580024891.01.T01:intron 45.0%
GGATCTGAACAAGCTAGTGA+AGG + Chr5:11334474-11334493 MsG0580024891.01.T01:three_prime_UTR 45.0%
GGGCAATACAATGGCAAACA+TGG + Chr5:11329796-11329815 MsG0580024891.01.T01:CDS 45.0%
GGTGTGTGAGAACATCTTTG+AGG + Chr5:11334453-11334472 MsG0580024891.01.T01:three_prime_UTR 45.0%
GTTAGTGTCCATGTTGTGTC+CGG + Chr5:11329569-11329588 MsG0580024891.01.T01:intron 45.0%
TACCAGGCGGTACTTAAGTA+TGG + Chr5:11333930-11333949 MsG0580024891.01.T01:CDS 45.0%
TCAATTCAGGAACACCCAGT+AGG - Chr5:11329279-11329298 None:intergenic 45.0%
TCAGAGCTCTATTCTGGATC+TGG + Chr5:11333741-11333760 MsG0580024891.01.T01:CDS 45.0%
TCCATACCAAGATGAGGCAT+TGG - Chr5:11334046-11334065 None:intergenic 45.0%
TCTAGTAAAAGGGTAGGAGG+GGG - Chr5:11334415-11334434 None:intergenic 45.0%
TCTCCCTGTAGCAGGATTTA+TGG - Chr5:11331619-11331638 None:intergenic 45.0%
TGATTGGAAGATGGCAAGCA+TGG - Chr5:11331388-11331407 None:intergenic 45.0%
TGCTTTCACAATCTAGCGCT+TGG + Chr5:11333454-11333473 MsG0580024891.01.T01:intron 45.0%
TGTAAACACCGGACACAACA+TGG - Chr5:11329580-11329599 None:intergenic 45.0%
TGTTGCATTCATACTCCCTG+TGG - Chr5:11332405-11332424 None:intergenic 45.0%
TTCATACTCCCTGTGGTTGA+AGG - Chr5:11332398-11332417 None:intergenic 45.0%
TTCGATGATGCAGAACAAGG+CGG - Chr5:11333807-11333826 None:intergenic 45.0%
TTGTAGCTGCGAAAGAATGG+AGG + Chr5:11332698-11332717 MsG0580024891.01.T01:CDS 45.0%
TTTCTCTGCAGAATCTGTGC+TGG + Chr5:11331287-11331306 MsG0580024891.01.T01:intron 45.0%
! AAGCAGAGTCCTCTAGTTTC+AGG - Chr5:11333170-11333189 None:intergenic 45.0%
! CAATAACTGGTCTGGTACTG+TGG + Chr5:11332083-11332102 MsG0580024891.01.T01:intron 45.0%
! GATGATGATGAAGACGAAGG+CGG - Chr5:11333780-11333799 None:intergenic 45.0%
! GCAAGTTCCTATGCTTTTGG+TGG + Chr5:11332978-11332997 MsG0580024891.01.T01:CDS 45.0%
! GCAGCAAGTTCCTATGCTTT+TGG + Chr5:11332975-11332994 MsG0580024891.01.T01:CDS 45.0%
! GTGAGGTATCTGACTCAATC+TGG - Chr5:11333881-11333900 None:intergenic 45.0%
! TGCAAGCAACAAGTGTTGTG+CGG + Chr5:11332547-11332566 MsG0580024891.01.T01:intron 45.0%
! TGTTTTGTGACCTGCTTGTG+TGG + Chr5:11329686-11329705 MsG0580024891.01.T01:intron 45.0%
!! CCTCAAGTTGATCTTTGGCA+CGG - Chr5:11330500-11330519 None:intergenic 45.0%
!! GGTTGATAGTGTTGGTCTCT+CGG + Chr5:11334129-11334148 MsG0580024891.01.T01:three_prime_UTR 45.0%
!! GTCAAGTGTTGGCTCATATG+TGG + Chr5:11333712-11333731 MsG0580024891.01.T01:CDS 45.0%
