AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0580026147.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580026147.01.T01 MTR_5g040420 92.768 401 17 3 7 405 1 391 0.0 744
MsG0580026147.01.T01 MTR_8g467490 63.700 427 95 14 7 405 1 395 2.18e-175 495
MsG0580026147.01.T01 MTR_6g011860 48.260 431 151 16 7 405 1 391 5.50e-117 346
MsG0580026147.01.T01 MTR_5g090970 66.474 173 54 3 12 181 10 181 4.75e-78 244
MsG0580026147.01.T01 MTR_2g068880 56.621 219 79 6 5 209 9 225 3.77e-76 239
MsG0580026147.01.T01 MTR_5g090970 65.896 173 54 4 12 181 10 180 7.15e-76 238
MsG0580026147.01.T01 MTR_2g068920 61.453 179 55 4 17 185 18 192 3.82e-73 231
MsG0580026147.01.T01 MTR_4g089135 50.838 179 71 2 20 182 15 192 2.95e-61 201
MsG0580026147.01.T01 MTR_2g080010 52.381 168 67 2 22 181 17 179 2.27e-60 199
MsG0580026147.01.T01 MTR_4g134460 54.938 162 62 3 18 179 52 202 1.30e-59 200
MsG0580026147.01.T01 MTR_7g085220 46.919 211 92 4 22 225 10 207 1.47e-59 197
MsG0580026147.01.T01 MTR_2g093810 51.744 172 79 2 7 178 1 168 7.93e-59 194
MsG0580026147.01.T01 MTR_3g088110 39.394 264 134 7 22 275 9 256 1.84e-58 192
MsG0580026147.01.T01 MTR_2157s0010 42.672 232 117 5 22 240 10 238 2.76e-58 191
MsG0580026147.01.T01 MTR_5g041940 53.988 163 65 3 22 182 5 159 2.64e-57 189
MsG0580026147.01.T01 MTR_8g094580 53.503 157 66 2 22 178 9 158 6.65e-56 186
MsG0580026147.01.T01 MTR_2g079990 53.039 181 74 5 22 202 18 187 7.34e-56 188
MsG0580026147.01.T01 MTR_7g100990 53.125 160 71 2 22 181 13 168 9.60e-55 184
MsG0580026147.01.T01 MTR_4g081870 54.037 161 64 3 22 180 11 163 1.02e-54 182
MsG0580026147.01.T01 MTR_4g036030 48.256 172 74 3 20 188 7 166 1.31e-53 182
MsG0580026147.01.T01 MTR_8g059170 53.614 166 68 4 22 187 16 172 2.18e-53 181
MsG0580026147.01.T01 MTR_3g096920 52.229 157 67 2 22 178 9 157 2.54e-53 179
MsG0580026147.01.T01 MTR_2g079990 48.259 201 81 4 22 202 18 215 2.67e-53 182
MsG0580026147.01.T01 MTR_8g076110 36.364 264 142 5 16 269 2 249 4.71e-53 179
MsG0580026147.01.T01 MTR_5g021710 45.161 186 85 5 14 194 2 175 5.22e-52 177
MsG0580026147.01.T01 MTR_5g012080 47.126 174 79 3 20 190 7 170 5.55e-52 177
MsG0580026147.01.T01 MTR_4g108760 49.153 177 76 4 14 188 13 177 1.16e-51 177
MsG0580026147.01.T01 MTR_3g435150 50.549 182 80 4 14 195 10 181 1.50e-51 175
MsG0580026147.01.T01 MTR_2g064090 51.250 160 67 4 22 179 8 158 3.87e-51 175
MsG0580026147.01.T01 MTR_4g101680 47.337 169 74 3 20 185 7 163 4.32e-51 176
MsG0580026147.01.T01 MTR_3g096920 58.140 129 51 1 22 150 9 134 1.33e-50 173
MsG0580026147.01.T01 MTR_6g012670 53.459 159 66 3 22 180 22 172 5.50e-50 171
MsG0580026147.01.T01 MTR_4g075980 46.552 174 76 3 17 186 12 172 2.99e-49 169
MsG0580026147.01.T01 MTR_2g078700 48.485 165 79 2 17 181 20 178 4.53e-49 171
MsG0580026147.01.T01 MTR_6g477900 42.857 189 95 4 22 208 8 185 6.44e-49 166
MsG0580026147.01.T01 MTR_4g035590 49.390 164 67 3 20 180 8 158 2.36e-48 168
MsG0580026147.01.T01 MTR_6g032770 46.667 180 84 4 15 190 11 182 2.65e-48 169
MsG0580026147.01.T01 MTR_7g085260 46.703 182 85 4 11 188 8 181 2.88e-48 169
MsG0580026147.01.T01 MTR_6g084430 35.069 288 151 5 16 303 1 252 3.09e-48 167
MsG0580026147.01.T01 MTR_3g064580 43.915 189 92 6 22 208 8 184 6.07e-48 173
MsG0580026147.01.T01 MTR_3g109340 45.763 177 84 2 6 181 8 173 6.86e-48 167
MsG0580026147.01.T01 MTR_3g109340 46.591 176 85 2 6 181 8 174 8.14e-48 167
MsG0580026147.01.T01 MTR_7g005280 48.603 179 78 3 7 184 1 166 2.31e-47 162
MsG0580026147.01.T01 MTR_1g096430 42.703 185 90 4 16 197 3 174 2.49e-47 165
MsG0580026147.01.T01 MTR_2g062730 41.799 189 94 4 19 202 9 186 1.60e-46 163
MsG0580026147.01.T01 MTR_1g008740 45.143 175 85 3 6 179 14 178 1.77e-46 163
MsG0580026147.01.T01 MTR_5g076850 46.250 160 74 3 22 179 8 157 2.92e-46 168
MsG0580026147.01.T01 MTR_5g014300 47.619 168 66 5 20 178 6 160 4.05e-46 162
MsG0580026147.01.T01 MTR_1g008740 44.828 174 85 3 7 179 1 164 1.01e-45 161
MsG0580026147.01.T01 MTR_8g024480 46.429 168 78 4 20 180 15 177 1.35e-45 163
MsG0580026147.01.T01 MTR_4g098630 47.647 170 78 4 22 188 8 169 1.62e-45 159
MsG0580026147.01.T01 MTR_3g070030 45.783 166 83 3 23 188 22 180 4.73e-45 159
MsG0580026147.01.T01 MTR_5g069030 48.148 162 72 4 23 182 28 179 4.77e-45 165
MsG0580026147.01.T01 MTR_3g093050 41.546 207 100 6 23 225 25 214 3.66e-44 162
MsG0580026147.01.T01 MTR_3g116070 52.448 143 66 2 9 149 11 153 4.12e-44 157
MsG0580026147.01.T01 MTR_3g093050 41.546 207 100 6 23 225 25 214 5.55e-44 162
MsG0580026147.01.T01 MTR_1g069805 36.697 218 116 4 22 237 12 209 6.21e-44 154
MsG0580026147.01.T01 MTR_7g011130 48.503 167 73 5 23 180 22 184 6.93e-44 156
