AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0580026703.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580026703.01.T01 MTR_4g119600 75.084 297 72 2 1 296 1 296 5.80e-158 449
MsG0580026703.01.T01 MTR_6g075990 81.579 228 41 1 1 227 19 246 6.00e-132 380
MsG0580026703.01.T01 MTR_8g103800 69.343 274 55 2 1 274 1 245 1.02e-126 368
MsG0580026703.01.T01 MTR_8g095070 67.188 256 53 4 1 256 1 225 4.45e-111 327
MsG0580026703.01.T01 MTR_5g031650 81.771 192 34 1 12 202 34 225 3.97e-110 323
MsG0580026703.01.T01 MTR_8g020437 80.100 201 32 2 233 425 49 249 5.01e-110 324
MsG0580026703.01.T01 MTR_4g057975 77.184 206 40 2 1 205 1 200 3.57e-109 320
MsG0580026703.01.T01 MTR_1g051465 78.713 202 33 2 233 425 155 355 2.35e-107 321
MsG0580026703.01.T01 MTR_5g062340 78.218 202 34 2 233 425 229 429 4.66e-107 323
MsG0580026703.01.T01 MTR_1g035110 78.713 202 33 2 233 425 204 404 1.78e-106 321
MsG0580026703.01.T01 MTR_8g107490 73.460 211 42 1 64 274 44 240 2.41e-106 317
MsG0580026703.01.T01 MTR_5g018790 93.252 163 11 0 263 425 552 714 1.87e-104 325
MsG0580026703.01.T01 MTR_5g018790 76.423 123 29 0 161 283 1 123 2.21e-53 189
MsG0580026703.01.T01 MTR_7g006230 78.713 202 33 2 233 425 296 496 2.09e-104 318
MsG0580026703.01.T01 MTR_1g016820 76.500 200 39 2 234 425 165 364 1.41e-102 309
MsG0580026703.01.T01 MTR_4g065057 79.679 187 32 2 239 425 132 312 2.28e-102 307
MsG0580026703.01.T01 MTR_7g029645 78.109 201 34 2 234 425 296 495 2.49e-102 313
MsG0580026703.01.T01 MTR_1g098990 68.584 226 39 2 1 225 1 195 6.65e-101 302
MsG0580026703.01.T01 MTR_3g067290 74.771 218 31 2 1 218 28 221 1.72e-100 299
MsG0580026703.01.T01 MTR_8g409330 72.947 207 33 4 229 425 31 224 4.52e-98 293
MsG0580026703.01.T01 MTR_8g009330 78.142 183 39 1 1 183 24 205 6.98e-98 292
MsG0580026703.01.T01 MTR_2g096070 75.622 201 41 2 233 425 616 816 3.48e-96 306
MsG0580026703.01.T01 MTR_2g096070 67.005 197 21 2 64 260 83 235 2.03e-75 251
MsG0580026703.01.T01 MTR_2g067680 91.971 137 11 0 289 425 148 284 2.52e-87 267
MsG0580026703.01.T01 MTR_0116s0050 66.667 204 32 2 20 223 4 171 5.37e-87 262
MsG0580026703.01.T01 MTR_8g463980 69.652 201 32 3 233 425 319 498 1.75e-85 270
MsG0580026703.01.T01 MTR_8g463980 90.196 102 10 0 319 420 1 102 4.39e-57 196
MsG0580026703.01.T01 MTR_8g020433 75.301 166 38 1 118 283 70 232 6.25e-80 254
MsG0580026703.01.T01 MTR_1g052890 86.400 125 17 0 136 260 1 125 1.98e-72 230
MsG0580026703.01.T01 MTR_7g060350 59.391 197 59 2 1 197 1 176 6.24e-68 214
MsG0580026703.01.T01 MTR_8g463940 74.820 139 34 1 1 138 31 169 1.96e-66 210
MsG0580026703.01.T01 MTR_6g089230 44.622 251 92 3 100 350 20 223 1.19e-64 207
MsG0580026703.01.T01 MTR_6g037570 77.622 143 31 1 1 142 16 158 3.03e-63 205
MsG0580026703.01.T01 MTR_6g018990 63.473 167 29 2 1 166 1 136 1.09e-62 199
MsG0580026703.01.T01 MTR_0341s0040 72.059 136 37 1 1 135 1 136 1.57e-62 198
MsG0580026703.01.T01 MTR_3g015530 51.528 229 89 4 16 237 1 214 9.69e-62 200
MsG0580026703.01.T01 MTR_5g046245 77.311 119 27 0 134 252 5 123 3.14e-60 196
MsG0580026703.01.T01 MTR_5g046245 76.923 65 15 0 131 195 146 210 1.81e-26 106
MsG0580026703.01.T01 MTR_6g019000 78.512 121 25 1 1 120 1 121 4.93e-60 191
MsG0580026703.01.T01 MTR_1g024975 85.047 107 16 0 319 425 1 107 6.68e-60 191
MsG0580026703.01.T01 MTR_4g057300 52.062 194 92 1 103 296 1 193 9.20e-59 196
MsG0580026703.01.T01 MTR_2g026605 77.500 120 26 1 1 119 1 120 9.34e-59 189
MsG0580026703.01.T01 MTR_0340s0010 71.111 135 38 1 1 134 43 177 1.28e-58 190
MsG0580026703.01.T01 MTR_0219s0080 77.311 119 26 1 1 119 1 118 3.17e-58 187
MsG0580026703.01.T01 MTR_2g030885 70.370 135 40 0 1 135 1 135 1.68e-57 197
MsG0580026703.01.T01 MTR_3g110070 76.667 120 27 1 1 119 1 120 3.05e-57 185
MsG0580026703.01.T01 MTR_3g434990 68.382 136 41 2 1 134 15 150 5.04e-56 182
MsG0580026703.01.T01 MTR_3g072200 51.570 223 87 5 2 223 8 210 6.55e-56 193
MsG0580026703.01.T01 MTR_4g048540 69.925 133 32 2 232 356 285 417 3.46e-54 186
MsG0580026703.01.T01 MTR_8g040220 55.263 152 67 1 268 419 70 220 5.94e-54 179
MsG0580026703.01.T01 MTR_8g059020 76.786 112 25 1 1 111 92 203 1.00e-52 177
MsG0580026703.01.T01 MTR_4g124655 91.111 90 8 0 336 425 64 153 2.44e-52 172
MsG0580026703.01.T01 MTR_5g006100 41.026 273 148 4 1 268 1 265 9.08e-52 185
MsG0580026703.01.T01 MTR_3g022185 62.000 150 10 1 276 425 1 103 1.48e-51 169
MsG0580026703.01.T01 MTR_3g005107 93.103 87 6 0 339 425 29 115 4.65e-51 168
MsG0580026703.01.T01 MTR_2g026585 44.726 237 100 4 2 238 8 213 6.91e-51 176
MsG0580026703.01.T01 MTR_3g077875 46.734 199 101 2 42 238 64 259 1.25e-50 173
MsG0580026703.01.T01 MTR_3g462670 39.493 276 113 4 1 273 1 225 4.53e-50 169