!!! AATATATGTTTTTTTTTTAT+AGG + Chr5:11333651-11333670 MsG0580024891.01.T01:intron 5.0%
AATCCTGGTGGAAAGAGGTG+GGG - Chr5:11330612-11330631 None:intergenic 50.0%
ACCTCTTTCCACCAGGATTC+AGG + Chr5:11330613-11330632 MsG0580024891.01.T01:CDS 50.0%
ACCTGAATCCTGGTGGAAAG+AGG - Chr5:11330617-11330636 None:intergenic 50.0%
ACGGGTCAGTCTATAAGGCT+TGG - Chr5:11333374-11333393 None:intergenic 50.0%
AGAGAAGAAGCTCAAGCCAG+AGG + Chr5:11334963-11334982 MsG0580024891.01.T01:three_prime_UTR 50.0%
AGGAAGACGAGCAACTTGCA+AGG + Chr5:11330517-11330536 MsG0580024891.01.T01:CDS 50.0%
AGGAATTCCTACGGTGGTGA+CGG - Chr5:11333207-11333226 None:intergenic 50.0%
ATGAGGCCAGCTGAATTAGC+CGG - Chr5:11332606-11332625 None:intergenic 50.0%
ATTCAGATCGGGTTACCAGG+CGG + Chr5:11333917-11333936 MsG0580024891.01.T01:CDS 50.0%
CATCGACGGGTCAGTCTATA+AGG - Chr5:11333379-11333398 None:intergenic 50.0%
CATGCATGGCTCAGGCTTAA+AGG + Chr5:11333558-11333577 MsG0580024891.01.T01:CDS 50.0%
CCGTGCCAAAGATCAACTTG+AGG + Chr5:11330497-11330516 MsG0580024891.01.T01:CDS 50.0%
CTGAATCCATCTCCATAGGC+TGG - Chr5:11333903-11333922 None:intergenic 50.0%
CTTTCGCAGCTACAACAACG+AGG - Chr5:11332693-11332712 None:intergenic 50.0%
GAAGATGGCAAGCATGGCAT+TGG - Chr5:11331382-11331401 None:intergenic 50.0%
GAAGCAAGGAATTCCTACGG+TGG - Chr5:11333213-11333232 None:intergenic 50.0%
GAATCCTGGTGGAAAGAGGT+GGG - Chr5:11330613-11330632 None:intergenic 50.0%
GAATCTTTGCCATGTCGAGG+AGG - Chr5:11330573-11330592 None:intergenic 50.0%
GCTGGATGCAATGCTGAGAT+TGG + Chr5:11331305-11331324 MsG0580024891.01.T01:CDS 50.0%
GGAAGACGAGCAACTTGCAA+GGG + Chr5:11330518-11330537 MsG0580024891.01.T01:CDS 50.0%
GTAAGGACGGTTGCTAGACA+TGG - Chr5:11331597-11331616 None:intergenic 50.0%
GTCTGGTATCCGACATGTGT+TGG + Chr5:11329512-11329531 MsG0580024891.01.T01:intron 50.0%
TCAGATACCTCACCAGCCTA+TGG + Chr5:11333888-11333907 MsG0580024891.01.T01:CDS 50.0%
TCCAACTCATGAAGGGATCC+AGG - Chr5:11332036-11332055 None:intergenic 50.0%
TGAATCCTGGTGGAAAGAGG+TGG - Chr5:11330614-11330633 None:intergenic 50.0%
TGCACTCTCTCTATCAGAGG+AGG + Chr5:11330022-11330041 MsG0580024891.01.T01:CDS 50.0%
TGGATTCAGATCGGGTTACC+AGG + Chr5:11333914-11333933 MsG0580024891.01.T01:CDS 50.0%
! TGCAATGCTGAGATTGGCCA+TGG + Chr5:11331311-11331330 MsG0580024891.01.T01:CDS 50.0%
!! ACCTCACAAGCCGGTTTTGT+GGG + Chr5:11331883-11331902 MsG0580024891.01.T01:intron 50.0%
!! CGGTTTTGTGGGGTTGTGTT+AGG + Chr5:11331894-11331913 MsG0580024891.01.T01:intron 50.0%