MsG0580026147.01.T01 MTR_3g096140 44.172 163 79 4 18 178 5 157 9.60e-44 154
MsG0580026147.01.T01 MTR_2g064470 45.087 173 84 4 16 188 7 168 1.07e-43 154
MsG0580026147.01.T01 MTR_1g097300 45.963 161 75 3 21 179 20 170 1.47e-43 160
MsG0580026147.01.T01 MTR_7g011120 46.584 161 79 3 23 180 11 167 1.94e-43 154
MsG0580026147.01.T01 MTR_3g096140 44.172 163 79 4 18 178 5 157 4.52e-43 154
MsG0580026147.01.T01 MTR_8g063550 44.099 161 78 4 20 178 6 156 6.36e-43 153
MsG0580026147.01.T01 MTR_8g063550 41.040 173 90 4 20 190 6 168 9.01e-43 155
MsG0580026147.01.T01 MTR_8g063550 44.099 161 78 4 20 178 6 156 1.08e-42 155
MsG0580026147.01.T01 MTR_3g093040 41.860 172 87 5 16 184 103 264 4.69e-42 150
MsG0580026147.01.T01 MTR_1g090723 44.785 163 77 5 22 181 10 162 6.72e-41 153
MsG0580026147.01.T01 MTR_8g093580 39.306 173 93 3 20 190 6 168 6.77e-41 151
MsG0580026147.01.T01 MTR_7g097090 41.935 155 78 1 22 176 12 154 8.02e-41 146
MsG0580026147.01.T01 MTR_1g090720 43.860 171 74 4 20 180 42 200 2.55e-40 149
MsG0580026147.01.T01 MTR_1g090723 44.172 163 77 5 22 181 10 161 3.94e-40 151
MsG0580026147.01.T01 MTR_1g090723 44.172 163 77 5 22 181 10 161 5.11e-40 150
MsG0580026147.01.T01 MTR_8g099750 44.805 154 80 2 22 175 16 164 4.08e-39 140
MsG0580026147.01.T01 MTR_0036s0150 44.785 163 76 6 22 181 7 158 7.74e-39 146
MsG0580026147.01.T01 MTR_2g086880 40.230 174 82 5 20 188 18 174 1.83e-36 140
MsG0580026147.01.T01 MTR_2g086880 40.230 174 82 5 20 188 18 174 1.97e-36 139
MsG0580026147.01.T01 MTR_3g098810 42.515 167 90 3 22 186 16 178 4.94e-36 132
MsG0580026147.01.T01 MTR_3g070040 41.358 162 86 4 24 185 12 164 6.31e-34 129
MsG0580026147.01.T01 MTR_3g098810 45.205 146 76 2 7 150 1 144 1.29e-33 124
MsG0580026147.01.T01 MTR_8g023840 45.865 133 68 3 23 152 14 145 1.95e-33 129
MsG0580026147.01.T01 MTR_4g052620 44.118 136 70 3 16 146 1 135 3.49e-33 125
MsG0580026147.01.T01 MTR_3g096140 41.379 145 73 4 36 178 2 136 4.00e-33 127
MsG0580026147.01.T01 MTR_2g086690 46.617 133 60 5 22 146 6 135 2.21e-32 123
MsG0580026147.01.T01 MTR_8g094580 51.351 111 47 2 68 178 1 104 2.47e-32 122
MsG0580026147.01.T01 MTR_7g105170 36.585 164 94 5 22 179 6 165 3.87e-32 122
MsG0580026147.01.T01 MTR_8g023860 46.269 134 67 4 16 146 9 140 6.83e-32 125
MsG0580026147.01.T01 MTR_8g023900 31.933 238 131 5 1 221 160 383 1.31e-29 120
MsG0580026147.01.T01 MTR_8g023900 36.196 163 88 5 21 179 12 162 8.85e-27 112
MsG0580026147.01.T01 MTR_4g094302 36.943 157 89 2 22 178 13 159 2.28e-29 113
MsG0580026147.01.T01 MTR_8g023930 28.866 291 169 8 20 297 23 288 1.06e-27 114
MsG0580026147.01.T01 MTR_4g094302 40.476 126 67 1 22 147 13 130 5.28e-27 105
MsG0580026147.01.T01 MTR_8g023880 32.258 186 88 8 23 190 10 175 1.14e-19 88.6
MsG0580026147.01.T01 MTR_8g093790 33.533 167 81 6 22 188 12 148 1.56e-19 86.3
MsG0580026147.01.T01 MTR_7g070140 46.753 77 41 0 73 149 17 93 1.75e-19 84.7
MsG0580026147.01.T01 MTR_7g083330 34.058 138 84 5 17 151 14 147 8.64e-18 81.3
MsG0580026147.01.T01 MTR_7g083360 32.374 139 87 5 18 153 7 141 1.23e-16 77.0
MsG0580026147.01.T01 MTR_7g083370 31.746 126 78 5 23 145 13 133 7.94e-16 74.3
MsG0580026147.01.T01 MTR_3g096400 30.247 162 97 6 22 177 9 160 7.99e-15 73.2
MsG0580026147.01.T01 MTR_1g087190 60.870 46 17 1 22 66 7 52 9.11e-14 65.9
MsG0580026147.01.T01 MTR_7g070150 41.026 78 35 1 113 190 3 69 4.28e-13 65.1
MsG0580026147.01.T01 MTR_7g116460 27.907 172 103 7 26 189 11 169 9.68e-11 61.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580026147.01.T01 AT1G26870 55.657 327 122 8 8 319 3 321 9.33e-111 331
MsG0580026147.01.T01 AT5G39820 67.327 202 52 3 5 192 5 206 7.59e-99 298
MsG0580026147.01.T01 AT2G43000 62.295 183 52 4 3 185 7 172 2.74e-76 238
MsG0580026147.01.T01 AT3G12910 46.484 256 127 5 12 260 13 265 8.87e-67 214
MsG0580026147.01.T01 AT2G02450 55.625 160 60 3 19 178 50 198 4.47e-60 199
MsG0580026147.01.T01 AT2G02450 55.625 160 60 3 19 178 50 198 5.87e-60 200
MsG0580026147.01.T01 AT3G04070 54.217 166 68 3 22 182 12 174 8.52e-59 195
MsG0580026147.01.T01 AT3G15510 52.695 167 66 2 24 182 21 182 1.18e-58 195
MsG0580026147.01.T01 AT1G61110 53.179 173 73 3 22 187 18 189 4.96e-57 190
MsG0580026147.01.T01 AT3G04070 49.451 182 68 3 22 182 12 190 2.48e-56 189
MsG0580026147.01.T01 AT1G01720 51.497 167 74 2 20 186 7 166 7.89e-56 186
MsG0580026147.01.T01 AT1G69490 44.076 211 108 5 22 228 11 215 1.65e-55 184
MsG0580026147.01.T01 AT4G27410 49.724 181 79 4 22 202 16 184 8.77e-55 183
MsG0580026147.01.T01 AT1G77450 51.829 164 71 2 22 185 12 167 1.42e-54 181