MsG0580026703.01.T01 MTR_4g033145 93.023 86 6 0 339 424 4 89 2.94e-49 162
MsG0580026703.01.T01 MTR_0794s0010 90.698 86 8 0 339 424 4 89 3.23e-48 160
MsG0580026703.01.T01 MTR_0116s0070 92.593 81 6 0 345 425 3 83 2.42e-47 157
MsG0580026703.01.T01 MTR_5g046160 39.004 241 132 1 51 291 32 257 1.23e-46 161
MsG0580026703.01.T01 MTR_6g007833 80.412 97 19 0 1 97 1 97 2.97e-46 158
MsG0580026703.01.T01 MTR_4g051612 68.807 109 34 0 27 135 43 151 1.41e-45 157
MsG0580026703.01.T01 MTR_4g051612 86.667 60 8 0 366 425 149 208 7.13e-25 101
MsG0580026703.01.T01 MTR_1g081740 45.327 214 86 4 2 215 7 189 1.44e-45 156
MsG0580026703.01.T01 MTR_3g014480 54.167 144 64 2 268 410 200 342 3.90e-45 160
MsG0580026703.01.T01 MTR_0156s0040 47.701 174 89 1 103 274 1 174 7.30e-45 154
MsG0580026703.01.T01 MTR_2g101530 63.551 107 39 0 319 425 1 107 5.90e-44 150
MsG0580026703.01.T01 MTR_5g098640 64.912 114 40 0 1 114 1 114 6.65e-44 151
MsG0580026703.01.T01 MTR_5g098640 53.165 79 22 1 347 425 114 177 1.60e-15 74.7
MsG0580026703.01.T01 MTR_3g467720 90.909 77 7 0 142 218 63 139 5.56e-43 148
MsG0580026703.01.T01 MTR_3g467720 69.355 62 13 1 1 62 7 62 1.40e-18 82.4
MsG0580026703.01.T01 MTR_5g413325 63.077 130 45 1 296 425 406 532 1.81e-41 154
MsG0580026703.01.T01 MTR_4g051638 52.318 151 69 3 25 174 91 239 4.91e-41 146
MsG0580026703.01.T01 MTR_3g032550 52.518 139 64 2 268 405 276 413 8.52e-41 150
MsG0580026703.01.T01 MTR_4g120790 38.528 231 109 4 20 248 24 223 2.57e-40 144
MsG0580026703.01.T01 MTR_3g034840 40.566 212 113 5 1 200 1 211 2.08e-39 141
MsG0580026703.01.T01 MTR_0599s0020 40.566 212 113 5 1 200 1 211 2.08e-39 141
MsG0580026703.01.T01 MTR_1g075080 91.781 73 6 0 353 425 48 120 2.24e-39 137
MsG0580026703.01.T01 MTR_7g050385 51.333 150 70 3 25 173 82 229 5.00e-39 140
MsG0580026703.01.T01 MTR_2g067720 77.011 87 19 1 37 122 32 118 1.18e-38 136
MsG0580026703.01.T01 MTR_1g058140 55.039 129 58 0 107 235 78 206 2.03e-38 139
MsG0580026703.01.T01 MTR_3g087440 42.784 194 100 4 20 203 32 224 2.99e-38 138
MsG0580026703.01.T01 MTR_2g067930 42.731 227 98 4 1 226 1 196 7.31e-38 136
MsG0580026703.01.T01 MTR_1g015680 89.744 78 8 0 348 425 437 514 1.35e-37 143
MsG0580026703.01.T01 MTR_5g037560 53.383 133 54 3 232 357 24 155 4.75e-37 134
MsG0580026703.01.T01 MTR_8g038805 43.784 185 49 5 1 183 1 132 4.89e-37 132
MsG0580026703.01.T01 MTR_8g017510 48.344 151 72 3 269 418 82 227 6.51e-37 135
MsG0580026703.01.T01 MTR_2g105460 69.231 104 26 1 3 106 40 137 6.96e-37 142
MsG0580026703.01.T01 MTR_2g105460 63.934 61 22 0 223 283 138 198 2.12e-15 78.6
MsG0580026703.01.T01 MTR_7g069450 43.243 148 78 3 268 410 412 558 2.38e-36 140
MsG0580026703.01.T01 MTR_4g019660 73.077 78 21 0 332 409 51 128 4.60e-36 129
MsG0580026703.01.T01 MTR_6g464570 46.479 142 68 4 55 190 10 149 2.52e-35 128
MsG0580026703.01.T01 MTR_1g064700 46.711 152 75 3 268 418 44 190 2.97e-35 129
MsG0580026703.01.T01 MTR_4g113170 56.881 109 46 1 268 376 568 675 3.04e-35 138
MsG0580026703.01.T01 MTR_4g113170 55.556 90 40 0 134 223 72 161 1.47e-22 100
MsG0580026703.01.T01 MTR_7g065910 40.526 190 102 2 96 283 26 206 6.70e-35 133
MsG0580026703.01.T01 MTR_5g060540 43.684 190 79 4 23 211 8 170 1.99e-34 132
MsG0580026703.01.T01 MTR_3g437080 64.045 89 31 1 268 356 85 172 5.44e-34 125
MsG0580026703.01.T01 MTR_4g132765 48.026 152 73 3 268 418 874 1020 5.91e-34 135
MsG0580026703.01.T01 MTR_4g132765 31.023 303 121 10 1 283 186 420 2.60e-22 100
MsG0580026703.01.T01 MTR_8g445570 62.745 102 37 1 126 227 6 106 7.65e-34 122
MsG0580026703.01.T01 MTR_7g050365 52.273 132 39 1 109 240 20 127 1.42e-33 125
MsG0580026703.01.T01 MTR_6g026910 41.573 178 68 1 106 283 60 201 1.69e-33 126
MsG0580026703.01.T01 MTR_8g446690 36.715 207 108 7 189 395 24 207 4.04e-33 126
MsG0580026703.01.T01 MTR_1g101180 37.949 195 90 4 234 419 145 317 1.01e-32 126
MsG0580026703.01.T01 MTR_1g059880 44.720 161 58 3 2 161 44 174 1.34e-32 122
MsG0580026703.01.T01 MTR_8g028020 49.593 123 62 0 152 274 1 123 1.60e-32 120
MsG0580026703.01.T01 MTR_3g030230 59.223 103 42 0 101 203 69 171 1.63e-32 121
MsG0580026703.01.T01 MTR_2g461120 45.985 137 65 4 266 400 83 212 2.08e-32 122
MsG0580026703.01.T01 MTR_6g035400 39.175 194 103 5 234 418 254 441 2.65e-31 124
MsG0580026703.01.T01 MTR_6g084230 45.638 149 75 3 268 415 81 224 3.13e-31 122
MsG0580026703.01.T01 MTR_7g106560 56.481 108 47 0 134 241 91 198 3.61e-31 118
MsG0580026703.01.T01 MTR_7g010970 41.935 155 59 3 108 260 6 131 4.86e-31 119
MsG0580026703.01.T01 MTR_3g022615 69.880 83 24 1 1 82 52 134 6.51e-31 115
MsG0580026703.01.T01 MTR_1g012760 37.097 186 112 3 44 228 20 201 1.64e-30 119