!! GCATGGCATTGGAAGCATTG+TGG - Chr5:11331371-11331390 None:intergenic 50.0%
ACCTCACCAGCCTATGGAGA+TGG + Chr5:11333894-11333913 MsG0580024891.01.T01:CDS 55.0%
ACTCATGAAGGGATCCAGGC+CGG - Chr5:11332032-11332051 None:intergenic 55.0%
AGAGGATGAAGGGGGCTAGA+TGG - Chr5:11334076-11334095 None:intergenic 55.0%
CAGATCCCGGCTAATTCAGC+TGG + Chr5:11332597-11332616 MsG0580024891.01.T01:intron 55.0%
GAACAAACCGTCACCACCGT+AGG + Chr5:11333197-11333216 MsG0580024891.01.T01:intron 55.0%
GAGGATGAAGGGGGCTAGAT+GGG - Chr5:11334075-11334094 None:intergenic 55.0%
GCAATCCTCACCTCACAAGC+CGG + Chr5:11331874-11331893 MsG0580024891.01.T01:intron 55.0%
GCCTGGATCCCTTCATGAGT+TGG + Chr5:11332032-11332051 MsG0580024891.01.T01:intron 55.0%
GTGATGCTTCTCCCTGTAGC+AGG - Chr5:11331627-11331646 None:intergenic 55.0%
TAAGTTGCATGGGAGGGGTC+TGG + Chr5:11331342-11331361 MsG0580024891.01.T01:CDS 55.0%
TCCATCTCCATAGGCTGGTG+AGG - Chr5:11333898-11333917 None:intergenic 55.0%
TGAGGCCAGCTGAATTAGCC+GGG - Chr5:11332605-11332624 None:intergenic 55.0%
TGCTGTCGAGCTCATGCGTT+GGG - Chr5:11332668-11332687 None:intergenic 55.0%
! ACTGGTTCTCCTCCTCGACA+TGG + Chr5:11330561-11330580 MsG0580024891.01.T01:CDS 55.0%
! GCCCATACTTAAGTACCGCC+TGG - Chr5:11333935-11333954 None:intergenic 55.0%
! TGGCTGTCACTTCGCATCGA+CGG - Chr5:11333393-11333412 None:intergenic 55.0%
!! CAAAACCGGCTTGTGAGGTG+AGG - Chr5:11331882-11331901 None:intergenic 55.0%
!! CACCTCACAAGCCGGTTTTG+TGG + Chr5:11331882-11331901 MsG0580024891.01.T01:intron 55.0%
!! CCTCACAAGCCGGTTTTGTG+GGG + Chr5:11331884-11331903 MsG0580024891.01.T01:intron 55.0%
CGGTGTCCTGCCCCTATACT+TGG - Chr5:11333334-11333353 None:intergenic 60.0%
GGTGGAAAGAGGTGGGGAGA+AGG - Chr5:11330606-11330625 None:intergenic 60.0%
GTGCTGTCGAGCTCATGCGT+TGG - Chr5:11332669-11332688 None:intergenic 60.0%
TCTCCCCACCTCTTTCCACC+AGG + Chr5:11330606-11330625 MsG0580024891.01.T01:CDS 60.0%
! GGCTGTCACTTCGCATCGAC+GGG - Chr5:11333392-11333411 None:intergenic 60.0%
!! CCCCACAAAACCGGCTTGTG+AGG - Chr5:11331887-11331906 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
Chr5 gene 11329102 11335232 11329102 ID=MsG0580024891.01;Name=MsG0580024891.01
Chr5 mRNA 11329102 11335232 11329102 ID=MsG0580024891.01.T01;Parent=MsG0580024891.01;Name=MsG0580024891.01.T01;_AED=0.39;_eAED=0.39;_QI=243|1|1|1|0.54|0.66|12|1228|525