MsG0580026147.01.T01 AT1G76420 39.922 258 134 4 5 255 12 255 1.49e-54 184
MsG0580026147.01.T01 AT3G15500 53.939 165 66 4 22 186 16 170 2.85e-54 182
MsG0580026147.01.T01 AT1G52890 51.705 176 74 5 22 197 16 180 4.59e-54 182
MsG0580026147.01.T01 AT5G63790 45.545 202 93 5 18 218 47 232 7.75e-54 181
MsG0580026147.01.T01 AT4G36160 48.876 178 76 4 20 194 14 179 7.87e-54 183
MsG0580026147.01.T01 AT4G36160 48.876 178 76 4 20 194 10 175 8.01e-54 183
MsG0580026147.01.T01 AT4G36160 48.876 178 76 4 20 194 10 175 8.01e-54 183
MsG0580026147.01.T01 AT5G63790 45.545 202 93 5 18 218 57 242 8.65e-54 181
MsG0580026147.01.T01 AT5G08790 52.727 165 71 3 18 181 4 162 1.07e-53 180
MsG0580026147.01.T01 AT1G52880 55.952 168 64 3 24 185 21 184 1.16e-53 181
MsG0580026147.01.T01 AT5G07680 44.934 227 105 6 10 226 9 225 2.43e-53 181
MsG0580026147.01.T01 AT5G61430 35.849 318 150 10 4 299 6 291 6.61e-53 179
MsG0580026147.01.T01 AT5G07680 46.047 215 98 5 22 226 5 211 2.37e-52 177
MsG0580026147.01.T01 AT5G39610 49.457 184 79 4 7 188 9 180 2.42e-52 176
MsG0580026147.01.T01 AT2G18060 47.191 178 78 5 20 194 9 173 3.77e-52 178
MsG0580026147.01.T01 AT2G18060 47.191 178 78 5 20 194 9 173 3.77e-52 178
MsG0580026147.01.T01 AT5G62380 34.884 301 165 9 20 303 7 293 1.91e-51 176
MsG0580026147.01.T01 AT5G62380 34.884 301 165 9 20 303 7 293 1.91e-51 176
MsG0580026147.01.T01 AT1G12260 47.929 169 73 3 20 185 7 163 2.25e-51 176
MsG0580026147.01.T01 AT1G12260 47.929 169 73 3 20 185 7 163 2.44e-51 177
MsG0580026147.01.T01 AT2G17040 49.711 173 70 4 18 186 4 163 2.82e-51 173
MsG0580026147.01.T01 AT3G18400 49.708 171 74 4 16 186 1 159 7.70e-51 174
MsG0580026147.01.T01 AT2G24430 43.889 180 92 1 5 184 1 171 9.72e-51 173
MsG0580026147.01.T01 AT2G24430 43.889 180 92 1 5 184 1 171 9.72e-51 173
MsG0580026147.01.T01 AT4G10350 50.000 164 69 3 20 180 9 162 1.32e-50 174
MsG0580026147.01.T01 AT4G27410 45.455 198 79 5 22 202 16 201 1.55e-50 173
MsG0580026147.01.T01 AT3G04060 48.588 177 78 4 4 178 6 171 2.21e-50 173
MsG0580026147.01.T01 AT5G18270 48.837 172 76 4 11 180 13 174 5.19e-50 172
MsG0580026147.01.T01 AT3G17730 50.311 161 64 4 22 178 8 156 7.40e-50 169
MsG0580026147.01.T01 AT1G62700 40.625 224 111 5 20 240 7 211 7.45e-50 173
MsG0580026147.01.T01 AT1G62700 40.625 224 111 5 20 240 7 211 7.45e-50 173
MsG0580026147.01.T01 AT3G29035 51.111 180 73 6 9 185 15 182 3.38e-49 169
MsG0580026147.01.T01 AT5G18270 48.256 172 77 4 11 180 13 174 3.50e-49 170
MsG0580026147.01.T01 AT3G03200 46.067 178 84 5 22 196 8 176 1.22e-48 172
MsG0580026147.01.T01 AT1G33280 49.390 164 67 3 20 180 8 158 1.65e-48 167
MsG0580026147.01.T01 AT4G17980 47.170 159 76 2 22 178 8 160 2.48e-48 165
MsG0580026147.01.T01 AT4G17980 46.296 162 79 2 19 178 5 160 2.66e-48 166
MsG0580026147.01.T01 AT5G53950 47.953 171 83 1 18 188 15 179 4.23e-48 168
MsG0580026147.01.T01 AT5G66300 47.977 173 74 5 20 187 12 173 4.56e-48 166
MsG0580026147.01.T01 AT1G65910 48.125 160 71 3 22 179 8 157 7.34e-48 172
MsG0580026147.01.T01 AT1G71930 39.908 218 112 7 22 235 11 213 1.53e-47 165
MsG0580026147.01.T01 AT1G71930 39.908 218 112 7 22 235 11 213 1.53e-47 165
MsG0580026147.01.T01 AT2G46770 45.614 171 79 4 20 180 16 182 3.97e-47 165
MsG0580026147.01.T01 AT5G17260 47.500 160 71 4 22 178 8 157 4.87e-47 167
MsG0580026147.01.T01 AT3G15170 47.929 169 81 3 17 184 16 178 6.22e-47 163
MsG0580026147.01.T01 AT5G13180 48.750 160 70 2 22 181 16 163 8.04e-47 161
MsG0580026147.01.T01 AT3G12977 43.646 181 91 4 5 183 1 172 1.60e-45 159
MsG0580026147.01.T01 AT1G54330 47.590 166 72 4 22 185 8 160 1.73e-45 159
MsG0580026147.01.T01 AT3G61910 44.022 184 92 6 20 195 11 191 2.04e-45 160
MsG0580026147.01.T01 AT3G10500 46.951 164 75 4 20 181 9 162 2.07e-45 165
MsG0580026147.01.T01 AT3G10490 45.833 168 70 4 20 180 27 180 4.70e-45 156
MsG0580026147.01.T01 AT4G35580 48.734 158 69 4 23 178 12 159 7.01e-45 163
MsG0580026147.01.T01 AT1G79580 45.732 164 74 3 20 180 17 168 7.18e-45 159
MsG0580026147.01.T01 AT1G79580 45.732 164 74 3 20 180 17 168 7.18e-45 159
MsG0580026147.01.T01 AT1G79580 45.732 164 74 3 20 180 17 168 7.18e-45 159
MsG0580026147.01.T01 AT1G79580 45.732 164 74 3 20 180 17 168 7.18e-45 159
MsG0580026147.01.T01 AT1G79580 45.732 164 74 3 20 180 17 168 7.18e-45 159
MsG0580026147.01.T01 AT4G35580 48.734 158 69 4 23 178 12 159 7.96e-45 163
MsG0580026147.01.T01 AT5G46590 55.469 128 54 2 22 147 8 134 8.27e-45 157
MsG0580026147.01.T01 AT4G35580 48.125 160 71 4 23 180 12 161 8.28e-45 162
MsG0580026147.01.T01 AT3G10480 46.061 165 74 4 20 180 27 180 1.07e-44 160
MsG0580026147.01.T01 AT1G33060 43.860 171 84 3 18 186 22 182 1.14e-44 164