MsG0580026703.01.T01 MTR_1g012760 37.097 186 112 3 44 228 31 212 3.05e-30 118
MsG0580026703.01.T01 MTR_7g024793 56.383 94 40 1 268 361 132 224 5.56e-30 116
MsG0580026703.01.T01 MTR_3g437000 50.388 129 55 3 13 140 3 123 5.78e-30 113
MsG0580026703.01.T01 MTR_6g452470 67.470 83 26 1 1 82 122 204 6.19e-30 115
MsG0580026703.01.T01 MTR_2g461930 46.358 151 57 4 232 375 153 286 1.68e-29 117
MsG0580026703.01.T01 MTR_0325s0020 55.789 95 41 1 286 380 114 207 1.69e-29 120
MsG0580026703.01.T01 MTR_6g090600 52.941 102 48 0 77 178 1 102 1.73e-29 110
MsG0580026703.01.T01 MTR_8g463970 100.000 48 0 0 262 309 86 133 2.35e-29 111
MsG0580026703.01.T01 MTR_2g061890 43.226 155 80 4 267 418 224 373 2.35e-29 118
MsG0580026703.01.T01 MTR_2g090505 29.911 224 152 2 59 278 83 305 6.89e-29 115
MsG0580026703.01.T01 MTR_7g004990 44.444 144 74 3 276 418 1 139 1.11e-28 110
MsG0580026703.01.T01 MTR_2g026620 64.368 87 23 2 233 311 137 223 7.83e-28 112
MsG0580026703.01.T01 MTR_2g026620 91.304 46 4 0 371 416 224 269 3.54e-18 84.7
MsG0580026703.01.T01 MTR_4g100470 42.308 130 66 1 128 257 79 199 8.91e-28 109
MsG0580026703.01.T01 MTR_2g461140 37.640 178 73 6 47 219 33 177 1.90e-27 108
MsG0580026703.01.T01 MTR_3g455770 75.714 70 16 1 1 69 7 76 7.98e-27 103
MsG0580026703.01.T01 MTR_2g067910 52.475 101 48 0 319 419 1 101 9.53e-27 104
MsG0580026703.01.T01 MTR_1g099140 28.740 254 163 4 65 304 89 338 1.91e-26 112
MsG0580026703.01.T01 MTR_5g079560 39.773 176 97 4 42 211 60 232 1.99e-26 107
MsG0580026703.01.T01 MTR_0632s0010 46.491 114 61 0 161 274 5 118 2.60e-26 103
MsG0580026703.01.T01 MTR_1g081020 80.328 61 12 0 1 61 32 92 5.11e-26 101
MsG0580026703.01.T01 MTR_4g048360 73.846 65 17 0 1 65 1 65 6.07e-26 101
MsG0580026703.01.T01 MTR_6g029530 34.653 202 111 4 42 223 469 669 6.15e-26 110
MsG0580026703.01.T01 MTR_8g468040 42.177 147 82 2 266 412 400 543 9.97e-26 109
MsG0580026703.01.T01 MTR_5g030790 64.103 78 28 0 1 78 31 108 1.08e-25 100
MsG0580026703.01.T01 MTR_7g064870 36.517 178 92 5 1 175 1 160 2.30e-25 102
MsG0580026703.01.T01 MTR_7g056013 36.788 193 84 5 234 418 333 495 3.77e-25 107
MsG0580026703.01.T01 MTR_4g049670 41.566 166 57 3 1 165 1 127 7.38e-25 99.4
MsG0580026703.01.T01 MTR_8g464140 54.054 111 47 2 318 426 238 346 1.20e-24 104
MsG0580026703.01.T01 MTR_8g465250 60.317 63 25 0 318 380 1 63 3.15e-24 97.4
MsG0580026703.01.T01 MTR_7g055617 73.913 69 18 0 1 69 1 69 3.32e-24 102
MsG0580026703.01.T01 MTR_7g055617 53.947 76 25 2 233 299 210 284 1.58e-14 73.9
MsG0580026703.01.T01 MTR_1g024995 72.308 65 12 1 1 65 14 72 1.56e-23 94.7
MsG0580026703.01.T01 MTR_1g043440 43.182 132 59 2 145 272 173 292 2.53e-23 99.8
MsG0580026703.01.T01 MTR_7g057800 43.846 130 64 2 1 121 1 130 4.17e-23 98.2
MsG0580026703.01.T01 MTR_7g057800 42.742 124 62 2 12 126 133 256 2.45e-21 93.2
MsG0580026703.01.T01 MTR_2g451070 45.161 124 59 3 1 123 7 122 4.30e-23 94.4
MsG0580026703.01.T01 MTR_3g087410 37.629 194 94 8 234 418 120 295 8.02e-23 98.2
MsG0580026703.01.T01 MTR_5g070810 47.619 105 51 2 78 180 10 112 8.14e-23 93.2
MsG0580026703.01.T01 MTR_0528s0010 35.556 135 86 1 112 246 1 134 1.64e-22 93.2
MsG0580026703.01.T01 MTR_6g077970 80.000 55 10 1 22 75 44 98 3.56e-22 90.9
MsG0580026703.01.T01 MTR_2g023130 27.386 241 128 3 59 296 24 220 5.26e-22 94.4
MsG0580026703.01.T01 MTR_2g073060 49.474 95 43 1 37 126 74 168 6.25e-22 92.4
MsG0580026703.01.T01 MTR_3g116710 32.515 163 105 2 53 211 72 233 8.43e-22 94.4
MsG0580026703.01.T01 MTR_8g037210 43.089 123 50 1 152 274 1 103 3.03e-21 92.8
MsG0580026703.01.T01 MTR_4g066090 52.874 87 40 1 137 223 68 153 3.06e-21 90.1
MsG0580026703.01.T01 MTR_4g088830 45.833 96 51 1 316 410 5 100 5.07e-21 88.2
MsG0580026703.01.T01 MTR_7g024830 62.687 67 25 0 161 227 1 67 6.10e-21 86.7
MsG0580026703.01.T01 MTR_1g080040 47.115 104 53 1 108 209 5 108 3.10e-20 87.0
MsG0580026703.01.T01 MTR_5g032220 26.699 206 130 3 59 260 71 259 6.14e-20 92.4
MsG0580026703.01.T01 MTR_5g032220 39.796 98 56 3 268 364 397 492 9.43e-13 70.1
MsG0580026703.01.T01 MTR_0360s0020 67.692 65 15 1 1 65 24 82 1.18e-19 83.6
MsG0580026703.01.T01 MTR_7g056020 28.216 241 147 4 59 296 383 600 2.45e-19 90.9
MsG0580026703.01.T01 MTR_8g016360 38.211 123 70 4 55 173 13 133 5.74e-19 83.2
MsG0580026703.01.T01 MTR_7g034570 38.793 116 63 1 102 217 74 181 5.91e-19 84.7
MsG0580026703.01.T01 MTR_5g039360 48.864 88 44 1 267 354 82 168 1.02e-18 83.6
MsG0580026703.01.T01 MTR_5g053380 67.742 62 20 0 1 62 1 62 1.17e-18 80.9
MsG0580026703.01.T01 MTR_5g060510 43.333 150 60 3 25 174 41 165 3.37e-18 82.0
MsG0580026703.01.T01 MTR_4g099080 80.435 46 9 0 3 48 9 54 8.36e-18 77.4
MsG0580026703.01.T01 MTR_7g095760 32.447 188 88 7 230 408 131 288 3.42e-17 82.0