Chr5 exon 11329102 11329319 11329102 ID=MsG0580024891.01.T01:exon:3094;Parent=MsG0580024891.01.T01
Chr5 exon 11329720 11329855 11329720 ID=MsG0580024891.01.T01:exon:3095;Parent=MsG0580024891.01.T01
Chr5 exon 11329978 11330068 11329978 ID=MsG0580024891.01.T01:exon:3096;Parent=MsG0580024891.01.T01
Chr5 exon 11331590 11331673 11331590 ID=MsG0580024891.01.T01:exon:3099;Parent=MsG0580024891.01.T01
Chr5 exon 11332600 11332719 11332600 ID=MsG0580024891.01.T01:exon:3100;Parent=MsG0580024891.01.T01
Chr5 exon 11332829 11333041 11332829 ID=MsG0580024891.01.T01:exon:3101;Parent=MsG0580024891.01.T01
Chr5 exon 11333152 11333214 11333152 ID=MsG0580024891.01.T01:exon:3102;Parent=MsG0580024891.01.T01
Chr5 exon 11333319 11333437 11333319 ID=MsG0580024891.01.T01:exon:3103;Parent=MsG0580024891.01.T01
Chr5 five_prime_UTR 11329102 11329319 11329102 ID=MsG0580024891.01.T01:five_prime_utr;Parent=MsG0580024891.01.T01
Chr5 five_prime_UTR 11329720 11329744 11329720 ID=MsG0580024891.01.T01:five_prime_utr;Parent=MsG0580024891.01.T01
Chr5 CDS 11329745 11329855 11329745 ID=MsG0580024891.01.T01:cds;Parent=MsG0580024891.01.T01
Chr5 CDS 11329978 11330068 11329978 ID=MsG0580024891.01.T01:cds;Parent=MsG0580024891.01.T01
Chr5 CDS 11330370 11330634 11330370 ID=MsG0580024891.01.T01:cds;Parent=MsG0580024891.01.T01
Chr5 CDS 11331298 11331418 11331298 ID=MsG0580024891.01.T01:cds;Parent=MsG0580024891.01.T01
Chr5 CDS 11331590 11331673 11331590 ID=MsG0580024891.01.T01:cds;Parent=MsG0580024891.01.T01
Chr5 CDS 11332600 11332719 11332600 ID=MsG0580024891.01.T01:cds;Parent=MsG0580024891.01.T01
Chr5 CDS 11332829 11333041 11332829 ID=MsG0580024891.01.T01:cds;Parent=MsG0580024891.01.T01
Chr5 CDS 11333152 11333214 11333152 ID=MsG0580024891.01.T01:cds;Parent=MsG0580024891.01.T01
Chr5 CDS 11333319 11333437 11333319 ID=MsG0580024891.01.T01:cds;Parent=MsG0580024891.01.T01
Chr5 CDS 11333521 11333579 11333521 ID=MsG0580024891.01.T01:cds;Parent=MsG0580024891.01.T01
Chr5 CDS 11333673 11334004 11333673 ID=MsG0580024891.01.T01:cds;Parent=MsG0580024891.01.T01
Chr5 three_prime_UTR 11334005 11335232 11334005 ID=MsG0580024891.01.T01:three_prime_utr;Parent=MsG0580024891.01.T01
Chr5 mRNA 11329697 11333218 11329697 ID=MsG0580024891.01.T02;Parent=MsG0580024891.01;Name=MsG0580024891.01.T02;_AED=0.45;_eAED=0.52;_QI=0|0.5|0.22|1|0.62|0.33|9|0|485
Chr5 exon 11329697 11329855 11329697 ID=MsG0580024891.01.T02:exon:3106;Parent=MsG0580024891.01.T02