MsG0580026147.01.T01 AT1G33060 43.860 171 84 3 18 186 22 182 1.20e-44 164
MsG0580026147.01.T01 AT3G10480 45.509 167 71 4 20 180 27 179 1.22e-44 160
MsG0580026147.01.T01 AT5G46590 55.469 128 54 2 22 147 8 134 1.24e-44 157
MsG0580026147.01.T01 AT1G56010 48.750 160 70 5 22 178 21 171 1.92e-44 157
MsG0580026147.01.T01 AT1G32770 44.828 174 73 5 20 180 16 179 2.99e-44 157
MsG0580026147.01.T01 AT1G34180 42.328 189 90 4 22 201 18 196 8.62e-44 158
MsG0580026147.01.T01 AT3G10490 45.833 168 70 4 20 180 27 180 1.03e-43 158
MsG0580026147.01.T01 AT5G24590 45.402 174 83 4 10 180 2 166 1.13e-43 158
MsG0580026147.01.T01 AT5G04410 45.732 164 77 3 20 181 9 162 1.70e-43 160
MsG0580026147.01.T01 AT1G34180 42.703 185 87 4 22 197 18 192 7.89e-43 158
MsG0580026147.01.T01 AT1G32510 42.442 172 85 3 22 186 8 172 2.88e-42 150
MsG0580026147.01.T01 AT1G34190 45.679 162 76 3 22 181 18 169 5.58e-42 155
MsG0580026147.01.T01 AT3G49530 43.671 158 78 3 23 178 16 164 5.84e-42 152
MsG0580026147.01.T01 AT1G34180 39.801 201 90 4 22 201 18 208 1.17e-41 153
MsG0580026147.01.T01 AT3G49530 44.099 161 78 4 21 178 13 164 1.57e-41 152
MsG0580026147.01.T01 AT2G33480 46.914 162 73 4 22 183 17 165 6.21e-41 146
MsG0580026147.01.T01 AT2G33480 46.914 162 71 4 22 183 17 163 8.42e-41 145
MsG0580026147.01.T01 AT1G34180 40.102 197 87 4 22 197 18 204 9.18e-41 152
MsG0580026147.01.T01 AT5G09330 41.615 161 82 3 20 178 6 156 1.80e-40 150
MsG0580026147.01.T01 AT5G09330 41.615 161 82 3 20 178 6 156 1.80e-40 150
MsG0580026147.01.T01 AT5G09330 41.615 161 82 3 20 178 6 156 1.80e-40 150
MsG0580026147.01.T01 AT5G09330 41.615 161 82 3 20 178 6 156 1.80e-40 150
MsG0580026147.01.T01 AT5G09330 41.615 161 82 3 20 178 6 156 1.80e-40 150
MsG0580026147.01.T01 AT4G28530 39.888 178 79 3 22 183 12 177 7.33e-40 145
MsG0580026147.01.T01 AT5G22290 41.520 171 80 5 20 186 21 175 1.23e-38 142
MsG0580026147.01.T01 AT3G10480 38.889 198 73 5 20 180 27 213 1.33e-38 145
MsG0580026147.01.T01 AT5G64060 34.221 263 142 12 20 269 6 250 2.94e-38 141
MsG0580026147.01.T01 AT3G44290 46.825 126 64 2 21 145 15 138 1.26e-36 134
MsG0580026147.01.T01 AT2G27300 43.750 128 69 2 19 145 13 138 2.25e-36 136
MsG0580026147.01.T01 AT3G44290 46.825 126 64 2 21 145 15 138 3.80e-36 135
MsG0580026147.01.T01 AT2G43000 61.538 104 29 3 82 185 2 94 6.78e-35 128
MsG0580026147.01.T01 AT5G61430 33.465 254 121 8 68 299 1 228 1.01e-33 127
MsG0580026147.01.T01 AT5G04395 42.857 140 66 2 22 147 30 169 1.34e-33 124
MsG0580026147.01.T01 AT1G32870 40.331 181 86 6 5 181 1 163 1.09e-31 126
MsG0580026147.01.T01 AT1G32870 40.331 181 86 6 5 181 1 163 1.15e-31 126
MsG0580026147.01.T01 AT5G22380 34.199 231 130 11 17 240 3 218 1.52e-31 120
MsG0580026147.01.T01 AT1G32870 40.541 185 87 7 1 181 34 199 1.72e-31 126
MsG0580026147.01.T01 AT5G64530 37.870 169 87 3 22 184 5 161 3.20e-31 118
MsG0580026147.01.T01 AT4G10350 50.877 114 46 2 67 180 12 115 8.07e-31 120
MsG0580026147.01.T01 AT3G12977 48.696 115 50 3 69 183 14 119 3.43e-30 116
MsG0580026147.01.T01 AT5G64530 44.882 127 58 2 22 148 5 119 5.29e-30 114
MsG0580026147.01.T01 AT3G44350 31.858 226 127 7 16 225 1 215 1.05e-29 115
MsG0580026147.01.T01 AT1G56010 48.649 111 50 3 68 178 1 104 1.75e-28 112
MsG0580026147.01.T01 AT3G44350 39.130 138 74 4 16 146 1 135 5.83e-28 108
MsG0580026147.01.T01 AT4G01550 41.045 134 75 3 21 150 5 138 3.29e-27 113
MsG0580026147.01.T01 AT4G01520 38.462 143 81 5 23 160 7 147 6.44e-25 103
MsG0580026147.01.T01 AT4G01540 39.310 145 81 5 21 160 5 147 1.01e-24 105
MsG0580026147.01.T01 AT4G01540 39.310 145 81 5 21 160 5 147 1.47e-24 104
MsG0580026147.01.T01 AT4G01540 39.310 145 81 5 21 160 5 147 1.77e-24 105
MsG0580026147.01.T01 AT4G01540 39.310 145 81 5 21 160 5 147 1.93e-24 104
MsG0580026147.01.T01 AT2G18060 49.485 97 36 4 98 194 2 85 1.11e-21 94.4
MsG0580026147.01.T01 AT2G33480 42.342 111 54 3 73 183 8 108 1.21e-21 92.8
MsG0580026147.01.T01 AT4G28530 38.889 126 61 2 22 131 12 137 3.38e-21 94.0
MsG0580026147.01.T01 AT1G02230 39.098 133 73 4 23 150 6 135 6.84e-21 93.6
MsG0580026147.01.T01 AT1G02250 41.406 128 67 4 23 145 6 130 1.51e-20 92.8
MsG0580026147.01.T01 AT3G04420 39.370 127 71 3 23 145 6 130 1.86e-20 91.3
MsG0580026147.01.T01 AT3G04420 39.370 127 71 3 23 145 6 130 7.13e-20 90.5
MsG0580026147.01.T01 AT1G01010 30.800 250 141 12 23 259 6 236 1.03e-17 85.1
MsG0580026147.01.T01 AT1G02220 39.370 127 68 4 23 145 6 127 9.56e-17 81.6
MsG0580026147.01.T01 AT5G14000 32.432 148 87 5 5 147 1 140 4.73e-16 75.5
MsG0580026147.01.T01 AT5G14000 27.419 186 111 6 5 185 1 167 1.25e-15 75.5