MsG0580026703.01.T01 MTR_4g051890 58.065 62 26 0 152 213 1 62 6.02e-17 75.1
MsG0580026703.01.T01 MTR_3g045850 34.868 152 85 4 1 139 1 151 6.74e-17 77.8
MsG0580026703.01.T01 MTR_8g446840 61.404 57 22 0 146 202 23 79 9.14e-17 75.5
MsG0580026703.01.T01 MTR_1g081010 65.625 64 16 2 240 302 295 353 1.11e-16 81.3
MsG0580026703.01.T01 MTR_3g463860 38.462 104 59 3 269 371 47 146 1.44e-16 78.2
MsG0580026703.01.T01 MTR_1g103800 92.105 38 3 0 262 299 323 360 2.39e-16 80.5
MsG0580026703.01.T01 MTR_1g072340 68.421 57 18 0 1 57 34 90 2.98e-16 73.9
MsG0580026703.01.T01 MTR_5g046145 33.775 151 90 3 65 211 125 269 3.66e-16 80.1
MsG0580026703.01.T01 MTR_5g015710 43.519 108 56 2 42 147 62 166 9.05e-16 76.3
MsG0580026703.01.T01 MTR_1g075420 44.681 94 48 2 42 135 25 114 1.17e-15 73.9
MsG0580026703.01.T01 MTR_5g072970 33.333 114 69 1 133 246 35 141 1.71e-15 77.0
MsG0580026703.01.T01 MTR_6g086765 45.055 91 32 5 268 356 164 238 2.70e-15 75.9
MsG0580026703.01.T01 MTR_0700s0010 47.674 86 41 1 333 418 60 141 3.42e-15 72.8
MsG0580026703.01.T01 MTR_4g050580 50.649 77 32 2 234 310 40 110 4.43e-15 71.6
MsG0580026703.01.T01 MTR_2g027000 30.000 160 89 3 86 223 17 175 4.81e-15 73.6
MsG0580026703.01.T01 MTR_1g075860 48.837 86 40 2 49 130 37 122 5.97e-15 71.6
MsG0580026703.01.T01 MTR_4g066180 50.000 78 35 1 336 413 92 165 7.56e-15 72.4
MsG0580026703.01.T01 MTR_5g055912 58.824 51 21 0 134 184 10 60 1.40e-14 68.6
MsG0580026703.01.T01 MTR_2g436740 48.529 68 34 1 266 333 144 210 2.45e-14 72.0
MsG0580026703.01.T01 MTR_3g104445 41.379 87 50 1 268 354 26 111 4.77e-14 68.6
MsG0580026703.01.T01 MTR_6g065450 76.596 47 5 1 1 47 93 133 1.56e-13 68.6
MsG0580026703.01.T01 MTR_2g067620 29.677 155 90 2 106 260 1 136 1.91e-13 72.8
MsG0580026703.01.T01 MTR_5g071980 47.368 95 42 2 3 97 9 95 2.37e-13 70.5
MsG0580026703.01.T01 MTR_1g036180 28.796 191 106 7 182 361 159 330 2.85e-13 71.2
MsG0580026703.01.T01 MTR_1g043340 50.000 70 33 2 150 219 3 70 3.07e-13 65.9
MsG0580026703.01.T01 MTR_3g074010 79.487 39 8 0 27 65 6 44 3.15e-13 65.1
MsG0580026703.01.T01 MTR_3g007220 54.237 59 27 0 161 219 1 59 3.64e-13 65.9
MsG0580026703.01.T01 MTR_1g111720 38.235 102 60 3 271 371 1 100 5.29e-13 66.2
MsG0580026703.01.T01 MTR_8g465330 38.095 105 60 2 269 369 175 278 9.37e-13 69.3
MsG0580026703.01.T01 MTR_1g057190 48.333 60 30 1 331 390 70 128 2.76e-12 64.3
MsG0580026703.01.T01 MTR_6g452940 48.052 77 30 2 349 425 5 71 3.31e-12 62.0
MsG0580026703.01.T01 MTR_1g057380 54.098 61 28 0 1 61 17 77 4.27e-12 62.0
MsG0580026703.01.T01 MTR_6g084295 43.662 71 39 1 297 367 3 72 6.01e-12 62.4
MsG0580026703.01.T01 MTR_8g467980 44.928 69 38 0 65 133 76 144 6.25e-12 63.5
MsG0580026703.01.T01 MTR_6g084740 44.211 95 45 2 3 97 9 95 1.13e-11 63.2
MsG0580026703.01.T01 MTR_3g044770 57.143 56 22 2 267 321 238 292 2.27e-11 64.7
MsG0580026703.01.T01 MTR_3g058780 45.679 81 43 1 1 80 1 81 5.15e-11 65.5
MsG0580026703.01.T01 MTR_4g014760 40.678 59 34 1 319 376 1 59 5.79e-11 59.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score

Find 104 sgRNAs with CRISPR-Local

Find 132 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTTTGACATCTCCGGAAATT+TGG 0.189570 5:+42631332 None:intergenic
CATTCTTGCCGGTAGATTAA+AGG 0.261935 5:-42630879 MsG0580026703.01.T01:CDS
TCGGGAGTGTCCAACAAAAT+AGG 0.277733 5:+42630151 None:intergenic
GACTTGGGAAGATGAGTATT+TGG 0.284485 5:-42630260 MsG0580026703.01.T01:CDS
TGGGGATTGAACATTCTTAA+TGG 0.302650 5:-42630941 MsG0580026703.01.T01:CDS
AAGTGTATCAAAATATTTCT+TGG 0.307634 5:+42630809 None:intergenic
CGAGAACGCGGAAGATGTTT+CGG 0.323053 5:-42631377 MsG0580026703.01.T01:CDS
ATAACTTCAAATTGTTGCTT+TGG 0.334759 5:+42630124 None:intergenic
TCACACACTAGGCGCAATAT+TGG 0.336242 5:+42631079 None:intergenic
CTTGTTAATTGCCAAGTGAT+TGG 0.340867 5:+42630062 None:intergenic
CGAAACATCTTCCGCGTTCT+CGG 0.346065 5:+42631378 None:intergenic
TTTCAATAGCCATGAGCTTT+CGG 0.371737 5:+42630221 None:intergenic
GGCGGTGGTGGCCCTCTTAG+TGG 0.385529 5:+42630415 None:intergenic
GCGATGGAGCCGGCTTTAGA+AGG 0.393797 5:-42630905 MsG0580026703.01.T01:CDS
TAAATAAGCACAAAGTGATT+AGG 0.394180 5:+42630352 None:intergenic
TTAGAAGGACACATTCTTGC+CGG 0.400329 5:-42630890 MsG0580026703.01.T01:CDS
AAACTCCCATCATGTGCCTT+GGG 0.409389 5:-42630381 MsG0580026703.01.T01:CDS
ACGGAAGCTCCATCAATGTT+TGG 0.409660 5:+42631289 None:intergenic
GAGAACGCGGAAGATGTTTC+GGG 0.416442 5:-42631376 MsG0580026703.01.T01:CDS
TCTTGGAAGCACCTTGCTCT+TGG 0.421599 5:+42630826 None:intergenic
AAACCGAAGCATGCGACAAC+GGG 0.422027 5:-42631025 MsG0580026703.01.T01:CDS
ACTAAGAGGGCCACCACCGC+CGG 0.426055 5:-42630413 MsG0580026703.01.T01:CDS
GCTTGAAGTGGGACGACACC+GGG 0.429884 5:+42631238 None:intergenic