Chr5 exon 11329978 11330093 11329978 ID=MsG0580024891.01.T02:exon:3107;Parent=MsG0580024891.01.T02
Chr5 exon 11330182 11330234 11330182 ID=MsG0580024891.01.T02:exon:3108;Parent=MsG0580024891.01.T02
Chr5 exon 11331590 11331905 11331590 ID=MsG0580024891.01.T02:exon:3109;Parent=MsG0580024891.01.T02
Chr5 exon 11332574 11332719 11332574 ID=MsG0580024891.01.T02:exon:3110;Parent=MsG0580024891.01.T02
Chr5 exon 11332829 11333043 11332829 ID=MsG0580024891.01.T02:exon:3111;Parent=MsG0580024891.01.T02
Chr5 exon 11333152 11333218 11333152 ID=MsG0580024891.01.T02:exon:3112;Parent=MsG0580024891.01.T02
Chr5 CDS 11329697 11329855 11329697 ID=MsG0580024891.01.T02:cds;Parent=MsG0580024891.01.T02
Chr5 CDS 11329978 11330093 11329978 ID=MsG0580024891.01.T02:cds;Parent=MsG0580024891.01.T02
Chr5 CDS 11330182 11330234 11330182 ID=MsG0580024891.01.T02:cds;Parent=MsG0580024891.01.T02
Chr5 CDS 11330370 11330634 11330370 ID=MsG0580024891.01.T02:cds;Parent=MsG0580024891.01.T02
Chr5 CDS 11331298 11331418 11331298 ID=MsG0580024891.01.T02:cds;Parent=MsG0580024891.01.T02
Chr5 CDS 11331590 11331905 11331590 ID=MsG0580024891.01.T02:cds;Parent=MsG0580024891.01.T02
Chr5 CDS 11332574 11332719 11332574 ID=MsG0580024891.01.T02:cds;Parent=MsG0580024891.01.T02
Chr5 CDS 11332829 11333043 11332829 ID=MsG0580024891.01.T02:cds;Parent=MsG0580024891.01.T02
Chr5 CDS 11333152 11333218 11333152 ID=MsG0580024891.01.T02:cds;Parent=MsG0580024891.01.T02
Chr5 mRNA 11333028 11335232 11333028 ID=MsG0580024891.01.T03;Parent=MsG0580024891.01;Name=MsG0580024891.01.T03;_AED=0.43;_eAED=0.43;_QI=336|1|1|1|1|1|3|1228|154
Chr5 exon 11333028 11333437 11333028 ID=MsG0580024891.01.T03:exon:3113;Parent=MsG0580024891.01.T03
Chr5 five_prime_UTR 11333028 11333363 11333028 ID=MsG0580024891.01.T03:five_prime_utr;Parent=MsG0580024891.01.T03
Chr5 CDS 11333364 11333437 11333364 ID=MsG0580024891.01.T03:cds;Parent=MsG0580024891.01.T03
Chr5 CDS 11333521 11333579 11333521 ID=MsG0580024891.01.T03:cds;Parent=MsG0580024891.01.T03
Chr5 CDS 11333673 11334004 11333673 ID=MsG0580024891.01.T03:cds;Parent=MsG0580024891.01.T03
Chr5 three_prime_UTR 11334005 11335232 11334005 ID=MsG0580024891.01.T03:three_prime_utr;Parent=MsG0580024891.01.T03
Gene Sequence

>MsG0580024891.01.T03