MsG0580026147.01.T01 AT5G50820 36.842 133 68 6 22 149 19 140 2.23e-15 74.7
MsG0580026147.01.T01 AT3G56530 32.090 134 86 3 22 152 54 185 4.86e-14 73.2
MsG0580026147.01.T01 AT3G10490 37.634 93 39 3 93 180 2 80 6.46e-13 70.1
MsG0580026147.01.T01 AT3G10490 37.634 93 39 3 93 180 2 80 6.46e-13 70.1
MsG0580026147.01.T01 AT3G04430 33.835 133 74 5 26 146 6 136 7.52e-13 67.4
MsG0580026147.01.T01 AT5G22290 39.560 91 36 4 99 186 2 76 1.34e-11 64.7

Find 83 sgRNAs with CRISPR-Local

Find 120 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACATGTTGTTTGAACAAAAT+TGG 0.184460 5:-31392999 None:intergenic
AAGTTATCTTACCAGGATTT+AGG 0.220891 5:+31391470 MsG0580026147.01.T01:CDS
GAAACAGTGCAAGGCCTAAT+AGG 0.247551 5:+31392076 MsG0580026147.01.T01:CDS
TGAAACATCCATTGTAGATT+TGG 0.251668 5:-31393241 None:intergenic
TTTGTTGAACCTTTCTCTTT+AGG 0.261897 5:-31391528 None:intergenic
GGACTAATAATGGATTTATA+AGG 0.264927 5:-31393102 None:intergenic
GTTTATTTGTAGAAGAAAAT+AGG 0.266112 5:+31391406 None:intergenic
GGGTAACTGGAGCTGGATTC+TGG 0.266844 5:+31392097 MsG0580026147.01.T01:CDS
CCAATGCATTATTATCATAT+TGG 0.276292 5:-31393398 None:intergenic
GTGTAGTAATGGACTAATAA+TGG 0.280115 5:-31393112 None:intergenic
ACATTCACATTAACATTATA+AGG 0.303980 5:-31393429 None:intergenic
ATTTAGATCTTCATTTGAAA+TGG 0.310841 5:-31393154 None:intergenic
CATGGAAGTCAAATTTGCTT+TGG 0.326417 5:+31393499 MsG0580026147.01.T01:CDS
GAATTGATGAATTTCAATAT+TGG 0.333275 5:+31393471 MsG0580026147.01.T01:CDS
TAACATCTACATCAAAGTTT+TGG 0.333896 5:-31393077 None:intergenic
GACTAATAATGGATTTATAA+GGG 0.345533 5:-31393101 None:intergenic
GCAAGGCCTAATAGGGTAAC+TGG 0.368447 5:+31392084 MsG0580026147.01.T01:CDS
AAGAGCTTTGTCACACTCTT+GGG 0.374809 5:+31392918 MsG0580026147.01.T01:CDS
GAACCTTCTGAGGAGTAGAT+AGG 0.383654 5:-31392141 None:intergenic
CAACTGATGAAGAGCTTGTT+GGG 0.384547 5:+31391500 MsG0580026147.01.T01:CDS
TAACTAGAGGGAACATCAAT+AGG 0.388427 5:-31393537 None:intergenic
AAAAGACTAAGGATTTCTTT+AGG 0.389485 5:-31392176 None:intergenic
ATGGAAGTCAAATTTGCTTT+GGG 0.392121 5:+31393500 MsG0580026147.01.T01:CDS
CATGTTGTTTGAACAAAATT+GGG 0.393384 5:-31392998 None:intergenic
CCAGCTCCAGTTACCCTATT+AGG 0.395888 5:-31392090 None:intergenic
AAAGAGCTTTGTCACACTCT+TGG 0.396032 5:+31392917 MsG0580026147.01.T01:CDS
GAAGAAAATAGGTTTAGATA+TGG 0.396823 5:+31391417 None:intergenic
TCTTCCTTTGTAAAAGACTA+AGG 0.405196 5:-31392187 None:intergenic
TGATAATAATGCATTGGTTA+AGG 0.409165 5:+31393404 MsG0580026147.01.T01:CDS
TAGAGGTTCTTGTTTCAGAT+AGG 0.410820 5:-31392948 None:intergenic
CCAACTGATGAAGAGCTTGT+TGG 0.424666 5:+31391499 MsG0580026147.01.T01:CDS
TTTAGATCTTCATTTGAAAT+GGG 0.432991 5:-31393153 None:intergenic
ACAACTACAAATTTCATGAA+TGG 0.443610 5:+31393330 MsG0580026147.01.T01:CDS
AGTGACTACTCATTACCATT+TGG 0.444946 5:+31393372 MsG0580026147.01.T01:CDS
AAGTACTTCTTTGGTGAAAG+TGG 0.447802 5:-31392273 None:intergenic
CTTGATGAAGTTATCTTACC+AGG 0.449714 5:+31391463 MsG0580026147.01.T01:CDS
AAACAGTGCAAGGCCTAATA+GGG 0.452535 5:+31392077 MsG0580026147.01.T01:CDS
GCTGGATTCTGGAAAGCTAC+AGG 0.462218 5:+31392108 MsG0580026147.01.T01:CDS
TTTCTTTAGGCCAATGCACT+TGG 0.465693 5:-31392163 None:intergenic
CCTAATAGGGTAACTGGAGC+TGG 0.468839 5:+31392090 MsG0580026147.01.T01:CDS
ACTTTCACCAAAGAAGTACT+TGG 0.472752 5:+31392275 MsG0580026147.01.T01:CDS
ACTGGATGATGCATGAGTTC+AGG 0.474694 5:+31392232 MsG0580026147.01.T01:CDS
GTCTTACTTGGAAGATCCCA+TGG 0.475315 5:-31391601 None:intergenic
TTATCATATTGGTTACCAAA+TGG 0.477245 5:-31393387 None:intergenic
TAAAGTTTACTCACATTAGC+AGG 0.478939 5:-31392309 None:intergenic
AGAGGTTCTTGTTTCAGATA+GGG 0.482157 5:-31392947 None:intergenic
TACAAAGGAAGAGCTGCTAA+AGG 0.482478 5:+31392198 MsG0580026147.01.T01:CDS
TGTGTAGAGTTTGCAAGTAC+AGG 0.488055 5:+31392009 MsG0580026147.01.T01:intron
TTTACTCACATTAGCAGGAA+TGG 0.489171 5:-31392304 None:intergenic
ACTACAAATTTCATGAATGG+TGG 0.505591 5:+31393333 MsG0580026147.01.T01:CDS
ATATCTATAAATATGATCCA+TGG 0.506117 5:+31391584 MsG0580026147.01.T01:CDS
GTTAAAATCACCAAGCATTG+AGG 0.509367 5:-31393289 None:intergenic
GATATGGAAGAAAGAAATGA+TGG 0.515202 5:+31391433 MsG0580026147.01.T01:CDS
GTTGGGTGAAACCTAAATCC+TGG 0.518377 5:-31391481 None:intergenic
CTACAAATTTCATGAATGGT+GGG 0.522679 5:+31393334 MsG0580026147.01.T01:CDS
AATGCACTTGGAACCTTCTG+AGG 0.523326 5:-31392151 None:intergenic
CTAAAGGAATCAAAACTGAC+TGG 0.527746 5:+31392214 MsG0580026147.01.T01:CDS
CCAACAAGCTCTTCATCAGT+TGG 0.530111 5:-31391499 None:intergenic
CAACAAGCTCTTCATCAGTT+GGG 0.531684 5:-31391498 None:intergenic
GAAAGTGGATCTATGAGAGA+AGG 0.536482 5:-31392258 None:intergenic