GAGCCCGTTGTCGCATGCTT+CGG 0.432909 5:+42631022 None:intergenic
AAGTACGCAAACAAAGGAAT+GGG 0.435440 5:-42630960 MsG0580026703.01.T01:CDS
GTCATCCTCCTTTAATCTAC+CGG 0.444072 5:+42630871 None:intergenic
CAAGATAGAGAAGAATTGCT+TGG 0.447261 5:-42631169 MsG0580026703.01.T01:CDS
AGAAACAAGATGCGGTGACT+TGG 0.449701 5:-42630276 MsG0580026703.01.T01:CDS
GCAATATCTAATCTCGAAGT+TGG 0.455480 5:-42630690 MsG0580026703.01.T01:CDS
CAAACCGCCAAAACCACAAA+AGG 0.456752 5:-42630191 MsG0580026703.01.T01:CDS
GCAACAATGTGCCCCATGTC+CGG 0.459768 5:+42630505 None:intergenic
GAAGTCAAACCAAACATTGA+TGG 0.468446 5:-42631298 MsG0580026703.01.T01:CDS
CGGAGATGTCAAACCGCCTA+AGG 0.468986 5:-42631323 MsG0580026703.01.T01:CDS
AAGATAGAGAAGAATTGCTT+GGG 0.472957 5:-42631168 MsG0580026703.01.T01:CDS
AAAACTCCCATCATGTGCCT+TGG 0.474260 5:-42630382 MsG0580026703.01.T01:CDS
TTGTTGCCAATTATTACAAA+AGG 0.477852 5:-42630489 MsG0580026703.01.T01:CDS
GTGCTTATTTACTTGAGGAA+TGG 0.481732 5:-42630340 MsG0580026703.01.T01:CDS
GGCTTGAAGTGGGACGACAC+CGG 0.488907 5:+42631237 None:intergenic
ACCTAGCCGTGTCCACTTCG+TGG 0.493906 5:+42631215 None:intergenic
TTTGGTTTGACTTCAACCTT+AGG 0.495330 5:+42631307 None:intergenic
GTGCACATCTTGTTGATAAG+TGG 0.502745 5:-42630537 MsG0580026703.01.T01:CDS
CTTGATCTTCTCCAATCACT+TGG 0.503558 5:-42630073 MsG0580026703.01.T01:CDS
GCGGTGGTGGCCCTCTTAGT+GGG 0.507344 5:+42630416 None:intergenic
GGGTGCTTGTTCATGATTAG+TGG 0.512698 5:-42630989 MsG0580026703.01.T01:CDS
CTTAGGCGGTTTGACATCTC+CGG 0.513746 5:+42631324 None:intergenic
TCCACTTCGTGGGCTTGAAG+TGG 0.514367 5:+42631226 None:intergenic
TCCGTAGATGATGGAGGTAG+TGG 0.516953 5:+42630313 None:intergenic
AAAACCGAAGCATGCGACAA+CGG 0.517435 5:-42631026 MsG0580026703.01.T01:CDS
GAAACAAGATGCGGTGACTT+GGG 0.519415 5:-42630275 MsG0580026703.01.T01:CDS
ACTTTGTGCTTATTTACTTG+AGG 0.522470 5:-42630345 MsG0580026703.01.T01:CDS
TGTTACACAAAGATCAAGCT+TGG 0.527058 5:-42631107 MsG0580026703.01.T01:CDS
CTAAGAGGGCCACCACCGCC+GGG 0.529045 5:-42630412 MsG0580026703.01.T01:CDS
AAGCTCATGGCTATTGAAAG+TGG 0.534824 5:-42630217 MsG0580026703.01.T01:CDS
AAAGTACGCAAACAAAGGAA+TGG 0.536075 5:-42630961 MsG0580026703.01.T01:CDS
TCACAACCATGCGATGGAGC+CGG 0.543669 5:-42630915 MsG0580026703.01.T01:CDS
TGAGTTGTTCCGAAAGCTCA+TGG 0.549234 5:-42630230 MsG0580026703.01.T01:CDS
AATTACCCCAAGGCACATGA+TGG 0.552334 5:+42630375 None:intergenic
CCCACGAAGTGGACACGGCT+AGG 0.556465 5:-42631216 MsG0580026703.01.T01:CDS
CTAAAGCCGGCTCCATCGCA+TGG 0.558703 5:+42630909 None:intergenic
TCCACTACCTCCATCATCTA+CGG 0.560036 5:-42630314 MsG0580026703.01.T01:CDS
ATATCTAATCTCGAAGTTGG+AGG 0.561182 5:-42630687 MsG0580026703.01.T01:CDS
GCAACAATTTGAAGTTATTG+CGG 0.563022 5:-42630119 MsG0580026703.01.T01:CDS
CGTTGTCAAGCAAACAAGGC+GGG 0.563100 5:-42631139 MsG0580026703.01.T01:CDS
GTGTTGACAAATCTTGAAGT+TGG 0.564212 5:-42630457 MsG0580026703.01.T01:CDS
AGAATGTGTCCTTCTAAAGC+CGG 0.567631 5:+42630896 None:intergenic
ACACTAGGCGCAATATTGGA+TGG 0.574037 5:+42631083 None:intergenic
TTTAGAAGCTTCAACATGGA+CGG 0.576924 5:+42631270 None:intergenic
GGTACGTTGTCAAGCAAACA+AGG 0.577298 5:-42631143 MsG0580026703.01.T01:CDS
CCACTTCGTGGGCTTGAAGT+GGG 0.578731 5:+42631227 None:intergenic
TTGTGCCACTCCGTAGATGA+TGG 0.579212 5:+42630304 None:intergenic
TGAAGTTATTGCGGAAGATG+AGG 0.582048 5:-42630110 MsG0580026703.01.T01:CDS
CCTAGCCGTGTCCACTTCGT+GGG 0.585282 5:+42631216 None:intergenic
TTCGAGATTAGATATTGCAA+CGG 0.592456 5:+42630695 None:intergenic
AACTCCCATCATGTGCCTTG+GGG 0.594021 5:-42630380 MsG0580026703.01.T01:CDS
CAACGGGCTCAAGAAAATGC+GGG 0.598810 5:-42631009 MsG0580026703.01.T01:CDS
TATTGCGCCTAGTGTGTGAA+AGG 0.599497 5:-42631075 MsG0580026703.01.T01:CDS
GGTTTGACTTCAACCTTAGG+CGG 0.602922 5:+42631310 None:intergenic
GCTTCTAAATATGTTAGCCC+CGG 0.605616 5:-42631256 MsG0580026703.01.T01:CDS
ATTACCCCAAGGCACATGAT+GGG 0.610531 5:+42630376 None:intergenic
CATATTTAGAAGCTTCAACA+TGG 0.611110 5:+42631266 None:intergenic
TAGAGAAGAATTGCTTGGGT+GGG 0.612800 5:-42631164 MsG0580026703.01.T01:CDS
TATAGTAATGACCGAGAACG+CGG 0.612880 5:-42631389 None:intergenic
CTCCACTCCTTTCACACACT+AGG 0.613496 5:+42631068 None:intergenic
TGGAGTTCACAACCATGCGA+TGG 0.616718 5:-42630921 MsG0580026703.01.T01:CDS
TCAAGCCCACGAAGTGGACA+CGG 0.617844 5:-42631221 MsG0580026703.01.T01:CDS
CCCACTTCAAGCCCACGAAG+TGG 0.620403 5:-42631227 MsG0580026703.01.T01:CDS
AAAATATGGAAGGCAAATAG+GGG 0.625454 5:-42630728 MsG0580026703.01.T01:CDS
ATAGAGAAGAATTGCTTGGG+TGG 0.626808 5:-42631165 MsG0580026703.01.T01:CDS
TCTTGCCGGTAGATTAAAGG+AGG 0.642088 5:-42630876 MsG0580026703.01.T01:CDS
TTCACATTTGTCATGCAATG+TGG 0.642856 5:+42630773 None:intergenic
ACTTATTACTCAAGAACACA+TGG 0.643139 5:-42630653 MsG0580026703.01.T01:CDS