ATGATAACCAAGCCTTATAGACTGACCCGTCGATGCGAAGTGACAGCCATTCTTGTTTTGTATGGCCTTCCTAGATTGTTGACAGGATCAATCCTAGCTCATGAGATAATGCATGCATGGCTCAGGCTTAAAGGTTATCCCAACTTGAGGCCAGAAATTGAAGAAGGAATCTGTCAAGTGTTGGCTCATATGTGGTTAGAATCAGAGCTCTATTCTGGATCTGGGAATAATGATGCACCGCCTTCGTCTTCATCATCATCAATGCCGCCTTGTTCTGCATCATCGAAGAAGGGTAAACGATCTGATTTTGAGAAGAAACTTGGCGAGTTTTTCAAAAACCAGATTGAGTCAGATACCTCACCAGCCTATGGAGATGGATTCAGATCGGGTTACCAGGCGGTACTTAAGTATGGGCTCAAAAGTACCCTTGATCATATCCATTTGACCGGAACTTTTCCATGTTGA

>MsG0580024891.01.T01

ATGGGTTGGTTTACAAAGTTTCTCAATGGCTCTAATCATAGAATTTCAGGAGGGCAATACAATGGCAAACATGGTGATGATAGAATTTGGGATAATCATCATAGTTCAGTGGATGATTTGACGGATGTCGAAAAAGAAGACATTGATCGTGCAATTGCACTCTCTCTATCAGAGGAGGATCTGAAAGGCAAGAAAGTTGTTGAGGAGGATTCGCAGTCTGAAGAAGACGAACAACTTTGTAAAATTGACGAGGAAGATGAGAATGTTGGTAAAGTTCGACAAGATGAAGATGACCTTCTAGCTAAAATTCAGCAGGCTGAAAATGAACGCCGTGCCAAAGATCAACTTGAGGAAGACGAGCAACTTGCAAGGGCAATTCAATTAAGTTTGAGCACTGGTTCTCCTCCTCGACATGGCAAAGATTCTCTATCTCTACCTTCTCCCCACCTCTTTCCACCAGGATTCAGAATCTGTGCTGGATGCAATGCTGAGATTGGCCATGGAAGATTTTTAAGTTGCATGGGAGGGGTCTGGCATCCACAATGCTTCCAATGCCATGCTTGCCATCTTCCAATCACTGATTATGAGTTTTCCATGTCTAGCAACCGTCCTTACCATAAATCCTGCTACAGGGAGAAGCATCACCCAAGATGTGATGTTTGCAAGAATTTTATCCCGGCTAATTCAGCTGGCCTCATTGAGTATAGAGCTCATCCTTTCTGGATACAAAAATACTGCCCAACGCATGAGCTCGACAGCACTCCTCGTTGTTGTAGCTGCGAAAGAATGGAGCCAAAGGATTCAAAATATCTTTTTCTTGATGATGGTCGAAAGCTATGTCTCGAGTGTCTAGACTCAGCAATTATGGACAGTCATGAATGCCAACCTCTCTACCATGAAATACTAGAATTTTATGAAGGTTTAAATATGAAAGTGAAGCAGCAAGTTCCTATGCTTTTGGTGGAAAGACAAGCACTAAATGAGGCCATTGAGGGAGAAAAGAATGGTCATCACCATTTACCTGAAACTAGAGGACTCTGCTTGTCAGAAGAACAAACCGTCACCACCATTTTAAGAAAACCAAGTATAGGGGCAGGACACCGAGTCACAGACATGATAACCAAGCCTTATAGACTGACCCGTCGATGCGAAGTGACAGCCATTCTTGTTTTGTATGGCCTTCCTAGATTGTTGACAGGATCAATCCTAGCTCATGAGATAATGCATGCATGGCTCAGGCTTAAAGGTTATCCCAACTTGAGGCCAGAAATTGAAGAAGGAATCTGTCAAGTGTTGGCTCATATGTGGTTAGAATCAGAGCTCTATTCTGGATCTGGGAATAATGATGCACCGCCTTCGTCTTCATCATCATCAATGCCGCCTTGTTCTGCATCATCGAAGAAGGGTAAACGATCTGATTTTGAGAAGAAACTTGGCGAGTTTTTCAAAAACCAGATTGAGTCAGATACCTCACCAGCCTATGGAGATGGATTCAGATCGGGTTACCAGGCGGTACTTAAGTATGGGCTCAAAAGTACCCTTGATCATATCCATTTGACCGGAACTTTTCCATGTTGA

>MsG0580024891.01.T02

CTGCTTGTGTGGCATATTTTCAGGAAAAAGGGAATAATTTTGTGTAATATGGGTTGGTTTACAAAGTTTCTCAATGGCTCTAATCATAGAATTTCAGGAGGGCAATACAATGGCAAACATGGTGATGATAGAATTTGGGATAATCATCATAGTTCAGTGGATGATTTGACGGATGTCGAAAAAGAAGACATTGATCGTGCAATTGCACTCTCTCTATCAGAGGAGGATCTGAAAGGCAAGAAAGTTGTTGGTAAGATTTACACTTTTGTACATTTTGTTTCATTTCAGTTAAGTTCCAACTCAAAGTGGGTAACATATGTTTCTAATGAGGAGGATTCGCAGTCTGAAGAAGACGAACAACTTTGTAAAATTGACGAGGAAGATGAGAATGTTGGTAAAGTTCGACAAGATGAAGATGACCTTCTAGCTAAAATTCAGCAGGCTGAAAATGAACGCCGTGCCAAAGATCAACTTGAGGAAGACGAGCAACTTGCAAGGGCAATTCAATTAAGTTTGAGCACTGGTTCTCCTCCTCGACATGGCAAAGATTCTCTATCTCTACCTTCTCCCCACCTCTTTCCACCAGGATTCAGAATCTGTGCTGGATGCAATGCTGAGATTGGCCATGGAAGATTTTTAAGTTGCATGGGAGGGGTCTGGCATCCACAATGCTTCCAATGCCATGCTTGCCATCTTCCAATCACTGATTATGAGTTTTCCATGTCTAGCAACCGTCCTTACCATAAATCCTGCTACAGGGAGAAGCATCACCCAAGATGTGATGTTTGCAAGAATTTTGTAAGTATCTCAGCAGAAATCTTTCACTTGCAGTTGTCTATTAGAGTTTTTCAATTTACTATCAAAGTAGTCTCTTATCATGGACATGCTTTTGAAATTTCGCTGCAATGTACATATGCTCTGGCTAGTAATGATATTGAGCTGTGTAAAAGAGTCCCACATTGGATAACAAATGGCCTGAACATGTGTTTAGAGTGGGGGCAATCCTCACCTCACAAGCCGGTTTTGTGGGCAAATTTTTTTATTCTTCCATTACAGATCCCGGCTAATTCAGCTGGCCTCATTGAGTATAGAGCTCATCCTTTCTGGATACAAAAATACTGCCCAACGCATGAGCTCGACAGCACTCCTCGTTGTTGTAGCTGCGAAAGAATGGAGCCAAAGGATTCAAAATATCTTTTTCTTGATGATGGTCGAAAGCTATGTCTCGAGTGTCTAGACTCAGCAATTATGGACAGTCATGAATGCCAACCTCTCTACCATGAAATACTAGAATTTTATGAAGGTTTAAATATGAAAGTGAAGCAGCAAGTTCCTATGCTTTTGGTGGAAAGACAAGCACTAAATGAGGCCATTGAGGGAGAAAAGAATGTGGTCATCACCATTTACCTGAAACTAGAGGACTCTGCTTGTCAGAAGAACAAACCGTCACCACCGTAG
Protein sequence

>MsG0580024891.01.T03

MITKPYRLTRRCEVTAILVLYGLPRLLTGSILAHEIMHAWLRLKGYPNLRPEIEEGICQVLAHMWLESELYSGSGNNDAPPSSSSSSMPPCSASSKKGKRSDFEKKLGEFFKNQIESDTSPAYGDGFRSGYQAVLKYGLKSTLDHIHLTGTFPC*

>MsG0580024891.01.T01

MGWFTKFLNGSNHRISGGQYNGKHGDDRIWDNHHSSVDDLTDVEKEDIDRAIALSLSEEDLKGKKVVEEDSQSEEDEQLCKIDEEDENVGKVRQDEDDLLAKIQQAENERRAKDQLEEDEQLARAIQLSLSTGSPPRHGKDSLSLPSPHLFPPGFRICAGCNAEIGHGRFLSCMGGVWHPQCFQCHACHLPITDYEFSMSSNRPYHKSCYREKHHPRCDVCKNFIPANSAGLIEYRAHPFWIQKYCPTHELDSTPRCCSCERMEPKDSKYLFLDDGRKLCLECLDSAIMDSHECQPLYHEILEFYEGLNMKVKQQVPMLLVERQALNEAIEGEKNGHHHLPETRGLCLSEEQTVTTILRKPSIGAGHRVTDMITKPYRLTRRCEVTAILVLYGLPRLLTGSILAHEIMHAWLRLKGYPNLRPEIEEGICQVLAHMWLESELYSGSGNNDAPPSSSSSSMPPCSASSKKGKRSDFEKKLGEFFKNQIESDTSPAYGDGFRSGYQAVLKYGLKSTLDHIHLTGTFPC*

>MsG0580024891.01.T02

LLVWHIFRKKGIILCNMGWFTKFLNGSNHRISGGQYNGKHGDDRIWDNHHSSVDDLTDVEKEDIDRAIALSLSEEDLKGKKVVGKIYTFVHFVSFQLSSNSKWVTYVSNEEDSQSEEDEQLCKIDEEDENVGKVRQDEDDLLAKIQQAENERRAKDQLEEDEQLARAIQLSLSTGSPPRHGKDSLSLPSPHLFPPGFRICAGCNAEIGHGRFLSCMGGVWHPQCFQCHACHLPITDYEFSMSSNRPYHKSCYREKHHPRCDVCKNFVSISAEIFHLQLSIRVFQFTIKVVSYHGHAFEISLQCTYALASNDIELCKRVPHWITNGLNMCLEWGQSSPHKPVLWANFFILPLQIPANSAGLIEYRAHPFWIQKYCPTHELDSTPRCCSCERMEPKDSKYLFLDDGRKLCLECLDSAIMDSHECQPLYHEILEFYEGLNMKVKQQVPMLLVERQALNEAIEGEKNVVITIYLKLEDSACQKNKPSPP*