TGAAATGGGCAAGTGATGAA+AGG 0.539070 5:-31393139 None:intergenic
ATTGACAAAGAATACATCCT+TGG 0.542699 5:+31393023 MsG0580026147.01.T01:CDS
CCAATATGATAATAATGCAT+TGG 0.542771 5:+31393398 MsG0580026147.01.T01:CDS
CATTGTTGTTAGTGTAGAAG+TGG 0.554564 5:-31393050 None:intergenic
TCAGAAGGTTCCAAGTGCAT+TGG 0.555187 5:+31392153 MsG0580026147.01.T01:CDS
TGTTATTTCCAAATCTACAA+TGG 0.557635 5:+31393233 MsG0580026147.01.T01:CDS
ATGTCATCATCCTCAATGCT+TGG 0.574915 5:+31393279 MsG0580026147.01.T01:CDS
CAAGTACAGGAGAGAAAGAG+TGG 0.578025 5:+31392022 MsG0580026147.01.T01:CDS
ATTTCAATATTGGTGATGCA+TGG 0.583124 5:+31393481 MsG0580026147.01.T01:CDS
TATCTATAAATATGATCCAT+GGG 0.583366 5:+31391585 MsG0580026147.01.T01:CDS
ACTAATAATGGATTTATAAG+GGG 0.586489 5:-31393100 None:intergenic
AAACCTATCTACTCCTCAGA+AGG 0.590506 5:+31392138 MsG0580026147.01.T01:CDS
TTAGTGTTAGATGATTCAAG+TGG 0.596611 5:-31393204 None:intergenic
CTGGATTCTGGAAAGCTACA+GGG 0.596618 5:+31392109 MsG0580026147.01.T01:CDS
GTTGTTAGTGTAGAAGTGGT+TGG 0.597687 5:-31393046 None:intergenic
CTTGGTTGTTGAATAACTAG+AGG 0.600536 5:-31393550 None:intergenic
TACAAATTAAGTGTAACACT+TGG 0.625059 5:-31393568 None:intergenic
TTGGTTGTTGAATAACTAGA+GGG 0.629756 5:-31393549 None:intergenic
AGTGTAGAAGTGGTTGGCCA+AGG 0.630212 5:-31393040 None:intergenic
GAAAATACAGAAACAGTGCA+AGG 0.653407 5:+31392067 MsG0580026147.01.T01:CDS
TAAAGAGAAAGGTTCAACAA+AGG 0.656075 5:+31391530 MsG0580026147.01.T01:CDS
AATTCTTGTTCATCAATACG+AGG 0.699073 5:-31393453 None:intergenic
TTGATGAGCTCAATAGACAG+AGG 0.712731 5:-31391553 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! CTTATATATAAGTATTTATA+TGG - Chr5:31391700-31391719 None:intergenic 10.0%
!!! ATTACTAATATAGATATTTT+AGG - Chr5:31392524-31392543 None:intergenic 10.0%
!! AAATATCATTTATGGAATTA+TGG + Chr5:31392816-31392835 MsG0580026147.01.T01:intron 15.0%
!!! GACAAATATTTTAAATGAAA+TGG + Chr5:31392583-31392602 MsG0580026147.01.T01:intron 15.0%
!! ACATTCACATTAACATTATA+AGG - Chr5:31393432-31393451 None:intergenic 20.0%
!! ATATCTATAAATATGATCCA+TGG + Chr5:31391584-31391603 MsG0580026147.01.T01:CDS 20.0%
!! ATTTAGATCTTCATTTGAAA+TGG - Chr5:31393157-31393176 None:intergenic 20.0%
!! GAATTGATGAATTTCAATAT+TGG + Chr5:31393471-31393490 MsG0580026147.01.T01:CDS 20.0%
!! GTGTTTGTAAATATCATTTA+TGG + Chr5:31392808-31392827 MsG0580026147.01.T01:intron 20.0%
!! TATCTATAAATATGATCCAT+GGG + Chr5:31391585-31391604 MsG0580026147.01.T01:CDS 20.0%
!!! AAGAAGATTGATAATAGTTA+AGG + Chr5:31391769-31391788 MsG0580026147.01.T01:intron 20.0%
!!! ACTAATAATGGATTTATAAG+GGG - Chr5:31393103-31393122 None:intergenic 20.0%
!!! AGCATTTTTAATGATTTTAG+CGG + Chr5:31392705-31392724 MsG0580026147.01.T01:intron 20.0%
!!! GACTAATAATGGATTTATAA+GGG - Chr5:31393104-31393123 None:intergenic 20.0%
!!! TTTAGATCTTCATTTGAAAT+GGG - Chr5:31393156-31393175 None:intergenic 20.0%
! AAAAGACTAAGGATTTCTTT+AGG - Chr5:31392179-31392198 None:intergenic 25.0%
! ACAACTACAAATTTCATGAA+TGG + Chr5:31393330-31393349 MsG0580026147.01.T01:CDS 25.0%
! AGACACTTAAATATCTTTGT+TGG + Chr5:31391625-31391644 MsG0580026147.01.T01:intron 25.0%
! ATGCTATAAGCACTTAATTA+AGG - Chr5:31391668-31391687 None:intergenic 25.0%
! ATTTGATACAACATTCTGTA+CGG + Chr5:31392733-31392752 MsG0580026147.01.T01:intron 25.0%
! CCAATATGATAATAATGCAT+TGG + Chr5:31393398-31393417 MsG0580026147.01.T01:CDS 25.0%
! CCAATGCATTATTATCATAT+TGG - Chr5:31393401-31393420 None:intergenic 25.0%
! TGCTATAAGCACTTAATTAA+GGG - Chr5:31391667-31391686 None:intergenic 25.0%
! TTCTATTACAAAAGTCAAAC+TGG + Chr5:31391724-31391743 MsG0580026147.01.T01:intron 25.0%
!! ACATGTTGTTTGAACAAAAT+TGG - Chr5:31393002-31393021 None:intergenic 25.0%
!! CATGTTGTTTGAACAAAATT+GGG - Chr5:31393001-31393020 None:intergenic 25.0%
!! TAACATCTACATCAAAGTTT+TGG - Chr5:31393080-31393099 None:intergenic 25.0%
!! TTATCATATTGGTTACCAAA+TGG - Chr5:31393390-31393409 None:intergenic 25.0%
!!! AAATCCTTAGTCTTTTACAA+AGG + Chr5:31392183-31392202 MsG0580026147.01.T01:CDS 25.0%
!!! ATTTTTGGTTAGCATATTAG+AGG - Chr5:31392968-31392987 None:intergenic 25.0%
!!! GGACTAATAATGGATTTATA+AGG - Chr5:31393105-31393124 None:intergenic 25.0%
!!! TGATAATAATGCATTGGTTA+AGG + Chr5:31393404-31393423 MsG0580026147.01.T01:CDS 25.0%
!!! TGTTATTTCCAAATCTACAA+TGG + Chr5:31393233-31393252 MsG0580026147.01.T01:CDS 25.0%
!!! TTTATTTCTATAAGTTCTCC+AGG - Chr5:31391890-31391909 None:intergenic 25.0%
AAGTTATCTTACCAGGATTT+AGG + Chr5:31391470-31391489 MsG0580026147.01.T01:CDS 30.0%
AATTCTTGTTCATCAATACG+AGG - Chr5:31393456-31393475 None:intergenic 30.0%
ACACTGTTTAGCATAGTTTA+TGG - Chr5:31391954-31391973 None:intergenic 30.0%