ACATGACTTGACCAAGAGCA+AGG 0.648379 5:-42630837 MsG0580026703.01.T01:CDS
CGCCTAGTGTGTGAAAGGAG+TGG 0.648821 5:-42631070 MsG0580026703.01.T01:CDS
ATATCAAAGTACGCAAACAA+AGG 0.650764 5:-42630966 MsG0580026703.01.T01:CDS
ACAACGGGCTCAAGAAAATG+CGG 0.666976 5:-42631010 MsG0580026703.01.T01:CDS
CAATTATTACAAAAGGTGTG+TGG 0.675017 5:-42630482 MsG0580026703.01.T01:CDS
CTTGAAGTGGGACGACACCG+GGG 0.682631 5:+42631239 None:intergenic
AGTACGCAAACAAAGGAATG+GGG 0.691993 5:-42630959 MsG0580026703.01.T01:CDS
TACCTCCATCATCTACGGAG+TGG 0.692771 5:-42630309 MsG0580026703.01.T01:CDS
TGCCACTCCGTAGATGATGG+AGG 0.694440 5:+42630307 None:intergenic
ACAAAAGGAATCAAACAAAG+CGG 0.702198 5:-42630176 MsG0580026703.01.T01:CDS
AGTGATTAGGAATTACCCCA+AGG 0.723388 5:+42630365 None:intergenic
CAATCACAAGAAACAAGATG+CGG 0.727174 5:-42630284 MsG0580026703.01.T01:CDS
ACGTTGTCAAGCAAACAAGG+CGG 0.758780 5:-42631140 MsG0580026703.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAGTGTATCAAAATATTTCT+TGG + Chr5:42630642-42630661 None:intergenic 20.0%
!!! CGTTATAACTACATTTTAAA+TGG - Chr5:42630859-42630878 MsG0580026703.01.T01:CDS 20.0%
! AAAAAATATGGAAGGCAAAT+AGG - Chr5:42630718-42630737 MsG0580026703.01.T01:CDS 25.0%
! AAAAATATGGAAGGCAAATA+GGG - Chr5:42630719-42630738 MsG0580026703.01.T01:CDS 25.0%
! ACAATGAACGTCAAAAAATA+TGG - Chr5:42630706-42630725 MsG0580026703.01.T01:CDS 25.0%
! TAAATAAGCACAAAGTGATT+AGG + Chr5:42631099-42631118 None:intergenic 25.0%
! TTGTTGCCAATTATTACAAA+AGG - Chr5:42630959-42630978 MsG0580026703.01.T01:CDS 25.0%
!! ATAACTTCAAATTGTTGCTT+TGG + Chr5:42631327-42631346 None:intergenic 25.0%
!!! AAATTGTTGCTTTGGTTTTT+CGG + Chr5:42631319-42631338 None:intergenic 25.0%
AAAATATGGAAGGCAAATAG+GGG - Chr5:42630720-42630739 MsG0580026703.01.T01:CDS 30.0%
AAGATAGAGAAGAATTGCTT+GGG - Chr5:42630280-42630299 MsG0580026703.01.T01:CDS 30.0%
ACAAAAGGAATCAAACAAAG+CGG - Chr5:42631272-42631291 MsG0580026703.01.T01:CDS 30.0%
ACTTATTACTCAAGAACACA+TGG - Chr5:42630795-42630814 MsG0580026703.01.T01:CDS 30.0%
ACTTTGTGCTTATTTACTTG+AGG - Chr5:42631103-42631122 MsG0580026703.01.T01:CDS 30.0%
ATATCAAAGTACGCAAACAA+AGG - Chr5:42630482-42630501 MsG0580026703.01.T01:CDS 30.0%
CATATTTAGAAGCTTCAACA+TGG + Chr5:42630185-42630204 None:intergenic 30.0%
TGAACGTCAAAAAATATGGA+AGG - Chr5:42630710-42630729 MsG0580026703.01.T01:CDS 30.0%
TTCGAGATTAGATATTGCAA+CGG + Chr5:42630756-42630775 None:intergenic 30.0%
! ACAATCGAAGATATCTTTTG+CGG - Chr5:42630828-42630847 MsG0580026703.01.T01:CDS 30.0%
! CAATTATTACAAAAGGTGTG+TGG - Chr5:42630966-42630985 MsG0580026703.01.T01:CDS 30.0%
! CACACACCTTTTGTAATAAT+TGG + Chr5:42630968-42630987 None:intergenic 30.0%
! CGTAATTTTGTCCAAATTTC+CGG - Chr5:42630105-42630124 MsG0580026703.01.T01:CDS 30.0%
! GCAACAATTTGAAGTTATTG+CGG - Chr5:42631329-42631348 MsG0580026703.01.T01:CDS 30.0%
! TGCACAACTTTTTGTATTTG+CGG + Chr5:42630896-42630915 None:intergenic 30.0%
! TTTGATTCCTTTTGTGGTTT+TGG + Chr5:42631267-42631286 None:intergenic 30.0%
!!! AATCTTTTTTCCCACTAAGA+GGG - Chr5:42631022-42631041 MsG0580026703.01.T01:CDS 30.0%
!!! AATTGTTGCTTTGGTTTTTC+GGG + Chr5:42631318-42631337 None:intergenic 30.0%
AAAGTACGCAAACAAAGGAA+TGG - Chr5:42630487-42630506 MsG0580026703.01.T01:CDS 35.0%
AAGTACGCAAACAAAGGAAT+GGG - Chr5:42630488-42630507 MsG0580026703.01.T01:CDS 35.0%
ATATCTAATCTCGAAGTTGG+AGG - Chr5:42630761-42630780 MsG0580026703.01.T01:CDS 35.0%
CAAGATAGAGAAGAATTGCT+TGG - Chr5:42630279-42630298 MsG0580026703.01.T01:CDS 35.0%
CAATCACAAGAAACAAGATG+CGG - Chr5:42631164-42631183 MsG0580026703.01.T01:CDS 35.0%
GAAGTCAAACCAAACATTGA+TGG - Chr5:42630150-42630169 MsG0580026703.01.T01:CDS 35.0%
GCAATATCTAATCTCGAAGT+TGG - Chr5:42630758-42630777 MsG0580026703.01.T01:CDS 35.0%
GTGCTTATTTACTTGAGGAA+TGG - Chr5:42631108-42631127 MsG0580026703.01.T01:CDS 35.0%
TGGGGATTGAACATTCTTAA+TGG - Chr5:42630507-42630526 MsG0580026703.01.T01:CDS 35.0%
TGTTACACAAAGATCAAGCT+TGG - Chr5:42630341-42630360 MsG0580026703.01.T01:CDS 35.0%
TTCACATTTGTCATGCAATG+TGG + Chr5:42630678-42630697 None:intergenic 35.0%
TTTAGAAGCTTCAACATGGA+CGG + Chr5:42630181-42630200 None:intergenic 35.0%
TTTCAATAGCCATGAGCTTT+CGG + Chr5:42631230-42631249 None:intergenic 35.0%
! CAATCGAAGATATCTTTTGC+GGG - Chr5:42630829-42630848 MsG0580026703.01.T01:CDS 35.0%
! GCACAACTTTTTGTATTTGC+GGG + Chr5:42630895-42630914 None:intergenic 35.0%
! GTGTTGACAAATCTTGAAGT+TGG - Chr5:42630991-42631010 MsG0580026703.01.T01:CDS 35.0%
!! TGATAAGTGGTTGACTTTTC+CGG - Chr5:42630924-42630943 MsG0580026703.01.T01:CDS 35.0%
!! TTTGGTTTGACTTCAACCTT+AGG + Chr5:42630144-42630163 None:intergenic 35.0%
!!! GAATCTTTTTTCCCACTAAG+AGG - Chr5:42631021-42631040 MsG0580026703.01.T01:CDS 35.0%