ACTACAAATTTCATGAATGG+TGG + Chr5:31393333-31393352 MsG0580026147.01.T01:CDS 30.0%
ATTGACAAAGAATACATCCT+TGG + Chr5:31393023-31393042 MsG0580026147.01.T01:CDS 30.0%
CATTACGATCCTTGATATTA+TGG + Chr5:31392375-31392394 MsG0580026147.01.T01:intron 30.0%
CATTGTCAACATATCATAGT+TGG + Chr5:31392643-31392662 MsG0580026147.01.T01:intron 30.0%
CTACAAATTTCATGAATGGT+GGG + Chr5:31393334-31393353 MsG0580026147.01.T01:CDS 30.0%
GATATGGAAGAAAGAAATGA+TGG + Chr5:31391433-31391452 MsG0580026147.01.T01:CDS 30.0%
TAAAGAGAAAGGTTCAACAA+AGG + Chr5:31391530-31391549 MsG0580026147.01.T01:CDS 30.0%
TAAAGTTTACTCACATTAGC+AGG - Chr5:31392312-31392331 None:intergenic 30.0%
TCTTCCTTTGTAAAAGACTA+AGG - Chr5:31392190-31392209 None:intergenic 30.0%
TGAAACATCCATTGTAGATT+TGG - Chr5:31393244-31393263 None:intergenic 30.0%
TTAGCATAGTTTATGGAAAG+TGG - Chr5:31391947-31391966 None:intergenic 30.0%
TTAGTGTTAGATGATTCAAG+TGG - Chr5:31393207-31393226 None:intergenic 30.0%
TTGGTTGTTGAATAACTAGA+GGG - Chr5:31393552-31393571 None:intergenic 30.0%
TTTAAGTGTCTTGTCTTACT+TGG - Chr5:31391616-31391635 None:intergenic 30.0%
TTTGTTGAACCTTTCTCTTT+AGG - Chr5:31391531-31391550 None:intergenic 30.0%
! ATGGAAGTCAAATTTGCTTT+GGG + Chr5:31393500-31393519 MsG0580026147.01.T01:CDS 30.0%
! TTGGGTGATTTCTTGATTTT+TGG - Chr5:31392983-31393002 None:intergenic 30.0%
! TTTCTGTATTTTCTGTCTCT+TGG - Chr5:31392060-31392079 None:intergenic 30.0%
! TTTTAACAAGACATGTGATG+AGG + Chr5:31393305-31393324 MsG0580026147.01.T01:CDS 30.0%
! TTTTAACATGCAGGAATCAT+GGG + Chr5:31392855-31392874 MsG0580026147.01.T01:intron 30.0%
!! ATTTCAATATTGGTGATGCA+TGG + Chr5:31393481-31393500 MsG0580026147.01.T01:CDS 30.0%
!! GTGTAGTAATGGACTAATAA+TGG - Chr5:31393115-31393134 None:intergenic 30.0%
!! GTTGTTTTCATAAGTTATCC+TGG + Chr5:31391869-31391888 MsG0580026147.01.T01:intron 30.0%
!! TAACTTGTCTTTTAACATGC+AGG + Chr5:31392846-31392865 MsG0580026147.01.T01:intron 30.0%
!! TGAAAGGTTTTGTGTAGTAA+TGG - Chr5:31393126-31393145 None:intergenic 30.0%
AAGTACTTCTTTGGTGAAAG+TGG - Chr5:31392276-31392295 None:intergenic 35.0%
AGTGACTACTCATTACCATT+TGG + Chr5:31393372-31393391 MsG0580026147.01.T01:CDS 35.0%
CTAAAGGAATCAAAACTGAC+TGG + Chr5:31392214-31392233 MsG0580026147.01.T01:CDS 35.0%
CTTGATGAAGTTATCTTACC+AGG + Chr5:31391463-31391482 MsG0580026147.01.T01:CDS 35.0%
CTTGGTTGTTGAATAACTAG+AGG - Chr5:31393553-31393572 None:intergenic 35.0%
GAAAATACAGAAACAGTGCA+AGG + Chr5:31392067-31392086 MsG0580026147.01.T01:CDS 35.0%
TAACTAGAGGGAACATCAAT+AGG - Chr5:31393540-31393559 None:intergenic 35.0%
TGCGATTCTCCATAATATCA+AGG - Chr5:31392387-31392406 None:intergenic 35.0%
TTTACTCACATTAGCAGGAA+TGG - Chr5:31392307-31392326 None:intergenic 35.0%
! AGAGGTTCTTGTTTCAGATA+GGG - Chr5:31392950-31392969 None:intergenic 35.0%
! CATGGAAGTCAAATTTGCTT+TGG + Chr5:31393499-31393518 MsG0580026147.01.T01:CDS 35.0%
! CATTGTTGTTAGTGTAGAAG+TGG - Chr5:31393053-31393072 None:intergenic 35.0%
! CTTTTAACATGCAGGAATCA+TGG + Chr5:31392854-31392873 MsG0580026147.01.T01:intron 35.0%
! GTTAAAATCACCAAGCATTG+AGG - Chr5:31393292-31393311 None:intergenic 35.0%
! GTTTTCTCCAAGTACTTCTT+TGG - Chr5:31392285-31392304 None:intergenic 35.0%
! TAGAGGTTCTTGTTTCAGAT+AGG - Chr5:31392951-31392970 None:intergenic 35.0%
! TGGGTTTTACCTAAAGAGAA+AGG + Chr5:31391519-31391538 MsG0580026147.01.T01:CDS 35.0%
!! AAGTCAAACTGGTTCGATAT+AGG + Chr5:31391735-31391754 MsG0580026147.01.T01:intron 35.0%
!! ACTTTCACCAAAGAAGTACT+TGG + Chr5:31392275-31392294 MsG0580026147.01.T01:CDS 35.0%
AAACAGTGCAAGGCCTAATA+GGG + Chr5:31392077-31392096 MsG0580026147.01.T01:CDS 40.0%
AAACCTATCTACTCCTCAGA+AGG + Chr5:31392138-31392157 MsG0580026147.01.T01:CDS 40.0%
ATGAAATGGTTGCAGTGAGA+TGG + Chr5:31392597-31392616 MsG0580026147.01.T01:intron 40.0%
ATGTCATCATCCTCAATGCT+TGG + Chr5:31393279-31393298 MsG0580026147.01.T01:CDS 40.0%
CAACAAGCTCTTCATCAGTT+GGG - Chr5:31391501-31391520 None:intergenic 40.0%
GAAAGTGGATCTATGAGAGA+AGG - Chr5:31392261-31392280 None:intergenic 40.0%
GTTGTTAGTGTAGAAGTGGT+TGG - Chr5:31393049-31393068 None:intergenic 40.0%
TACAAAGGAAGAGCTGCTAA+AGG + Chr5:31392198-31392217 MsG0580026147.01.T01:CDS 40.0%
TGAAATGGGCAAGTGATGAA+AGG - Chr5:31393142-31393161 None:intergenic 40.0%
TGTGTAGAGTTTGCAAGTAC+AGG + Chr5:31392009-31392028 MsG0580026147.01.T01:intron 40.0%
TTGATGAGCTCAATAGACAG+AGG - Chr5:31391556-31391575 None:intergenic 40.0%
TTTCTTTAGGCCAATGCACT+TGG - Chr5:31392166-31392185 None:intergenic 40.0%
! AAAGAGCTTTGTCACACTCT+TGG + Chr5:31392917-31392936 MsG0580026147.01.T01:CDS 40.0%
! AAGAGCTTTGTCACACTCTT+GGG + Chr5:31392918-31392937 MsG0580026147.01.T01:CDS 40.0%