!!! GCATGCTTCGGTTTTTTTTT+AGG + Chr5:42630417-42630436 None:intergenic 35.0%
!!! GCTTTGTTTGATTCCTTTTG+TGG + Chr5:42631273-42631292 None:intergenic 35.0%
AAGCTCATGGCTATTGAAAG+TGG - Chr5:42631231-42631250 MsG0580026703.01.T01:CDS 40.0%
AGTACGCAAACAAAGGAATG+GGG - Chr5:42630489-42630508 MsG0580026703.01.T01:CDS 40.0%
AGTGATTAGGAATTACCCCA+AGG + Chr5:42631086-42631105 None:intergenic 40.0%
ATAGAGAAGAATTGCTTGGG+TGG - Chr5:42630283-42630302 MsG0580026703.01.T01:CDS 40.0%
CATTCTTGCCGGTAGATTAA+AGG - Chr5:42630569-42630588 MsG0580026703.01.T01:intron 40.0%
CTTGATCTTCTCCAATCACT+TGG - Chr5:42631375-42631394 MsG0580026703.01.T01:CDS 40.0%
GACTTGGGAAGATGAGTATT+TGG - Chr5:42631188-42631207 MsG0580026703.01.T01:CDS 40.0%
GCTTCTAAATATGTTAGCCC+CGG - Chr5:42630192-42630211 MsG0580026703.01.T01:CDS 40.0%
GTCATCCTCCTTTAATCTAC+CGG + Chr5:42630580-42630599 None:intergenic 40.0%
GTTTGACATCTCCGGAAATT+TGG + Chr5:42630119-42630138 None:intergenic 40.0%
TAGAGAAGAATTGCTTGGGT+GGG - Chr5:42630284-42630303 MsG0580026703.01.T01:CDS 40.0%
TGAAGTTATTGCGGAAGATG+AGG - Chr5:42631338-42631357 MsG0580026703.01.T01:CDS 40.0%
TTAGAAGGACACATTCTTGC+CGG - Chr5:42630558-42630577 MsG0580026703.01.T01:intron 40.0%
! CAACTTTTTGTATTTGCGGG+AGG + Chr5:42630892-42630911 None:intergenic 40.0%
! GTGCACATCTTGTTGATAAG+TGG - Chr5:42630911-42630930 MsG0580026703.01.T01:CDS 40.0%
!! AGAATGTGTCCTTCTAAAGC+CGG + Chr5:42630555-42630574 None:intergenic 40.0%
!!! GATTCCTTTTGTGGTTTTGG+CGG + Chr5:42631264-42631283 None:intergenic 40.0%
AAAACCGAAGCATGCGACAA+CGG - Chr5:42630422-42630441 MsG0580026703.01.T01:CDS 45.0%
AAAACTCCCATCATGTGCCT+TGG - Chr5:42631066-42631085 MsG0580026703.01.T01:CDS 45.0%
AAACTCCCATCATGTGCCTT+GGG - Chr5:42631067-42631086 MsG0580026703.01.T01:CDS 45.0%
AATTACCCCAAGGCACATGA+TGG + Chr5:42631076-42631095 None:intergenic 45.0%
ACACTAGGCGCAATATTGGA+TGG + Chr5:42630368-42630387 None:intergenic 45.0%
ACATGACTTGACCAAGAGCA+AGG - Chr5:42630611-42630630 MsG0580026703.01.T01:intron 45.0%
ACGGAAGCTCCATCAATGTT+TGG + Chr5:42630162-42630181 None:intergenic 45.0%
ACGTTGTCAAGCAAACAAGG+CGG - Chr5:42630308-42630327 MsG0580026703.01.T01:CDS 45.0%
AGAAACAAGATGCGGTGACT+TGG - Chr5:42631172-42631191 MsG0580026703.01.T01:CDS 45.0%
ATTACCCCAAGGCACATGAT+GGG + Chr5:42631075-42631094 None:intergenic 45.0%
CAAACCGCCAAAACCACAAA+AGG - Chr5:42631257-42631276 MsG0580026703.01.T01:CDS 45.0%
GAAACAAGATGCGGTGACTT+GGG - Chr5:42631173-42631192 MsG0580026703.01.T01:CDS 45.0%
GGGTGCTTGTTCATGATTAG+TGG - Chr5:42630459-42630478 MsG0580026703.01.T01:CDS 45.0%
GGTACGTTGTCAAGCAAACA+AGG - Chr5:42630305-42630324 MsG0580026703.01.T01:CDS 45.0%
TATTGCGCCTAGTGTGTGAA+AGG - Chr5:42630373-42630392 MsG0580026703.01.T01:CDS 45.0%
TCACACACTAGGCGCAATAT+TGG + Chr5:42630372-42630391 None:intergenic 45.0%
TCCACTACCTCCATCATCTA+CGG - Chr5:42631134-42631153 MsG0580026703.01.T01:CDS 45.0%
TCTTGCCGGTAGATTAAAGG+AGG - Chr5:42630572-42630591 MsG0580026703.01.T01:intron 45.0%
TGAGTTGTTCCGAAAGCTCA+TGG - Chr5:42631218-42631237 MsG0580026703.01.T01:CDS 45.0%
! ACAACGGGCTCAAGAAAATG+CGG - Chr5:42630438-42630457 MsG0580026703.01.T01:CDS 45.0%
! GAAGATATCTTTTGCGGGTG+AGG - Chr5:42630834-42630853 MsG0580026703.01.T01:CDS 45.0%
! GGTTTGACTTCAACCTTAGG+CGG + Chr5:42630141-42630160 None:intergenic 45.0%
!! TCGGGAGTGTCCAACAAAAT+AGG + Chr5:42631300-42631319 None:intergenic 45.0%
!! TGGTTGACTTTTCCGGACAT+GGG - Chr5:42630931-42630950 MsG0580026703.01.T01:CDS 45.0%
!!! ATGGGAGTTTTTTGCTTGCC+CGG + Chr5:42631057-42631076 None:intergenic 45.0%
AAACCGAAGCATGCGACAAC+GGG - Chr5:42630423-42630442 MsG0580026703.01.T01:CDS 50.0%
AACTCCCATCATGTGCCTTG+GGG - Chr5:42631068-42631087 MsG0580026703.01.T01:CDS 50.0%
CGAAACATCTTCCGCGTTCT+CGG + Chr5:42630073-42630092 None:intergenic 50.0%
CGAGAACGCGGAAGATGTTT+CGG - Chr5:42630071-42630090 MsG0580026703.01.T01:CDS 50.0%
CGTTGTCAAGCAAACAAGGC+GGG - Chr5:42630309-42630328 MsG0580026703.01.T01:CDS 50.0%
CTCCACTCCTTTCACACACT+AGG + Chr5:42630383-42630402 None:intergenic 50.0%
CTTAGGCGGTTTGACATCTC+CGG + Chr5:42630127-42630146 None:intergenic 50.0%
GAGAACGCGGAAGATGTTTC+GGG - Chr5:42630072-42630091 MsG0580026703.01.T01:CDS 50.0%
TACCTCCATCATCTACGGAG+TGG - Chr5:42631139-42631158 MsG0580026703.01.T01:CDS 50.0%
TGGAGTTCACAACCATGCGA+TGG - Chr5:42630527-42630546 MsG0580026703.01.T01:CDS 50.0%
! CAAAGCGGCGCCTATTTTGT+TGG - Chr5:42631287-42631306 MsG0580026703.01.T01:CDS 50.0%
! CAACGGGCTCAAGAAAATGC+GGG - Chr5:42630439-42630458 MsG0580026703.01.T01:CDS 50.0%
! TTGTGCCACTCCGTAGATGA+TGG + Chr5:42631147-42631166 None:intergenic 50.0%
!! GGTTGACTTTTCCGGACATG+GGG - Chr5:42630932-42630951 MsG0580026703.01.T01:CDS 50.0%