! AGTTAAGGTGCTAACCTAGT+TGG + Chr5:31391784-31391803 MsG0580026147.01.T01:intron 40.0%
! CAACTGATGAAGAGCTTGTT+GGG + Chr5:31391500-31391519 MsG0580026147.01.T01:CDS 40.0%
! GTTAAGGTGCTAACCTAGTT+GGG + Chr5:31391785-31391804 MsG0580026147.01.T01:intron 40.0%
AAATGGTTGCAGTGAGATGG+AGG + Chr5:31392600-31392619 MsG0580026147.01.T01:intron 45.0%
AACTCGTGCGATGTCAACAT+AGG + Chr5:31392416-31392435 MsG0580026147.01.T01:intron 45.0%
AATGCACTTGGAACCTTCTG+AGG - Chr5:31392154-31392173 None:intergenic 45.0%
AATGGTTGCAGTGAGATGGA+GGG + Chr5:31392601-31392620 MsG0580026147.01.T01:intron 45.0%
ACTGGATGATGCATGAGTTC+AGG + Chr5:31392232-31392251 MsG0580026147.01.T01:CDS 45.0%
CAAGTACAGGAGAGAAAGAG+TGG + Chr5:31392022-31392041 MsG0580026147.01.T01:CDS 45.0%
CCAACAAGCTCTTCATCAGT+TGG - Chr5:31391502-31391521 None:intergenic 45.0%
CCAACTGATGAAGAGCTTGT+TGG + Chr5:31391499-31391518 MsG0580026147.01.T01:CDS 45.0%
GAAACAGTGCAAGGCCTAAT+AGG + Chr5:31392076-31392095 MsG0580026147.01.T01:CDS 45.0%
GTCTTACTTGGAAGATCCCA+TGG - Chr5:31391604-31391623 None:intergenic 45.0%
GTTGGGTGAAACCTAAATCC+TGG - Chr5:31391484-31391503 None:intergenic 45.0%
TCAGAAGGTTCCAAGTGCAT+TGG + Chr5:31392153-31392172 MsG0580026147.01.T01:CDS 45.0%
! CTGGATTCTGGAAAGCTACA+GGG + Chr5:31392109-31392128 MsG0580026147.01.T01:CDS 45.0%
! GAACCTTCTGAGGAGTAGAT+AGG - Chr5:31392144-31392163 None:intergenic 45.0%
!!! TTTTTTTTTTAAAAAAACTT+AGG + Chr5:31392773-31392792 MsG0580026147.01.T01:intron 5.0%
AACGTGCGAACATCCCAACT+AGG - Chr5:31391801-31391820 None:intergenic 50.0%
CCAGCTCCAGTTACCCTATT+AGG - Chr5:31392093-31392112 None:intergenic 50.0%
CCTAATAGGGTAACTGGAGC+TGG + Chr5:31392090-31392109 MsG0580026147.01.T01:CDS 50.0%
GCAAGGCCTAATAGGGTAAC+TGG + Chr5:31392084-31392103 MsG0580026147.01.T01:CDS 50.0%
! AGTGTAGAAGTGGTTGGCCA+AGG - Chr5:31393043-31393062 None:intergenic 50.0%
! GCTGGATTCTGGAAAGCTAC+AGG + Chr5:31392108-31392127 MsG0580026147.01.T01:CDS 50.0%
GGGTAACTGGAGCTGGATTC+TGG + Chr5:31392097-31392116 MsG0580026147.01.T01:CDS 55.0%
Chromosome Type Strat End Strand Name
Chr5 gene 31391418 31393584 31391418 ID=MsG0580026147.01;Name=MsG0580026147.01
Chr5 mRNA 31391418 31393584 31391418 ID=MsG0580026147.01.T01;Parent=MsG0580026147.01;Name=MsG0580026147.01.T01;_AED=0.47;_eAED=0.47;_QI=0|0|0|1|1|1|3|0|405
Chr5 exon 31391418 31391616 31391418 ID=MsG0580026147.01.T01:exon:24863;Parent=MsG0580026147.01.T01
Chr5 exon 31392016 31392317 31392016 ID=MsG0580026147.01.T01:exon:24864;Parent=MsG0580026147.01.T01
Chr5 exon 31392868 31393584 31392868 ID=MsG0580026147.01.T01:exon:24865;Parent=MsG0580026147.01.T01
Chr5 CDS 31391418 31391616 31391418 ID=MsG0580026147.01.T01:cds;Parent=MsG0580026147.01.T01
Chr5 CDS 31392016 31392317 31392016 ID=MsG0580026147.01.T01:cds;Parent=MsG0580026147.01.T01
Chr5 CDS 31392868 31393584 31392868 ID=MsG0580026147.01.T01:cds;Parent=MsG0580026147.01.T01
Gene Sequence

>MsG0580026147.01.T01

AAGAAAATAGGTTTAGATATGGAAGAAAGAAATGATGGTGAAAAACTTGATGAAGTTATCTTACCAGGATTTAGGTTTCACCCAACTGATGAAGAGCTTGTTGGGTTTTACCTAAAGAGAAAGGTTCAACAAAGGCCTCTGTCTATTGAGCTCATCAAGCAGCTTGATATCTATAAATATGATCCATGGGATCTTCCAAAGTTTGCAAGTACAGGAGAGAAAGAGTGGTATTTCTACTGTCCAAGAGACAGAAAATACAGAAACAGTGCAAGGCCTAATAGGGTAACTGGAGCTGGATTCTGGAAAGCTACAGGGACAGATAAACCTATCTACTCCTCAGAAGGTTCCAAGTGCATTGGCCTAAAGAAATCCTTAGTCTTTTACAAAGGAAGAGCTGCTAAAGGAATCAAAACTGACTGGATGATGCATGAGTTCAGGCTACCTTCTCTCATAGATCCACTTTCACCAAAGAAGTACTTGGAGAAAACCATTCCTGCTAATGAATCATGGGCTATCTGTAGAATATTCAAGAAAACAAATTCTACAGCTCAAAGAGCTTTGTCACACTCTTGGGTTTCTTCCCTATCTGAAACAAGAACCTCTAATATGCTAACCAAAAATCAAGAAATCACCCAATTTTGTTCAAACAACATGTCATTGACAAAGAATACATCCTTGGCCAACCACTTCTACACTAACAACAATGATAACCAAAACTTTGATGTAGATGTTACCCCTTATAAATCCATTATTAGTCCATTACTACACAAAACCTTTCATCACTTGCCCATTTCAAATGAAGATCTAAATATAAACTTGATATTCTCATCATCATCTCCACTTGAATCATCTAACACTAATAATAATGTTATTTCCAAATCTACAATGGATGTTTCATCAATGTTGTTGAATATGTCATCATCCTCAATGCTTGGTGATTTTAACAAGACATGTGATGAGGTTACAACTACAAATTTCATGAATGGTGGGTTGCAAGAGCAATTTAGTGACTACTCATTACCATTTGGTAACCAATATGATAATAATGCATTGGTTAAGGTACCTTATAATGTTAATGTGAATGTGCCTCGTATTGATGAACAAGAATTGATGAATTTCAATATTGGTGATGCATGGAAGTCAAATTTGCTTTGGGATACTTCATTTTGTCCTATTGATGTTCCCTCTAGTTATTCAACAACCAAGTGTTACACTTAA

Protein sequence

>MsG0580026147.01.T01

KKIGLDMEERNDGEKLDEVILPGFRFHPTDEELVGFYLKRKVQQRPLSIELIKQLDIYKYDPWDLPKFASTGEKEWYFYCPRDRKYRNSARPNRVTGAGFWKATGTDKPIYSSEGSKCIGLKKSLVFYKGRAAKGIKTDWMMHEFRLPSLIDPLSPKKYLEKTIPANESWAICRIFKKTNSTAQRALSHSWVSSLSETRTSNMLTKNQEITQFCSNNMSLTKNTSLANHFYTNNNDNQNFDVDVTPYKSIISPLLHKTFHHLPISNEDLNINLIFSSSSPLESSNTNNNVISKSTMDVSSMLLNMSSSSMLGDFNKTCDEVTTTNFMNGGLQEQFSDYSLPFGNQYDNNALVKVPYNVNVNVPRIDEQELMNFNIGDAWKSNLLWDTSFCPIDVPSSYSTTKCYT*