!! GTGGTTGACTTTTCCGGACA+TGG - Chr5:42630930-42630949 MsG0580026703.01.T01:CDS 50.0%
!! TCCGTAGATGATGGAGGTAG+TGG + Chr5:42631138-42631157 None:intergenic 50.0%
!! TCTTGGAAGCACCTTGCTCT+TGG + Chr5:42630625-42630644 None:intergenic 50.0%
CCACTTCGTGGGCTTGAAGT+GGG + Chr5:42630224-42630243 None:intergenic 55.0%
CGCCTAGTGTGTGAAAGGAG+TGG - Chr5:42630378-42630397 MsG0580026703.01.T01:CDS 55.0%
CGGAGATGTCAAACCGCCTA+AGG - Chr5:42630125-42630144 MsG0580026703.01.T01:CDS 55.0%
GCAACAATGTGCCCCATGTC+CGG + Chr5:42630946-42630965 None:intergenic 55.0%
TCAAGCCCACGAAGTGGACA+CGG - Chr5:42630227-42630246 MsG0580026703.01.T01:CDS 55.0%
TCACAACCATGCGATGGAGC+CGG - Chr5:42630533-42630552 MsG0580026703.01.T01:CDS 55.0%
TCCACTTCGTGGGCTTGAAG+TGG + Chr5:42630225-42630244 None:intergenic 55.0%
! TGCCACTCCGTAGATGATGG+AGG + Chr5:42631144-42631163 None:intergenic 55.0%
!!! GGAGTTTTTTGCTTGCCCGG+CGG + Chr5:42631054-42631073 None:intergenic 55.0%
ACCTAGCCGTGTCCACTTCG+TGG + Chr5:42630236-42630255 None:intergenic 60.0%
CCCACTTCAAGCCCACGAAG+TGG - Chr5:42630221-42630240 MsG0580026703.01.T01:CDS 60.0%
CCTAGCCGTGTCCACTTCGT+GGG + Chr5:42630235-42630254 None:intergenic 60.0%
CTTGAAGTGGGACGACACCG+GGG + Chr5:42630212-42630231 None:intergenic 60.0%
GAGCCCGTTGTCGCATGCTT+CGG + Chr5:42630429-42630448 None:intergenic 60.0%
GCTTGAAGTGGGACGACACC+GGG + Chr5:42630213-42630232 None:intergenic 60.0%
GGCTTGAAGTGGGACGACAC+CGG + Chr5:42630214-42630233 None:intergenic 60.0%
! CTAAAGCCGGCTCCATCGCA+TGG + Chr5:42630542-42630561 None:intergenic 60.0%
!! GCGATGGAGCCGGCTTTAGA+AGG - Chr5:42630543-42630562 MsG0580026703.01.T01:intron 60.0%
!!! GTTTTTTGCTTGCCCGGCGG+TGG + Chr5:42631051-42631070 None:intergenic 60.0%
ACTAAGAGGGCCACCACCGC+CGG - Chr5:42631035-42631054 MsG0580026703.01.T01:CDS 65.0%
CCCACGAAGTGGACACGGCT+AGG - Chr5:42630232-42630251 MsG0580026703.01.T01:CDS 65.0%
! GCGGTGGTGGCCCTCTTAGT+GGG + Chr5:42631035-42631054 None:intergenic 65.0%
! TTTTGCTTGCCCGGCGGTGG+TGG + Chr5:42631048-42631067 None:intergenic 65.0%
CTAAGAGGGCCACCACCGCC+GGG - Chr5:42631036-42631055 MsG0580026703.01.T01:CDS 70.0%
! GGCGGTGGTGGCCCTCTTAG+TGG + Chr5:42631036-42631055 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
Chr5 gene 42630066 42631404 42630066 ID=MsG0580026703.01;Name=MsG0580026703.01
Chr5 mRNA 42630066 42631404 42630066 ID=MsG0580026703.01.T01;Parent=MsG0580026703.01;Name=MsG0580026703.01.T01;_AED=0.56;_eAED=0.56;_QI=0|0|0|1|1|1|2|0|426
Chr5 exon 42630620 42631404 42630620 ID=MsG0580026703.01.T01:exon:18063;Parent=MsG0580026703.01.T01
Chr5 exon 42630066 42630561 42630066 ID=MsG0580026703.01.T01:exon:18062;Parent=MsG0580026703.01.T01
Chr5 CDS 42630620 42631404 42630620 ID=MsG0580026703.01.T01:cds;Parent=MsG0580026703.01.T01
Chr5 CDS 42630066 42630561 42630066 ID=MsG0580026703.01.T01:cds;Parent=MsG0580026703.01.T01
Gene Sequence

>MsG0580026703.01.T01

ATGACCGAGAACGCGGAAGATGTTTCGGGAGAGACAAAACGTAATTTTGTCCAAATTTCCGGAGATGTCAAACCGCCTAAGGTTGAAGTCAAACCAAACATTGATGGAGCTTCCGTCCATGTTGAAGCTTCTAAATATGTTAGCCCCGGTGTCGTCCCACTTCAAGCCCACGAAGTGGACACGGCTAGGTTTTTTTCTAACGACATTAAGTTTCAAGATAGAGAAGAATTGCTTGGGTGGGTACGTTGTCAAGCAAACAAGGCGGGATTTACAATTGTTACACAAAGATCAAGCTTGGTCCATCCAATATTGCGCCTAGTGTGTGAAAGGAGTGGAGCTCACAAAGTGCCTAAAAAAAAACCGAAGCATGCGACAACGGGCTCAAGAAAATGCGGGTGCTTGTTCATGATTAGTGGATATCAAAGTACGCAAACAAAGGAATGGGGATTGAACATTCTTAATGGAGTTCACAACCATGCGATGGAGCCGGCTTTAGAAGGACACATTCTTGCCGGTAGATTAAAGGAGGATGACAAGAAGATTGTACATGACTTGACCAAGAGCAAGGTGCTTCCAAGAAATATTTTGATACACTTGAAGAACAAAAGACCACATTGCATGACAAATGTGAAGCAAGTGTACAATGAACGTCAAAAAATATGGAAGGCAAATAGGGGTGACAAGAAGCCGTTGCAATATCTAATCTCGAAGTTGGAGGAGCACAACTATACTTATTACTCAAGAACACATGGTGAAAGTAATACAATCGAAGATATCTTTTGCGGTTGTGCACATCTTGTTGATAAGTGGTTGACTTTTCCGGACATGGGGCACATTGTTGCCAATTATTACAAAAGGTGTGTGGTTGTGTTGACAAATCTTGAAGTTGGTAACTCAGAATCTTTTTTCCCACTAAGAGGGCCACCACCGCCGGGCAAGCAAAAAACTCCCATCATGTGCCTTGGGGTAATTCCTAATCACTTTGTGCTTATTTACTTGAGGAATGGTTGTCCACTACCTCCATCATCTACGGAGTGGCACAATCACAAGAAACAAGATGCGGTGACTTGGGAAGATGAGTATTTGGATCAACATGAGTTGTTCCGAAAGCTCATGGCTATTGAAAGTGGAAACAAACCGCCAAAACCACAAAAGGAATCAAACAAAGCGGCGCCTATTTTGTTGGACACTCCCGAAAAACCAAAGCAACAATTTGAAGTTATTGCGGAAGATGAGGAAGATTTTATGTCACTTGATCTTCTCCAATCACTTGGCAATTAA
Protein sequence

>MsG0580026703.01.T01

MTENAEDVSGETKRNFVQISGDVKPPKVEVKPNIDGASVHVEASKYVSPGVVPLQAHEVDTARFFSNDIKFQDREELLGWVRCQANKAGFTIVTQRSSLVHPILRLVCERSGAHKVPKKKPKHATTGSRKCGCLFMISGYQSTQTKEWGLNILNGVHNHAMEPALEGHILAGRLKEDDKKIVHDLTKSKVLPRNILIHLKNKRPHCMTNVKQVYNERQKIWKANRGDKKPLQYLISKLEEHNYTYYSRTHGESNTIEDIFCGCAHLVDKWLTFPDMGHIVANYYKRCVVVLTNLEVGNSESFFPLRGPPPPGKQKTPIMCLGVIPNHFVLIYLRNGCPLPPSSTEWHNHKKQDAVTWEDEYLDQHELFRKLMAIESGNKPPKPQKESNKAAPILLDTPEKPKQQFEVIAEDEEDFMSLDLLQSLGN*